BLASTX nr result
ID: Rehmannia27_contig00051654
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00051654
(619 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011093631.1| PREDICTED: DNA topoisomerase 1-like [Sesamum... 157 1e-62
gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Erythra... 143 9e-50
ref|XP_012845487.1| PREDICTED: DNA topoisomerase 1-like [Erythra... 143 1e-49
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 91 1e-36
ref|XP_006364175.2| PREDICTED: DNA topoisomerase 1-like [Solanum... 102 3e-35
ref|XP_015082175.1| PREDICTED: DNA topoisomerase 1 isoform X1 [S... 95 1e-32
ref|XP_015082176.1| PREDICTED: DNA topoisomerase 1 isoform X2 [S... 95 1e-32
gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|g... 99 7e-32
ref|XP_009619726.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 99 3e-31
emb|CDP13767.1| unnamed protein product [Coffea canephora] 87 1e-30
ref|XP_010266803.1| PREDICTED: DNA topoisomerase 1-like [Nelumbo... 80 7e-30
ref|XP_009790344.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 96 8e-30
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 84 9e-29
gb|KVH96852.1| DNA breaking-rejoining enzyme, catalytic core [Cy... 81 1e-27
gb|KVI01089.1| DNA breaking-rejoining enzyme, catalytic core [Cy... 79 3e-27
gb|KHG20024.1| DNA topoisomerase 1 -like protein [Gossypium arbo... 75 6e-27
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] 80 2e-26
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g... 79 2e-26
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata] 79 2e-26
ref|XP_010252639.1| PREDICTED: DNA topoisomerase 1-like [Nelumbo... 75 3e-26
>ref|XP_011093631.1| PREDICTED: DNA topoisomerase 1-like [Sesamum indicum]
Length = 893
Score = 157 bits (396), Expect(2) = 1e-62
Identities = 80/113 (70%), Positives = 91/113 (80%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSNTG 438
EDDKPLS RLP GLSKVNSNHANKG NA T QK+ IPK +DSDD++PLSSKF+ KSN G
Sbjct: 147 EDDKPLSARLPAGLSKVNSNHANKGPNALTSVQKTKIPKPEDSDDEIPLSSKFQVKSNAG 206
Query: 437 VSTSRSSHSEGKKSFLVKADQNGSASIERTPSSILKKRPADGVASAGQSHIKK 279
ST+R S S +K L K DQNGSAS ER PS+ILKKRPADGV SAG+S++KK
Sbjct: 207 ESTNRPSISGERKPLLAKYDQNGSASAERKPSTILKKRPADGVKSAGESYLKK 259
Score = 110 bits (276), Expect(2) = 1e-62
Identities = 57/97 (58%), Positives = 66/97 (68%)
Frame = -2
Query: 291 SYKKKPKISDASTSNKNKEASAKSEVKAEDEEDHVPIAQRMKKPTFADKKSSSAKKVTKH 112
SY KKPK+SDAST NK KE S K E+K ED+EDHVPI+QR+K+ T +DKKSSSAK +TK
Sbjct: 255 SYLKKPKLSDASTPNKTKETSIKDEMKDEDDEDHVPISQRIKQQTSSDKKSSSAKNMTKP 314
