BLASTX nr result
ID: Rehmannia27_contig00051976
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00051976
(447 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP51629.1| Retrovirus-related Pol polyprotein from transposo... 137 2e-38
gb|KYP62795.1| Retrovirus-related Pol polyprotein from transposo... 139 7e-38
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 140 4e-36
gb|KYP68194.1| Retrovirus-related Pol polyprotein from transposo... 140 6e-36
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 140 9e-36
gb|KYP61041.1| Retrovirus-related Pol polyprotein from transposo... 139 1e-35
gb|KYP40816.1| Retrovirus-related Pol polyprotein from transposo... 138 3e-35
gb|KYP76882.1| Retrovirus-related Pol polyprotein from transposo... 129 3e-35
gb|KYP61332.1| Retrovirus-related Pol polyprotein from transposo... 137 5e-35
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 137 5e-35
gb|KYP49506.1| Retrovirus-related Pol polyprotein from transposo... 134 6e-35
ref|XP_014617557.1| PREDICTED: uncharacterized protein LOC102665... 137 7e-35
gb|KYP53968.1| Retrovirus-related Pol polyprotein from transposo... 128 2e-34
gb|KYP54917.1| Retrovirus-related Pol polyprotein from transposo... 130 2e-34
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo... 135 3e-34
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo... 135 4e-34
ref|XP_009801985.1| PREDICTED: uncharacterized protein LOC104247... 135 4e-34
gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposo... 135 5e-34
gb|KYP72197.1| Retrovirus-related Pol polyprotein from transposo... 131 5e-34
gb|KYP70315.1| Retrovirus-related Pol polyprotein from transposo... 134 5e-34
>gb|KYP51629.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 191
Score = 137 bits (345), Expect = 2e-38
Identities = 65/139 (46%), Positives = 92/139 (66%)
Frame = -1
Query: 441 NNKGVDDLQVWHRRLGHTSLSCLQHIPFLRPFYNKNVLDICNTCHEAKQCRLSFPLSTIH 262
NNK + WH RLGH S S L + PF +K++ + C+ CH +KQ + + +ST
Sbjct: 37 NNKNL-----WHLRLGHLSGSRLNLLHEQFPFISKHINETCDICHLSKQKKFPYSISTSR 91
Query: 261 TEQAFELIHIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALV 82
+ F+LIH+DIWGP+ +PS+ Y LTI+DDF+R TWI L+K K+EV H+ FIAL+
Sbjct: 92 ATKMFDLIHMDIWGPFSKPSIYGHKYFLTILDDFSRYTWIVLLKSKAEVQSHVQNFIALI 151
Query: 81 QNQFQRSVKGVRSDNGAEF 25
+NQF ++K +RSDNG EF
Sbjct: 152 ENQFHTTIKILRSDNGPEF 170
>gb|KYP62795.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 301
Score = 139 bits (350), Expect = 7e-38
Identities = 70/145 (48%), Positives = 87/145 (60%)
Frame = -1
