BLASTX nr result
ID: Rehmannia27_contig00054482
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00054482
(435 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV32204.1| putative polyprotein [Oryza sativa Japonica Group] 136 1e-34
gb|AAT85127.1| putative polyprotein [Oryza sativa Japonica Group] 134 7e-34
gb|AAX96450.1| retrotransposon protein, putative, Ty3-gypsy sub-... 132 4e-33
gb|ABA97359.1| retrotransposon protein, putative, Ty3-gypsy subc... 132 4e-33
gb|ABA98260.1| retrotransposon protein, putative, Ty3-gypsy subc... 132 5e-33
emb|CAD39354.2| OSJNBa0059H15.5 [Oryza sativa Japonica Group] 132 5e-33
emb|CAE02842.3| OSJNBa0014F04.8 [Oryza sativa Japonica Group] 131 9e-33
gb|AAO38446.1| putative gag-pol polyprotein [Oryza sativa Japoni... 130 1e-32
gb|ABA97776.1| retrotransposon protein, putative, Ty3-gypsy subc... 130 1e-32
emb|CAE75972.1| B1160F02.3 [Oryza sativa Japonica Group] 130 1e-32
gb|AAX95471.1| Retrotransposon gag protein, putative [Oryza sati... 130 1e-32
gb|AAX95470.1| Retrotransposon gag protein, putative [Oryza sati... 130 1e-32
emb|CAH66529.1| H0502B11.9 [Oryza sativa Indica Group] 130 1e-32
gb|AAT69650.1| putative polyprotein [Oryza sativa Japonica Group] 130 1e-32
emb|CAE03548.2| OSJNBa0060D06.14 [Oryza sativa Japonica Group] 130 1e-32
gb|AAT93968.1| putative polyprotein [Oryza sativa Japonica Group... 130 1e-32
gb|AAX96525.1| retrotransposon protein, putative, Ty3-gypsy sub-... 130 1e-32
gb|ABA98232.1| retrotransposon protein, putative, Ty3-gypsy subc... 130 1e-32
dbj|BAB62635.1| putative polyprotein [Oryza sativa Japonica Grou... 130 1e-32
gb|AAL31078.1|AC091749_7 putative polyprotein [Oryza sativa Japo... 130 1e-32
>gb|AAV32204.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1142
Score = 136 bits (343), Expect = 1e-34
Identities = 64/126 (50%), Positives = 87/126 (69%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + LG K +N ILTEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 813 GKARDFLEDEHGTIWLGERLCVPDDKELKNLILTEAHQTQYSIHPGSTKMYQDLKEKFWW 872
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V Y CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 873 VSMRREIAEFVALYDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIRMDFITGLPRTSSGHD 932
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 933 SIWVVV 938
>gb|AAT85127.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 134 bits (337), Expect = 7e-34
Identities = 62/126 (49%), Positives = 87/126 (69%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ ILTEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 1063 GKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWW 1122
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V Y CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1123 VSMRREIAEFVALYDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 1182
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1183 SIWVVV 1188
>gb|AAX96450.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77549773|gb|ABA92570.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1723
Score = 132 bits (332), Expect = 4e-33
Identities = 63/126 (50%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F ++ + LG K ++ ILTEAHH++Y+IHP KMY+DLK+ F W
Sbjct: 1262 GKARDFHEDEHGTIWLGERLCVPDDKELKDLILTEAHHTQYSIHPGSTKMYQDLKEKFWW 1321
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1322 VSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 1381
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1382 SIWVVV 1387
>gb|ABA97359.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 795
Score = 132 bits (331), Expect = 4e-33
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ I+TEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 619 GKARGFVEDEQGTIWMGERLCVPENKELKDLIMTEAHQTQYSIHPGSTKMYQDLKEKFWW 678
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
VNM+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 679 VNMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 738
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 739 SIWVVV 744
>gb|ABA98260.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1360
Score = 132 bits (331), Expect = 5e-33
Identities = 62/126 (49%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ ILTEAH +RY+IHP KMY+DLK+ F W
Sbjct: 1094 GKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTRYSIHPGSTKMYQDLKEKFWW 1153
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1154 VSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSRHD 1213
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1214 SIWVVV 1219
>emb|CAD39354.2| OSJNBa0059H15.5 [Oryza sativa Japonica Group]
Length = 1466
Score = 132 bits (331), Expect = 5e-33
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ IL EAH ++Y+IHP KMY+DLK+ F W
Sbjct: 1101 GKARGFVEDEQGTIWMGERLCVPENKELKDLILIEAHQTQYSIHPGSTKMYQDLKEKFWW 1160
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V Y CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1161 VSMRREIAEFVALYDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 1220
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1221 SIWVVV 1226
>emb|CAE02842.3| OSJNBa0014F04.8 [Oryza sativa Japonica Group]
Length = 1429
Score = 131 bits (329), Expect = 9e-33
Identities = 62/127 (48%), Positives = 86/127 (67%)
Frame = +2
Query: 5 KGRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF* 184
+G+ F+ ++ R+ LG K ++ IL EAH + Y+IHP KMY+DLK+ F
Sbjct: 1166 RGKAISFLEDEQRTVWLGKRICIPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFW 1225
Query: 185 WVNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDH 364
W +MK ++A++V CQR+KAEHQ+P+GLLQPL IP+WKWE + +F+T PRT DH
Sbjct: 1226 WASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSDH 1285
Query: 365 DSIWVIV 385
DSIWVIV
Sbjct: 1286 DSIWVIV 1292
>gb|AAO38446.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|62733520|gb|AAX95637.1| Reverse transcriptase
(RNA-dependent DNA polymerase), putative [Oryza sativa
Japonica Group] gi|108710593|gb|ABF98388.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1229
Score = 130 bits (328), Expect = 1e-32
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ ILTEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 768 GKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWW 827
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 828 VSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 887
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 888 SIWVVV 893
>gb|ABA97776.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1406
