BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00051864
         (2437 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]  1036   0.0  
emb|CAN78655.1| hypothetical protein VITISV_010042 [Vitis vinifera]   944   0.0  
emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]   921   0.0  
emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]   914   0.0  
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   911   0.0  
gb|KYP44586.1| Retrovirus-related Pol polyprotein from transposo...   861   0.0  
emb|CAN66690.1| hypothetical protein VITISV_023209 [Vitis vinifera]   856   0.0  
emb|CAB75932.1| putative protein [Arabidopsis thaliana]               857   0.0  
emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera]   840   0.0  
gb|KYP79141.1| Retrovirus-related Pol polyprotein from transposo...   830   0.0  
gb|KYP74877.1| Retrovirus-related Pol polyprotein from transposo...   838   0.0  
gb|KYP71150.1| Retrovirus-related Pol polyprotein from transposo...   830   0.0  
gb|KYP77007.1| Retrovirus-related Pol polyprotein from transposo...   830   0.0  
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]   813   0.0  
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   805   0.0  
gb|AIC77183.1| polyprotein [Gossypium barbadense]                     800   0.0  
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   783   0.0  
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   783   0.0  
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   773   0.0  
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   771   0.0  

>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
          Length = 1283

 Score = 1036 bits (2679), Expect = 0.0
 Identities = 504/709 (71%), Positives = 588/709 (82%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TI+NMVR++L++  +P+SFWPEAV WSIHILNRSPTLVVQN+TP EAW+ R+PS+++FRI
Sbjct: 595  TILNMVRTILSKGHIPRSFWPEAVIWSIHILNRSPTLVVQNVTPXEAWNGRKPSVNHFRI 654

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FGCI+YAHIP +KR+KLDDKGEKCIFLGVS+ SKAYKLYNPI+KKI ISRD++FDE  +W
Sbjct: 655  FGCIAYAHIPXQKRKKLDDKGEKCIFLGVSEXSKAYKLYNPITKKIXISRDIIFDEGSFW 714

Query: 363  SWNNDGVQQQIPADFDXXXXXXXXXXXXXXLYPAATQNEERPQRARRRPTWMADYEVTGY 542
             W+++  +QQI A+FD              +  A     E P  A   PT          
Sbjct: 715  KWDDNTTKQQIQABFDGENEEERQQPLQQQIPXAEIPPNEAPTTAETSPT---------- 764

Query: 543  NQSEDPLIHFSLFSDCDPTTFEEAVKEPRWQKAMDEEIAAIERNNTWELTKLPKGHKTIG 722
                D  +   +  +CDPTTFE AVKE +W+KAMD EIAAIERN+TWEL++LPKGHKTIG
Sbjct: 765  TPEFDEQVEAXVGXNCDPTTFESAVKESKWRKAMDAEIAAIERNDTWELSELPKGHKTIG 824

Query: 723  VKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDYREVFAPVARLDTVRLLVALAAQNSW 902
            VKWVYKTKLKENGEVDKY+ARLVAKGYKQEFGVDY+EVFAPVAR DT+RL++ALAAQNSW
Sbjct: 825  VKWVYKTKLKENGEVDKYKARLVAKGYKQEFGVDYKEVFAPVARHDTIRLVIALAAQNSW 884

Query: 903  PIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEHKVYKLKKALYGLKQAPRAWYSRIDA 1082
            PIFQLDV SAFLHGNL+EQVF+DQPPGY+++  EHKVY+LKKALYGLKQAPRAWYSRI+A
Sbjct: 885  PIFQLDVXSAFLHGNLEEQVFVDQPPGYIKVKNEHKVYRLKKALYGLKQAPRAWYSRIEA 944

Query: 1083 YFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDDLIYTGSDSAMFVKFKKSMMDEFDMS 1262
            YF KEGF+KCPYEHTL+ K+ +GGK+LI+CLYVDD+I+TG+DS MF +FKKSMM EF+MS
Sbjct: 945  YFLKEGFQKCPYEHTLFVKVSNGGKMLIVCLYVDDIIFTGNDSVMFERFKKSMMVEFEMS 1004

Query: 1263 DLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRFQMQNCNSASTPIEVGLKLIKDSDEE 1442
            DL          V QSD GIFISQKKYV+EILNRFQM++CN  STP + GLKL KD   +
Sbjct: 1005 DL----------VVQSDTGIFISQKKYVREILNRFQMKDCNPVSTPTQFGLKLNKDHGGK 1054

Query: 1443 KVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYMECPREMHLLAAKRILRYLQGTSDYE 1622
            KVD   YKQIVGSLMYLTATRPDIM+ VSLISRYME P E+H LAAK+I RYLQGT D+ 
Sbjct: 1055 KVDXIIYKQIVGSLMYLTATRPDIMHSVSLISRYMENPTELHFLAAKKICRYLQGTKDFG 1114

Query: 1623 LFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFMLGLGAISWSSKKQSIVTLSTTEAEF 1802
            LFYKKG+ S L+ FTDSDYAGD D+R+STSGYVFMLG GA+SWSSKKQ IVTLSTTEAEF
Sbjct: 1115 LFYKKGKRSDLIGFTDSDYAGDQDNRRSTSGYVFMLGTGAVSWSSKKQPIVTLSTTEAEF 1174

Query: 1803 VAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNSSTIKLSKNPVLHGRSKHIDVKFYFL 1982
            VAAT C CQAIWLRKILEE+H KQ G T I+CDNSSTIKLSKNPVLHGRSKHIDVK+YFL
Sbjct: 1175 VAATACACQAIWLRKILEELHLKQVGATTIFCDNSSTIKLSKNPVLHGRSKHIDVKYYFL 1234

Query: 1983 RDLSRDGVINLIYCRSEDQIADIFTKSLKLTSFVKLRKLLGLCTLEDAI 2129
            R+LS DGVI+L+YCRSE+Q+ADIFTK LKL +F+KLRKLLG+ TLED+I
Sbjct: 1235 RELSNDGVIDLVYCRSENQVADIFTKPLKLAAFLKLRKLLGVSTLEDSI 1283


>emb|CAN78655.1| hypothetical protein VITISV_010042 [Vitis vinifera]
          Length = 870

 Score =  944 bits (2440), Expect = 0.0
 Identities = 466/660 (70%), Positives = 535/660 (81%)
 Frame = +3

Query: 135  EEAWSRRRPSMDYFRIFGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISK 314
            EEAWS R+P +D+FRIFGCI+YAHIPDEKRR LD+KGEKCIFLGVSD+SKAYKLYNP + 
Sbjct: 232  EEAWSGRKPVVDHFRIFGCIAYAHIPDEKRRNLDNKGEKCIFLGVSDKSKAYKLYNPNTM 291

Query: 315  KIIISRDVVFDEEKYWSWNNDGVQQQIPADFDXXXXXXXXXXXXXXLYPAATQNEERPQR 494
             I+ISRDVVFDE+  WSW  +GV++ IP DFD               +    +NE+    
Sbjct: 292  IIVISRDVVFDEKGTWSWKQNGVKENIPVDFDDDEK-----------WQQPMENEQ---- 336

Query: 495  ARRRPTWMADYEVTGYNQSEDPLIHFSLFSDCDPTTFEEAVKEPRWQKAMDEEIAAIERN 674
                     + EVTG +Q +DPL +F+LFS CDPT FE AVKEP+W+K MD EI AIERN
Sbjct: 337  ---------EKEVTGVDQGDDPLTYFALFSYCDPTIFETAVKEPKWRKTMDAEITAIERN 387

Query: 675  NTWELTKLPKGHKTIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDYREVFAPVAR 854
            +TWEL  LPK  KTIGVKWVYKTKLKENGEVDK++ARLVAKGYKQEFGVDY+EVFAPVAR
Sbjct: 388  DTWELCDLPKRQKTIGVKWVYKTKLKENGEVDKHKARLVAKGYKQEFGVDYKEVFAPVAR 447

Query: 855  LDTVRLLVALAAQNSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEHKVYKLKKAL 1034
             DT+RL++A+A QNSW IFQLDVKSAFLHG+L E+V IDQPPGY ++G EHKV KLKKAL
Sbjct: 448  HDTIRLVIAMAXQNSWLIFQLDVKSAFLHGDLKEEVIIDQPPGYAKLGNEHKVXKLKKAL 507

Query: 1035 YGLKQAPRAWYSRIDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDDLIYTGSDSA 1214
            YGLKQAP AWY+RI+ YF  EGF+KCPYEHTL+ KIED GK+LI+CLYVDDLIY G+++A
Sbjct: 508  YGLKQAPWAWYNRIETYFLNEGFQKCPYEHTLFIKIEDEGKMLIVCLYVDDLIYXGNNTA 567

Query: 1215 MFVKFKKSMMDEFDMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRFQMQNCNSAS 1394
            MF  FKKSM  EF+MSDLG MHYFLGIEV QS  GIFISQKK V EIL+R QM++CN  +
Sbjct: 568  MFESFKKSMXAEFEMSDLGMMHYFLGIEVMQSSTGIFISQKKCVGEILDRIQMKDCNPVN 627

Query: 1395 TPIEVGLKLIKDSDEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYMECPREMHLL 1574
            TP E G+KL KD+  + VD T YK+IVGSLMYLTATRPDIM+VVS+IS YMECP E+HLL
Sbjct: 628  TPSEFGMKLNKDNGGKNVDDTLYKEIVGSLMYLTATRPDIMHVVSVISIYMECPTEIHLL 687

Query: 1575 AAKRILRYLQGTSDYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFMLGLGAISWS 1754
            AAKRI  YLQGT ++ LFYK GE S L  FTDSDYAGDLDDRKSTSGYV M+G GA+SWS
Sbjct: 688  AAKRIFWYLQGTKEFGLFYKNGEKSDLFGFTDSDYAGDLDDRKSTSGYVLMMGTGAVSWS 747

Query: 1755 SKKQSIVTLSTTEAEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNSSTIKLSKNP 1934
            S KQ IVTLS+ EAEFVAATTC  QAIWL+KIL+E+HFK+E PT IYCDNSS IKLSKNP
Sbjct: 748  SXKQPIVTLSSIEAEFVAATTCAFQAIWLKKILKELHFKEERPTQIYCDNSSAIKLSKNP 807

Query: 1935 VLHGRSKHIDVKFYFLRDLSRDGVINLIYCRSEDQIADIFTKSLKLTSFVKLRKLLGLCT 2114
            VLHGRSKHIDVK++FLRDL  DGVINLIY R+EDQI DI TKSLK  +F K  KLLG+CT
Sbjct: 808  VLHGRSKHIDVKYHFLRDLXNDGVINLIYYRNEDQITDILTKSLKFPTFQKFGKLLGVCT 867


>emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]
          Length = 1041

 Score =  921 bits (2380), Expect = 0.0
 Identities = 459/669 (68%), Positives = 530/669 (79%), Gaps = 11/669 (1%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TIMNMVRSLLT SG+PKSFW EAVNWSIHILNRSPTLVVQNMTP+EAWS R+  +++FRI
Sbjct: 409  TIMNMVRSLLTTSGIPKSFWLEAVNWSIHILNRSPTLVVQNMTPKEAWSGRKLVVNHFRI 468

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FGCI+YA+IPDEKRRKLD+KGEKCIFLGVSD+ KAYKLYNP + KI++SRDVVFDE+  W
Sbjct: 469  FGCIAYAYIPDEKRRKLDNKGEKCIFLGVSDKLKAYKLYNPSTMKIVLSRDVVFDEKDTW 528