Query: 447 VHNNKGVDDLQVWHRRLGHTSLSCLQHIPFLRPFYNKNVLDICNTCHEAKQCRLSFPLST 268
+H V + +WH RLGH S + + N N +CNTCH AKQ +L FPLS
Sbjct: 30 IHPKCNVIPIDLWHFRLGHLSSERMHIMQQQYSCLNNNKNFVCNTCHYAKQRKLPFPLSN 89
Query: 267 IHTEQAFELIHIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIA 88
H Q F LIH+DIWGPY S+ Y LTIVDD TR TW+YLM +KSE HI+ FI
Sbjct: 90 SHATQPFALIHMDIWGPYSTLSMNGHRYFLTIVDDHTRYTWVYLMCNKSETRTHITNFIN 149
Query: 87 LVQNQFQRSVKGVRSDNGAEFLSNQ 13
LV+NQF VK + +DNG EF ++
Sbjct: 150 LVENQFDTHVKIICTDNGNEFFMHE 174
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 140 bits (354), Expect = 4e-36
Identities = 67/132 (50%), Positives = 86/132 (65%), Gaps = 1/132 (0%)
Frame = -1
Query: 414 VWHRRLGHTSLSCLQHIPFLRPFYNKNVLD-ICNTCHEAKQCRLSFPLSTIHTEQAFELI 238
+WHRRLGH S + +P K +L+ +C+TC AKQ R +FPLS + +F+LI
Sbjct: 291 LWHRRLGHASDKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLI 350
Query: 237 HIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALVQNQFQRSV 58
H D+WGPY PS + Y LTIVDD++RG W+YLM KSE H+ FIALV+ QF +
Sbjct: 351 HCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDTEI 410
Query: 57 KGVRSDNGAEFL 22
K VRSDNG EFL
Sbjct: 411 KTVRSDNGTEFL 422
>gb|KYP68194.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 914
Score = 140 bits (353), Expect = 6e-36
Identities = 70/134 (52%), Positives = 88/134 (65%)
Frame = -1
Query: 414 VWHRRLGHTSLSCLQHIPFLRPFYNKNVLDICNTCHEAKQCRLSFPLSTIHTEQAFELIH 235
+WH RLGH Q + + PF N +C+ CH AKQ +LSFPLS+ T FELIH
Sbjct: 522 LWHYRLGHPCFDRSQALSEMFPFIYCNKNHVCDICHIAKQRKLSFPLSSSSTNTIFELIH 581
Query: 234 IDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALVQNQFQRSVK 55
DIWGP S+ SY LTIVDD++R TWIYL+K+K+EV I F ALV+NQFQ +VK
Sbjct: 582 ADIWGPVFVMSIHGHSYFLTIVDDYSRHTWIYLLKNKAEVRPLIQAFCALVENQFQTTVK 641
Query: 54 GVRSDNGAEFLSNQ 13
+R+DNG EF +Q
Sbjct: 642 TIRTDNGKEFKFDQ 655
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 140 bits (352), Expect = 9e-36
Identities = 67/132 (50%), Positives = 86/132 (65%), Gaps = 1/132 (0%)
Frame = -1
Query: 414 VWHRRLGHTSLSCLQHIPFLRPFYNKNVLD-ICNTCHEAKQCRLSFPLSTIHTEQAFELI 238
+WHRRLGH S + +P K +L+ +C+TC AKQ R +FPLS + +F+LI
Sbjct: 515 LWHRRLGHASDKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLI 574
Query: 237 HIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALVQNQFQRSV 58
H D+WGPY PS + Y LTIVDD++RG W+YLM KSE H+ FIALV+ QF +
Sbjct: 575 HCDVWGPYRAPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDTEI 634
Query: 57 KGVRSDNGAEFL 22
K VRSDNG EFL
Sbjct: 635 KIVRSDNGTEFL 646
>gb|KYP61041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 788
