BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00054662
         (611 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP65700.1| Retrovirus-related Pol polyprotein from transposo...   127   1e-32
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]   125   7e-30
emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]   124   2e-29
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]   124   2e-29
ref|XP_008356319.1| PREDICTED: uncharacterized protein LOC103420...   119   7e-28
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]   117   3e-27
ref|XP_008356246.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   115   2e-26
gb|KYP43329.1| Retrovirus-related Pol polyprotein from transposo...   103   1e-22
ref|XP_008358228.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   102   6e-22
gb|KYP76442.1| Retrovirus-related Pol polyprotein from transposo...   101   7e-22
gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposo...   102   8e-22
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...    91   6e-20
ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r...    97   7e-20
ref|XP_015168851.1| PREDICTED: uncharacterized protein LOC107062...    82   7e-20
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    89   4e-19
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]       95   4e-19
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]    89   8e-19
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...    87   1e-18
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]    93   2e-18
gb|KYP48432.1| Retrovirus-related Pol polyprotein from transposo...    91   2e-18

>gb|KYP65700.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 288

 Score =  127 bits (319), Expect = 1e-32
 Identities = 70/184 (38%), Positives = 102/184 (55%), Gaps = 4/184 (2%)
 Frame = +2

Query: 71  FLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQTYA---PNSDSSLVLPLPIPDTI 241
           FLGYP     Y+LYN++  ++  SRDV F E  FP+++ +   P +DS  V+P  +PD+ 
Sbjct: 87  FLGYPVGQKAYKLYNIDSHQVFTSRDVIFHEDIFPYESISSSPPKTDS--VIPFAVPDS- 143

Query: 242 TPSDSPIXXXXXXXXXXXXXXXXXXXXXXXXITQPSRLRDYICPTLPSSNALSTHFN-TS 418
               SPI                        + +P  L DY+C  + S  +L    +  S
Sbjct: 144 ----SPIQPTHAESAPAIPPIAPLRCSQRTHV-RPVALNDYVCNQVSSPKSLLFLSSFPS 198

Query: 419 SGTAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYSQAVKHSHWRDAMQAEILALEVNN 598
            GT YPL NFISY  ++P H +F++ +++ +EP+ Y QA  HSHW+ AMQ+E+ ALE NN
Sbjct: 199 QGTRYPLCNFISYGCYSPQHRSFIATITNDVEPTCYEQAASHSHWQIAMQSELAALEANN 258

Query: 599 TWFL 610
           TWFL
Sbjct: 259 TWFL 262


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score =  125 bits (314), Expect = 7e-30
 Identities = 70/196 (35%), Positives = 104/196 (53%), Gaps = 16/196 (8%)
 Frame = +2

Query: 71   FLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQTY-APNSDSSLVLPLPI------ 229
            FLGYP     Y+LY+L+  ++  SRDV F E  FP+++  +P+S+S  V+PL I      
Sbjct: 648  FLGYPVGQKAYKLYDLDTHQMFTSRDVVFHETIFPYESIPSPSSNSDPVIPLSISDLSPP 707

Query: 230  ------PDTITPSDSPIXXXXXXXXXXXXXXXXXXXXXXXXITQ--PSRLRDYICPTLPS 385
                  P+ I+P   P                              P  LRDY+C  + S
Sbjct: 708  VPQPSPPEPISPIQQPSLPNSVSTQPSPASPPPEPILRRSQXPHHPPMALRDYVCNQVTS 767

Query: 386  SNALSTHFNT-SSGTAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYSQAVKHSHWRDA 562
             N L    ++   GT YPL NF+SY +++P H +F +A+S  +EP+SY++   HSHW++A
Sbjct: 768  PNHLPPLSSSPQKGTRYPLCNFVSYHRYSPQHRSFTAAVSQDIEPTSYAEXASHSHWQEA 827

Query: 563  MQAEILALEVNNTWFL 610
            MQ+E+ ALE N+TW L
Sbjct: 828  MQSELAALEANHTWSL 843


>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
          Length = 1322

 Score =  124 bits (311), Expect = 2e-29
 Identities = 69/196 (35%), Positives = 101/196 (51%), Gaps = 16/196 (8%)
 Frame = +2