Query: 363  SWNNDGVQQQIPADFDXXXXXXXXXXXXXX-----------LYPAATQNEERPQRARRRP 509
            SW  +GV++ IP DFD                           P AT+++ RPQR R+RP
Sbjct: 529  SWKQNGVKENIPVDFDDDEKWQQPMENEQEEEVTQNVPIVDQSPLATESQ-RPQRVRKRP 587

Query: 510  TWMADYEVTGYNQSEDPLIHFSLFSDCDPTTFEEAVKEPRWQKAMDEEIAAIERNNTWEL 689
             WM ++EVTG +Q EDPL +F++FSDCD   FE AVKEP+W+KAMD EIAAIERN+TWEL
Sbjct: 588  AWMTNHEVTGVDQGEDPLTYFAMFSDCDLIIFETAVKEPKWRKAMDAEIAAIERNDTWEL 647

Query: 690  TKLPKGHKTIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDYREVFAPVARLDTVR 869
              LPKG KTIGVKWVYKTKLKENGEVDK++A LVAKGYKQEFGVDY+EVFA +AR DT++
Sbjct: 648  CDLPKGQKTIGVKWVYKTKLKENGEVDKHKACLVAKGYKQEFGVDYKEVFASIARHDTIK 707

Query: 870  LLVALAAQNSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEHKVYKLKKALYGLKQ 1049
            LL              DVK AFLHG+L E+VFIDQP GY ++G EHKVYKLKKALYGLKQ
Sbjct: 708  LL--------------DVKLAFLHGDLKEEVFIDQPLGYAKLGNEHKVYKLKKALYGLKQ 753

Query: 1050 APRAWYSRIDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDDLIYTGSDSAMFVKF 1229
             PRAWY+RI+ YF KEGF+KCPYEHTL+ KIEDGGK+ I+CLYVDDLIYTG+++AMF  F
Sbjct: 754  TPRAWYNRIETYFLKEGFQKCPYEHTLFIKIEDGGKMHIVCLYVDDLIYTGNNTAMFESF 813

Query: 1230 KKSMMDEFDMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRFQMQNCNSASTPIEV 1409
            KKSMM EF+MSDLG MHYFLGIE+ Q   GI ISQKKYV EIL+RFQM++CN  +TP E 
Sbjct: 814  KKSMMAEFEMSDLGMMHYFLGIEMMQYSTGILISQKKYVGEILDRFQMKDCNPVNTPSEF 873

Query: 1410 GLKLIKDSDEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYMECPREMHLLAAKRI 1589
            G+KL KD+  +KVD T YKQIVGSLMYLT T PDIM+VVS+ISRYME P E+HLLAAKRI
Sbjct: 874  GMKLNKDNGGKKVDDTLYKQIVGSLMYLTITIPDIMHVVSVISRYMEYPTEIHLLAAKRI 933

Query: 1590 LRYLQGTSDYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFMLGLGAISWSSKKQS 1769
             RYL+                     DSDYAGDLDDRKSTSGYVFM+G G +SWSSKKQ 
Sbjct: 934  FRYLK---------------------DSDYAGDLDDRKSTSGYVFMMGTGVVSWSSKKQP 972

Query: 1770 IVTLSTTEAEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNSSTIKLSKNPVLHGR 1949
            IVTLS+TEAEFV A  C CQAIWL+KIL+E+HFK+E PT IYCDNS TIKLSKNPVLHGR
Sbjct: 973  IVTLSSTEAEFVVAIACACQAIWLKKILKELHFKEERPTQIYCDNSLTIKLSKNPVLHGR 1032

Query: 1950 SKHIDVKFY 1976
            SKHIDVK++
Sbjct: 1033 SKHIDVKYH 1041


>emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]
          Length = 1278

 Score =  914 bits (2361), Expect = 0.0
 Identities = 457/730 (62%), Positives = 551/730 (75%), Gaps = 21/730 (2%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TI+NMVRSLL R  +PKSFWP AVNWSIH+LNRSPT  VQNMTPEEAW+           
Sbjct: 560  TILNMVRSLLXRGKIPKSFWPXAVNWSIHVLNRSPTFSVQNMTPEEAWN----------- 608

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
                       EKR+KLDDKGEKC+FL  S+ SKAYKL+NP++KKI+ SRDV+F EE  W
Sbjct: 609  -----------EKRKKLDDKGEKCVFLXXSEASKAYKLFNPLTKKIVTSRDVIFXEESTW 657

Query: 363  SWN----------NDG-------VQQQIPADFDXXXXXXXXXXXXXXLYPAATQN---EE 482
            +WN          ND        +QQ+IP                      A  N   E 
Sbjct: 658  NWNGQXPTQVIFDNDAEEERQQLLQQRIPTVSIPKSPPNDASTATETSSTPAESNVVAES 717

Query: 483  RPQRARRRPTWMADYEVTGYNQSE-DPLIHFSLFSDCDPTTFEEAVKEPRWQKAMDEEIA 659
            R +R R+RP WM D+EVTG      D + H++L SDCDP TF+EA+K+ +W KAM+EEI 
Sbjct: 718  RLRRVRKRPAWMQDFEVTGVQSDNYDTIAHYALLSDCDPITFQEAIKDLKWHKAMNEEIG 777

Query: 660  AIERNNTWELTKLPKGHKTIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDYREVF 839
            +IE+NN+WEL +LPKG K+IGVKWVYKTKL ++G VDKY+A LVAKGYKQEFGVDY+ VF
Sbjct: 778  SIEKNNSWELVELPKGQKSIGVKWVYKTKLNKDGGVDKYKAXLVAKGYKQEFGVDYKXVF 837

Query: 840  APVARLDTVRLLVALAAQNSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEHKVYK 1019
            APVA+LDT+ L++++AAQNSW I QLDVKSAFLHG L+E+V+IDQPPGYV+ G E++VYK
Sbjct: 838  APVAKLDTIXLVLSMAAQNSWSIHQLDVKSAFLHGXLEEEVYIDQPPGYVKQGYENQVYK 897

Query: 1020 LKKALYGLKQAPRAWYSRIDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDDLIYT 1199
            LKKALYGLKQAPRAWYSRIDAYF +EGF KCPYEHTLYTK     KILI+CLYVDDLIYT
Sbjct: 898  LKKALYGLKQAPRAWYSRIDAYFIEEGFIKCPYEHTLYTKYGVDKKILIVCLYVDDLIYT 957

Query: 1200 GSDSAMFVKFKKSMMDEFDMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRFQMQN 1379
             ++  M   FKKSMM  FDM+D+G MHYFLGIEV QS  G+FISQKKY  EIL++F +++
Sbjct: 958  SNNKTMLADFKKSMMKXFDMTDMGLMHYFLGIEVVQSSAGVFISQKKYALEILDKFMLKD 1017

Query: 1380 CNSASTPIEVGLKLIKDSDEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYMECPR 1559
            CNS  TP EVGLKL K    ++VDST YKQIVGSLMYLT+TRPDIM+ V+LI RYME P 
Sbjct: 1018 CNSVITPSEVGLKLSKSGAXKRVDSTLYKQIVGSLMYLTSTRPDIMHAVNLIXRYMENPT 1077

Query: 1560 EMHLLAAKRILRYLQGTSDYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFMLGLG 1739
            E+HLLAAKRI  YL+GT D+ + YK+GE SSL+ F+DSDYA DLDDRKSTS  VFML  G
Sbjct: 1078 EVHLLAAKRIFXYLKGTVDFGILYKRGERSSLIGFSDSDYAXDLDDRKSTSXAVFMLNSG 1137

Query: 1740 AISWSSKKQSIVTLSTTEAEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNSSTIK 1919
            AI+WSSK Q IVTLSTTE EFVA  +  CQAIWLR++LE ++ +Q+GPT IYCDN S IK
Sbjct: 1138 AITWSSKXQQIVTLSTTEVEFVAXASSSCQAIWLRRLLEVLYNQQQGPTVIYCDNLSAIK 1197

Query: 1920 LSKNPVLHGRSKHIDVKFYFLRDLSRDGVINLIYCRSEDQIADIFTKSLKLTSFVKLRKL 2099
            LSKN VLHGRSKHIDV+++FLRDL +DGVI+L++C+SEDQIADI TK LK   F+KLR +
Sbjct: 1198 LSKNLVLHGRSKHIDVRYHFLRDLCKDGVIDLVFCKSEDQIADILTKPLKPVVFMKLRSM 1257

Query: 2100 LGLCTLEDAI 2129
            LG+C+ ++ +
Sbjct: 1258 LGVCSSKEVV 1267


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  911 bits (2355), Expect = 0.0
 Identities = 443/728 (60%), Positives = 553/728 (75%), Gaps = 25/728 (3%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TIMNMVRS+L+   +PK+FWPEAVNW++H+LNRSPTL V+N TPEEAWS R+PS+D+FRI
Sbjct: 357  TIMNMVRSMLSEKQIPKTFWPEAVNWTVHVLNRSPTLAVKNKTPEEAWSGRKPSVDHFRI 416

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FGCIS+ H+PD KR KLD K  +CI LGVS++SKAY+L++PIS+KIIISRDVVF+E++ W
Sbjct: 417  FGCISHVHVPDHKRVKLDAKSLRCILLGVSEESKAYRLFDPISQKIIISRDVVFEEDQQW 476

Query: 363  SWNN----------------------DGVQQQIPADFDXXXXXXXXXXXXXXLYPAATQN 476
             W+N                      DG +++  A  D                     +
Sbjct: 477  KWDNSHEPAILADLEWESDEETDTEDDGNEEEPEAGEDMGNSESNDSDSFENGETTYEDS 536

Query: 477  EERPQRARRRPTWMADYEVTGYNQSEDP---LIHFSLFSDCDPTTFEEAVKEPRWQKAMD 647
                 R RR PTWM DYE TG   S++    L   +LF+D DPTT+++AV+  +W+ AM+
Sbjct: 537  TPHEGRTRRPPTWMQDYE-TGAGLSDEESVNLAQLALFTDSDPTTYDDAVRSEKWRLAMN 595

Query: 648  EEIAAIERNNTWELTKLPKGHKTIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDY 827
            +EI AIERNNTWELT LP G KTIGVKW++KTKL ENGEVDKY+ARLVAKGY Q++G DY
Sbjct: 596  QEIEAIERNNTWELTDLPSGGKTIGVKWIFKTKLNENGEVDKYKARLVAKGYSQQYGXDY 655

Query: 828  REVFAPVARLDTVRLLVALAAQNSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEH 1007
             EVFAPVARL+T+R++++LAAQ  W I+QLDVKSAFLHG + E+ F++QPPGY + G+E 
Sbjct: 656  VEVFAPVARLETIRIVISLAAQKDWMIYQLDVKSAFLHGEIHEEXFVEQPPGYEQKGKES 715

Query: 1008 KVYKLKKALYGLKQAPRAWYSRIDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDD 1187
            KVY+LKKALYGLKQAPRAWYSRI++YF KEGF KCPYEHTL+TK  +GGKILI+CLYVD+
Sbjct: 716  KVYRLKKALYGLKQAPRAWYSRIESYFIKEGFNKCPYEHTLFTKTAEGGKILIVCLYVDE 775

