BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00055974
         (1433 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacillifo...   126   3e-27
emb|CAD40174.2| OSJNBa0061A09.13 [Oryza sativa Japonica Group]        122   4e-26
gb|KQL11580.1| hypothetical protein SETIT_007835mg [Setaria ital...   122   4e-26
tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacillifo...   122   8e-26
gb|KQL09745.1| hypothetical protein SETIT_008772mg, partial [Set...   121   8e-26
gb|KQL01322.1| hypothetical protein SETIT_015224mg [Setaria ital...   121   1e-25
tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacillifo...   121   1e-25
gb|KQL01323.1| hypothetical protein SETIT_014964mg [Setaria ital...   121   1e-25
gb|ADV58678.1| P194 [Rice tungro bacilliform virus]                   112   8e-23
emb|CAC15488.1| polyprotein [Rice tungro bacilliform virus]           110   1e-22
emb|CAY56550.1| P194 protein [Rice tungro bacilliform virus]          111   3e-22
emb|CAC41321.2| unnamed protein product [Rice tungro bacilliform...   109   1e-21
gb|AFQ62092.1| P194 [Rice tungro bacilliform virus]                   108   2e-21
gb|AAB03094.1| ORF3 [Rice tungro bacilliform virus]                   105   2e-20
dbj|BAA01607.1| 194K polypeptide [Rice tungro bacilliform virus]...   105   2e-20
ref|NP_056762.1| hypothetical protein [Rice tungro bacilliform v...   105   2e-20
gb|AAD30190.1|AF113830_3 polyprotein P194 [Rice tungro bacillifo...   105   2e-20
gb|AAD30194.1|AF113831_3 polyprotein P194 [Rice tungro bacillifo...   105   2e-20
gb|AAD30198.1|AF113832_3 polyprotein P194 [Rice tungro bacillifo...   105   3e-20
gb|AAC27711.1| polyprotein [Rice tungro bacilliform virus]            103   9e-20

>tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1718

 Score =  126 bits (316), Expect = 3e-27
 Identities = 103/360 (28%), Positives = 186/360 (51%), Gaps = 14/360 (3%)
 Frame = -2

Query: 1135 KRNEEKVERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXESVAKE 956
            K   E ++ ++D+ + ++Q   ++   ++ I+ +QIY     +             ++  
Sbjct: 26   KGKNEDIDELEDIAEVDKQLERYQRDTLRAIRPQQIYCMGFFENKNGLYRISREVELSVL 85

Query: 955  DQQLNFKIVEKRKE-------IKYIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTDLGH 797
             + +  KIV K  E        KYIH G+ IIG+KG+ R   G K L+ L D+R   +  
Sbjct: 86   TKPVELKIVAKEFENGLKYSGYKYIHQGMYIIGIKGMTRKKLGAKVLITLLDKRWDTIDK 145

Query: 796  GILGTFEIDMTKNNGEIIYFCPDYLIDAKD-IEYIKIGIKTRGYKFQEGINNLIIRTGFI 620
              LG  E DM +N   I Y  PD ++  K+ I+ +  G +T+GY+  +G  NL++   FI
Sbjct: 146  AALGFLEGDMNENM-LITYIAPDLMMPIKEFIDKMSFGFQTKGYEEFKG-TNLLVSIEFI 203

Query: 619  GKLCTNCNVICNLKSDKNDQIEV--SKGIQAIPGIKYSSEENTGQELNIESFIKTEGKLI 446
            G+L TN +     K + ND IE   SKGI  +  +K SSEE  G+E  I   I+++    
Sbjct: 204  GRL-TNRSA-SKYKINVNDVIENMHSKGITFMSPLKISSEERAGEEWKISDLIESKTLSQ 261

Query: 445  PHNNVMYENPRGSISIRFQDYR-WINDNNETESTLGSIEETDNRMNREKELPEYMSNPDF 269
            P N + Y+N +G+ SIRF +Y+    D+ ETE++  +I +     NR   + E+M   D 
Sbjct: 262  PENYISYQNSKGNTSIRFINYKPRTTDDLETEASDRNIID-----NRRHSVSEFMEKLDQ 316

Query: 268  KFLIAKIKFEKDRILKQVKIIY-DTFKKRYPEATEEIMEY--QIKRVYNINQDTKECIKI 98
            +   ++IK+ +++ LK++   Y ++ K  +P+  ++ + +  ++ RV  + ++    ++I
Sbjct: 317  E---SEIKYYENK-LKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKKNEDMAVEI 372


>emb|CAD40174.2| OSJNBa0061A09.13 [Oryza sativa Japonica Group]
          Length = 1342

 Score =  122 bits (307), Expect = 4e-26
 Identities = 102/360 (28%), Positives = 184/360 (51%), Gaps = 14/360 (3%)
 Frame = -2

Query: 1135 KRNEEKVERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXESVAKE 956
            K  +E ++ ++D+ + ++Q   ++   ++ I+ +QIY                   ++  
Sbjct: 26   KGKKEDIDELEDIAEVDKQLERYQRDTLRAIRPQQIYCMGFFKNKNGLYRISREVELSVL 85

Query: 955  DQQLNFKIVEKRKE-------IKYIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTDLGH 797
             + +  KIV K  E        KYIH G+ IIG+KG+ R     K L+ L D+R   +  
Sbjct: 86   TKPVELKIVAKEFENGLKYSGYKYIHQGMYIIGIKGMTRKKLEAKVLITLLDKRWDTIDK 145

Query: 796  GILGTFEIDMTKNNGEIIYFCPDYLIDAKD-IEYIKIGIKTRGYKFQEGINNLIIRTGFI 620
              LG  E DM +N   I Y  PD ++  K+ I+ +  G +T+GY+  +G  NL++   FI
Sbjct: 146  AALGFLEGDMNENM-LITYIAPDLMMPIKEFIDKMSFGFQTKGYEEFKG-TNLLVSIEFI 203

Query: 619  GKLCTNCNVICNLKSDKNDQIEV--SKGIQAIPGIKYSSEENTGQELNIESFIKTEGKLI 446
            G+L TN +     K + ND IE   SKGI  +  +K SSEE  G+E  I   I+++    
Sbjct: 204  GRL-TNRSA-SKYKINVNDVIENMHSKGITFMSPLKISSEERAGEEWKISDLIESKTLSQ 261

Query: 445  PHNNVMYENPRGSISIRFQDYR-WINDNNETESTLGSIEETDNRMNREKELPEYMSNPDF 269
            P N + Y+N +G+ SIRF +Y+    D+ ETE++     + + R NR   + E+M   D 
Sbjct: 262  PENYISYQNSKGNTSIRFINYKPRTTDDLETEAS-----DRNIRDNRRHSVSEFMEKLDQ 316