Query: 111 XXXXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
YS+SSKVPPSSGEGQKW
Sbjct: 315 ISASAKKTSKKPKKVMKNSKYSKSSKVPPSSGEGQKW 351
>gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Erythranthe guttata]
Length = 883
Score = 143 bits (361), Expect(2) = 9e-50
Identities = 75/114 (65%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSNTG 438
EDDKPLS R G SK N N NK NA LG+KSN+PK +DSDD++PLS+KF+ KSN G
Sbjct: 137 EDDKPLSARQVAGSSKNNPNQTNKP-NAPNLGKKSNVPKPEDSDDEIPLSAKFQGKSNAG 195
Query: 437 VSTSRSSHSEGKKSFLV-KADQNGSASIERTPSSILKKRPADGVASAGQSHIKK 279
STSRSSHSE KK + K D+NGSAS ER PS++L+KRPADGVASAGQS++KK
Sbjct: 196 ASTSRSSHSEEKKPLVARKPDKNGSASTERKPSTVLQKRPADGVASAGQSNLKK 249
Score = 81.3 bits (199), Expect(2) = 9e-50
Identities = 47/95 (49%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Frame = -2
Query: 282 KKPKISDASTSNKNKEASAKSEVKAEDEEDHVPIAQRMKKPTFADKKSSSAKKV-TKHXX 106
KKPK+SD S ++K+K+AS K EVKAED+ED VP++QR KK T +KK S A K K
Sbjct: 248 KKPKLSD-SLASKDKKASVKPEVKAEDDEDLVPLSQRTKKSTTPEKKPSPALKTNNKTNS 306
Query: 105 XXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
YS+SSK+PPSSG+GQKW
Sbjct: 307 KTNSKTNKKSKQVSKDNNYSKSSKLPPSSGDGQKW 341
>ref|XP_012845487.1| PREDICTED: DNA topoisomerase 1-like [Erythranthe guttata]
Length = 894
Score = 143 bits (361), Expect(2) = 1e-49
Identities = 75/114 (65%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSNTG 438
EDDKPLS R G SK N N NK NA LG+KSN+PK +DSDD++PLS+KF+ KSN G
Sbjct: 137 EDDKPLSARQVAGSSKNNPNQTNKP-NAPNLGKKSNVPKPEDSDDEIPLSAKFQGKSNAG 195
Query: 437 VSTSRSSHSEGKKSFLV-KADQNGSASIERTPSSILKKRPADGVASAGQSHIKK 279
STSRSSHSE KK + K D+NGSAS ER PS++L+KRPADGVASAGQS++KK
Sbjct: 196 ASTSRSSHSEEKKPLVARKPDKNGSASTERKPSTVLQKRPADGVASAGQSNLKK 249
Score = 80.9 bits (198), Expect(2) = 1e-49
Identities = 49/106 (46%), Positives = 61/106 (57%), Gaps = 12/106 (11%)
Frame = -2
Query: 282 KKPKISDASTSNKNKEASAKSEVKAEDEEDHVPIAQRMKKPTFADKKSSSAKKVTKH--- 112
KKPK+SD S ++K+K+AS K EVKAED+ED VP++QR KK T +KK S A KVTK
Sbjct: 248 KKPKLSD-SLASKDKKASVKPEVKAEDDEDLVPLSQRTKKSTTPEKKPSPALKVTKSTAS 306
Query: 111 ---------XXXXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
YS+SSK+PPSSG+GQKW
Sbjct: 307 ISKKTNNKTNSKTNSKTNKKSKQVSKDNNYSKSSKLPPSSGDGQKW 352
>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
Length = 894
Score = 91.3 bits (225), Expect(2) = 1e-36
Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = -2
Query: 282 KKPKISDASTSNKNKEASAKSEVKAED-EEDHVPIAQRMKKPTFADKKSSSAK-KVTKHX 109
KKPK+SDAST NK+AS K+E KA+D ++DHVPI+QRMKK + KSS+AK KVTK