Query: 1188 LIYTGSDSAMFVKFKKSMMDEFDMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRF 1367
            LI+TG+D +MF +FKKSMM EFDM+DL  + YFLGIEV Q   GIFI+Q+KY QE+L RF
Sbjct: 776  LIFTGNDESMFKQFKKSMMVEFDMTDLEKLRYFLGIEVMQKTDGIFINQRKYAQEVLERF 835

Query: 1368 QMQNCNSASTPIEVGLKLIKDSDEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYM 1547
             +  CN    P+  G KL +D +  +VD T YKQ+VGSLMYLTATRPD+M+ VSLISRYM
Sbjct: 836  NLYQCNPVHNPVVPGFKLTRDKEGVEVDGTLYKQMVGSLMYLTATRPDLMFSVSLISRYM 895

Query: 1548 ECPREMHLLAAKRILRYLQGTSDYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFM 1727
            E P E HLLAAKRILRY++GT ++ +FYKKG +   + +TDSDYAGD DDRKSTSGYVFM
Sbjct: 896  EHPTESHLLAAKRILRYVKGTVEFGVFYKKGGDDKFIGYTDSDYAGDHDDRKSTSGYVFM 955

Query: 1728 LGLGAISWSSKKQSIVTLSTTEAEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNS 1907
                A+SWSSKKQ +VTLSTTEAEF+AA +  CQA+WLR+IL+ ++  Q  PT IYCDN 
Sbjct: 956  -NSSAVSWSSKKQPVVTLSTTEAEFIAAASSACQAVWLRRILKSLNQVQTSPTVIYCDNV 1014

Query: 1908 STIKLSKNPVLHGRSKHIDVKFYFLRDLSRDGVINLIYCRSEDQIADIFTKSLKLTSFVK 2087
            S IKLSKNPV+H RSKHIDV+F+FLRDL +D V+ L+ C + +QIADI TK LKL +F K
Sbjct: 1015 SAIKLSKNPVMHSRSKHIDVRFHFLRDLIKDEVVELLQCSTHEQIADIMTKPLKLEAFQK 1074

Query: 2088 LRKLLGLC 2111
            LR L+G+C
Sbjct: 1075 LRGLMGIC 1082


>gb|KYP44586.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 783

 Score =  861 bits (2224), Expect = 0.0
 Identities = 422/733 (57%), Positives = 539/733 (73%), Gaps = 25/733 (3%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TI+NMVRS+L   GVPK+FWPEAV W++H+LNRSPTL V+++TPEEAWS  +PS+ YFRI
Sbjct: 46   TIINMVRSVLGEKGVPKAFWPEAVMWAVHVLNRSPTLAVKDITPEEAWSGIKPSVSYFRI 105

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FGCI YA++ +++R KLDDK  KC+ LGVS++SKAYKLY+P+ KKI+ISRDV F E+  W
Sbjct: 106  FGCIGYAYVHNQQRSKLDDKSTKCVLLGVSEESKAYKLYDPVKKKILISRDVKFQEDAAW 165

Query: 363  SWN---NDGV----------------------QQQIPADFDXXXXXXXXXXXXXXLYPAA 467
             W+   N  +                      +    A                   PAA
Sbjct: 166  DWSEAKNSSILDTGELNPLEESSQVAEEKTQDKSNDTAATSSATTTNSSSNVPDYSVPAA 225

Query: 468  TQNEERPQRARRRPTWMADYEVTGYNQSEDPLIHFSLFSDCDPTTFEEAVKEPRWQKAMD 647
            +++ ++  R RR PTWM DY VTG   +E+  ++F++F+  DP T+ +A K   W+ AMD
Sbjct: 226  SESHDQG-RTRRPPTWMRDY-VTGDALTEEDAMNFAMFAGADPVTYNQASKSQHWRNAMD 283

Query: 648  EEIAAIERNNTWELTKLPKGHKTIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDY 827
             EI AI+RN+TW+L   P   K IGVKW++KTKLKE GE+DK++ARLVAKGY QE G+DY
Sbjct: 284  AEIQAIQRNDTWQLVDPPSNCKVIGVKWIFKTKLKETGEIDKFKARLVAKGYTQEEGIDY 343

Query: 828  REVFAPVARLDTVRLLVALAAQNSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEH 1007
             E+FAPVARL+TVR ++A+AA   W I+QLD+KSAFLHG ++E V+++QPPGYV  G EH
Sbjct: 344  GEIFAPVARLETVRTVIAIAATKRWSIYQLDIKSAFLHGEINEDVYLEQPPGYVCQGREH 403

Query: 1008 KVYKLKKALYGLKQAPRAWYSRIDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDD 1187
            +VYKLKKALYGLKQAPRAWYS+++++    GF KCP+EHTL+ K ++G +ILI+C YVDD
Sbjct: 404  QVYKLKKALYGLKQAPRAWYSKLESHLVTNGFLKCPHEHTLFLK-KEGSEILIVCFYVDD 462

Query: 1188 LIYTGSDSAMFVKFKKSMMDEFDMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRF 1367
            LIYTGSD  MF +FK  MM+EF M+DLG M YFLGIEV QS  GI+I QKKY++++LNRF
Sbjct: 463  LIYTGSDELMFQQFKTIMMNEFAMTDLGKMRYFLGIEVLQSCTGIYIGQKKYIKDMLNRF 522

Query: 1368 QMQNCNSASTPIEVGLKLIKDSDEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYM 1547
             M +CNS   PI  G +L+K+    +VDST YKQ+VGSLMYLTATRPDI + VSLISR+M
Sbjct: 523  DMSDCNSVKNPIAPGTRLLKEDKGTEVDSTIYKQLVGSLMYLTATRPDIAHSVSLISRFM 582

Query: 1548 ECPREMHLLAAKRILRYLQGTSDYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFM 1727
            E P+E H +AAKRILRYLQGT +  +FYK G N  L  +TDSDYAGDL+DRKSTSGY F+
Sbjct: 583  EHPKESHFIAAKRILRYLQGTQNLGIFYKAGINEELFAYTDSDYAGDLEDRKSTSGYAFL 642

Query: 1728 LGLGAISWSSKKQSIVTLSTTEAEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNS 1907
            L  G ISW SKKQ +V+LSTTEAEF+AA  C CQ +WLR+ILE +   Q G T ++CDN 
Sbjct: 643  LAGGVISWVSKKQPVVSLSTTEAEFIAAALCACQCVWLRRILEHLDHYQVGATVMFCDNV 702

Query: 1908 STIKLSKNPVLHGRSKHIDVKFYFLRDLSRDGVINLIYCRSEDQIADIFTKSLKLTSFVK 2087
            STIKLSKNPVLHGRSKHIDV+F+FLR+L  DGVI L +C +++Q+ADI TK LK+  F +
Sbjct: 703  STIKLSKNPVLHGRSKHIDVRFHFLRNLCNDGVIELNFCSTKNQLADIMTKPLKVEDFQR 762

Query: 2088 LRKLLGLCTLEDA 2126
            LR  LG+  LED+
Sbjct: 763  LRSALGM--LEDS 773


>emb|CAN66690.1| hypothetical protein VITISV_023209 [Vitis vinifera]
          Length = 1202

 Score =  856 bits (2212), Expect = 0.0
 Identities = 434/713 (60%), Positives = 522/713 (73%), Gaps = 4/713 (0%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TI+NMVRSLL R  +PKSFWPEAVNWSIH+LNRSPT  VQNMTPEEAWS  +P++D+F+I
Sbjct: 529  TILNMVRSLLARGKIPKSFWPEAVNWSIHVLNRSPTFXVQNMTPEEAWSGXKPAVDHFKI 588

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FGCI+YAH+PDEKR+KLDDKGEKC+FLG   Q                   V+FD +   
Sbjct: 589  FGCIAYAHVPDEKRKKLDDKGEKCVFLGQPTQ-------------------VIFDNDXEE 629

Query: 363  SWNNDGVQQQIPADFDXXXXXXXXXXXXXXLYPAATQN---EERPQRARRRPTWMADYEV 533
                  +QQQIP                     AA  N   E R +R R+RP WM D+EV
Sbjct: 630  E-RQQLLQQQIPTVSIPESPPNDAPTXAETSSTAAESNVVAESRLRRVRKRPAWMQDFEV 688

Query: 534  TGYNQSE-DPLIHFSLFSDCDPTTFEEAVKEPRWQKAMDEEIAAIERNNTWELTKLPKGH 710
            TG      D + H++L SDCDP TF+EA+K+ +W KAM+EEI +IE+NN+WEL +LPKG 
Sbjct: 689  TGVQSDNYDTIAHYALLSDCDPITFQEAIKDLKWHKAMNEEIGSIEKNNSWELVELPKGQ 748

Query: 711  KTIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDYREVFAPVARLDTVRLLVALAA 890
            K+IGVKWVYKTKL ++G VDKY+ARLVAKGYKQEF                         
Sbjct: 749  KSIGVKWVYKTKLNKDGGVDKYKARLVAKGYKQEFRSG---------------------- 786

Query: 891  QNSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEHKVYKLKKALYGLKQAPRAWYS 1070
                   Q DVKSAFLHG L+E+V+IDQPPGYV+ G E++ YKLKKALYGLKQAPRAWYS
Sbjct: 787  ------LQRDVKSAFLHGELEEEVYIDQPPGYVKQGYENQXYKLKKALYGLKQAPRAWYS 840

Query: 1071 RIDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDDLIYTGSDSAMFVKFKKSMMDE 1250
            RIDAYF++EGF KCPYEHTLYTK     KILI+CLYVDDLIYT ++  M   FKKSMM E
Sbjct: 841  RIDAYFTEEGFIKCPYEHTLYTKYGVDKKILIVCLYVDDLIYTSNNKTMLADFKKSMMKE 900

Query: 1251 FDMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRFQMQNCNSASTPIEVGLKLIKD 1430
            FDM+D+G MHYFLGIEV QS  G+FISQKKY  EIL++F +++CNS  TP EVGLKL K 
Sbjct: 901  FDMTDMGLMHYFLGIEVVQSSXGVFISQKKYALEILDKFMLKDCNSVITPSEVGLKLSKS 960

Query: 1431 SDEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYMECPREMHLLAAKRILRYLQGT 1610
               ++VDST YKQI GSLMYLT+TRPDIM+ V+LISRYME P E+HLLAAKRI RYL+GT
Sbjct: 961  GAGKRVDSTLYKQIXGSLMYLTSTRPDIMHAVNLISRYMENPTEVHLLAAKRIFRYLKGT 1020

Query: 1611 SDYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFMLGLGAISWSSKKQSIVTLSTT 1790
             D+ + YK+GE S L+ F+DSDYAGDLDDRKSTSG VFML   AI+WSSKKQ I TLSTT
Sbjct: 1021 VDFGILYKRGEKSXLIGFSDSDYAGDLDDRKSTSGAVFMLNSXAITWSSKKQQIXTLSTT 1080

Query: 1791 EAEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNSSTIKLSKNPVLHGRSKHIDVK 1970
            EAEFV A +  CQAIWLR++LE ++ +Q+GPT IYCDN   IKLSKN VLHGRSKHIDV+
Sbjct: 1081 EAEFVXAASSSCQAIWLRRLLEVLYNQQQGPTVIYCDNLXAIKLSKNLVLHGRSKHIDVR 1140