Score = 130 bits (328), Expect = 1e-32
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ ILTEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 1113 GKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWW 1172
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1173 VSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 1232
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1233 SIWVVV 1238
>emb|CAE75972.1| B1160F02.3 [Oryza sativa Japonica Group]
Length = 1430
Score = 130 bits (328), Expect = 1e-32
Identities = 62/126 (49%), Positives = 85/126 (67%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + LG K ++ ILTEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 995 GKARDFLEDEHGTIWLGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWW 1054
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V M+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1055 VRMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSSHD 1114
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1115 SIWVVV 1120
>gb|AAX95471.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|108864031|gb|ABG22378.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1441
Score = 130 bits (328), Expect = 1e-32
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ ILTEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 980 GKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWW 1039
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1040 VSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 1099
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1100 SIWVVV 1105
>gb|AAX95470.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|108864030|gb|ABA91610.2| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1441
Score = 130 bits (328), Expect = 1e-32
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ ILTEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 980 GKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWW 1039
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1040 VSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 1099
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1100 SIWVVV 1105
>emb|CAH66529.1| H0502B11.9 [Oryza sativa Indica Group]
Length = 1450
Score = 130 bits (328), Expect = 1e-32
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ ILTEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 989 GKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWW 1048
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1049 VSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 1108
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1109 SIWVVV 1114
>gb|AAT69650.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1458
Score = 130 bits (328), Expect = 1e-32
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ ILTEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 997 GKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWW 1056
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1057 VSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 1116
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1117 SIWVVV 1122
>emb|CAE03548.2| OSJNBa0060D06.14 [Oryza sativa Japonica Group]
Length = 1458
Score = 130 bits (328), Expect = 1e-32
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ ILTEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 997 GKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWW 1056
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1057 VSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 1116
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1117 SIWVVV 1122
>gb|AAT93968.1| putative polyprotein [Oryza sativa Japonica Group]
gi|51038205|gb|AAT94008.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1500
Score = 130 bits (328), Expect = 1e-32
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ ILTEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 1039 GKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWW 1098
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1099 VSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 1158
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1159 SIWVVV 1164
>gb|AAX96525.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77550230|gb|ABA93027.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1506
Score = 130 bits (328), Expect = 1e-32
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ ILTEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 1045 GKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWW 1104
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1105 VSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 1164
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1165 SIWVVV 1170
>gb|ABA98232.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1522
Score = 130 bits (328), Expect = 1e-32
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ ILTEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 1061 GKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWW 1120
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1121 VSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 1180
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1181 SIWVVV 1186
>dbj|BAB62635.1| putative polyprotein [Oryza sativa Japonica Group]
gi|20804440|dbj|BAB92137.1| putative polyprotein [Oryza
sativa Japonica Group] gi|52353682|gb|AAU44248.1|
putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 130 bits (328), Expect = 1e-32
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ ILTEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 1063 GKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWW 1122
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1123 VSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 1182
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1183 SIWVVV 1188
>gb|AAL31078.1|AC091749_7 putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 130 bits (328), Expect = 1e-32
Identities = 61/126 (48%), Positives = 86/126 (68%)
Frame = +2
Query: 8 GRDRIFMWEQMRS*DLGVEFVCQMMKA*ENKILTEAHHSRYTIHPVGNKMYKDLKKSF*W 187
G+ R F+ ++ + +G K ++ ILTEAH ++Y+IHP KMY+DLK+ F W
Sbjct: 1063 GKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWW 1122
Query: 188 VNMKNQVAKHVEKYLTCQRMKAEHQRPSGLLQPLAIPQWKWERVTTNFVTNFPRT*CDHD 367
V+M+ ++A+ V CQR+KAEHQRP+GLLQPL IP+WKWE + +F+T PRT HD
Sbjct: 1123 VSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHD 1182
Query: 368 SIWVIV 385
SIWV+V
Sbjct: 1183 SIWVVV 1188