Query: 71   FLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQTY-APNSDSSLVLPLPIPDTITP 247
            FLGYP     Y+LY+L+  ++  SRDV F E  FP+++  +P+S+S  V+PL I D   P
Sbjct: 671  FLGYPVGQKAYKLYDLDTHQMFTSRDVVFHETIFPYESIPSPSSNSDPVIPLSISDLSPP 730

Query: 248  SDSPIXXXXXXXXXXXXXXXXXXXXXXXXITQPS--------------RLRDYICPTLPS 385
               P                            P                LRDY+C  +  
Sbjct: 731  VQQPSPPEPISPIQQPSLPNSVSTQPSHASPPPEPILRRSQRPHHPPMALRDYVCNQVTF 790

Query: 386  SNALSTHFNT-SSGTAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYSQAVKHSHWRDA 562
             N L    ++   GT YPL NF+SY +++P H +F +A+S  +EP+SY++A  HSHW++A
Sbjct: 791  PNHLPPLSSSPQKGTRYPLCNFVSYHRYSPQHRSFTAAVSQDIEPTSYAEAASHSHWQEA 850

Query: 563  MQAEILALEVNNTWFL 610
            MQ+E+ ALE N+TW L
Sbjct: 851  MQSELAALEANHTWSL 866


>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
          Length = 1059

 Score =  124 bits (310), Expect = 2e-29
 Identities = 70/196 (35%), Positives = 102/196 (52%), Gaps = 16/196 (8%)
 Frame = +2

Query: 71   FLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQTY-APNSDSSLVLPLPI------ 229
            FLGYP     Y+LY+L+  ++  SRDV F E  FP+++  +P+S+S  V+PL I      
Sbjct: 763  FLGYPVGQKAYKLYDLDTHQMFTSRDVVFHETIFPYESIPSPSSNSDPVIPLSISDLSPP 822

Query: 230  ------PDTITPSDSPIXXXXXXXXXXXXXXXXXXXXXXXXITQ--PSRLRDYICPTLPS 385
                  P+ I+P   P                              P  LRDY+C  + S
Sbjct: 823  VPQPSPPEPISPIQQPSLPNSVSTQPSPASPPPEPILRRSQRPHHPPMALRDYVCNQVTS 882

Query: 386  SN-ALSTHFNTSSGTAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYSQAVKHSHWRDA 562
             N  L    +    T YPL NF+SY  ++P H +F +A+S  +EP+SY++A  HSHW++A
Sbjct: 883  PNHLLPLSSSPQKSTCYPLCNFVSYHHYSPQHRSFTTAVSQDIEPTSYAEAASHSHWQEA 942

Query: 563  MQAEILALEVNNTWFL 610
            MQ+E+ ALE N+TW L
Sbjct: 943  MQSELAALEANHTWSL 958


>ref|XP_008356319.1| PREDICTED: uncharacterized protein LOC103420023 [Malus domestica]
          Length = 910

 Score =  119 bits (299), Expect = 7e-28
 Identities = 69/215 (32%), Positives = 101/215 (46%), Gaps = 37/215 (17%)
 Frame = +2

Query: 77  GYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQTYAPNSDS----SLVLPLPIPDTIT 244
           GYP     Y+LY+L   K   SRDV F EH FP+Q ++ + D       VLP P+PD   
Sbjct: 307 GYPVGQKAYKLYDLTTHKFFTSRDVIFQEHIFPYQHHSISDDQLPLPGPVLPQPLPDYTV 366

Query: 245 ----------PSDSPIXXXXXXXXXXXXXXXXXXXXXXXXI------------------- 337
                     P  SP+                        +                   
Sbjct: 367 LSASPSAPTFPPXSPVESSPYPPPASNAPPLSVPATAITALPAPVPPESSMPVLRRSDRR 426