Query: 1971 FYFLRDLSRDGVINLIYCRSEDQIADIFTKSLKLTSFVKLRKLLGLCTLEDAI 2129
            ++FL DL +DGVI+L++C+SEDQI DI TK LK   F+KLR +LG+C+ ++ +
Sbjct: 1141 YHFLCDLCKDGVIDLVFCKSEDQIXDILTKPLKPAVFMKLRSMLGVCSSKEVV 1193


>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  857 bits (2213), Expect = 0.0
 Identities = 430/734 (58%), Positives = 537/734 (73%), Gaps = 27/734 (3%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TIMN VRS+L+   VPK FW EA  WS+HI NRSPT  V+ MTPEEAWS R+P ++YFR+
Sbjct: 605  TIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWSGRKPVVEYFRV 664

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FGCI Y HIPD+KR KLDDK +KC+FLGVS++SKA++LY+P+ KKI+IS+DVVFDE+K W
Sbjct: 665  FGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIVISKDVVFDEDKSW 724

Query: 363  SWN--------------------NDGVQQQIPADFDXXXXXXXXXXXXXXLYP---AATQ 473
             W+                    N  V + I                   L P   A + 
Sbjct: 725  DWDQADVEAKEVTLECGDEDDEKNSEVVEPIAVASPNHVGSDNNVSSSPILAPSSPAPSP 784

Query: 474  NEERPQRARRRPTWMADYEVTGYNQSEDPL--IHFSLFSDCDPTTFEEAVKEPRWQKAMD 647
               +  R RR P WMADYE     + E+ L  +   + ++ DP  F++AVK+  W++AM+
Sbjct: 785  VAAKVTRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADPIQFDDAVKDKIWREAME 844

Query: 648  EEIAAIERNNTWELTKLPKGHKTIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDY 827
             EI +I +NNTWELT LPKG   IGVKWVYKTKL E+GEVDKY+ARLVAKGY Q +G+DY
Sbjct: 845  HEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQCYGIDY 904

Query: 828  REVFAPVARLDTVRLLVALAAQNSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEH 1007
             EVFAPVARLDTVR ++A+++Q +W IFQLDVKSAFLHG L E+V++ QP G++R GEE 
Sbjct: 905  TEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIREGEEE 964

Query: 1008 KVYKLKKALYGLKQAPRAWYSRIDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDD 1187
            KVYKL+KALYGLKQAPRAWYSRI+AYF KE F +CP EHTL+TK    G ILI+ LYVDD
Sbjct: 965  KVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTR-VGNILIVSLYVDD 1023

Query: 1188 LIYTGSDSAMFVKFKKSMMDEFDMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRF 1367
            LI+TGSD AM  +FKKSMM EF+MSDLG M +FLGIEVKQSD GIFI Q++Y +E+L RF
Sbjct: 1024 LIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQRRYAREVLARF 1083

Query: 1368 QMQNCNSASTPIEVGLKLIKDSDEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYM 1547
             M   N+   PI  G KL KD + EKVD T +KQ+VGSLMYLT TRPD+MY V LISR+M
Sbjct: 1084 GMDESNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDLMYGVCLISRFM 1143

Query: 1548 ECPREMHLLAAKRILRYLQGTSDYELFYKKGENSS--LMDFTDSDYAGDLDDRKSTSGYV 1721
              PR  H LAAKRILRYL+GT +  +FY++ +N S  LM FTDSDYAGDL+DR+STSG+V
Sbjct: 1144 SNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRSTSGFV 1203

Query: 1722 FMLGLGAISWSSKKQSIVTLSTTEAEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCD 1901
            F++  GAI W+SKKQ +V LSTTEAE++AA  C CQ +WLRK+LE++  +++  T I CD
Sbjct: 1204 FLMASGAICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATVINCD 1263

Query: 1902 NSSTIKLSKNPVLHGRSKHIDVKFYFLRDLSRDGVINLIYCRSEDQIADIFTKSLKLTSF 2081
            NSSTI+LSK+PVLHG+SKHI+V+F++LRDL    V+ L YC +EDQ+ADIFTK LKL  F
Sbjct: 1264 NSSTIQLSKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLKLEQF 1323

Query: 2082 VKLRKLLGLCTLED 2123
             KLR LLG+  + +
Sbjct: 1324 EKLRALLGMVNMSE 1337


>emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera]
          Length = 1226

 Score =  840 bits (2170), Expect = 0.0
 Identities = 421/738 (57%), Positives = 522/738 (70%), Gaps = 34/738 (4%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TIMNMVRS+L+   +PK+FWPEAVNW++H LNRSPT  VQN TPEEAW + +PS+DYFR+
Sbjct: 499  TIMNMVRSMLSAKKLPKTFWPEAVNWTVHGLNRSPTFAVQNKTPEEAWGKLKPSVDYFRV 558

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FGC+S+ H+PD KR KLDDK   C+ LGVS++SKAY LY+PIS+KIIISR+VVF+E+K W
Sbjct: 559  FGCLSHVHVPDSKRTKLDDKSFSCVLLGVSEESKAYXLYDPISQKIIISRNVVFEEDKBW 618

Query: 363  SW-----------------------NNDGVQQQIPADFDXXXXXXXXXXXXXXLYPAAT- 470
             W                       N +     + AD +                 A T 
Sbjct: 619  DWDKKYEEAIVCDLEWGDDGEEATVNEEKSDSNLDADIEEDTXENNATATATESDAAVTA 678

Query: 471  -----QNEERPQ-----RARRRPTWMADYEVTGYNQSEDPLIHFSLFSDCDPTTFEEAVK 620
                 QN + P      R RR P W +DYE       E+  +  ++F+  DP  FEEAVK
Sbjct: 679  SHLLIQNRDNPSNSNAARNRRPPVWTSDYETGEGISEEEHEVQLAMFAAADPIYFEEAVK 738

Query: 621  EPRWQKAMDEEIAAIERNNTWELTKLPKGHKTIGVKWVYKTKLKENGEVDKYRARLVAKG 800
              +W+  MD E+ AI++N+TWELT LPKG KTIGVKWVYKTK  ENGE            
Sbjct: 739  SEKWRTTMDVEMEAIKKNDTWELTDLPKGGKTIGVKWVYKTKFNENGE------------ 786

Query: 801  YKQEFGVDYREVFAPVARLDTVRLLVALAAQNSWPIFQLDVKSAFLHGNLDEQVFIDQPP 980
                FGVDY EVFAPVAR++T+RL+VALAAQ  W I+QLDVKSAFLHG L++ VF++QP 
Sbjct: 787  ---RFGVDYTEVFAPVARMETIRLVVALAAQRGWSIYQLDVKSAFLHGELNKXVFVEQPC 843

Query: 981  GYVRIGEEHKVYKLKKALYGLKQAPRAWYSRIDAYFSKEGFRKCPYEHTLYTKIEDGGKI 1160
            GYV+   E KVYKLKKALYGLKQAPRAWY+RI+AYF KE F KC YEHTL+ K    GK+
Sbjct: 844  GYVQKXNEQKVYKLKKALYGLKQAPRAWYNRIEAYFMKEVFEKCDYEHTLFIKTNKEGKV 903

Query: 1161 LIICLYVDDLIYTGSDSAMFVKFKKSMMDEFDMSDLGGMHYFLGIEVKQSDVGIFISQKK 1340
            LI+ LYVDDLI+T +D  MF +FK SM  EF+M+DLG M YFLG+EV Q   GIFIS+KK
Sbjct: 904  LIVSLYVDDLIFTXNDELMFAEFKYSMKHEFNMTDLGKMRYFLGLEVLQKSDGIFISKKK 963

Query: 1341 YVQEILNRFQMQNCNSASTPIEVGLKLIKDSDEEKVDSTFYKQIVGSLMYLTATRPDIMY 1520
            Y  E+LNRF M   NS   PI  G KL+KD    KVD T+YKQ+VGSLMYLTAT+P +M+
Sbjct: 964  YALEVLNRFGMDKSNSVFNPIVPGCKLVKDEGGVKVDKTYYKQVVGSLMYLTATQPYLMF 1023

Query: 1521 VVSLISRYMECPREMHLLAAKRILRYLQGTSDYELFYKKGENSSLMDFTDSDYAGDLDDR 1700
            VVS+ISRYME P E+HL AAKR+LRYL+GT D+ +FY+ G +  L+ +TDSDYA DL+DR
Sbjct: 1024 VVSIISRYMENPTELHLQAAKRVLRYLRGTIDFGIFYRXGGDDELVAYTDSDYAVDLEDR 1083

Query: 1701 KSTSGYVFMLGLGAISWSSKKQSIVTLSTTEAEFVAATTCVCQAIWLRKILEEIHFKQEG 1880
            KSTSGYVF+L   AISWSSKKQ +V+LSTTEAEF+AAT+C CQA+WL+++L ++   Q  
Sbjct: 1084 KSTSGYVFLLSSEAISWSSKKQPVVSLSTTEAEFIAATSCACQAVWLKRVLGKLDQNQSR 1143

Query: 1881 PTPIYCDNSSTIKLSKNPVLHGRSKHIDVKFYFLRDLSRDGVINLIYCRSEDQIADIFTK 2060
               I CD+SS IKL KNPV+HGRSKHIDV F+FLRDL++DG   L+YC +++Q+ADI TK
Sbjct: 1144 SCVIQCDSSSAIKLLKNPVMHGRSKHIDVXFHFLRDLTKDGSXELVYCDTQEQLADIMTK 1203

Query: 2061 SLKLTSFVKLRKLLGLCT 2114
             LKL +FVKLR  LG+C+
Sbjct: 1204 PLKLNTFVKLRGQLGVCS 1221


>gb|KYP79141.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 990

 Score =  830 bits (2144), Expect = 0.0
 Identities = 402/705 (57%), Positives = 525/705 (74%), Gaps = 3/705 (0%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TIM+MVR +L    +P+ FW EAV+ +++ILNR PT  V + TPEEAWS R+PS+ + +I
Sbjct: 290  TIMDMVRCMLKAKQMPREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIRHLKI 349

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FGCI+YAH+PD+ R+KLDDKGEKCIF+G S  SKAYKLYNP++KK+IISRDV FDEE  W
Sbjct: 350  FGCIAYAHVPDQLRKKLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMW 409

Query: 363  SWNNDGVQQQI--PADFDXXXXXXXXXXXXXXLYPAATQNEERPQRARRRPTWMADYEVT 536
             W+    ++ +  P +++                P   +   RPQR RR P  + DY V 
Sbjct: 410  DWSFKAQKEPVINPENYEEENGHVNPT-------PDEPETSSRPQRQRRLPARLEDYVVG 462

Query: 537  GYNQ-SEDPLIHFSLFSDCDPTTFEEAVKEPRWQKAMDEEIAAIERNNTWELTKLPKGHK 713
              N  S++ +I+F+LF+DC+P TFEEA     W+KAMDEEI AIE+N TWELT LP   K
Sbjct: 463  NDNDPSDEEIINFALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQTWELTDLPADKK 522

Query: 714  TIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDYREVFAPVARLDTVRLLVALAAQ 893
             IGVKWVYKTK K +GE+D+ +ARLV KGYKQ+ G+DY EVFAPVARLDT+R+L++L+AQ
Sbjct: 523  PIGVKWVYKTKYKSSGEIDRLKARLVVKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQ 582