Score = 139 bits (351), Expect = 1e-35
Identities = 72/144 (50%), Positives = 89/144 (61%)
Frame = -1
Query: 447 VHNNKGVDDLQVWHRRLGHTSLSCLQHIPFLRPFYNKNVLDICNTCHEAKQCRLSFPLST 268
+H V + +WH RLGH S L+ + P+ N C+TCH +KQ +L F LS
Sbjct: 115 IHPVSIVVPIDLWHFRLGHPSCKRLESMMKQYPYITINKNFSCSTCHYSKQRKLLFSLSI 174
Query: 267 IHTEQAFELIHIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIA 88
T +AFE+IH+DIWGP S+ Y LTIVDDFTR TW+YLM KSE HI FI+
Sbjct: 175 SKTSRAFEIIHVDIWGPCSVISMHGHRYFLTIVDDFTRYTWVYLMNSKSETRKHIINFIS 234
Query: 87 LVQNQFQRSVKGVRSDNGAEFLSN 16
LV+ QF VK +RSDNGAEFL N
Sbjct: 235 LVERQFDTKVKIIRSDNGAEFLMN 258
>gb|KYP40816.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1298
Score = 138 bits (348), Expect = 3e-35
Identities = 68/139 (48%), Positives = 87/139 (62%)
Frame = -1
Query: 441 NNKGVDDLQVWHRRLGHTSLSCLQHIPFLRPFYNKNVLDICNTCHEAKQCRLSFPLSTIH 262
NN + +WH RLGH S S LQ I P+ + +C+ CH AKQC+LSFP+S
Sbjct: 530 NNMNNSNFDLWHYRLGHPSDSVLQQIKGQFPYVKYDHKLVCDYCHLAKQCKLSFPISINS 589
Query: 261 TEQAFELIHIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALV 82
T F+LIH+DIWGP S+ Y LTIVDDF+R TW++LMK KSE I FI+L
Sbjct: 590 TASCFDLIHMDIWGPLSICSIHGHKYFLTIVDDFSRNTWVFLMKAKSETRTLIQNFISLT 649
Query: 81 QNQFQRSVKGVRSDNGAEF 25
Q+++ VK +RSDNG EF
Sbjct: 650 FTQYKKKVKIIRSDNGIEF 668
>gb|KYP76882.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 187
Score = 129 bits (324), Expect = 3e-35
Identities = 67/138 (48%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Frame = -1
Query: 414 VWHRRLGHTSLSCLQ----HIPFLRPFYNKNVLDICNTCHEAKQCRLSFPLSTIHTEQAF 247
+WH RLGH S LQ H P++ YNKNV C+ CH KQ L FP ST + F
Sbjct: 45 LWHYRLGHPSHVVLQTMKIHFPYVT--YNKNVT--CDYCHFGKQTILPFPTSTTKSLSCF 100
Query: 246 ELIHIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALVQNQFQ 67
+L+H+DIWGP PS+ LT+VDD++R TWIY MK KSE I FI+ VQ QF
Sbjct: 101 DLVHMDIWGPLAIPSIHGHKNFLTVVDDYSRHTWIYFMKSKSETRNMIQNFISYVQTQFP 160
Query: 66 RSVKGVRSDNGAEFLSNQ 13
+ +K +RSDNG EF +Q
Sbjct: 161 KHIKVIRSDNGVEFAMDQ 178
>gb|KYP61332.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 622
Score = 137 bits (344), Expect = 5e-35
Identities = 66/139 (47%), Positives = 88/139 (63%)
Frame = -1
Query: 429 VDDLQVWHRRLGHTSLSCLQHIPFLRPFYNKNVLDICNTCHEAKQCRLSFPLSTIHTEQA 250
+ + +WH R+GH L + P N CNTCH AKQ +L FPLS HT ++
Sbjct: 181 IQSIDLWHFRMGHLPYEKLHSMKQYYPCLYSNKHFTCNTCHYAKQKKLPFPLSHSHTSKS 240
Query: 249 FELIHIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALVQNQF 70
F+L+HIDIWGP + S+ Y LTIVDD TR TW++LMK K+EV ++ FIA V+NQF
Sbjct: 241 FDLLHIDIWGPCSKISLHGHRYFLTIVDDHTRFTWVFLMKTKAEVRNCVTNFIAYVENQF 300