Query: 268  KFLIAKIKFEKDRILKQVKIIY-DTFKKRYPEATEEIMEY--QIKRVYNINQDTKECIKI 98
            +   ++IK+ +++ LK++   Y ++ K  +P+   + + +  ++ RV  + ++    ++I
Sbjct: 317  E---SEIKYYENK-LKEINEEYNNSMKCEWPKIRNKELYFYRELARVKKVKKNEDMAVEI 372


>gb|KQL11580.1| hypothetical protein SETIT_007835mg [Setaria italica]
          Length = 897

 Score =  122 bits (306), Expect = 4e-26
 Identities = 101/345 (29%), Positives = 170/345 (49%), Gaps = 14/345 (4%)
 Frame = -2

Query: 1147 MQIFKRNEEKVERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXES 968
            M   K   + +E ++++I+ E+    ++   ++ I+ +QIY+    +             
Sbjct: 27   MDRLKGGCDDIENLEEMIEVERDLERYQRDTLRKIRPQQIYQMGWFENKNGLYRISREVE 86

Query: 967  VAKEDQQLNFKIVEKRKE-------IKYIHLGLIIIGVKGLHRSYQGEKTLVILHDERHT 809
            ++   + +  +IV K+ E        KYIH G+ IIG+KG+ R   G K L+ L D+R  
Sbjct: 87   LSVLTEPVQLRIVSKQFENGLKYSGYKYIHQGMYIIGIKGMTRKKLGTKVLITLLDKRWD 146

Query: 808  DLGHGILGTFEIDMTKNNGEIIYFCPDYLIDAKD-IEYIKIGIKTRGYKFQEGINNLIIR 632
             +    LG  E DM +N   I Y  PD ++  K+ I+ + IG +T+GY+  +G  NL++ 
Sbjct: 147  SVNKAALGFLEGDMNENM-LITYIAPDLIMPIKEFIDKMAIGFQTKGYEDFKG-TNLLVS 204

Query: 631  TGFIGKLCTNCNVICNLKSDKNDQIEV--SKGIQAIPGIKYSSEENTGQELNIESFIKTE 458
              F+G+L TN +     K + N+ IE   SKGI+ +  +K SSEE  G+E NI + I+ +
Sbjct: 205  IEFVGRL-TNRSAT-KYKVNVNNVIESMQSKGIKFMSPLKISSEERAGEEWNISALIEPK 262

Query: 457  GKLIPHNNVMYENPRGSISIRFQDY--RWINDNNETESTLGSIEETDNRMNREKELPEYM 284
                P + V YEN +G  SIRF +Y  R ++D N + S   +IEE      R   + E+M
Sbjct: 263  ILKQPKDYVSYENSKGKTSIRFVNYKERSLDDLNVSTSE-SNIEEA-----RRHSVCEFM 316

Query: 283  SNPDFKFLIAKIKFEKDRILKQ--VKIIYDTFKKRYPEATEEIME 155
               D    I   + +  ++  +    +IY   +K      E + E
Sbjct: 317  EKLDIDNEIKHYEKKLSKVQDEYNTSMIYSRIQKELENNKERVKE 361


>tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1711

 Score =  122 bits (305), Expect = 8e-26
 Identities = 99/353 (28%), Positives = 176/353 (49%), Gaps = 11/353 (3%)
 Frame = -2

Query: 1135 KRNEEKVERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXESVAKE 956
            K   + ++ ++DV + ++Q   ++   ++ I+ +Q+Y     +             ++  
Sbjct: 23   KGKYDDIDELKDVAQVDKQLERYQRDTLRAIRPQQVYCMGFFENKNGLYRISREVELSVL 82

Query: 955  DQQLNFKIVEKRKE-------IKYIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTDLGH 797
             + +  KIV K  E        KYIH G+ IIG+KG+ R   G K L+ L D+R   +  
Sbjct: 83   TKPVELKIVAKEFENSLKYSGYKYIHQGMYIIGIKGMTRKKLGAKVLITLLDKRWDTINK 142

Query: 796  GILGTFEIDMTKNNGEIIYFCPDYLIDAKD-IEYIKIGIKTRGYKFQEGINNLIIRTGFI 620
              LG  E DM +N   I Y  PD ++   + I+ +  G +T+GY+  +G  NL+I   FI
Sbjct: 143  ASLGYLEGDMNENM-LITYIAPDLMMPVNEFIDKMSFGFQTKGYEEFKG-TNLLISIEFI 200

Query: 619  GKLCTNCNVICNLKSDKNDQIEV--SKGIQAIPGIKYSSEENTGQELNIESFIKTEGKLI 446
            G+L TN +     K + ND IE   SKGI+ +  +   SEE  G++  I  FIK +    
Sbjct: 201  GRL-TNRSA-SKYKINVNDVIEKMHSKGIKFMSPLXIDSEERAGEKWPISEFIKNKTLSQ 258

Query: 445  PHNNVMYENPRGSISIRFQDYRW-INDNNETESTLGSIEETDNRMNREKELPEYMSNPDF 269
            P N + Y++ +G++SIRF +Y+   +D+ + ES+   I   DNR +   EL E + +   
Sbjct: 259  PENFISYQDSKGNVSIRFTNYKTRASDDLDAESSDRBI--IDNRRHSISELMEKLDHE-- 314

Query: 268  KFLIAKIKFEKDRILKQVKIIYDTFKKRYPEATEEIMEYQIKRVYNINQDTKE 110
                ++IK+ +D++        ++ K  +P+  ++ + Y  + +  I +  KE
Sbjct: 315  ----SEIKYYEDKLRDIADEYNNSMKSEWPKIRDKEL-YFYRELSRIKKQKKE 362


>gb|KQL09745.1| hypothetical protein SETIT_008772mg, partial [Setaria italica]
          Length = 898

 Score =  121 bits (304), Expect = 8e-26
 Identities = 106/360 (29%), Positives = 174/360 (48%), Gaps = 14/360 (3%)
 Frame = -2

Query: 1147 MQIFKRNEEKVERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXES 968
            M   K   + +E ++++I  E+    ++   ++ I+ +QIY+    +             
Sbjct: 27   MDRLKGGCDDIENLEEMIDVERDLERYQRDTLRKIRPQQIYQMGWFENKNRLYRISREVE 86