Query: 894  NSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEHKVYKLKKALYGLKQAPRAWYSR 1073
            N+W I Q+DVKSAFL+G L+E+V+++QP GY   G+E KVY+LKKALYGLKQAPRAWY +
Sbjct: 583  NNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYEVKGKEDKVYRLKKALYGLKQAPRAWYKK 642

Query: 1074 IDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDDLIYTGSDSAMFVKFKKSMMDEF 1253
            ID+YF   GF+KCP+EHTLY K  D   ILI+CLYVDDLI+TG++  MF KF+++M   F
Sbjct: 643  IDSYFVNNGFQKCPFEHTLYIKSVDLDNILIVCLYVDDLIFTGNNPKMFAKFREAMAKCF 702

Query: 1254 DMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRFQMQNCNSASTPIEVGLKLIKDS 1433
            +M+DLG M YFLGIEV Q D GIFISQKK+  +IL +F+M+N    STP+E  LKL  D 
Sbjct: 703  EMTDLGLMSYFLGIEVDQRDDGIFISQKKFAGDILKKFKMENSKPISTPVEEKLKLTSDI 762

Query: 1434 DEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYMECPREMHLLAAKRILRYLQGTS 1613
              +KV+ T YK ++GSL YLTATRPDI+Y V L+SR+ME PR+ H  AAKRILRY++GT 
Sbjct: 763  GGKKVNPTLYKSLIGSLRYLTATRPDIVYGVGLLSRFMEKPRDSHWQAAKRILRYIKGTL 822

Query: 1614 DYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFMLGLGAISWSSKKQSIVTLSTTE 1793
               +FY K  + +L+ +TDSD+AGD++ RKSTSGY F LG G ISWSSKKQ +V LST E
Sbjct: 823  TEGIFYDKNIDVNLVGYTDSDWAGDIETRKSTSGYAFNLGSGTISWSSKKQQVVALSTAE 882

Query: 1794 AEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNSSTIKLSKNPVLHGRSKHIDVKF 1973
            AE++AA +C  QA+WLR++LE ++ KQ  PT I+CDN S I L KNPV HGRSKHID++F
Sbjct: 883  AEYIAAASCATQAVWLRRMLEVMYQKQNTPTMIFCDNKSAIALCKNPVFHGRSKHIDIRF 942

Query: 1974 YFLRDLSRDGVINLIYCRSEDQIADIFTKSLKLTSFVKLRKLLGL 2108
            + +R+L  +  + + YC +E+Q+ADIFTK LK+  F KL+++LG+
Sbjct: 943  HKIRELVAEKEVTIEYCSTEEQVADIFTKPLKVELFCKLKRMLGM 987


>gb|KYP74877.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1232

 Score =  838 bits (2165), Expect = 0.0
 Identities = 408/730 (55%), Positives = 531/730 (72%), Gaps = 28/730 (3%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TIMNMVRS+L    VPK FWPEA  W +HILNRSPT VVQ+ TPEEAWS  +PS+ YFR+
Sbjct: 504  TIMNMVRSMLIGRQVPKIFWPEATKWCVHILNRSPTAVVQDQTPEEAWSGVKPSVGYFRV 563

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FGC+++ H  D++R KLDDK ++C+  GVSD+SKAY+L++P++KKIIIS+DV+F+E K W
Sbjct: 564  FGCLAHVHTLDQQRIKLDDKSKQCVLFGVSDESKAYRLFDPVNKKIIISKDVIFEEHKSW 623

Query: 363  SWNNDGVQQQIPADFDXXXXXXXXXXXXXXLYPAATQNEE-------------------- 482
            +W  +  + Q+    +               +   + NEE                    
Sbjct: 624  NWEQNKAENQL----EIVEWEEHEGNSTEIQFEDKSNNEEQQGTESQSAGTNVRNKSHTQ 679

Query: 483  --------RPQRARRRPTWMADYEVTGYNQSEDPLIHFSLFSDCDPTTFEEAVKEPRWQK 638
                    R +R RR P WM DYE  G   S        L ++ DP T EEAVK  +W+ 
Sbjct: 680  ILEIPTKGRARRHRREPVWMTDYE-KGEGLSYINNTSAMLVTETDPVTVEEAVKSKKWRD 738

Query: 639  AMDEEIAAIERNNTWELTKLPKGHKTIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFG 818
            AM +E+ AIERN TWELT +PKG K IGVKWV+KTK KENGE+DK++ARLVAKGY Q +G
Sbjct: 739  AMVKEMEAIERNQTWELTDVPKGVKPIGVKWVFKTKHKENGEIDKFKARLVAKGYAQHYG 798

Query: 819  VDYREVFAPVARLDTVRLLVALAAQNSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIG 998
            VDY EVFAPVA++DT+R+++++AAQN W IFQLDVKSAFLHG L E++++ QP  +++ G
Sbjct: 799  VDYTEVFAPVAKVDTIRIILSMAAQNGWIIFQLDVKSAFLHGELKEEIYVQQPAEFIKKG 858

Query: 999  EEHKVYKLKKALYGLKQAPRAWYSRIDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLY 1178
            +E KVYKL+KALYGLKQAPRAWY+RI+AYF + GF +C  EHTL+TK  +GGKILI+ LY
Sbjct: 859  KEEKVYKLRKALYGLKQAPRAWYNRIEAYFLQNGFERCFCEHTLFTKSAEGGKILIVSLY 918

Query: 1179 VDDLIYTGSDSAMFVKFKKSMMDEFDMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEIL 1358
            VDDLIYTG+D +M   F+  MM +FDM+DLG M YFLGIE+ Q+  GIF+ Q+KY  E+L
Sbjct: 919  VDDLIYTGNDGSMCNDFRNIMMSKFDMTDLGKMRYFLGIEILQNAHGIFMCQRKYAYEVL 978

Query: 1359 NRFQMQNCNSASTPIEVGLKLIKDSDEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLIS 1538
            +RF M  CN+   P+    KL ++    KVD+T +KQ+VGSLMYLTATRPD+MY VSLIS
Sbjct: 979  SRFGMMECNAVKNPLVPRTKLSRNDAGTKVDATLFKQVVGSLMYLTATRPDLMYGVSLIS 1038

Query: 1539 RYMECPREMHLLAAKRILRYLQGTSDYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGY 1718
            R+M  P E H  AAKRILRYL+GT+++ + YKK E+++L+ +TDSD+AGD+DDRKSTSG+
Sbjct: 1039 RFMANPTETHWSAAKRILRYLKGTTEFGILYKKEEDTTLVAYTDSDFAGDIDDRKSTSGF 1098

Query: 1719 VFMLGLGAISWSSKKQSIVTLSTTEAEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYC 1898
            VF LG GA+SWSSKKQ IVTLSTTE+E++AA +C CQ IW+++ILE I FK+     + C
Sbjct: 1099 VFSLGTGAVSWSSKKQPIVTLSTTESEYIAAASCACQCIWIKRILETIGFKEHKHILVLC 1158

Query: 1899 DNSSTIKLSKNPVLHGRSKHIDVKFYFLRDLSRDGVINLIYCRSEDQIADIFTKSLKLTS 2078
            D++S IKLS+NPV HGRSKHIDV+F+FLRD+ R+G I L YC + +Q+ADI TK LKL  
Sbjct: 1159 DSNSAIKLSENPVFHGRSKHIDVRFHFLRDIVREGKIKLSYCSTYNQVADIMTKPLKLEQ 1218

Query: 2079 FVKLRKLLGL 2108
            FVK+R +LG+
Sbjct: 1219 FVKIRSMLGM 1228


>gb|KYP71150.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1228

 Score =  830 bits (2144), Expect = 0.0
 Identities = 401/705 (56%), Positives = 527/705 (74%), Gaps = 3/705 (0%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TIM+MVR +L    +P+ FW EAV+ +++ILNR PT  V + TPEEAWS R+PS+ + +I
Sbjct: 528  TIMDMVRCMLKAKQMPREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIRHLKI 587

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FGCI+YAH+PD+ R+KLDDKGEKCIF+G S  SKAYKLYNP++KK+IISRDV FDEE  W
Sbjct: 588  FGCIAYAHVPDQLRKKLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMW 647

Query: 363  SWNNDGVQQQI--PADFDXXXXXXXXXXXXXXLYPAATQNEERPQRARRRPTWMADYEVT 536
             W+    ++ +  P +++                P   +   RPQR RR P  + DY V 
Sbjct: 648  DWSFKAQKEPVINPENYEEENGHVNPT-------PDEPETSSRPQRQRRLPARLEDYVVG 700

Query: 537  GYNQ-SEDPLIHFSLFSDCDPTTFEEAVKEPRWQKAMDEEIAAIERNNTWELTKLPKGHK 713
              N  S++ +I+F+LF+DC+P TFEEA     W+KAMDEEI AIE+N TWELT LP   K
Sbjct: 701  NDNDPSDEEIINFALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQTWELTDLPADKK 760

Query: 714  TIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDYREVFAPVARLDTVRLLVALAAQ 893
             IGVKWVYKTK K +GE+D+ +ARLV KGYKQ+ G+DY EVFAPVARLDT+R+L++L+AQ
Sbjct: 761  PIGVKWVYKTKYKSSGEIDRLKARLVVKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQ 820

Query: 894  NSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEHKVYKLKKALYGLKQAPRAWYSR 1073
            N+W I Q+DVKSAFL+G L+E+V+++QP GY   G+E KVY+LKKALYGLKQAPRAWY +
Sbjct: 821  NNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYEVKGKEDKVYRLKKALYGLKQAPRAWYKK 880

Query: 1074 IDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDDLIYTGSDSAMFVKFKKSMMDEF 1253
            ID+YF   GF++CP+EHTLY K  D   ILI+CLYVDDLI+TG++  MFV+F+++M+  F
Sbjct: 881  IDSYFVDNGFQRCPFEHTLYIKSVDPDNILIVCLYVDDLIFTGNNPKMFVEFREAMVKCF 940

Query: 1254 DMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRFQMQNCNSASTPIEVGLKLIKDS 1433
            +M+DLG M YFLGIEV Q D GIFISQKK+  +IL +F+M+N    STP+E  LKL  D 
Sbjct: 941  EMTDLGLMSYFLGIEVDQRDDGIFISQKKFAGDILKKFKMENSKPISTPVEEKLKLTSDI 1000

Query: 1434 DEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYMECPREMHLLAAKRILRYLQGTS 1613
              +KV+ T YK ++GSL YLTATRPDI+Y V L+SR+ME PR+ H  AAKRILRY++GT 
Sbjct: 1001 GGKKVNPTLYKSLIGSLRYLTATRPDIVYGVGLLSRFMEKPRDSHWQAAKRILRYIKGTL 1060

Query: 1614 DYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFMLGLGAISWSSKKQSIVTLSTTE 1793
               +FY K  + +L+ +TDSD+AGD++ RKSTSGY F LG G ISWSSKKQ +V LST E
Sbjct: 1061 TEGIFYDKNIDVNLVGYTDSDWAGDIETRKSTSGYAFNLGSGTISWSSKKQQVVALSTAE 1120

Query: 1794 AEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNSSTIKLSKNPVLHGRSKHIDVKF 1973
            AE++AA +C  QA+WLR++LE ++ KQ  PT I+CDN S I L KNPV HGRSKHID++F
Sbjct: 1121 AEYIAAASCATQAVWLRRMLEVMYQKQNTPTMIFCDNKSAIALCKNPVFHGRSKHIDIRF 1180