Query: 338 -TQPSRLRDYICPTLPSSNAL---STHFNTSSGTAYPLSNFISYSKFTPAHYAFLSALSH 505
              P+R  DY+CPTLPS+  +   S+    ++GT YPL+NF++Y +F+P   +FL++++ 
Sbjct: 427 SAPPTRFSDYVCPTLPSTQPIDSSSSSTGPTTGTRYPLANFLTYHRFSPQQQSFLASINQ 486

Query: 506 SLEPSSYSQAVKHSHWRDAMQAEILALEVNNTWFL 610
            +EP +Y+QA  H HW+ AM +E+ ALE  NTW L
Sbjct: 487 QVEPHTYAQAALHPHWQGAMDSELHALEATNTWTL 521


>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
          Length = 1125

 Score =  117 bits (294), Expect = 3e-27
 Identities = 66/183 (36%), Positives = 100/183 (54%), Gaps = 3/183 (1%)
 Frame = +2

Query: 71  FLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQTY-APNSDSSLVLPLPIPDTI-T 244
           FLGYP     Y+LY+L+  ++  SRDV F E  FP+++  +P+S+S    P  +   + +
Sbjct: 499 FLGYPVGQKAYKLYDLDTHQMFTSRDVVFHETIFPYESIPSPSSNSD---PFLLSHHLAS 555

Query: 245 PSDSPIXXXXXXXXXXXXXXXXXXXXXXXXITQPSRLRDYICPTLPSSNALSTHFNT-SS 421
           P   PI                           P  LRDY+C  + S N L    ++   
Sbjct: 556 PPPEPILRRSQRPHHP-----------------PMALRDYVCNQVTSPNHLPPLSSSPQK 598

Query: 422 GTAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYSQAVKHSHWRDAMQAEILALEVNNT 601
           GT YPL NF+SY +++P H +F +A+S  +EP+SY++A  HSHW++AMQ+E+  LE N+T
Sbjct: 599 GTRYPLCNFVSYHRYSPQHRSFTAAVSQDIEPTSYAEATSHSHWQEAMQSELATLEANHT 658

Query: 602 WFL 610
           W L
Sbjct: 659 WSL 661


>ref|XP_008356246.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103419939
            [Malus domestica]
          Length = 976

 Score =  115 bits (288), Expect = 2e-26
 Identities = 68/207 (32%), Positives = 96/207 (46%), Gaps = 30/207 (14%)
 Frame = +2

Query: 80   YPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQTYAPNSDS-SLVLPLPI---PDTITP 247
            Y      Y+LY+L   K   SRDV F EH FP+Q  +P+ D    VLP P+    D   P
Sbjct: 427  YXVGQKAYKLYDLTTHKFFTSRDVIFHEHIFPYQHQSPSDDQPGPVLPXPLLDYTDXSAP 486

Query: 248  SDSPIXXXXXXXXXXXXXXXXXXXXXXXXI-----------------------TQPSRLR 358
              SP+                        +                         P+   
Sbjct: 487  IVSPVSPVESFPPASDATSPSVPDPAISALPXPXPXAPSVPSAPVLRXSDRRSAPPAXFS 546

Query: 359  DYICPTLPSSNAL---STHFNTSSGTAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYS 529
            DY+CPTLPS+  +   S+    ++GT YPL+NF++Y +F+P   +FL ++S  +EP +Y+
Sbjct: 547  DYVCPTLPSTQPIDSSSSSXGPTTGTRYPLANFLTYHRFSPQQXSFLXSISRQVEPHTYA 606

Query: 530  QAVKHSHWRDAMQAEILALEVNNTWFL 610
            QA  HSHW  AM +E+ ALE  NTW L
Sbjct: 607  QAALHSHWHAAMDSELRALEATNTWTL 633


>gb|KYP43329.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 952

 Score =  103 bits (257), Expect(2) = 1e-22
 Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 31/209 (14%)
 Frame = +2

Query: 71  FLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQT-------------------YAP 193
           F+GYPSN  G++++NL+ K+I +SRDV F E  FPF +                   Y P
Sbjct: 282 FVGYPSNKKGWKVFNLDTKEIFVSRDVKFFEDEFPFASPTTNISPAPIHPTSTSMILYEP 341