Query: 967  VAKEDQQLNFKIVEKRKE-------IKYIHLGLIIIGVKGLHRSYQGEKTLVILHDERHT 809
            ++   + +  +IV K+ E        KYIH G+ IIG+KG+ R   G K L+ L D+R  
Sbjct: 87   LSVLTEPVQLRIVSKQFENGLKYSGYKYIHQGMYIIGIKGMTRKKLGTKVLITLLDKRWD 146

Query: 808  DLGHGILGTFEIDMTKNNGEIIYFCPDYLIDAKD-IEYIKIGIKTRGYKFQEGINNLIIR 632
             +    LG  E DM +N   I Y  PD ++  K+ I+ + IG +T+GY+  +G  NL++ 
Sbjct: 147  SVNKAALGFLEGDMNENM-LITYIAPDLIMPIKEFIDKMAIGFQTKGYEDFKG-TNLLVS 204

Query: 631  TGFIGKLCTNCNVICNLKSDKNDQIEV--SKGIQAIPGIKYSSEENTGQELNIESFIKTE 458
              F+G+L TN +     K + N+ IE   SKGI+ +  +K SSEE  G+E NI + I+ +
Sbjct: 205  IEFVGRL-TNRSAT-KYKVNVNNVIESMQSKGIKFMSPLKISSEERAGEEWNISALIEPK 262

Query: 457  GKLIPHNNVMYENPRGSISIRFQDYRWINDNNETESTLGSIEETDNRMN----REKELPE 290
                P + V YEN +G  SIRF +Y+        E +L  +E + +  N    R   + E
Sbjct: 263  ILKQPKDYVSYENSKGKTSIRFVNYK--------ERSLDDLEVSTSESNIGEARRHSVCE 314

Query: 289  YMSNPDFKFLIAKIKFEKDRILKQVKIIYDTFKKRYPEATEEIMEYQIKRVYNINQDTKE 110
            +M   D    I    +EK   L  V+  Y+T       A  E   Y  + +Y +N+  KE
Sbjct: 315  FMEKLDIDNEIK--HYEKK--LSNVQDEYNTSMICEWSAIREKELYFRRELYRLNKIKKE 370


>gb|KQL01322.1| hypothetical protein SETIT_015224mg [Setaria italica]
          Length = 869

 Score =  121 bits (303), Expect = 1e-25
 Identities = 106/360 (29%), Positives = 175/360 (48%), Gaps = 14/360 (3%)
 Frame = -2

Query: 1147 MQIFKRNEEKVERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXES 968
            M   K   + +E ++++I  E+    ++   ++ I+ +QIY+    +             
Sbjct: 27   MDRLKGGCDDIENLEEMIDVERDLERYQRDTLRKIRPQQIYQMGWFENKNGLYRISREVE 86

Query: 967  VAKEDQQLNFKIVEKRKE-------IKYIHLGLIIIGVKGLHRSYQGEKTLVILHDERHT 809
            ++   + +  +IV K+ E        KYIH G+ IIG+KG+ R   G K L+ L D+R  
Sbjct: 87   LSVLTEPVQLRIVSKQFENGLKYSGYKYIHQGMYIIGIKGMTRKKLGTKVLITLLDKRWD 146

Query: 808  DLGHGILGTFEIDMTKNNGEIIYFCPDYLIDAKD-IEYIKIGIKTRGYKFQEGINNLIIR 632
             +    LG  E DM +N   I Y  PD ++  K+ I+ + IG +T+GY+  +G  NL++ 
Sbjct: 147  SVNKAALGFLEGDMNENM-LITYIAPDLIMPIKEFIDKMAIGFQTKGYEDFKG-TNLLVS 204

Query: 631  TGFIGKLCTNCNVICNLKSDKNDQIEV--SKGIQAIPGIKYSSEENTGQELNIESFIKTE 458
              F+G+L TN +     K + N+ IE   SKGI+ +  +K SSEE  G+E NI + I+ +
Sbjct: 205  IEFVGRL-TNRSAT-KYKVNVNNVIESMQSKGIKFMSPLKISSEERAGEEWNISALIEPK 262

Query: 457  GKLIPHNNVMYENPRGSISIRFQDYRWINDNNETESTLGSIEETDNRMN----REKELPE 290
                P + V YEN +G  SIRF +Y+        E +L  +E + +  N    R   + E
Sbjct: 263  IFKQPKDYVSYENSKGKTSIRFVNYK--------ERSLDDLEVSTSESNIGEARRHSVCE 314

Query: 289  YMSNPDFKFLIAKIKFEKDRILKQVKIIYDTFKKRYPEATEEIMEYQIKRVYNINQDTKE 110
            +M   D    I    +EK   L +V+  Y+T       A  E   Y  + +Y +N+  KE
Sbjct: 315  FMEKLDIDNEIK--HYEKK--LSKVQDEYNTSMICEWTAIREKELYFRRELYRLNKIKKE 370


>tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1718

 Score =  121 bits (304), Expect = 1e-25
 Identities = 101/360 (28%), Positives = 184/360 (51%), Gaps = 14/360 (3%)
 Frame = -2

Query: 1135 KRNEEKVERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXESVAKE 956
            K     ++ ++D+ + ++Q   ++   ++ I+ +QIY     +             ++  
Sbjct: 26   KGKNXDIDELEDIAEVDKQLERYQRDTLRAIRPQQIYCMGFFENKNGLYRISREVELSVL 85

Query: 955  DQQLNFKIVEKRKE-------IKYIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTDLGH 797
             + +  KIV K  E        KYIH G+  IG+KG+ R   G K L+ L D+R   +  
Sbjct: 86   TKPVELKIVAKEFENGLKYSGYKYIHQGMYXIGIKGMTRKKLGAKVLITLLDKRWDTIDK 145

Query: 796  GILGTFEIDMTKNNGEIIYFCPDYLIDAKD-IEYIKIGIKTRGYKFQEGINNLIIRTGFI 620
              LG  E DM +N   I Y  PD ++  K+ I+ +  G +T+GY+  +G  NL++   FI
Sbjct: 146  AALGFLEGDMNENM-LITYIAPDLMMPIKEFIDKMSFGFQTKGYEEFKG-TNLLVSIEFI 203

Query: 619  GKLCTNCNVICNLKSDKNDQIEV--SKGIQAIPGIKYSSEENTGQELNIESFIKTEGKLI 446
            G+L TN +     K + ND IE   SKGI  +  +K SSEE  G+E  I   I+++    
Sbjct: 204  GRL-TNRSA-SKYKINVNDVIENMHSKGITFMSPLKISSEERAGEEWKISDLIESKTLSQ 261