Sbjct: 257 KKPKLSDASTPVNNKQASKKAEPKADDSDDDHVPISQRMKKSATSGNKSSTAKQKVTKVV 316
Query: 108 XXXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
YS+SSKVPPSSGEG+KW
Sbjct: 317 SSSMKKASKKFKKVVKKSKYSKSSKVPPSSGEGKKW 352
Score = 89.4 bits (220), Expect(2) = 1e-36
Identities = 54/119 (45%), Positives = 73/119 (61%), Gaps = 6/119 (5%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTK------DSDDDVPLSSKFK 456
ED+KPLS RL TGL+K +SN+ANKGL S+ +PK + DSDD++PLSSKF+
Sbjct: 141 EDEKPLSARLFTGLTKGSSNNANKGLINSSPASLP-VPKPEINRYSDDSDDEIPLSSKFR 199
Query: 455 AKSNTGVSTSRSSHSEGKKSFLVKADQNGSASIERTPSSILKKRPADGVASAGQSHIKK 279
K+N G ST +S S+ K+ + QNGS + S + KRP V S+ QS +KK
Sbjct: 200 LKANAGTSTVKSYESDDNKTLVSNFQQNGSINRGSKSSIKVNKRPLGEVKSSVQSSVKK 258
>ref|XP_006364175.2| PREDICTED: DNA topoisomerase 1-like [Solanum tuberosum]
Length = 905
Score = 102 bits (254), Expect(2) = 3e-35
Identities = 59/113 (52%), Positives = 74/113 (65%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSNTG 438
EDDKPLS R+P+GLSK NS HAN L ST QKS PK +DSDD++PL+S+F+ KS+ G
Sbjct: 167 EDDKPLSARVPSGLSKSNSIHANNVLGTSTSVQKSRPPKKEDSDDEIPLASRFQMKSSAG 226
Query: 437 VSTSRSSHSEGKKSFLVKADQNGSASIERTPSSILKKRPADGVASAGQSHIKK 279
STS+ S SE K K QNG S +++L KRP V SA Q+ +KK
Sbjct: 227 ASTSKFSSSEEVKP---KIRQNGLPS-----ATVLSKRPPGEVKSAAQASVKK 271
Score = 73.6 bits (179), Expect(2) = 3e-35
Identities = 38/94 (40%), Positives = 53/94 (56%)
Frame = -2
Query: 282 KKPKISDASTSNKNKEASAKSEVKAEDEEDHVPIAQRMKKPTFADKKSSSAKKVTKHXXX 103
KKP++SDAST +K+ S K+E K ED++D VP++QR+KK + S+S K
Sbjct: 270 KKPRLSDASTPVSSKQPSVKTEKKTEDDDDEVPLSQRIKKAVASASASASKVSSVKKATK 329
Query: 102 XXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
YS+SSK+ PSSG+GQKW
Sbjct: 330 VVSSSMKKTKKKLKKPKYSKSSKLQPSSGDGQKW 363
>ref|XP_015082175.1| PREDICTED: DNA topoisomerase 1 isoform X1 [Solanum pennellii]
Length = 903
Score = 95.1 bits (235), Expect(2) = 1e-32
Identities = 58/113 (51%), Positives = 71/113 (62%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSNTG 438
+DDK LS R+P+GLSK NS HA K L ST QKS PK +DSDD+ PL+S+F KSN G
Sbjct: 143 DDDKLLSSRVPSGLSKSNSVHAKKVLCTSTSVQKSRPPKKEDSDDETPLASRFPMKSNAG 202
Query: 437 VSTSRSSHSEGKKSFLVKADQNGSASIERTPSSILKKRPADGVASAGQSHIKK 279
STS+ S SE K K QNG S +++L KRP V SA Q+ +KK
Sbjct: 203 ASTSKFSSSEEVKP---KIRQNGLPS-----ATVLSKRPPGEVKSAAQASVKK 247
Score = 72.0 bits (175), Expect(2) = 1e-32
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Frame = -2
Query: 282 KKPKISDASTSNKNKEASAKSEVKAEDEEDHVPIAQRMKKPTFADKKSSSAKKVT--KHX 109
KKP++SDAST +K+ K+E K ED++D VPI+QR+KK D S+SA KV+ K