Query: 69 QRSVKGVRSDNGAEFLSNQ 13
+ VK +R+DNG EF N+
Sbjct: 301 ETQVKVIRTDNGVEFSMNK 319
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 137 bits (346), Expect = 5e-35
Identities = 65/132 (49%), Positives = 85/132 (64%), Gaps = 1/132 (0%)
Frame = -1
Query: 414 VWHRRLGHTSLSCLQHIPFLRPFYNKNVLD-ICNTCHEAKQCRLSFPLSTIHTEQAFELI 238
+WHRRLGH S + +P K +L+ +C+TC AKQ R +FPL + +F+LI
Sbjct: 291 LWHRRLGHASDKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLRDNRSMDSFQLI 350
Query: 237 HIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALVQNQFQRSV 58
H D+WGPY PS + Y LTIVDD++RG W+YLM KSE H+ F+ALV+ QF +
Sbjct: 351 HCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFMALVERQFDTEI 410
Query: 57 KGVRSDNGAEFL 22
K VRSDNG EFL
Sbjct: 411 KTVRSDNGTEFL 422
>gb|KYP49506.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 396
Score = 134 bits (336), Expect = 6e-35
Identities = 65/135 (48%), Positives = 87/135 (64%)
Frame = -1
Query: 429 VDDLQVWHRRLGHTSLSCLQHIPFLRPFYNKNVLDICNTCHEAKQCRLSFPLSTIHTEQA 250
+++ +WH RLGH S CL + PF +K+V D C+ H AKQ LS+ S +
Sbjct: 134 INNTNLWHFRLGHLSRKCLNILHMNFPFISKHVDDDCDIFHLAKQKCLSYSPSINRSCNL 193
Query: 249 FELIHIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALVQNQF 70
F+LIH+DIWGP+ PS + Y LTIVDDF+ TW+ L+K K EV HI FIAL++NQF
Sbjct: 194 FDLIHMDIWGPFSTPSFHSHKYFLTIVDDFSHFTWVVLLKSKGEVQKHIRNFIALIENQF 253
Query: 69 QRSVKGVRSDNGAEF 25
++K +RSDNG EF
Sbjct: 254 HTTIKCIRSDNGPEF 268
>ref|XP_014617557.1| PREDICTED: uncharacterized protein LOC102665992 [Glycine max]
Length = 898
Score = 137 bits (345), Expect = 7e-35
Identities = 68/141 (48%), Positives = 86/141 (60%)
Frame = -1
Query: 444 HNNKGVDDLQVWHRRLGHTSLSCLQHIPFLRPFYNKNVLDICNTCHEAKQCRLSFPLSTI 265
H V + +WH R+GH SL LQ + PF+N N +CNTCH AK RL F S
Sbjct: 523 HPKCKVIPINLWHFRMGHPSLERLQAMQSYYPFFNNNKNFMCNTCHYAKHKRLPFSSSIS 582
Query: 264 HTEQAFELIHIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIAL 85
H FEL+HIDIWGP + S+ Y LTI+DD++R TW +LM K+E I+ FIA
Sbjct: 583 HASNKFELLHIDIWGPCSKTSMHGHRYFLTIIDDYSRYTWTHLMHTKAETRKIITDFIAY 642
Query: 84 VQNQFQRSVKGVRSDNGAEFL 22
++ QF VK +RSDNGAEFL
Sbjct: 643 IETQFDSKVKTIRSDNGAEFL 663
>gb|KYP53968.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 207
Score = 128 bits (321), Expect = 2e-34
Identities = 61/142 (42%), Positives = 82/142 (57%), Gaps = 1/142 (0%)
Frame = -1
Query: 426 DDLQVWHRRLGHTSLSCLQHIPFLRPF-YNKNVLDICNTCHEAKQCRLSFPLSTIHTEQA 250
D +WH R+GH S L + F ++KN L+ C+ CH +KQCR F LS E
Sbjct: 49 DATNLWHARMGHPSDQILSQLSISLNFHFDKNKLECCDVCHRSKQCRFPFSLSNNKAETP 108