Query: 445  PHNNVMYENPRGSISIRFQDYR-WINDNNETESTLGSIEETDNRMNREKELPEYMSNPDF 269
            P N + Y+N +G+ SIRF +Y+    D+ ETE++  +I +     NR   + E+M   D 
Sbjct: 262  PENYISYQNSKGNTSIRFINYKPRTTDDLETEASDRNIID-----NRRHSVSEFMXKLDQ 316

Query: 268  KFLIAKIKFEKDRILKQVKIIYD-TFKKRYPEATEEIMEY--QIKRVYNINQDTKECIKI 98
            +   ++IK+ +++ LK++   Y+ + K  +P+  ++ + +  ++ RV  + ++    ++I
Sbjct: 317  E---SEIKYYENK-LKEINEEYNKSIKCEWPKIRDKELYFYRELARVKKVKKNEDMAVEI 372


>gb|KQL01323.1| hypothetical protein SETIT_014964mg [Setaria italica]
          Length = 1151

 Score =  121 bits (303), Expect = 1e-25
 Identities = 106/360 (29%), Positives = 175/360 (48%), Gaps = 14/360 (3%)
 Frame = -2

Query: 1147 MQIFKRNEEKVERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXES 968
            M   K   + +E ++++I  E+    ++   ++ I+ +QIY+    +             
Sbjct: 27   MDRLKGGCDDIENLEEMIDVERDLERYQRDTLRKIRPQQIYQMGWFENKNGLYRISREVE 86

Query: 967  VAKEDQQLNFKIVEKRKE-------IKYIHLGLIIIGVKGLHRSYQGEKTLVILHDERHT 809
            ++   + +  +IV K+ E        KYIH G+ IIG+KG+ R   G K L+ L D+R  
Sbjct: 87   LSVLTEPVQLRIVSKQFENGLKYSGYKYIHQGMYIIGIKGMTRKKLGTKVLITLLDKRWD 146

Query: 808  DLGHGILGTFEIDMTKNNGEIIYFCPDYLIDAKD-IEYIKIGIKTRGYKFQEGINNLIIR 632
             +    LG  E DM +N   I Y  PD ++  K+ I+ + IG +T+GY+  +G  NL++ 
Sbjct: 147  SVNKAALGFLEGDMNENM-LITYIAPDLIMPIKEFIDKMAIGFQTKGYEDFKG-TNLLVS 204

Query: 631  TGFIGKLCTNCNVICNLKSDKNDQIEV--SKGIQAIPGIKYSSEENTGQELNIESFIKTE 458
              F+G+L TN +     K + N+ IE   SKGI+ +  +K SSEE  G+E NI + I+ +
Sbjct: 205  IEFVGRL-TNRSAT-KYKVNVNNVIESMQSKGIKFMSPLKISSEERAGEEWNISALIEPK 262

Query: 457  GKLIPHNNVMYENPRGSISIRFQDYRWINDNNETESTLGSIEETDNRMN----REKELPE 290
                P + V YEN +G  SIRF +Y+        E +L  +E + +  N    R   + E
Sbjct: 263  IFKQPKDYVSYENSKGKTSIRFVNYK--------ERSLDDLEVSTSESNIGEARRHSVCE 314

Query: 289  YMSNPDFKFLIAKIKFEKDRILKQVKIIYDTFKKRYPEATEEIMEYQIKRVYNINQDTKE 110
            +M   D    I    +EK   L +V+  Y+T       A  E   Y  + +Y +N+  KE
Sbjct: 315  FMEKLDIDNEIK--HYEKK--LSKVQDEYNTSMICEWTAIREKELYFRRELYRLNKIKKE 370


>gb|ADV58678.1| P194 [Rice tungro bacilliform virus]
          Length = 1674

 Score =  112 bits (281), Expect = 8e-23
 Identities = 88/283 (31%), Positives = 148/283 (52%), Gaps = 6/283 (2%)
 Frame = -2

Query: 907 YIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTDLGHGILGTFEIDMTKNNGEIIYFCPD 728
           Y H+G++ IG+KGLHR   G K +V+ +D+         +G+ E+DM    G + Y CPD
Sbjct: 112 YYHIGMMAIGIKGLHRKKIGTKVMVMFYDDSFGKAKEASIGSIEMDMNAGCG-VFYSCPD 170

Query: 727 YLIDAKDIEYIKIGIKTRGYKFQEGINNLIIRTGFIGKLCTNCNVICNLKSDKNDQIE-- 554
           +    KD+ ++KIGI+T GY+  EG  NL I    IG+L T  N+    K +  D +E  
Sbjct: 171 FAKYIKDLSHLKIGIQTLGYENYEG-KNLSIAIKTIGRLTT--NIQARYKMNVKDIVEQI 227

Query: 553 VSKGIQAIPGIKYSSEENTGQELNIESFIKTEG-KLIPHNNVMYENPRGSISIRFQDYRW 377
            S+GI  +  ++  S    G E N+  F+  EG   +P   ++Y+N RG  S+RF +Y  
Sbjct: 228 SSQGITMVAPMEIDSSHLDGNEWNLSKFMIQEGTSRVPSKALIYQNLRGGESLRFSNYAQ 287

Query: 376 INDNNETESTLGSIEETDNRMNREKELPEYMSNPDFKFL---IAKIKFEKDRILKQVKII 206
              ++ TE  + S E+ D ++  E +L   M+    + L   + +IK EK ++L +++  
Sbjct: 288 TKMHDPTE--INSDEDEDLKILGE-QLNAKMATFQEETLEQKLERIKEEKKQLLAKLEA- 343

Query: 205 YDTFKKRYPEATEEIMEYQIKRVYNINQDTKECIKIEDSYTNL 77
               KK+  E ++ +    I+  +N N +      ++DSY+ L
Sbjct: 344 ----KKKEIE-SKSLKMAVIEDDFNPNNE-----YLDDSYSEL 376


>emb|CAC15488.1| polyprotein [Rice tungro bacilliform virus]
          Length = 531

 Score =  110 bits (276), Expect = 1e-22
 Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 6/283 (2%)
 Frame = -2

Query: 907 YIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTDLGHGILGTFEIDMTKNNGEIIYFCPD 728
           Y H+G++ IG+KGLHR   G K +V+ +D+         +G+ E+DM    G + Y CPD
Sbjct: 3   YYHIGMMAIGIKGLHRKKIGTKVMVMFYDDSFGKAKEASIGSIEMDMNAGCG-VFYSCPD 61

Query: 727 YLIDAKDIEYIKIGIKTRGYKFQEGINNLIIRTGFIGKLCTNCNVICNLKSDKNDQIE-- 554
           +    KD+ ++KIGI+T GY+  EG  NL I    IG+L T  N+    K +  D +E  
Sbjct: 62  FAKYIKDLSHLKIGIQTLGYENYEG-KNLSIAIKTIGRLTT--NIQARYKMNVKDIVEQI 118