Sbjct: 246 KKPRLSDASTPVSSKQPPFKTEKKTEDDDDDVPISQRIKKA--VDSASASASKVSYVKKA 303
Query: 108 XXXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
YS+SSK+ PSSG+GQKW
Sbjct: 304 TKVVSSSMKKTKKKLKKPKYSKSSKLQPSSGDGQKW 339
>ref|XP_015082176.1| PREDICTED: DNA topoisomerase 1 isoform X2 [Solanum pennellii]
Length = 881
Score = 95.1 bits (235), Expect(2) = 1e-32
Identities = 58/113 (51%), Positives = 71/113 (62%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSNTG 438
+DDK LS R+P+GLSK NS HA K L ST QKS PK +DSDD+ PL+S+F KSN G
Sbjct: 143 DDDKLLSSRVPSGLSKSNSVHAKKVLCTSTSVQKSRPPKKEDSDDETPLASRFPMKSNAG 202
Query: 437 VSTSRSSHSEGKKSFLVKADQNGSASIERTPSSILKKRPADGVASAGQSHIKK 279
STS+ S SE K K QNG S +++L KRP V SA Q+ +KK
Sbjct: 203 ASTSKFSSSEEVKP---KIRQNGLPS-----ATVLSKRPPGEVKSAAQASVKK 247
Score = 72.0 bits (175), Expect(2) = 1e-32
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Frame = -2
Query: 282 KKPKISDASTSNKNKEASAKSEVKAEDEEDHVPIAQRMKKPTFADKKSSSAKKVT--KHX 109
KKP++SDAST +K+ K+E K ED++D VPI+QR+KK D S+SA KV+ K
Sbjct: 246 KKPRLSDASTPVSSKQPPFKTEKKTEDDDDDVPISQRIKKA--VDSASASASKVSYVKKA 303
Query: 108 XXXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
YS+SSK+ PSSG+GQKW
Sbjct: 304 TKVVSSSMKKTKKKLKKPKYSKSSKLQPSSGDGQKW 339
>gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|gb|AAK69776.1|
topoisomerase I [Nicotiana tabacum]
Length = 852
Score = 99.0 bits (245), Expect(2) = 7e-32
Identities = 61/119 (51%), Positives = 77/119 (64%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSNTG 438
EDDKPLS RL +GLSK NS+HANK L S QKS PK +DSDD++PL+S+F+ KSN G
Sbjct: 144 EDDKPLSARLSSGLSKSNSSHANKVLGTSASVQKSRPPKKEDSDDEIPLASRFQLKSNAG 203
Query: 437 VSTSRSSHSEGKKSFLVKADQNGSASIERTPSSILKKRPADGVASAGQSHIKKSLRFQM 261
STS+SS+SE K K QNG S +++L KRP V+ + + KSL F M
Sbjct: 204 ASTSKSSNSEEVKP---KIRQNGLPS-----TTVLSKRPPGDVSLLLRLQL-KSLGFLM 253
Score = 65.9 bits (159), Expect(2) = 7e-32
Identities = 38/79 (48%), Positives = 45/79 (56%)
Frame = -2
Query: 237 EASAKSEVKAEDEEDHVPIAQRMKKPTFADKKSSSAKKVTKHXXXXXXXXXXXXXXXXXX 58
EAS K E K ED++D VPI+QR+KK + K SSAKK TK
Sbjct: 262 EASVKPEKKTEDDDDDVPISQRIKKSVASASKLSSAKKATK-----VVSSSMKTKKKLKK 316
Query: 57 XMYSQSSKVPPSSGEGQKW 1
YS+SSK+ PSSGEGQKW
Sbjct: 317 SKYSKSSKLQPSSGEGQKW 335
>ref|XP_009619726.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Nicotiana
tomentosiformis]
Length = 877
Score = 99.0 bits (245), Expect(2) = 3e-31
Identities = 61/119 (51%), Positives = 77/119 (64%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSNTG 438
EDDKPLS RL +GLSK NS+HANK L S QKS PK +DSDD++PL+S+F+ KSN G