Query: 194 N---SDSSLVLPLPIP---------DTITPSDSPIXXXXXXXXXXXXXXXXXXXXXXXXI 337
           +   + SS V PLP P         DT +PS  P+                         
Sbjct: 342 HDTRTSSSDVAPLPDPESVERGSSVDTSSPSSMPLRRTSRSHRPL--------------- 386

Query: 338 TQPSRLRDYICPTLPSSNALSTHFNTSSGTAYPLSNFISYSKFTPAHYAFLSALSHSLEP 517
              + L+DY C      ++ +T  +   G  YP+ +F++   F+  H  FL+A+S+++EP
Sbjct: 387 ---AHLKDYYCRNATKPSSANTLSSIPLGILYPIEHFVTNHNFSSQHQKFLAAVSNTIEP 443

Query: 518 SSYSQAVKHSHWRDAMQAEILALEVNNTW 604
            S+ +A+K   W+ AM+ EI ALE N+TW
Sbjct: 444 RSFKEAMKDPLWQQAMKLEIQALEDNHTW 472



 Score = 30.0 bits (66), Expect(2) = 1e-22
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 3   CLCYAHTIAANRDKFQPRADPCVF*DIP 86
           CLCYA  +    DKF  R+  CVF   P
Sbjct: 259 CLCYATVLPKPFDKFAARSQKCVFVGYP 286


>ref|XP_008358228.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103421967
            [Malus domestica]
          Length = 981

 Score =  102 bits (255), Expect = 6e-22
 Identities = 61/182 (33%), Positives = 88/182 (48%), Gaps = 30/182 (16%)
 Frame = +2

Query: 155  FVEHTFPFQTYAPNSDS-SLVLPLPIPDTITPSD---SPIXXXXXXXXXXXXXXXXXXXX 322
            F EH FP+Q  +P+ D    VLP P+ D   PS    SP+                    
Sbjct: 457  FHEHIFPYQHQSPSDDQPGPVLPXPLLDYTDPSAPIVSPVSPVESFPPASDATSPXVPDP 516

Query: 323  XXXXI-----------------------TQPSRLRDYICPTLPSSNAL---STHFNTSSG 424
                +                         P+R  DY+CPTLPS+  +   S+    ++G
Sbjct: 517  AISALPXPXPXAPSVPSAPVLRRSDRRSAPPARFSDYVCPTLPSTQPIDSSSSSXGPTTG 576

Query: 425  TAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYSQAVKHSHWRDAMQAEILALEVNNTW 604
            T YPL+NF++Y +F+P   +FL+++S  +EP +Y+QA  HSHW  AM +E+ ALE  NTW
Sbjct: 577  TRYPLANFLTYHRFSPQQQSFLTSISRQVEPHTYAQAALHSHWHAAMDSELRALEATNTW 636

Query: 605  FL 610
             L
Sbjct: 637  TL 638


>gb|KYP76442.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 403

 Score =  101 bits (251), Expect = 7e-22
 Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 11/214 (5%)
 Frame = +2

Query: 2   LSLLCAHYSCQSR*ISTPCRSLCFLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQ 181
           +S + A+Y+     +++   S  FLG+ S+  GY ++NL  +++ +S +V F E  FP+ 
Sbjct: 169 ISTITAYYTK----LASRAHSSIFLGFKSHTKGYLVFNLHTRELTVSHNVVFYEDQFPYL 224

Query: 182 TYAP---NSDSSLVLPLPIPDT--------ITPSDSPIXXXXXXXXXXXXXXXXXXXXXX 328
           + +    +SD SL L    P T        IT S SP                       
Sbjct: 225 STSHQTLSSDPSLPLFTFFPPTHPTSFDHIITNSPSPTVPAIPSTTSTPTSNLHVPSHPI 284

Query: 329 XXITQPSRLRDYICPTLPSSNALSTHFNTSSGTAYPLSNFISYSKFTPAHYAFLSALSHS 508
                P+ L+D+       ++  ST   +S G  YPL+NF+SY++ +P+   F+ ++S+S
Sbjct: 285 RTRQPPTYLQDF------QTSFASTRTTSSKGIRYPLNNFLSYNRLSPSFKNFIFSISYS 338