Query: 553 VSKGIQAIPGIKYSSEENTGQELNIESFIKTEG-KLIPHNNVMYENPRGSISIRFQDYRW 377
            S+GI  +  ++       G E N+  F+  EG   +P+  ++Y+N  G  S+RF +Y  
Sbjct: 119 SSQGITMVAPMEIDPSHLDGNEWNLSKFMIQEGTSRVPNKALIYQNLHGGESLRFSNYTQ 178

Query: 376 INDNNETESTLGSIEETDNRMNREKELPEYMSNPDFKFL---IAKIKFEKDRILKQVKII 206
              ++ TE  + S E+ D ++  E +L   M+    + L   + +IK EK ++L +++  
Sbjct: 179 TKMHDPTE--INSDEDEDLKILGE-QLNAKMATFQEETLEQKLERIKEEKKQLLAKLEA- 234

Query: 205 YDTFKKRYPEATEEIMEYQIKRVYNINQDTKECIKIEDSYTNL 77
               KK+  EA    M   I+  +N N +      ++DSY+ L
Sbjct: 235 ----KKKEIEAKSLNMAV-IEDDFNPNNE-----YLDDSYSEL 267


>emb|CAY56550.1| P194 protein [Rice tungro bacilliform virus]
          Length = 1674

 Score =  111 bits (277), Expect = 3e-22
 Identities = 88/283 (31%), Positives = 145/283 (51%), Gaps = 6/283 (2%)
 Frame = -2

Query: 907 YIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTDLGHGILGTFEIDMTKNNGEIIYFCPD 728
           Y H+G++ IG+KGLHR   G K +V+ +D+         +G+ E+DM    G + Y CPD
Sbjct: 112 YYHIGMMAIGIKGLHRKKIGTKVMVMFYDDSFGKAKEASIGSIEMDMNAGCG-VFYSCPD 170

Query: 727 YLIDAKDIEYIKIGIKTRGYKFQEGINNLIIRTGFIGKLCTNCNVICNLKSDKNDQIE-- 554
           +    KD+ ++KIGI+T GY+  EG  NL I    IG+L T  N+    K +  D +E  
Sbjct: 171 FAKYIKDLSHLKIGIQTLGYENYEG-KNLSIAIKTIGRLTT--NIQARYKMNVKDIVEQI 227

Query: 553 VSKGIQAIPGIKYSSEENTGQELNIESFIKTEG-KLIPHNNVMYENPRGSISIRFQDYRW 377
            S+GI  +  ++  S    G E N+  F+  EG   +P   ++Y+N  G  S+RF +Y  
Sbjct: 228 SSQGITMVAPMEIDSSHLDGNEWNLSKFMIQEGTSRVPSKALIYQNLHGGESLRFSNYTQ 287

Query: 376 INDNNETESTLGSIEETDNRMNREKELPEYMSNPDFKFL---IAKIKFEKDRILKQVKII 206
              ++ TE  + S E+ D ++  E +L   M+    + L   + +IK EK ++L +++  
Sbjct: 288 TKMHDPTE--INSDEDEDLKILGE-QLNAKMATLQEETLEQKLERIKREKKQVLAKLEA- 343

Query: 205 YDTFKKRYPEATEEIMEYQIKRVYNINQDTKECIKIEDSYTNL 77
               KK   E+    M   I+  +N N +      ++DSY+ L
Sbjct: 344 ----KKNEIESNPYKMAV-IEDDFNPNNE-----YLDDSYSEL 376


>emb|CAC41321.2| unnamed protein product [Rice tungro bacilliform virus]
          Length = 1674

 Score =  109 bits (272), Expect = 1e-21
 Identities = 86/283 (30%), Positives = 146/283 (51%), Gaps = 6/283 (2%)
 Frame = -2

Query: 907 YIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTDLGHGILGTFEIDMTKNNGEIIYFCPD 728
           Y H+G++ IG+KGLHR   G K +V+ +D+         +G+ E+DM    G + Y CPD
Sbjct: 112 YYHIGMMAIGIKGLHRKKIGTKVMVMFYDDSFGKAKEASIGSIEMDMNAGCG-VFYSCPD 170

Query: 727 YLIDAKDIEYIKIGIKTRGYKFQEGINNLIIRTGFIGKLCTNCNVICNLKSDKNDQIE-- 554
           +    KD+ ++KIGI+T GY+  EG  NL I    IG+L T  N+    K +  D +E  
Sbjct: 171 FAKYIKDLSHLKIGIQTLGYENYEG-KNLSIAIKTIGRLTT--NIQARYKMNVKDIVEQI 227

Query: 553 VSKGIQAIPGIKYSSEENTGQELNIESFIKTEG-KLIPHNNVMYENPRGSISIRFQDYRW 377
            S+GI  +  ++  S    G E N+  F+  EG   +P   ++Y+N  G  S+RF +Y  
Sbjct: 228 SSQGITMVAPMEIDSSHLDGNEWNLSKFMTQEGTSRVPSKALIYQNLHGGESLRFSNYSQ 287

Query: 376 INDNNETESTLGSIEETDNRMNREKELPEYMSNPDFKFL---IAKIKFEKDRILKQVKII 206
              ++  E  + S E+ D ++  E +L   M+    + L   + +IK EK ++L +++  
Sbjct: 288 TKMHDPAE--INSDEDEDLKILGE-QLNVKMATFQEETLEQKLERIKEEKKQLLAKLEA- 343

Query: 205 YDTFKKRYPEATEEIMEYQIKRVYNINQDTKECIKIEDSYTNL 77
               KK+  E ++ +    I+  +N N +      ++DSY+ L
Sbjct: 344 ----KKKEIE-SKSLKMAVIEDDFNPNNE-----YLDDSYSEL 376


>gb|AFQ62092.1| P194 [Rice tungro bacilliform virus]
          Length = 1674

 Score =  108 bits (270), Expect = 2e-21
 Identities = 74/236 (31%), Positives = 123/236 (52%), Gaps = 4/236 (1%)
 Frame = -2

Query: 907 YIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTDLGHGILGTFEIDMTKNNGEIIYFCPD 728
           Y H+G++ IG+KGLHR   G K +V+ +D+         +G+ E+DM    G + Y CPD
Sbjct: 112 YYHIGMMAIGIKGLHRKKIGTKVMVMFYDDSFGKAKEASIGSIEMDMNAGCG-VFYSCPD 170