Sbjct: 144 EDDKPLSARLSSGLSKSNSSHANKVLGTSASVQKSRPPKKEDSDDEIPLASRFQLKSNAG 203
Query: 437 VSTSRSSHSEGKKSFLVKADQNGSASIERTPSSILKKRPADGVASAGQSHIKKSLRFQM 261
STS+SS+SE K K QNG S +++L KRP V+ + + KSL F M
Sbjct: 204 ASTSKSSNSEEVKP---KIRQNGLPS-----TTVLSKRPPGDVSLLLRLQL-KSLGFLM 253
Score = 63.9 bits (154), Expect(2) = 3e-31
Identities = 37/78 (47%), Positives = 44/78 (56%)
Frame = -2
Query: 234 ASAKSEVKAEDEEDHVPIAQRMKKPTFADKKSSSAKKVTKHXXXXXXXXXXXXXXXXXXX 55
AS K E K ED++D VPI+QR+KK + K SSAKK TK
Sbjct: 263 ASVKPEKKTEDDDDDVPISQRIKKSVASASKLSSAKKATK-----VVSSSMKTKKKLKKS 317
Query: 54 MYSQSSKVPPSSGEGQKW 1
YS+SSK+ PSSGEGQKW
Sbjct: 318 KYSKSSKLQPSSGEGQKW 335
>emb|CDP13767.1| unnamed protein product [Coffea canephora]
Length = 926
Score = 87.0 bits (214), Expect(2) = 1e-30
Identities = 50/116 (43%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSNTG 438
+DDKPL +LP+G S+ NH NK + S+L QK + + +DSDD+ PLSS++ +KSN
Sbjct: 151 DDDKPLMAKLPSGSSRAIVNHGNKDGDGSSLVQKPGVEEDEDSDDEKPLSSRYLSKSNLV 210
Query: 437 VSTSRSSHSEGKKSFLVKADQNGSASIE---RTPSSILKKRPADGVASAGQSHIKK 279
S S+S + KKS K QNGSA + SS+ KRP V S+ +S +KK
Sbjct: 211 ESISKSRNPGEKKSLPAKVQQNGSALRDGPVGKSSSLSNKRPPGEVKSSDESAVKK 266
Score = 73.6 bits (179), Expect(2) = 1e-30
Identities = 43/106 (40%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Frame = -2
Query: 300 RSISYKKKPKISD------ASTSNKNKEASAKSEVKAEDEEDHVPIAQRMKKPTFADKKS 139
+ + K +PK+ D S + K ASA +D++DHVPI QRMKK T + +S
Sbjct: 279 KQATLKAEPKVEDDDDDILISQTAKKMFASASKPKSNDDDDDHVPITQRMKKSTTSVSQS 338
Query: 138 SSAKKVTKHXXXXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
SS KKV K YS+SSKVPP SGEGQKW
Sbjct: 339 SSVKKVAKVVSSSLKKTNKKSKKIIKKSKYSKSSKVPPGSGEGQKW 384
>ref|XP_010266803.1| PREDICTED: DNA topoisomerase 1-like [Nelumbo nucifera]
Length = 890
Score = 79.7 bits (195), Expect(2) = 7e-30
Identities = 45/97 (46%), Positives = 56/97 (57%)
Frame = -2
Query: 291 SYKKKPKISDASTSNKNKEASAKSEVKAEDEEDHVPIAQRMKKPTFADKKSSSAKKVTKH 112
S KK K+S+ S K K+ S KSE K EDE+D +PI+QR+KK +D KS S KK TK
Sbjct: 253 SLVKKLKVSEVSVPTKVKQTSIKSEPKEEDEDD-IPISQRLKKSASSDDKSLSLKKTTKV 311
Query: 111 XXXXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
YS+S+K+PPSSGEGQKW
Sbjct: 312 VSSSFKKTTNKLKKAAKNSKYSKSTKMPPSSGEGQKW 348
Score = 78.6 bits (192), Expect(2) = 7e-30
Identities = 50/125 (40%), Positives = 72/125 (57%), Gaps = 12/125 (9%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLS--KVNSNHANKGLNA----STLGQKSNIPKTK---DSDDDVPLSS 465
+DDKPLS+RLPT S K S+ +KGL++ S+ +K+N+ K DS+D++PLS
Sbjct: 133 DDDKPLSIRLPTSASLLKCKSSPVSKGLSSPVASSSQSEKTNVTNKKSSEDSEDELPLSL 192