Query: 1974 YFLRDLSRDGVINLIYCRSEDQIADIFTKSLKLTSFVKLRKLLGL 2108
            + +R+L  +  + + YC +E+Q+ADIFTK LK+  F KL+++LG+
Sbjct: 1181 HKIRELVAEKEVTIEYCSTEEQVADIFTKPLKVELFCKLKRMLGM 1225


>gb|KYP77007.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1228

 Score =  830 bits (2143), Expect = 0.0
 Identities = 401/703 (57%), Positives = 525/703 (74%), Gaps = 1/703 (0%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TIM+MVR +L    +P+ FW EAV+ +++ILNR PT  V + TPEEAWS R+PS+ + RI
Sbjct: 528  TIMDMVRCMLKAKQMPREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIRHLRI 587

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FGCI+YAH+PD+ R+KLDDKGEKCIF+G S  SKAYKLYNP++KK+IISRDV FDEE  W
Sbjct: 588  FGCIAYAHVPDQLRKKLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMW 647

Query: 363  SWNNDGVQQQIPADFDXXXXXXXXXXXXXXLYPAATQNEERPQRARRRPTWMADYEVTGY 542
             W+     Q++PA                   P   +   RPQR RR P  + DY V   
Sbjct: 648  DWSFKA--QKVPA---VNSENYEEENGHVDTTPDEPETSSRPQRQRRLPARLEDYVVGND 702

Query: 543  NQ-SEDPLIHFSLFSDCDPTTFEEAVKEPRWQKAMDEEIAAIERNNTWELTKLPKGHKTI 719
            N  S++ +I+F+LF+DC+P TFEEA     W+KAMDEEI AIE+N TWELT LP   + I
Sbjct: 703  NDPSDEEIINFALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQTWELTDLPANKRQI 762

Query: 720  GVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDYREVFAPVARLDTVRLLVALAAQNS 899
            GVKWVYKTK K NGE+D+++ARLVAKGYKQ+ G+DY EVFAPVARLDT+R+L++++AQN+
Sbjct: 763  GVKWVYKTKYKSNGEIDRFKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISISAQNN 822

Query: 900  WPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEHKVYKLKKALYGLKQAPRAWYSRID 1079
            W I Q+DVKSAFL+G L+E+V+++QP GY   G+E KVY+LKKALYGLKQAPRAWY +ID
Sbjct: 823  WKIHQMDVKSAFLNGTLEEEVYVEQPAGYKIKGKEDKVYRLKKALYGLKQAPRAWYKKID 882

Query: 1080 AYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDDLIYTGSDSAMFVKFKKSMMDEFDM 1259
            +YF   GF++CP+EHTLY K  D   ILI+CLYVDDLI+TG++  MF +F+++M+  F+M
Sbjct: 883  SYFVDNGFQRCPFEHTLYIKSVDPDNILIVCLYVDDLIFTGNNPKMFAEFREAMVKSFEM 942

Query: 1260 SDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRFQMQNCNSASTPIEVGLKLIKDSDE 1439
            +DLG M YFLGIEV Q D GIFISQKK+  +IL +F+M+N    STP+E  LKL  + + 
Sbjct: 943  TDLGLMSYFLGIEVDQRDDGIFISQKKFAGDILKKFKMENSKPISTPVEEKLKLTSNIEG 1002

Query: 1440 EKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYMECPREMHLLAAKRILRYLQGTSDY 1619
            +K++ T YK ++GSL YLTATRPDI+Y V L+SR+ME PR+ H  AAKRILRY++GT   
Sbjct: 1003 KKINPTLYKSLIGSLRYLTATRPDIVYGVGLLSRFMEKPRDSHWQAAKRILRYIKGTLTE 1062

Query: 1620 ELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFMLGLGAISWSSKKQSIVTLSTTEAE 1799
             +FY K  + +L+ +TDSD+AGD++ RKSTSGY F LG G ISWSSKKQ +V LST EAE
Sbjct: 1063 GIFYDKDFDVNLVGYTDSDWAGDIETRKSTSGYAFNLGSGTISWSSKKQQVVALSTAEAE 1122

Query: 1800 FVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNSSTIKLSKNPVLHGRSKHIDVKFYF 1979
            ++AA +C  QA+WLR++LE +H KQ+ PT I+CDN S I + KN V H RSKHID++F+ 
Sbjct: 1123 YIAAASCATQAVWLRRMLEVMHQKQDNPTVIFCDNKSAIAICKNLVFHERSKHIDIRFHK 1182

Query: 1980 LRDLSRDGVINLIYCRSEDQIADIFTKSLKLTSFVKLRKLLGL 2108
            +R+L  +  + + YC +E+QIADIFTK LK   F KL+K+LG+
Sbjct: 1183 IRELVTEKEVLINYCHTEEQIADIFTKPLKAELFYKLKKMLGM 1225


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score =  813 bits (2101), Expect = 0.0
 Identities = 399/685 (58%), Positives = 491/685 (71%), Gaps = 26/685 (3%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TIMNMVRS+++   +PK FWPEAVNW++H+LNRSPTL VQN TP EAWS  +PS+++FR+
Sbjct: 582  TIMNMVRSMISEKKIPKPFWPEAVNWTVHVLNRSPTLAVQNKTPXEAWSGVKPSVEHFRV 641

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FGCIS+ H+PD KR KLDDK   C+ LGVS+                   DVVF+E K W
Sbjct: 642  FGCISHVHVPDNKRTKLDDKSLSCVLLGVSEG------------------DVVFEEHKNW 683

Query: 363  SW--------------------------NNDGVQQQIPADFDXXXXXXXXXXXXXXLYPA 464
             W                          N +G +  + AD +                P+
Sbjct: 684  DWDKTYEKSIVCDLEWGDLEEEATMFDENEEGTESDLEADIEAEEDNFSSDSLTEDSSPS 743

Query: 465  ATQNEERPQRARRRPTWMADYEVTGYNQSEDPLIHFSLFSDCDPTTFEEAVKEPRWQKAM 644
            +T      +R RR P WM DY++      ED   H ++F+  DP  FE+AVK  +W+KAM
Sbjct: 744  STA-----ERIRRPPAWMRDYDIGEGLSEEDNEAHLAMFAAADPIHFEDAVKSEKWKKAM 798

Query: 645  DEEIAAIERNNTWELTKLPKGHKTIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVD 824
            D E+AAI +N TWELT+LP+G K IGVKW+YKTK  ENGEVDKY+ARLVAKGY Q+ GVD
Sbjct: 799  DLELAAINKNGTWELTELPEGGKKIGVKWIYKTKFNENGEVDKYKARLVAKGYTQQHGVD 858

Query: 825  YREVFAPVARLDTVRLLVALAAQNSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEE 1004
            Y EVFAPVAR++T+RL+VALAAQ  W I+QLDVKSAFLHG L+E+VF++QP GYV+ G E
Sbjct: 859  YTEVFAPVARMETIRLVVALAAQRKWTIYQLDVKSAFLHGELNEEVFVEQPCGYVQKGHE 918

Query: 1005 HKVYKLKKALYGLKQAPRAWYSRIDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVD 1184
             KVYKLKKALYGLKQAP AWYS I+AYF KEGF KC YEHTL+ K    GK+LI+ LYVD
Sbjct: 919  QKVYKLKKALYGLKQAPXAWYSXIEAYFMKEGFEKCDYEHTLFIKTRKEGKVLIVSLYVD 978

Query: 1185 DLIYTGSDSAMFVKFKKSMMDEFDMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNR 1364
            DLI+TG+D  MF  FK+SM DEFDM+DLG M YFLG+EV Q   GIFISQKKY  E+L R
Sbjct: 979  DLIFTGNDELMFTDFKRSMKDEFDMTDLGKMRYFLGLEVLQRSDGIFISQKKYALEVLQR 1038

Query: 1365 FQMQNCNSASTPIEVGLKLIKDSDEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRY 1544
            F M   NS   PI  G KL+KD    KVD T+YKQ+VGSLMYL ATRPD+M+VVSLISRY
Sbjct: 1039 FGMDKSNSVHNPIVPGFKLMKDEGGVKVDKTYYKQVVGSLMYLXATRPDMMFVVSLISRY 1098

Query: 1545 MECPREMHLLAAKRILRYLQGTSDYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVF 1724
            ME P E+HL AAKR+LRYLQGT+++ +FY+KG +  L+ +T+SD+AGDLD+RKSTSGYVF
Sbjct: 1099 MENPTELHLQAAKRVLRYLQGTTEFGIFYRKGGDDELVTYTBSDHAGDLDERKSTSGYVF 1158

Query: 1725 MLGLGAISWSSKKQSIVTLSTTEAEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDN 1904
            +L  GAISWSSKKQ IV+LS+TEAEF+AA +C CQA+WL+++L ++   Q  PT I+CD+
Sbjct: 1159 LLSSGAISWSSKKQPIVSLSSTEAEFIAAASCACQAVWLKRVLGKLGQNQGKPTIIHCDS 1218

Query: 1905 SSTIKLSKNPVLHGRSKHIDVKFYF 1979
            SS IKLSKNPV+HGRSKHIDV+  F
Sbjct: 1219 SSAIKLSKNPVMHGRSKHIDVRLPF 1243


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  805 bits (2078), Expect = 0.0
 Identities = 400/709 (56%), Positives = 516/709 (72%), Gaps = 7/709 (0%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TIMN+VRS+L+   VPKS+WPEAV W  H+LNRSPTLVVQ++TPEEAWS  +P++DYFR+
Sbjct: 472  TIMNLVRSVLSEKRVPKSYWPEAVKWITHVLNRSPTLVVQDVTPEEAWSGIKPNVDYFRV 531

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FGCI++AHIPD KR K DDK  KC+FLG +             + +++  D   +E+   
Sbjct: 532  FGCIAHAHIPDAKRTKFDDKSCKCVFLGRTQVGIGEGSIEEEKQDVLVWGDSEENEQAQS 591

Query: 363  SWNNDGVQQQIPADFDXXXXXXXXXXXXXXLYPAATQNEERPQ-----RARRRPTWMADY 527
                DGV  Q                    +  +   + + PQ     R RR+P WM  Y
Sbjct: 592  EEETDGVVAQDDGVVPNQSSGSSSSSNNGSIPSSCQGSPQSPQIVDEERNRRQPIWMQGY 651

Query: 528  -EVTGYNQSEDPLIHFSLFSDCD-PTTFEEAVKEPRWQKAMDEEIAAIERNNTWELTKLP 701
                G ++ E  L + ++F+  D P++FEEAV   RW++AM  EI AIE N+TW+LT LP
Sbjct: 652  VSGEGLSEEEQELHNLAVFTPSDDPSSFEEAVVHSRWREAMRAEIEAIETNDTWQLTSLP 711

Query: 702  KGHKTIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDYREVFAPVARLDTVRLLVA 881
            KG K IGVKWV+KTK  E+G+VDK +ARLVAKGY Q+FG+DY EV+APVAR DT+RL+VA
Sbjct: 712  KGVKKIGVKWVFKTKYNEHGKVDKCKARLVAKGYAQQFGIDYTEVYAPVARWDTIRLIVA 771