Query: 727 YLIDAKDIEYIKIGIKTRGYKFQEGINNLIIRTGFIGKLCTNCNVICNLKSDKNDQIEVS 548
           +    KD+ ++KIGI+T GY+  EG  NL I    IG+L TN      +      +   S
Sbjct: 171 FAKYIKDLSHLKIGIQTLGYENYEG-KNLSIAIKTIGRLTTNIQARYKMNVKNIVEQISS 229

Query: 547 KGIQAIPGIKYSSEENTGQELNIESFIKTEG-KLIPHNNVMYENPRGSISIRFQDYRWIN 371
           +GI  +  ++  S    G E N+  F+  EG   +P   ++Y+N  G  S+RF +Y    
Sbjct: 230 QGITMVAPMEIDSSHLDGNEWNLSKFMIQEGTSRVPSKALIYQNLHGGESLRFSNYTQTK 289

Query: 370 DNNETESTLGSIEETDNRMNREKELPEYMSNPDFKFL---IAKIKFEKDRILKQVK 212
            ++ TE  + S E+ D ++  E +L   M+    + L   + +IK EK ++L +++
Sbjct: 290 MHDPTE--INSDEDEDLKILGE-QLNAKMATLQEETLEQKLERIKEEKKQLLVKLE 342


>gb|AAB03094.1| ORF3 [Rice tungro bacilliform virus]
          Length = 1675

 Score =  105 bits (263), Expect = 2e-20
 Identities = 95/358 (26%), Positives = 163/358 (45%), Gaps = 30/358 (8%)
 Frame = -2

Query: 1132 RNEEKVERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXE------ 971
            +N  K E +++V    Q+   F  K +  IK  ++Y+ N  +                  
Sbjct: 27   KNSTKRELIEEV-DVNQEVENFDWKKLSGIKPNKLYEKNWQEKVKLKQQSIVSAYKEEAI 85

Query: 970  SVAKEDQQLNFKIVEKRKEIK-----YIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTD 806
            SV            E  K +K     Y H+G++ IGVKGLHR   G K +++ +D+    
Sbjct: 86   SVTHNAYTTTLFPQEVIKNVKNQGKLYYHIGMMAIGVKGLHRRKIGTKVMIMFYDDSFGK 145

Query: 805  LGHGILGTFEIDMTKNNGEIIYFCPDYLIDAKDIEYIKIGIKTRGYKFQEGINNLIIRTG 626
                 +G+ E+DM    G + Y CPD+    KD+ ++KIGI+T GY+  EG  NL +   
Sbjct: 146  AREASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLGYENYEG-KNLSVAIK 203

Query: 625  FIGKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPGIKYSSEENTGQELNIESFIKTEG- 455
             IG+L T  N+    K +  D +E   S+GI  +  ++  S    G E ++  F+  E  
Sbjct: 204  TIGRLTT--NIQSKYKINVKDIVEQISSQGIIMVAPMEIDSSHLDGNEWDLSKFLNHENT 261

Query: 454  KLIPHNNVMYENPRGSISIRFQDYRWI-------NDNNETESTLGSIEETDNRMNR---- 308
              +P   ++Y+N +G  S+RF +Y+         N+++E E      E+ + +M R    
Sbjct: 262  SRVPTKALIYQNLQGGESLRFSNYKQTRMHDPTENNSDEDEDLKILGEQLNIKMARFYTM 321

Query: 307  ---EKELPEYMS--NPDFKFLIAKIKFEKDRILKQVKIIYDTFKKRYPEATEEIMEYQ 149
               E+EL E +     + + +IAK++  K +   ++ I+ D F        +   EY+
Sbjct: 322  QTPEEELREVIQQLEREKQAMIAKLE-AKMKESSKMAIVEDNFNPNNEYLEDTYSEYE 378


>dbj|BAA01607.1| 194K polypeptide [Rice tungro bacilliform virus]
            gi|229052|prf||1817177A capsid protein
          Length = 1675

 Score =  105 bits (263), Expect = 2e-20
 Identities = 95/358 (26%), Positives = 163/358 (45%), Gaps = 30/358 (8%)
 Frame = -2

Query: 1132 RNEEKVERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXE------ 971
            +N  K E +++V    Q+   F  K +  IK  ++Y+ N  +                  
Sbjct: 27   KNSTKRELIEEV-DVNQEVENFDWKKLSGIKPNKLYEKNWQEKVKLKQQSIVSAYKEEAI 85

Query: 970  SVAKEDQQLNFKIVEKRKEIK-----YIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTD 806
            SV            E  K +K     Y H+G++ IGVKGLHR   G K +++ +D+    
Sbjct: 86   SVTHNAYTTTLFPQEVIKNVKNQGKLYYHIGMMAIGVKGLHRRKIGTKVMIMFYDDSFGK 145

Query: 805  LGHGILGTFEIDMTKNNGEIIYFCPDYLIDAKDIEYIKIGIKTRGYKFQEGINNLIIRTG 626
                 +G+ E+DM    G + Y CPD+    KD+ ++KIGI+T GY+  EG  NL +   
Sbjct: 146  AREASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLGYENYEG-KNLSVAIK 203

Query: 625  FIGKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPGIKYSSEENTGQELNIESFIKTEG- 455
             IG+L T  N+    K +  D +E   S+GI  +  ++  S    G E ++  F+  E  
Sbjct: 204  TIGRLTT--NIQSKYKINVKDIVEQISSQGIIMVAPMEIDSSHLDGNEWDLSKFLNHENT 261

Query: 454  KLIPHNNVMYENPRGSISIRFQDYRWI-------NDNNETESTLGSIEETDNRMNR---- 308
              +P   ++Y+N +G  S+RF +Y+         N+++E E      E+ + +M R    
Sbjct: 262  SRVPTKALIYQNLQGGESLRFSNYKQTRMHDPTENNSDEDEDLKILGEQLNIKMARFYTM 321

Query: 307  ---EKELPEYMS--NPDFKFLIAKIKFEKDRILKQVKIIYDTFKKRYPEATEEIMEYQ 149
               E+EL E +     + + +IAK++  K +   ++ I+ D F        +   EY+
Sbjct: 322  QTPEEELREVIQQLEREKQAMIAKLE-AKMKESSKMAIVEDNFNPNNEYLEDTYSEYE 378