Query: 509 LEPSSYSQAVKHSHWRDAMQAEILALEVNNTWFL 610
           +EP SY++A K   W  AMQ EI  LE N+TWFL
Sbjct: 339 IEPQSYAEASKSDCWIKAMQDEITTLETNHTWFL 372


>gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1394

 Score =  102 bits (254), Expect = 8e-22
 Identities = 70/208 (33%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
 Frame = +2

Query: 71   FLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQTYAPNS---------------DS 205
            FLG+     GY L+NL  K  ++SR+V F E  FP+ + +P+                DS
Sbjct: 717  FLGFKPGVKGYLLFNLTTKSFLLSRNVIFYESHFPYASNSPSVSNNHTTGTTASQQSFDS 776

Query: 206  SLVLPL--PIPDTITPSDSPIXXXXXXXXXXXXXXXXXXXXXXXXITQPSR--------- 352
             +   +   IP+ +T SD                           + QP+R         
Sbjct: 777  LIAFDIISAIPNNVT-SDIVSSNIDHNAVEPVLQFNDDSNDAVQIVDQPTRISTRPRKPP 835

Query: 353  --LRDYICPTLPSSNALSTHFNTSSGTAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSY 526
              L DY CPTL S+N       TS  T YPL +++SYS  + +H AF  +LS ++EP+S+
Sbjct: 836  AYLSDYDCPTLSSAN-------TSCCTPYPLHSYLSYSNCSDSHTAFCMSLSATIEPTSF 888

Query: 527  SQAVKHSHWRDAMQAEILALEVNNTWFL 610
             +A KH HW+ AM AEI ALE N TW L
Sbjct: 889  KEACKHDHWQQAMLAEIQALERNKTWSL 916


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score = 90.5 bits (223), Expect(2) = 6e-20
 Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
 Frame = +2

Query: 59   RSLCFLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQTYAPNSDSSLVLPLP---- 226
            R+  FLGYPS + GY+L +LE   + ISR+V F E  FP     P S+SSL L  P    
Sbjct: 802  RACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHEEVFPLAKN-PGSESSLKLFTPMVPV 860

Query: 227  ----IPDTI-TPSDSPIXXXXXXXXXXXXXXXXXXXXXXXXITQPSRLRDYICPTLPSSN 391
                I DT  +PS  P                            P+ L DY C T+ S +
Sbjct: 861  SSGIISDTTHSPSSLPSQISDLPPQISSQRVRKP----------PAHLNDYHCNTMQSDH 910

Query: 392  ALSTHFNTSSGTAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYSQAVKHSHWRDAMQA 571
                         YP+S+ ISYSK +P+H  +++ ++    P++Y++A     W +A+ A
Sbjct: 911  K------------YPISSTISYSKISPSHMCYINNITKIPIPTNYAEAQDTKEWCEAVDA 958

Query: 572  EILALEVNNTW 604
            EI A+E  NTW
Sbjct: 959  EIGAMEKTNTW 969



 Score = 34.3 bits (77), Expect(2) = 6e-20
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 3   CLCYAHTIAANRDKFQPRADPCVF*DIP 86
           CLCY+ T    R KFQPR+  C+F   P
Sbjct: 783 CLCYSSTSPKQRHKFQPRSRACLFLGYP 810


>ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
           from transposon TNT 1-94 [Gossypium raimondii]
          Length = 683

 Score = 96.7 bits (239), Expect = 7e-20
 Identities = 65/184 (35%), Positives = 90/184 (48%), Gaps = 6/184 (3%)
 Frame = +2

Query: 71  FLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQTYAPNSDSSLVLPLPIPDTITPS 250
           FLGY  +  GY L ++E + I +SR+VTF E  FPF  ++ N+ ++   P+ +  + T  
Sbjct: 30  FLGYKPHVKGYILLDIETRAIFVSRNVTFHETIFPFLQHSLNNPTT---PVGLLASDTIY 86