Query: 882  LAAQNSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEHKVYKLKKALYGLKQAPRA 1061
            LAAQ +W IFQLDVKSAFLHG L+E V+I+QP G+ + GEE KVYKLKKALYGLKQAPRA
Sbjct: 772  LAAQKNWTIFQLDVKSAFLHGELNEDVYIEQPQGFEQKGEEEKVYKLKKALYGLKQAPRA 831

Query: 1062 WYSRIDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDDLIYTGSDSAMFVKFKKSM 1241
            WYSRI+ YF KEGF +C YEHTL+ KIE  GK+LI+ LYVDD I+TG+D +M  KFK SM
Sbjct: 832  WYSRIEGYFVKEGFERCSYEHTLFVKIEGEGKMLIVSLYVDDQIFTGNDMSMIEKFKSSM 891

Query: 1242 MDEFDMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRFQMQNCNSASTPIEVGLKL 1421
            M EF+M+DLG M YFLG+E++QS  GI + Q KY +E++ RF M   N    PI  G KL
Sbjct: 892  MHEFEMTDLGEMKYFLGVEIRQSAEGIHLCQSKYAREVIERFGMGKSNPVRNPIVPGSKL 951

Query: 1422 IKDSDEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYMECPREMHLLAAKRILRYL 1601
              ++    VD T +KQ+VGSLMYLTATRPD++YVV LISR+M  PRE HL AAKR+LRYL
Sbjct: 952  SMEAGGAVVDGTLFKQLVGSLMYLTATRPDLIYVVCLISRFMAHPREAHLSAAKRVLRYL 1011

Query: 1602 QGTSDYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFMLGLGAISWSSKKQSIVTL 1781
            +GT++  +FY++G +  L+ +TDSDYAGD+D ++STSG+VFML  GA+SWSS+KQ +VTL
Sbjct: 1012 KGTTELGVFYRRGVDDELVGYTDSDYAGDMDGKRSTSGFVFMLSGGAVSWSSRKQHVVTL 1071

Query: 1782 STTEAEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNSSTIKLSKNPVLHGRSKHI 1961
            STTEAE+VAA  C CQ++W+R++L ++ + Q     ++CDNSSTIKLSKNPV HGRSKHI
Sbjct: 1072 STTEAEYVAAAGCACQSVWMRRVLNKLGYSQCKCVTMFCDNSSTIKLSKNPVFHGRSKHI 1131

Query: 1962 DVKFYFLRDLSRDGVINLIYCRSEDQIADIFTKSLKLTSFVKLRKLLGL 2108
            DV+F+FLRDL++DGV+ L +  S++QIADI TK LK+  F KLR+LLG+
Sbjct: 1132 DVRFHFLRDLTKDGVVELKFYGSKEQIADILTKPLKMERFEKLRELLGV 1180


>gb|AIC77183.1| polyprotein [Gossypium barbadense]
          Length = 1369

 Score =  800 bits (2067), Expect = 0.0
 Identities = 381/708 (53%), Positives = 514/708 (72%), Gaps = 6/708 (0%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TI++M RS++    +P++FW EAV  ++++LN+ PT  V++ TPEEAWS  +P + + +I
Sbjct: 654  TILDMARSMIKGKHLPRTFWAEAVECAVYLLNQCPTKSVRHKTPEEAWSGHKPRVGHLKI 713

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FGCI+YAH+P+++R+KLDD+GEKCIF+G   +SKAY+LYNP++KK+IISRDV FDE  YW
Sbjct: 714  FGCIAYAHVPEQQRKKLDDRGEKCIFIGYDKRSKAYRLYNPLTKKLIISRDVEFDEADYW 773

Query: 363  SWNNDG--VQQQIPADFDXXXXXXXXXXXXXXLYPAATQNEERPQRARRRPTWMAD---- 524
             W+ +   V+     + D                P++  +          PT        
Sbjct: 774  RWSEEEKKVEGLFFNEDDNNQEEQGDDQSPGTTAPSSPTSSSGSSSLDEAPTRTRSLNDI 833

Query: 525  YEVTGYNQSEDPLIHFSLFSDCDPTTFEEAVKEPRWQKAMDEEIAAIERNNTWELTKLPK 704
            Y  T   +++     F L ++CDP T+EEA++  +W+KAMDEEIAAI RN+TWELT LP+
Sbjct: 834  YNSTEPVETQFDYSLFCLMTECDPVTYEEAIENNKWKKAMDEEIAAIRRNDTWELTSLPE 893

Query: 705  GHKTIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDYREVFAPVARLDTVRLLVAL 884
            GH  IGVKWVYKTK  + G+V+KY+ARLVAKGYKQ  GVDY E+FAPVAR+DT+RLL+A+
Sbjct: 894  GHSPIGVKWVYKTKTNKEGKVEKYKARLVAKGYKQRQGVDYDEIFAPVARIDTIRLLIAV 953

Query: 885  AAQNSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEHKVYKLKKALYGLKQAPRAW 1064
            AAQ  W I+Q+DVKSAFL+G L+E+V+I+QPPGY   G+E KVY+LKK+LYGLKQAPRAW
Sbjct: 954  AAQYKWKIYQMDVKSAFLNGYLEEEVYIEQPPGYSIQGKEDKVYRLKKSLYGLKQAPRAW 1013

Query: 1065 YSRIDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDDLIYTGSDSAMFVKFKKSMM 1244
             +RID YF + GF K P+EHTLYTK    G I+I+CLYVDD+I+TG++  M   FKK+M 
Sbjct: 1014 NTRIDEYFRRNGFIKSPHEHTLYTKKNGYGDIMIVCLYVDDMIFTGNNPGMSDDFKKAMT 1073

Query: 1245 DEFDMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRFQMQNCNSASTPIEVGLKLI 1424
             EF+M+D+G M YFLG+EVKQ   GIF+SQKKY ++ILN+F+M++C    TP + G+KL 
Sbjct: 1074 KEFEMTDIGEMSYFLGVEVKQMQDGIFVSQKKYAEQILNKFKMKDCKPVVTPADPGMKLS 1133

Query: 1425 KDSDEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYMECPREMHLLAAKRILRYLQ 1604
             DS  E ++ T +K +VGSL YLT TRPDI Y V L+SR+ME P++ HL+AAKRILRY++
Sbjct: 1134 VDSTRESINPTLFKSLVGSLRYLTITRPDITYAVGLVSRFMEKPKQDHLIAAKRILRYIK 1193

Query: 1605 GTSDYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFMLGLGAISWSSKKQSIVTLS 1784
            GT ++ LFY   ++S L+ ++DSDY GDLDDRKSTSGY F +     SWSSKKQ  + LS
Sbjct: 1194 GTMNHGLFYTHSQDSKLVGYSDSDYGGDLDDRKSTSGYAFHISSAVFSWSSKKQQTIALS 1253

Query: 1785 TTEAEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNSSTIKLSKNPVLHGRSKHID 1964
            T EAE++AA TC CQA+WL+ IL EI    EGP  IY DN S I L+KNPV H RSKHID
Sbjct: 1254 TCEAEYMAAATCTCQAMWLKNILGEIGVSNEGPITIYVDNKSAISLAKNPVSHSRSKHID 1313

Query: 1965 VKFYFLRDLSRDGVINLIYCRSEDQIADIFTKSLKLTSFVKLRKLLGL 2108
             K++F+R+  ++  + L++CR+EDQ+ADIFTK LK+ +F K ++ LG+
Sbjct: 1314 TKYHFIREQVKNKNVELVHCRTEDQLADIFTKPLKVETFNKFKEKLGM 1361


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
          Length = 1334

 Score =  783 bits (2021), Expect = 0.0
 Identities = 390/730 (53%), Positives = 511/730 (70%), Gaps = 23/730 (3%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            ++MNM R +L    VP+ FWPEAV ++++ILNRSP+  + ++TPEE WS  +PS+++ RI
Sbjct: 606  SVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRI 665

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FG ++YA +P +KR KLD+K  KC+  GVS +SKAY+LY+P + KI+ISRDV FDEE+ W
Sbjct: 666  FGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFDEERGW 725

Query: 363  SWNNDGVQQQIP---ADFDXXXXXXXXXXXXXXLYPAATQNEERPQ-------------- 491
             W +  +++++    +D +                   T+ EE                 
Sbjct: 726  EWEDKSLEEELVWDNSDHEPAGEEGPEINHNGQQDQEETEEEEETVAETVHQNLPAVGTG 785

Query: 492  --RARRRPTWMADYEVTG----YNQSEDPLIHFSLFSDCDPTTFEEAVKEPRWQKAMDEE 653
              R R++P WM DY V        Q E+  +        DP  FEEA +   W+KAM+ E
Sbjct: 786  GVRQRQQPVWMKDYVVGNARVLITQDEEDEVLALFIGPDDPVCFEEAAQLEVWRKAMEAE 845

Query: 654  IAAIERNNTWELTKLPKGHKTIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDYRE 833
            I +IE NNTWEL +LP+  K IG+KW++KTK  E GEVDK++ARLVAKGY Q +GVD+ E
Sbjct: 846  ITSIEENNTWELVELPEEAKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYE 905

Query: 834  VFAPVARLDTVRLLVALAAQNSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEHKV 1013
            VFAPVA+ DT+RL++ LAA+  W +FQLDVKSAFLHG+L E VF++QP G+    E  KV
Sbjct: 906  VFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKV 965

Query: 1014 YKLKKALYGLKQAPRAWYSRIDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDDLI 1193
            YKLKKALYGLKQAPRAWYSRI+ +F KEGF KC  EHTL+ K ++    L++ +YVDDLI
Sbjct: 966  YKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYCEHTLFVK-KERSDFLVVSVYVDDLI 1024

Query: 1194 YTGSDSAMFVKFKKSMMDEFDMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRFQM 1373
            YTGS   M   FK SMM+EF M+DLG M YFLG+EV Q + GIFI+Q+KY  EI+ ++ M
Sbjct: 1025 YTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDERGIFINQRKYAAEIIKKYGM 1084

Query: 1374 QNCNSASTPIEVGLKLIKDSDEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYMEC 1553
            + CNS   PI  G KL K    + VD T +KQ++GSL YLT TRPD+++ V+L+SRYME 
Sbjct: 1085 EGCNSVKNPIVPGQKLTKAGAGDAVDPTEFKQLIGSLRYLTTTRPDLIFSVNLVSRYMES 1144

Query: 1554 PREMHLLAAKRILRYLQGTSDYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFMLG 1733
            P E HLLA KRILRY+QGT D  + Y++G  + L+ F DSDYAGD+DDRKSTSGYVFMLG
Sbjct: 1145 PNEQHLLAVKRILRYVQGTLDLGIQYERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLG 1204

Query: 1734 LGAISWSSKKQSIVTLSTTEAEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNSST 1913
             GAI+W+SKKQ IVTLSTTEAEFV+A+   CQA+WLR +LEEI  +QEG T ++CDNSST
Sbjct: 1205 GGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSST 1264

Query: 1914 IKLSKNPVLHGRSKHIDVKFYFLRDLSRDGVINLIYCRSEDQIADIFTKSLKLTSFVKLR 2093
            IKLSKNPVLHGRSKHI V+++FLR+L ++G I L YC + DQ+ADI TK++K   F +LR
Sbjct: 1265 IKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEELR 1324

Query: 2094 KLLGLCTLED 2123
              +G+   E+
Sbjct: 1325 GRMGVRRREE 1334


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
            gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1334