>ref|NP_056762.1| hypothetical protein [Rice tungro bacilliform virus]
            gi|130653|sp|P27502.1|POL_RTBVP RecName: Full=Polyprotein
            P3; AltName: Full=P194 protein; Contains: RecName:
            Full=Putative movement protein; Short=MP; Contains:
            RecName: Full=Capsid protein; AltName: Full=Coat protein;
            Short=CP; Contains: RecName: Full=Protease; Short=PR;
            Contains: RecName: Full=Reverse
            transcriptase/Ribonuclease H; Short=RT; AltName:
            Full=p55; Flags: Precursor gi|61913|emb|CAA40997.1| ORF
            P194 [Rice tungro bacilliform virus]
          Length = 1675

 Score =  105 bits (263), Expect = 2e-20
 Identities = 95/358 (26%), Positives = 163/358 (45%), Gaps = 30/358 (8%)
 Frame = -2

Query: 1132 RNEEKVERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXE------ 971
            +N  K E +++V    Q+   F  K +  IK  ++Y+ N  +                  
Sbjct: 27   KNSTKRELIEEV-DVNQEVENFDWKKLSGIKPNKLYEKNWQEKVKLKQQSIVSAYKEEAI 85

Query: 970  SVAKEDQQLNFKIVEKRKEIK-----YIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTD 806
            SV            E  K +K     Y H+G++ IGVKGLHR   G K +++ +D+    
Sbjct: 86   SVTHNAYTTTLFPQEVIKNVKNQGKLYYHIGMMAIGVKGLHRRKIGTKVMIMFYDDSFGK 145

Query: 805  LGHGILGTFEIDMTKNNGEIIYFCPDYLIDAKDIEYIKIGIKTRGYKFQEGINNLIIRTG 626
                 +G+ E+DM    G + Y CPD+    KD+ ++KIGI+T GY+  EG  NL +   
Sbjct: 146  AREASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLGYENYEG-KNLSVAIK 203

Query: 625  FIGKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPGIKYSSEENTGQELNIESFIKTEG- 455
             IG+L T  N+    K +  D +E   S+GI  +  ++  S    G E ++  F+  E  
Sbjct: 204  TIGRLTT--NIQSKYKINVKDIVEQISSQGIIMVAPMEIDSSHLDGNEWDLSKFLNHENT 261

Query: 454  KLIPHNNVMYENPRGSISIRFQDYRWI-------NDNNETESTLGSIEETDNRMNR---- 308
              +P   ++Y+N +G  S+RF +Y+         N+++E E      E+ + +M R    
Sbjct: 262  SRVPTKALIYQNLQGGESLRFSNYKQTRMHDPTENNSDEDEDLKILGEQLNIKMARFYTM 321

Query: 307  ---EKELPEYMS--NPDFKFLIAKIKFEKDRILKQVKIIYDTFKKRYPEATEEIMEYQ 149
               E+EL E +     + + +IAK++  K +   ++ I+ D F        +   EY+
Sbjct: 322  QTPEEELREVIQQLEREKQAMIAKLE-AKMKESSKMAIVEDNFNPNNEYLEDTYSEYE 378


>gb|AAD30190.1|AF113830_3 polyprotein P194 [Rice tungro bacilliform virus]
          Length = 1677

 Score =  105 bits (263), Expect = 2e-20
 Identities = 91/357 (25%), Positives = 160/357 (44%), Gaps = 29/357 (8%)
 Frame = -2

Query: 1132 RNEEKVERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXE------ 971
            +N  K E +++V    Q+   F  K +  IK  ++Y+ N  +                  
Sbjct: 27   KNSTKRELIEEV-DVNQEVENFDWKKLSGIKPNKLYEKNWQEKVKLKQQSIVSAYKEEAI 85

Query: 970  SVAKEDQQLNFKIVEKRKEIK-----YIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTD 806
            SV            E  K +K     Y H+G++ IGVKGLHR   G K +++ +D+    
Sbjct: 86   SVTHNAYTTTLFPQEVIKNVKNQGKLYYHIGMMAIGVKGLHRRKIGTKVMIMFYDDSFGK 145

Query: 805  LGHGILGTFEIDMTKNNGEIIYFCPDYLIDAKDIEYIKIGIKTRGYKFQEGINNLIIRTG 626
                 +G+ E+DM    G + Y CPD+    KD+ ++KIGI+T GY+  EG  NL +   
Sbjct: 146  AREASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLGYENYEG-KNLSVAIK 203

Query: 625  FIGKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPGIKYSSEENTGQELNIESFIKTEG- 455
             IG+L T  N+    K +  D +E   S+GI  +  ++  S    G E ++  F+  E  
Sbjct: 204  TIGRLTT--NIQSKYKINVKDIVEQISSQGIIMVAPMEIDSSHLDGNEWDLSKFLNHENT 261

Query: 454  KLIPHNNVMYENPRGSISIRFQDYRWINDNNETESTLGSIEE---TDNRMNREKELPEYM 284
              +P    +Y+N +G  S+RF +Y+    ++ TE+     E+      ++N +      M
Sbjct: 262  SRVPTKAFIYQNLQGGESLRFSNYKQTRMHDPTENNSDEDEDLKILGEQLNIKMARFYTM 321

Query: 283  SNPDFKFL--IAKIKFEKDRILKQVK----------IIYDTFKKRYPEATEEIMEYQ 149
              P+ + L  I +++ EK  ++++++          I+ D F        +   EY+
Sbjct: 322  QTPEEELLEVIQQLEREKQAMIEKLEAKMKESSKMAIVEDNFNPNNEYLEDTYSEYE 378


>gb|AAD30194.1|AF113831_3 polyprotein P194 [Rice tungro bacilliform virus]
          Length = 1675

 Score =  105 bits (262), Expect = 2e-20
 Identities = 95/358 (26%), Positives = 163/358 (45%), Gaps = 30/358 (8%)
 Frame = -2

Query: 1132 RNEEKVERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXE------ 971
            +N  K E +++ I   Q+   F  K +  IK  ++Y+ N  +                  
Sbjct: 27   KNSTKRELIEE-IDVNQEVENFDWKKLSGIKPNKLYEKNWQEKVKLKQQSIVSAYKEEAI 85

Query: 970  SVAKEDQQLNFKIVEKRKEIK-----YIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTD 806
            SV            E  K +K     Y H+G++ IGVKGLHR   G K +++ +D+    
Sbjct: 86   SVTHNAYTTTLFPQEVIKNVKNQGKLYYHIGMMAIGVKGLHRRKIGTKVMIMFYDDSFGK 145

Query: 805  LGHGILGTFEIDMTKNNGEIIYFCPDYLIDAKDIEYIKIGIKTRGYKFQEGINNLIIRTG 626
                 +G+ E+DM    G + Y CPD+    KD+ ++KIGI+T GY+  EG  NL +   
Sbjct: 146  ARKASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLGYENYEG-KNLSVAIK 203