Query: 251 DSPIXXXXXXXXXXXXXXXXXXXXXXXXITQ------PSRLRDYICPTLPSSNALSTHFN 412
           DSPI                                 PS L+DY    LP++        
Sbjct: 87  DSPISPPQPSSTDQSSSTSHPPTQPSTSSRPQRNRRPPSYLQDYQHYQLPAAT------- 139

Query: 413 TSSGTAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYSQAVKHSHWRDAMQAEILALEV 592
              GT + + N ISY   +P H  F  A+S S+EP +Y QA K +HW +AMQAEI ALE 
Sbjct: 140 NHPGTPHSIFNCISYHNLSPQHLHFTLAISASIEPKTYKQASKFTHWNEAMQAEINALEQ 199

Query: 593 NNTW 604
           NNTW
Sbjct: 200 NNTW 203


>ref|XP_015168851.1| PREDICTED: uncharacterized protein LOC107062574 [Solanum tuberosum]
          Length = 1100

 Score = 82.4 bits (202), Expect(2) = 7e-20
 Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 16/194 (8%)
 Frame = +2

Query: 71   FLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQTYAPNS--------------DSS 208
            F+GYP N  GY++ +L  +KI +SRDV F E  FPF T   +S               SS
Sbjct: 856  FIGYPPNQKGYKIMDLVTRKIFVSRDVKFHESHFPFATQCSSSTPSHLFTAPDLLPDSSS 915

Query: 209  LVLPLPIPDTITPSDSPIXXXXXXXXXXXXXXXXXXXXXXXXITQ-PSRLRDYICPTLPS 385
            L   LP+  T  P +                           I+Q PS L+D++C ++  
Sbjct: 916  LPPSLPLFGTPNPPEPESIPSSSLPRTSTPVSSPTPVRKSERISQKPSYLKDFVCNSILL 975

Query: 386  SNALSTHF-NTSSGTAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYSQAVKHSHWRDA 562
            ++  ++ F +++  TA+      +++  +  +   L +LS   EP S+++A KH+ W+ A
Sbjct: 976  TDVTNSCFVHSNRPTAF------AFAALSIGNQQMLHSLSVLTEPKSFAEASKHAGWQQA 1029

Query: 563  MQAEILALEVNNTW 604
            M+ E+ ALE N TW
Sbjct: 1030 MKDELAALEHNKTW 1043



 Score = 42.0 bits (97), Expect(2) = 7e-20
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = +3

Query: 3   CLCYAHTIAANRDKFQPRADPCVF*DIPP 89
           CLCY  T++  RDKFQP+A  CVF   PP
Sbjct: 833 CLCYVSTLSHARDKFQPKATECVFIGYPP 861


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 88.6 bits (218), Expect(2) = 4e-19
 Identities = 57/182 (31%), Positives = 82/182 (45%)
 Frame = +2

Query: 59   RSLCFLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQTYAPNSDSSLVLPLPIPDT 238
            R+  FLGYPS + GY+L +LE   I ISR V F E  FPF           ++P  + D 
Sbjct: 830  RACVFLGYPSGYKGYKLLDLETNTIHISRHVVFYETVFPFT-------DKTIIPRDVFDL 882

Query: 239  ITPSDSPIXXXXXXXXXXXXXXXXXXXXXXXXITQPSRLRDYICPTLPSSNALSTHFNTS 418
            + P    I                           P  L+DY C  +P         + +
Sbjct: 883  VDPVHENIENPPSTSESAPKVSSKRESRP------PGYLQDYFCNAVP---------DVT 927

Query: 419  SGTAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYSQAVKHSHWRDAMQAEILALEVNN 598
                YPL+ +I+Y++ +    A++ A++   EP +Y+QA K   W DAM+ EI ALE  N
Sbjct: 928  KDVRYPLNAYINYTQLSEEFTAYICAVNKYPEPCTYAQAKKIKEWLDAMEIEIDALESTN 987