Query: 464 KFKAKSNTGVSTSRSSHSEGKKSFLVKADQNGSASIERTP---SSILKKRPADGVASAGQ 294
K K K + G+S + S +K + K QNGS+ + P L KRP G S+GQ
Sbjct: 193 KLKLKPSVGLSGKKFYDSGEEKPLVSKLQQNGSSKRDNEPLKSPKNLNKRPLSGANSSGQ 252
Query: 293 SHIKK 279
S +KK
Sbjct: 253 SLVKK 257
>ref|XP_009790344.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Nicotiana
sylvestris]
Length = 876
Score = 95.5 bits (236), Expect(2) = 8e-30
Identities = 60/119 (50%), Positives = 76/119 (63%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSNTG 438
EDDKPLS RL +GLSK S+HANK L S QKS PK +DSDD++PL+S+F+ KSN G
Sbjct: 143 EDDKPLSARLSSGLSKSISSHANKVLGTSASVQKSKPPKKEDSDDEIPLASRFQLKSNAG 202
Query: 437 VSTSRSSHSEGKKSFLVKADQNGSASIERTPSSILKKRPADGVASAGQSHIKKSLRFQM 261
STS+SS+SE K K QNG S +++L KRP V+ + + KSL F M
Sbjct: 203 ASTSKSSNSEEVKP---KIRQNGLPS-----TTVLSKRPPGDVSLLLRLQL-KSLGFLM 252
Score = 62.4 bits (150), Expect(2) = 8e-30
Identities = 36/78 (46%), Positives = 43/78 (55%)
Frame = -2
Query: 234 ASAKSEVKAEDEEDHVPIAQRMKKPTFADKKSSSAKKVTKHXXXXXXXXXXXXXXXXXXX 55
AS K E K ED++D VPI+QR+KK + K SS KK TK
Sbjct: 262 ASVKPEKKTEDDDDDVPISQRIKKSVASASKVSSTKKATK-----VVSSSMKTKKKLKKS 316
Query: 54 MYSQSSKVPPSSGEGQKW 1
YS+SSK+ PSSGEGQKW
Sbjct: 317 KYSKSSKLQPSSGEGQKW 334
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 84.3 bits (207), Expect(2) = 9e-29
Identities = 45/95 (47%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = -2
Query: 282 KKPKISDASTSNKNKEASAKSEVKAEDEED-HVPIAQRMKKPTFADKKSSSAKKVTKHXX 106
KKPK+S + K+AS K E KAED++D H+PI+QR+KK ++ KSSS KK TK
Sbjct: 272 KKPKLSSVTAPTNKKQASVKPEPKAEDDDDDHLPISQRIKKSPTSESKSSSIKKTTKVVS 331
Query: 105 XXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
YS+SSKVPPSSGEG+KW
Sbjct: 332 SSVKKVNKKSKKVMKNSKYSKSSKVPPSSGEGKKW 366
Score = 70.1 bits (170), Expect(2) = 9e-29
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSNTG 438
+D KPLS+R SK N+N +K + + P+ +DSDD+ PLSS+F KS G
Sbjct: 167 DDGKPLSLRHSASSSKGNTNQVSK---------EGSKPENEDSDDEKPLSSRFPLKSGVG 217
Query: 437 VSTSRSSHSEGKKSFLVKADQNGSASIERTP---SSILKKRPADGVASAGQSHIKK 279
STS++ S+ K K NGSA + P S++ KRP + S+ Q +KK
Sbjct: 218 ESTSKAYDSDDDKPLAKKLQHNGSAMRDGQPNKYSNMSNKRPPGDIKSSNQLSVKK 273
>gb|KVH96852.1| DNA breaking-rejoining enzyme, catalytic core [Cynara cardunculus
var. scolymus]
Length = 849
Score = 81.3 bits (199), Expect(2) = 1e-27
Identities = 52/116 (44%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSNTG 438
EDDKPLS R+ T + K NSNH G + S + K +DSDD+ PLSSKF KS
Sbjct: 56 EDDKPLSSRIST-VPKANSNHVKVGPSMSASQRSKTQVKNEDSDDEKPLSSKFTPKSYVS 114