Query: 249 FELIHIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALVQNQF 70
F LIH D+W Y + Y LTIVDD+T+ W+YL+K KSE + F ++Q QF
Sbjct: 109 FALIHCDLWRKYYTMTHNGAHYFLTIVDDYTQAVWVYLLKEKSETPNILMNFCNMIQTQF 168
Query: 69 QRSVKGVRSDNGAEFLSNQTQS 4
R+VK VRSDNG +F +N Q+
Sbjct: 169 SRNVKAVRSDNGTKFTNNVIQT 190
>gb|KYP54917.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 277
Score = 130 bits (326), Expect = 2e-34
Identities = 62/130 (47%), Positives = 82/130 (63%)
Frame = -1
Query: 414 VWHRRLGHTSLSCLQHIPFLRPFYNKNVLDICNTCHEAKQCRLSFPLSTIHTEQAFELIH 235
+WH RLGH S+ LQ+I PF + + +C+ CH AKQ +L FP + F+LIH
Sbjct: 97 LWHFRLGHPSILVLQNICKHFPFIKFDSMKVCDYCHLAKQSKLPFPPGIHKSSAPFDLIH 156
Query: 234 IDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALVQNQFQRSVK 55
+DIWGP S+ Y LTIVDDFTR TW++LMK K E + + FI LVQ QF + +K
Sbjct: 157 MDIWGPLAISSIQGHKYFLTIVDDFTRHTWLFLMKSKHETRILVKNFITLVQTQFNKRIK 216
Query: 54 GVRSDNGAEF 25
+R+DNG EF
Sbjct: 217 ILRTDNGLEF 226
>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1316
Score = 135 bits (341), Expect = 3e-34
Identities = 68/145 (46%), Positives = 88/145 (60%)
Frame = -1
Query: 447 VHNNKGVDDLQVWHRRLGHTSLSCLQHIPFLRPFYNKNVLDICNTCHEAKQCRLSFPLST 268
VH + + +WH R+GH S LQ PFL + + CNTCH AKQ +L FPLS
Sbjct: 404 VHPKCSIQPIDLWHFRMGHLSHERLQSFPFL----SVDTSFSCNTCHHAKQKKLPFPLSH 459
Query: 267 IHTEQAFELIHIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIA 88
+ Q F+L+H+DIWGP S+ Y LTIVDD TR TW++LM++KSE HI FI
Sbjct: 460 SYASQPFDLLHMDIWGPCSVTSMHGHKYFLTIVDDHTRFTWLFLMQNKSETRQHIINFIN 519
Query: 87 LVQNQFQRSVKGVRSDNGAEFLSNQ 13
V+ QF + VK +R+DNG EF Q
Sbjct: 520 QVETQFDKHVKVIRTDNGLEFSMTQ 544
>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1427
Score = 135 bits (340), Expect = 4e-34
Identities = 68/136 (50%), Positives = 85/136 (62%), Gaps = 2/136 (1%)
Frame = -1
Query: 414 VWHRRLGHTSLSCLQHIPFLRPF--YNKNVLDICNTCHEAKQCRLSFPLSTIHTEQAFEL 241
+WH RLGH S LQ + L P+ YNKN+ C+ CH KQ RL FP ST + F+L
Sbjct: 490 LWHYRLGHPSHVVLQTVKRLFPYVTYNKNIT--CDYCHFGKQARLPFPTSTTKSLSCFDL 547
Query: 240 IHIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALVQNQFQRS 61
+H+DIWGP PS+ Y LTIVDD++R TWIY MK K E I FI+ VQ QF +
Sbjct: 548 VHMDIWGPLAIPSIHGHKYFLTIVDDYSRHTWIYFMKSKGETRNLIQNFISYVQTQFTKH 607
Query: 60 VKGVRSDNGAEFLSNQ 13
+K +RSDNG EF +Q
Sbjct: 608 IKVLRSDNGVEFAMDQ 623
>ref|XP_009801985.1| PREDICTED: uncharacterized protein LOC104247620 [Nicotiana
sylvestris]
Length = 686
Score = 135 bits (339), Expect = 4e-34
Identities = 66/135 (48%), Positives = 93/135 (68%), Gaps = 1/135 (0%)