Query: 625  FIGKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPGIKYSSEENTGQELNIESFIKTEG- 455
             IG+L T  N+    K +  D +E   S+GI  +  ++  S    G E ++  F+  E  
Sbjct: 204  TIGRLTT--NIQSKYKINVKDIVEQISSQGIIMVAPMEIDSSHLDGNEWDLSKFLNHENT 261

Query: 454  KLIPHNNVMYENPRGSISIRFQDYRWI-------NDNNETESTLGSIEETDNRMNR---- 308
              +P   ++Y+N +G  S+RF +Y+         N+++E E      E+ + +M R    
Sbjct: 262  SRVPTKALIYQNLQGGESLRFSNYKQTRMHDPTENNSDEDEDLKILGEQLNIKMARFYTM 321

Query: 307  ---EKELPEYMS--NPDFKFLIAKIKFEKDRILKQVKIIYDTFKKRYPEATEEIMEYQ 149
               E+EL E +     + + +IAK++  K +   ++ I+ D F        +   EY+
Sbjct: 322  QTPEEELREVIQQLEREKQAMIAKLE-AKMKESSKMAIVEDNFNPNNEYLEDTYSEYE 378


>gb|AAD30198.1|AF113832_3 polyprotein P194 [Rice tungro bacilliform virus]
          Length = 1677

 Score =  105 bits (261), Expect = 3e-20
 Identities = 92/360 (25%), Positives = 163/360 (45%), Gaps = 32/360 (8%)
 Frame = -2

Query: 1132 RNEEKVERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXE------ 971
            +N  K E +++V    Q+   F  K +  IK  ++Y+ N  +                  
Sbjct: 27   KNSTKRELIEEV-DVNQEVENFDWKKLSGIKPNKLYEKNWQEKVKLKQQSIVSAYKEEAI 85

Query: 970  SVAKEDQQLNFKIVEKRKEIK-----YIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTD 806
            SV            E  K +K     Y H+G++ IGVKGLHR   G K +++ +D+    
Sbjct: 86   SVTHNAYTTTLFPQEVIKNVKNQGKLYYHIGMMAIGVKGLHRRKIGTKVMIMFYDDSFGK 145

Query: 805  LGHGILGTFEIDMTKNNGEIIYFCPDYLIDAKDIEYIKIGIKTRGYKFQEGINNLIIRTG 626
                 +G+ E+DM    G + Y CPD+    KD+ ++KIGI+T GY+  EG  NL +   
Sbjct: 146  AREASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLGYENYEG-KNLSVAIK 203

Query: 625  FIGKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPGIKYSSEENTGQELNIESFIKTEG- 455
             IG+L T  N+    K +  D +E   S+GI  +  ++  S    G E ++  F+  E  
Sbjct: 204  TIGRLTT--NIQSKYKINVKDIVEQISSQGIIMVAPMEIDSSHLDGNEWDLSKFLNHENT 261

Query: 454  KLIPHNNVMYENPRGSISIRFQDYRW------INDNNETESTLGSIEETDNRMNREKELP 293
              +P   ++Y+N +G  S+RF +Y+       I +N++ +  L  + E   ++N +    
Sbjct: 262  SRVPTKALIYQNLQGGESLRFSNYKQTRMHDPIENNSDEDENLKILGE---QLNIKMARF 318

Query: 292  EYMSNPDFKFL--IAKIKFEKDRILKQVK----------IIYDTFKKRYPEATEEIMEYQ 149
              M  P+ + L  I +++ EK  ++++++          I+ D F        +   EY+
Sbjct: 319  YTMQTPEEELLEVIQQLEREKQAMIEKLEAKMKESSKMAIVEDNFNPNNEYLEDTYSEYE 378


>gb|AAC27711.1| polyprotein [Rice tungro bacilliform virus]
          Length = 1675

 Score =  103 bits (257), Expect = 9e-20
 Identities = 93/361 (25%), Positives = 161/361 (44%), Gaps = 33/361 (9%)
 Frame = -2

Query: 1132 RNEEKVERVQDVIKTEQQFVLFKDKDIKNIKRKQIYKNNQPDXXXXXXXXXXXE------ 971
            +N  K E +++V    Q    F  K +  IK  ++Y+ N  +                  
Sbjct: 27   KNSTKRELIEEV-DVNQDVENFDWKKLSGIKPNKLYEKNWQEKVKLKQQSIVSAYKEEAI 85

Query: 970  SVAKEDQQLNFKIVEKRKEIK-----YIHLGLIIIGVKGLHRSYQGEKTLVILHDERHTD 806
            SV            E  K +K     Y H+G++ IGVKGLHR   G K +++ +D+    
Sbjct: 86   SVTHNAYTTTLFPQEVIKNVKNQGKLYYHIGMMAIGVKGLHRRKIGTKVMIMSYDDSFGK 145

Query: 805  LGHGILGTFEIDMTKNNGEIIYFCPDYLIDAKDIEYIKIGIKTRGYKFQEGINNLIIRTG 626
                 +G+ E+DM    G + Y CPD+    KD+ ++KIGI+T GY+  EG  NL +   
Sbjct: 146  AREASIGSIEMDMNAGCG-VFYSCPDFAKYIKDLSHLKIGIQTLGYENYEG-KNLSVAIK 203

Query: 625  FIGKLCTNCNVICNLKSDKNDQIE--VSKGIQAIPGIKYSSEENTGQELNIESFIKTEG- 455
             IG+L T  N+    K +  D +E   S+GI  +  ++  S    G E ++  F+  E  
Sbjct: 204  TIGRLTT--NIQSKYKINVKDIVEQISSQGIIMVAPMEIDSSHLDGNEWDLSKFLNQENT 261

Query: 454  KLIPHNNVMYENPRGSISIRFQDYRWI-------NDNNETESTLGSIEETDNRMNR--EK 302
              +P   ++Y+N  G  S+RF +Y+         N+++E E      E+ + +M R    
Sbjct: 262  SRVPTKALIYQNLHGGESLRFSNYKQTRMHDLTENNSDEDEDLKILGEQLNIKMARFYTM 321

Query: 301  ELPEYMSNPDFKFLIAKIKFEKDRILKQVK----------IIYDTFKKRYPEATEEIMEY 152
            E PE     + + +I +++ EK  ++++++          I+ D F        +   EY
Sbjct: 322  ETPE----EELRAVIQQLEREKQAMVEKLEAKMKESSKMAIVEDNFNPNNEYLEDTYSEY 377

Query: 151  Q 149
            +
Sbjct: 378  E 378