Query: 599  TW 604
            TW
Sbjct: 988  TW 989



 Score = 33.5 bits (75), Expect(2) = 4e-19
 Identities = 15/28 (53%), Positives = 15/28 (53%)
 Frame = +3

Query: 3   CLCYAHTIAANRDKFQPRADPCVF*DIP 86
           CLCY  T    R KF PRA  CVF   P
Sbjct: 811 CLCYESTSPQQRHKFAPRARACVFLGYP 838


>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score = 94.7 bits (234), Expect = 4e-19
 Identities = 60/197 (30%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
 Frame = +2

Query: 59   RSLCFLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHT-------------FPFQTYAPNS 199
            R  CFLGY S   G+ L++L  ++I ISR+V F +H              FPF +  P+ 
Sbjct: 711  RKCCFLGYKSGFKGFVLFDLHSREIFISRNVIFHDHILPYPPSSEKNLEYFPFSSLQPSD 770

Query: 200  DSSLVLPLPIPDTITPSDSPIXXXXXXXXXXXXXXXXXXXXXXXXITQPSRLRDYICPTL 379
             +S+    P P   +PS S                             P   +DYIC   
Sbjct: 771  STSISTKTPSPPIESPSSSSPPQRISSRIKH----------------SPPHFKDYIC--- 811

Query: 380  PSSNALSTHFNTSSGTAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYSQAVKHSHWRD 559
              S++ S+  N +   +YP+S+++SY+K +  H  F  +L+   EP SY++A K   W  
Sbjct: 812  -QSSSSSSSNNNTHVVSYPISHYLSYNKLSNDHLHFALSLTTHTEPKSYTEASKFDCWNK 870

Query: 560  AMQAEILALEVNNTWFL 610
            AM+ E+ ALE   TW L
Sbjct: 871  AMETELAALEQIGTWKL 887


>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score = 89.4 bits (220), Expect(2) = 8e-19
 Identities = 67/189 (35%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
 Frame = +2

Query: 71  FLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQ---TYAPNSD--SSLVLPLPIP- 232
           FLGYP  +  Y+L NL      ISRDV F E  FPFQ   +   +SD  S LVLPLPI  
Sbjct: 417 FLGYPPGYKAYKLLNLSTNTTFISRDVIFHESIFPFQNDDSQPCHSDFFSDLVLPLPISI 476

Query: 233 ---DTITPSDSPIXXXXXXXXXXXXXXXXXXXXXXXXITQPSRLRDYICPTLPSSNALST 403
              D+  PS SP                            PS L+DY C         ST
Sbjct: 477 SSNDSTNPSFSPTSLSLDHPTRSR--------------RAPSYLQDYHCS--------ST 514

Query: 404 HFNTSSGTAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYSQAVKHSHWRDAMQAEILA 583
            F  S  T +PLS  + Y K +  H   ++A+S + EP++Y++A      + AM  E+ A
Sbjct: 515 SF-ASQSTCHPLSQVLDYHKLSTPHTTLVNAISSNFEPTTYAEAAVIPKLQAAMSEELRA 573

Query: 584 LEVNNTWFL 610
           L+ N+TW L
Sbjct: 574 LKENSTWSL 582



 Score = 31.6 bits (70), Expect(2) = 8e-19
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +3

Query: 3   CLCYAHTIAANRDKFQPRADPCVF*DIPP 89
           CLCYA T+  +  KF P A   VF   PP
Sbjct: 394 CLCYASTLNHSHTKFPPHAIKAVFLGYPP 422


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
          Length = 1131

 Score = 87.4 bits (215), Expect(2) = 1e-18
 Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 5/187 (2%)
 Frame = +2

Query: 59   RSLCFLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQTYAPNSDSSLVLPLP---I 229
            R+  FLGYPS + GY+L +LE  KI ISR+VTF E  FP   +    +SSL    P   +
Sbjct: 762  RACVFLGYPSGYKGYKLLDLESNKIYISRNVTFHEDIFPMAKHQKMDESSLHFFPPKVTV 821