 Score =  783 bits (2021), Expect = 0.0
 Identities = 390/730 (53%), Positives = 511/730 (70%), Gaps = 23/730 (3%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            ++MNM R +L    VP+ FWPEAV ++++ILNRSP+  + ++TPEE WS  +PS+++ RI
Sbjct: 606  SVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRI 665

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FG ++YA +P +KR KLD+K  KC+  GVS +SKAY+LY+P + KI+ISRDV FDEE+ W
Sbjct: 666  FGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFDEERGW 725

Query: 363  SWNNDGVQQQIP---ADFDXXXXXXXXXXXXXXLYPAATQNEERPQ-------------- 491
             W +  +++++    +D +                   T+ EE                 
Sbjct: 726  EWEDKSLEEELVWDNSDHEPAGEEGPEINHNGQQDQEETEEEEETVAETVHQNLPAVGTG 785

Query: 492  --RARRRPTWMADYEVTG----YNQSEDPLIHFSLFSDCDPTTFEEAVKEPRWQKAMDEE 653
              R R++P WM DY V        Q E+  +        DP  FEEA +   W+KAM+ E
Sbjct: 786  GVRQRQQPVWMKDYVVGNARVLITQDEEDEVLALFIGPGDPVCFEEAAQLEVWRKAMEAE 845

Query: 654  IAAIERNNTWELTKLPKGHKTIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDYRE 833
            I +IE NNTWEL +LP+  K IG+KW++KTK  E GEVDK++ARLVAKGY Q +GVD+ E
Sbjct: 846  ITSIEENNTWELVELPEEAKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYE 905

Query: 834  VFAPVARLDTVRLLVALAAQNSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEHKV 1013
            VFAPVA+ DT+RL++ LAA+  W +FQLDVKSAFLHG+L E VF++QP G+    E  KV
Sbjct: 906  VFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKV 965

Query: 1014 YKLKKALYGLKQAPRAWYSRIDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDDLI 1193
            YKLKKALYGLKQAPRAWYSRI+ +F KEGF KC  EHTL+ K ++    L++ +YVDDLI
Sbjct: 966  YKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYCEHTLFVK-KERSDFLVVSVYVDDLI 1024

Query: 1194 YTGSDSAMFVKFKKSMMDEFDMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRFQM 1373
            YTGS   M   FK SMM+EF M+DLG M YFLG+EV Q + GIFI+Q+KY  EI+ ++ M
Sbjct: 1025 YTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDERGIFINQRKYAAEIIKKYGM 1084

Query: 1374 QNCNSASTPIEVGLKLIKDSDEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYMEC 1553
            + CNS   PI  G KL K    + VD T +KQ++GSL YLT TRPD+++ V+L+SRYME 
Sbjct: 1085 EGCNSVKNPIVPGQKLTKAGAGDAVDPTEFKQLIGSLRYLTTTRPDLIFSVNLVSRYMES 1144

Query: 1554 PREMHLLAAKRILRYLQGTSDYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFMLG 1733
            P E HLLA KRILRY+QGT D  + Y++G  + L+ F DSDYAGD+DDRKSTSGYVFMLG
Sbjct: 1145 PNEQHLLAVKRILRYVQGTLDLGIQYERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLG 1204

Query: 1734 LGAISWSSKKQSIVTLSTTEAEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNSST 1913
             GAI+W+SKKQ IVTLSTTEAEFV+A+   CQA+WLR +LEEI  +QEG T ++CDNSST
Sbjct: 1205 GGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSST 1264

Query: 1914 IKLSKNPVLHGRSKHIDVKFYFLRDLSRDGVINLIYCRSEDQIADIFTKSLKLTSFVKLR 2093
            IKLSKNPVLHGRSKHI V+++FLR+L ++G I L YC + DQ+ADI TK++K   F +LR
Sbjct: 1265 IKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEELR 1324

Query: 2094 KLLGLCTLED 2123
              +G+   E+
Sbjct: 1325 GRMGVRRREE 1334


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  773 bits (1995), Expect = 0.0
 Identities = 379/708 (53%), Positives = 502/708 (70%), Gaps = 6/708 (0%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TI+ M RS+L    +PK  W EAV  ++++LNRSPT  V   TP+EAWS R+  + + R+
Sbjct: 637  TILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRV 696

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FG I++AH+PDEKR KLDDK EK IF+G  + SK YKLYNP +KK IISR++VFDEE  W
Sbjct: 697  FGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEW 756

Query: 363  SWNNDGVQQQIPADFDXXXXXXXXXXXXXX------LYPAATQNEERPQRARRRPTWMAD 524
             WN++         F+                      P ++Q EE    + R P + + 
Sbjct: 757  DWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEE--SSSERTPRFRSI 814

Query: 525  YEVTGYNQSEDPLIHFSLFSDCDPTTFEEAVKEPRWQKAMDEEIAAIERNNTWELTKLPK 704
             E+    ++++ L  F LF++C+P  F+EA+++  W+ AMDEEI +I++N+TWELT LP 
Sbjct: 815  QELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPN 874

Query: 705  GHKTIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDYREVFAPVARLDTVRLLVAL 884
            GHKTIGVKWVYK K    GEV++Y+ARLVAKGY Q  G+DY EVFAPVARL+TVRL+++L
Sbjct: 875  GHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISL 934

Query: 885  AAQNSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEHKVYKLKKALYGLKQAPRAW 1064
            AAQN W I Q+DVKSAFL+G+L+E+V+I+QP GY+  GEE KV +LKKALYGLKQAPRAW
Sbjct: 935  AAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAW 994

Query: 1065 YSRIDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDDLIYTGSDSAMFVKFKKSMM 1244
             +RID YF ++ F KCPYEH LY KI+    ILI CLYVDDLI+TG++ +MF +FKK M 
Sbjct: 995  NTRIDKYFKEKDFIKCPYEHALYIKIQKED-ILIACLYVDDLIFTGNNPSMFEEFKKEMT 1053

Query: 1245 DEFDMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRFQMQNCNSASTPIEVGLKLI 1424
             EF+M+D+G M Y+LGIEVKQ D GIFI+Q+ Y +E+L +F+M + N   TP+E G+KL 
Sbjct: 1054 KEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLS 1113

Query: 1425 KDSDEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYMECPREMHLLAAKRILRYLQ 1604
            K  + E VD T +K +VGSL YLT TRPDI+Y V ++SRYME P   H  AAKRILRY++
Sbjct: 1114 KKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIK 1173

Query: 1605 GTSDYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFMLGLGAISWSSKKQSIVTLS 1784
            GT ++ L Y    +  L+ ++DSD+ GD+DDRKSTSG+VF +G  A +W SKKQ IV LS
Sbjct: 1174 GTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLS 1233

Query: 1785 TTEAEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNSSTIKLSKNPVLHGRSKHID 1964
            T EAE+VAAT+CVC AIWLR +L+E+   QE PT I+ DN S I L+KNPV H RSKHID
Sbjct: 1234 TCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHID 1293

Query: 1965 VKFYFLRDLSRDGVINLIYCRSEDQIADIFTKSLKLTSFVKLRKLLGL 2108
             +++++R+      + L Y ++ DQ+ADIFTK LK   F+K+R LLG+
Sbjct: 1294 TRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGV 1341


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  771 bits (1992), Expect = 0.0
 Identities = 376/708 (53%), Positives = 502/708 (70%), Gaps = 6/708 (0%)
 Frame = +3

Query: 3    TIMNMVRSLLTRSGVPKSFWPEAVNWSIHILNRSPTLVVQNMTPEEAWSRRRPSMDYFRI 182
            TI+ M RS+L    +PK  W EAV  ++++LNRSPT  V   TP+EAWS R+P + + R+
Sbjct: 637  TILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRV 696

Query: 183  FGCISYAHIPDEKRRKLDDKGEKCIFLGVSDQSKAYKLYNPISKKIIISRDVVFDEEKYW 362
            FG I++AH+PDEKR KLDDK EK IF+G  + SK YKLYNP +KK IISR++VFDEE  W
Sbjct: 697  FGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEW 756

Query: 363  SWNNDGVQQQIPADFDXXXXXXXXXXXXXX------LYPAATQNEERPQRARRRPTWMAD 524
             WN++         F+                      P ++Q EE    + R P + + 
Sbjct: 757  DWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEE--SSSERTPRFRSI 814

Query: 525  YEVTGYNQSEDPLIHFSLFSDCDPTTFEEAVKEPRWQKAMDEEIAAIERNNTWELTKLPK 704
             E+    ++++ L  F LF++C+P  F++A+++  W+ AMDEEI +I++N+TWELT LP 
Sbjct: 815  QELYEVTENQENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPN 874

Query: 705  GHKTIGVKWVYKTKLKENGEVDKYRARLVAKGYKQEFGVDYREVFAPVARLDTVRLLVAL 884
            GHK IGVKWVYK K    GEV++Y+ARLVAKGY Q  G+DY EVFAPVARL+TVRL+++L
Sbjct: 875  GHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISL 934

Query: 885  AAQNSWPIFQLDVKSAFLHGNLDEQVFIDQPPGYVRIGEEHKVYKLKKALYGLKQAPRAW 1064
            AAQN W I Q+DVKSAFL+G+L+E+V+I+QP GY+  GEE KV +LKK LYGLKQAPRAW
Sbjct: 935  AAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAW 994

Query: 1065 YSRIDAYFSKEGFRKCPYEHTLYTKIEDGGKILIICLYVDDLIYTGSDSAMFVKFKKSMM 1244
             +RID YF ++ F KCPYEH LY KI+    ILI CLYVDDLI+TG++ ++F +FKK M 
Sbjct: 995  NTRIDKYFKEKDFIKCPYEHALYIKIQKED-ILIACLYVDDLIFTGNNPSIFEEFKKEMT 1053

Query: 1245 DEFDMSDLGGMHYFLGIEVKQSDVGIFISQKKYVQEILNRFQMQNCNSASTPIEVGLKLI 1424
             EF+M+D+G M Y+LGIEVKQ D GIFI+Q+ Y +E+L +F+M + N   TP+E G+KL 
Sbjct: 1054 KEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLS 1113

Query: 1425 KDSDEEKVDSTFYKQIVGSLMYLTATRPDIMYVVSLISRYMECPREMHLLAAKRILRYLQ 1604
            K  + E VD T +K +VGSL YLT TRPDI+Y V ++SRYME P   H  AAKRILRY++
Sbjct: 1114 KKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIK 1173

Query: 1605 GTSDYELFYKKGENSSLMDFTDSDYAGDLDDRKSTSGYVFMLGLGAISWSSKKQSIVTLS 1784
            GT ++ L Y    +  L+ ++DSD+ GD+DDRKSTSG+VF +G  A +W SKKQ IVTLS
Sbjct: 1174 GTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLS 1233

Query: 1785 TTEAEFVAATTCVCQAIWLRKILEEIHFKQEGPTPIYCDNSSTIKLSKNPVLHGRSKHID 1964
            T EAE+VAAT+CVC AIWLR +L+E+   QE PT I+ DN S I L+KNPV H RSKHID
Sbjct: 1234 TCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHID 1293

Query: 1965 VKFYFLRDLSRDGVINLIYCRSEDQIADIFTKSLKLTSFVKLRKLLGL 2108
             +++++R+      + L Y ++ DQ+AD FTK LK  +F+K+R LLG+
Sbjct: 1294 TRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGV 1341