Frame = -1
Query: 414 VWHRRLGHTSLSCLQHIPFLRP-FYNKNVLDICNTCHEAKQCRLSFPLSTIHTEQAFELI 238
+WH+RLGH ++ LQ IP L+ NK+ L+ C C A+Q R FP ST + +F+L+
Sbjct: 552 IWHQRLGHAPVAVLQKIPSLKTHLLNKDNLN-CIVCPLARQTRFPFPTSTKKSVCSFDLV 610
Query: 237 HIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALVQNQFQRSV 58
H+D+WGPY + + Y LTIVDD++R TWIYLMK KS+V L + F+ALV+NQF ++
Sbjct: 611 HMDVWGPYRQCTYNEYKYFLTIVDDYSRMTWIYLMKMKSDVFLLLISFLALVKNQFSTTI 670
Query: 57 KGVRSDNGAEFLSNQ 13
K +RSDNG EF ++Q
Sbjct: 671 KIIRSDNGLEFFNSQ 685
>gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1115
Score = 135 bits (339), Expect = 5e-34
Identities = 62/135 (45%), Positives = 91/135 (67%)
Frame = -1
Query: 429 VDDLQVWHRRLGHTSLSCLQHIPFLRPFYNKNVLDICNTCHEAKQCRLSFPLSTIHTEQA 250
+++ +WH RLGH S + L + PF +K+ ++C+ CH AKQ +LS+ S+ +
Sbjct: 190 INNSNLWHFRLGHLSSNRLNVLNQQFPFISKHSNEVCDVCHFAKQKKLSYSPSSSRVSKI 249
Query: 249 FELIHIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALVQNQF 70
F+LIH+DIWGP+ + S+ Y LTI+DDF+R TW+ L+K KSEV H+ FI LV+NQ+
Sbjct: 250 FDLIHMDIWGPFSKASIHGHKYFLTILDDFSRYTWVVLLKSKSEVKTHVHNFINLVENQY 309
Query: 69 QRSVKGVRSDNGAEF 25
+ VK +RSDNG EF
Sbjct: 310 ETKVKCIRSDNGPEF 324
>gb|KYP72197.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 384
Score = 131 bits (329), Expect = 5e-34
Identities = 66/141 (46%), Positives = 89/141 (63%), Gaps = 3/141 (2%)
Frame = -1
Query: 429 VDDLQVWHRRLGHTSLSCLQHIPFLRPFYNKNV---LDICNTCHEAKQCRLSFPLSTIHT 259
+D+ +WH RLGHTS L+H L YN V L C+TCH AKQ +L FP+S +
Sbjct: 60 IDNSMLWHLRLGHTSNKVLKH---LSSKYNDIVFYCLQPCDTCHYAKQKKLPFPVSNCKS 116
Query: 258 EQAFELIHIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALVQ 79
+ FELIH+DIWGP S+ Y L++VDDF+R TWI+L+K K +V + FI L++
Sbjct: 117 SRFFELIHVDIWGPVATTSIDGFKYFLSVVDDFSRFTWIHLIKTKFDVKFMLPSFIQLIE 176
Query: 78 NQFQRSVKGVRSDNGAEFLSN 16
NQF ++ +RSDNG EF N
Sbjct: 177 NQFTLKLQRIRSDNGKEFSLN 197
>gb|KYP70315.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 703
Score = 134 bits (338), Expect = 5e-34
Identities = 65/139 (46%), Positives = 87/139 (62%)
Frame = -1
Query: 429 VDDLQVWHRRLGHTSLSCLQHIPFLRPFYNKNVLDICNTCHEAKQCRLSFPLSTIHTEQA 250
+ + +WH R+GH L + P N CNTCH AKQ +L FPLS HT ++
Sbjct: 226 IQSIDLWHFRMGHLPYEKLHSMKQYYPCLYSNKHFTCNTCHYAKQKKLPFPLSHSHTSKS 285
Query: 249 FELIHIDIWGPYLEPSVTNTSYMLTIVDDFTRGTWIYLMKHKSEVHLHISKFIALVQNQF 70
F+L+HIDIWGP + S+ Y LTIVDD TR TW++LM K+EV ++ FIA V+NQF
Sbjct: 286 FDLLHIDIWGPCSKISLHGHRYFLTIVDDHTRFTWVFLMTTKAEVRNCVTNFIAYVENQF 345
Query: 69 QRSVKGVRSDNGAEFLSNQ 13
+ VK +R+DNG EF N+
Sbjct: 346 ETQVKVIRTDNGVEFSMNK 364