Query: 230  PDTITP--SDSPIXXXXXXXXXXXXXXXXXXXXXXXXITQPSRLRDYICPTLPSSNALST 403
            P   +P  S SP                          T P+ L+D+ C ++  S     
Sbjct: 822  PSAPSPNISSSPFSTLSPQISKRQR-------------TVPAHLKDFHCYSVHDS----- 863

Query: 404  HFNTSSGTAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYSQAVKHSHWRDAMQAEILA 583
                    AYP+S+ +SYS+ +  H A+++++++   P SY++  +   W ++   E+ A
Sbjct: 864  --------AYPISSTLSYSQISSHHLAYINSITNIPIPQSYAEVRQSKEWTESADKELDA 915

Query: 584  LEVNNTW 604
            +E N+TW
Sbjct: 916  MEENDTW 922



 Score = 33.1 bits (74), Expect(2) = 1e-18
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +3

Query: 3   CLCYAHTIAANRDKFQPRADPCVF*DIP 86
           CLCY  T    R KF PR+  CVF   P
Sbjct: 743 CLCYGSTSPKQRHKFMPRSRACVFLGYP 770


>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
          Length = 1243

 Score = 92.8 bits (229), Expect = 2e-18
 Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
 Frame = +2

Query: 47   STPCRSLCFLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQTYAPNSDSSLVLPLP 226
            S   ++  FLGYP    GY+L ++E + I ISR+V F E  FPF    P S   +   L 
Sbjct: 596  SPRAKAAVFLGYPFGFKGYKLLDIETRSISISRNVIFHEEIFPFSKTNPCSSPDISSDL- 654

Query: 227  IPDTITPSDSPIXXXXXXXXXXXXXXXXXXXXXXXXIT----QPSRLRDYICPTLPSSNA 394
              D + P  +                           T    QPS L+DY C  + S   
Sbjct: 655  FHDRVLPCIAADNDQSSSVLPRVVSQPPLQVAPSSRXTRVSKQPSYLKDYHCSLINSVAH 714

Query: 395  LSTHFNTSSGTAYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYSQAVKHSHWRDAMQAE 574
            + TH      T++P+ +F+SY K +P++  F  ++S   EPSS+++A +   WR AM  E
Sbjct: 715  VETH-----STSHPIQHFLSYDKLSPSYKLFSLSVSIISEPSSFAKAAEIPEWRAAMDCE 769

Query: 575  ILALEVNNTW 604
            + ALE N TW
Sbjct: 770  LEALEENKTW 779


>gb|KYP48432.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 624

 Score = 90.5 bits (223), Expect(2) = 2e-18
 Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 1/179 (0%)
 Frame = +2

Query: 71  FLGYPSNHGGYRLYNLEHKKIIISRDVTFVEHTFPFQTYAPNSDSSLVLPLPIPDTITPS 250
           F+ Y   + GY+L +L + ++ ISRDV F EH FPF+     + S         DTITP 
Sbjct: 408 FINYSQGYKGYKLLDLSNNQVFISRDVRFYEHIFPFKRTPTAAISE--------DTITPD 459

Query: 251 DSPIXXXXXXXXXXXXXXXXXXXXXXXXITQPSRLRDY-ICPTLPSSNALSTHFNTSSGT 427
            +P                         +  P+   +  +   LP+S   S++       
Sbjct: 460 ITP------------------------NLVNPNHEPEIDVDIDLPTSTPHSSNLQPLLSV 495

Query: 428 AYPLSNFISYSKFTPAHYAFLSALSHSLEPSSYSQAVKHSHWRDAMQAEILALEVNNTW 604
             PL  +  YS+   +H  F+  +S + EP +Y+QA+KH HWR A++ EI A EVNNTW
Sbjct: 496 RIPLLQY--YSRLFESHTHFICQISENFEPQTYNQAIKHKHWRQAIEDEIAAKEVNNTW 552



 Score = 28.9 bits (63), Expect(2) = 2e-18
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +3

Query: 6   LCYAHTIAANRDKFQPRADPCVF 74
           LCYA T  +NR KF PRA   VF
Sbjct: 386 LCYASTPLSNRHKFIPRATVDVF 408