Query: 437 VSTSRSSHSEGKKSFLVKADQNGSASIE---RTPSSILKKRPADGVASAGQSHIKK 279
S + S+ K K QNGSAS + R P+ L KRP + S GQS IKK
Sbjct: 115 ASIRKHDDSDDDKPLSSKVKQNGSASRDNQSRKPNIGLNKRPPNEENSLGQSSIKK 170
Score = 69.7 bits (169), Expect(2) = 1e-27
Identities = 42/96 (43%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Frame = -2
Query: 282 KKPKISDASTSNKNKEASAKSEVKAEDEE-DHVPIAQRMKKPTFADKKSSSAK-KVTKHX 109
KKPK+SD+S K S K E + +D+E DHVPI+QRMK + KS+S K K K
Sbjct: 169 KKPKLSDSSAPINRKPVSVKPESETDDDENDHVPISQRMKNKAPSGSKSASIKQKSIKVN 228
Query: 108 XXXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
YS+ SKVPP SGEGQKW
Sbjct: 229 SSSFKKTIKKSKKIEKNSKYSKPSKVPPGSGEGQKW 264
>gb|KVI01089.1| DNA breaking-rejoining enzyme, catalytic core [Cynara cardunculus
var. scolymus]
Length = 778
Score = 79.0 bits (193), Expect(2) = 3e-27
Identities = 57/118 (48%), Positives = 70/118 (59%), Gaps = 5/118 (4%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKG--LNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSN 444
EDDKPLS RL T +SK N+NHA KG +N S L + K +DSDD+ PLSSK+ +K N
Sbjct: 44 EDDKPLSFRLST-VSKGNTNHAKKGSCMNVSPLPKPQ--VKDEDSDDEKPLSSKYISKPN 100
Query: 443 TGVSTSRSSHSEGKKSFLVKADQNGSASIE---RTPSSILKKRPADGVASAGQSHIKK 279
S S+ S S K+ K QNGSAS + R+ SI KRP D S+ QS KK
Sbjct: 101 VVSSISKHSGSNNDKTLTSKVHQNGSASRDNQSRSTGSI--KRPLDEERSSSQSLAKK 156
Score = 70.5 bits (171), Expect(2) = 3e-27
Identities = 41/100 (41%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = -2
Query: 297 SISYKKKPKISDASTSNKNKEASAKSEVKAED-EEDHVPIAQRMKKPTFADKKSSSAKKV 121
S S KKPK+S++ST K+ K+E +++D EED VPI+QR+K + KSSS K
Sbjct: 150 SQSLAKKPKLSESSTPINRKQVPLKAETESDDDEEDDVPISQRIKNHAPSGSKSSSVKHK 209
Query: 120 TKHXXXXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
YS+ SKVPP SGEGQKW
Sbjct: 210 VTKKNSSLKETNKKSKKVVKNSKYSKPSKVPPGSGEGQKW 249
>gb|KHG20024.1| DNA topoisomerase 1 -like protein [Gossypium arboreum]
Length = 903
Score = 75.5 bits (184), Expect(2) = 6e-27
Identities = 52/122 (42%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSN-IPK------TKDSDDDVPLSSKF 459
+D KPLS RL K S+ NKG++ ST Q +PK +D DDD PLS++F
Sbjct: 153 DDSKPLSARL-----KGISSQGNKGVSTSTPAQSQRFVPKIEVKGSAEDPDDDAPLSARF 207
Query: 458 KAKSNTGVSTSRSSHSEGKKSFLVKADQNGS-ASIERTPSSILK-KRPADGVASAGQSHI 285
KSNTG S+S+ S KK K QNGS +++ SS+L KRP D S+ QS+
Sbjct: 208 STKSNTGTSSSKPYGSHEKKPLASKIQQNGSIMKVKQQKSSMLSDKRPLDKGNSSDQSYA 267
Query: 284 KK 279
KK
Sbjct: 268 KK 269
Score = 72.8 bits (177), Expect(2) = 6e-27
Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = -2
Query: 291 SYKKKPKISDASTSNKNKEASAKSEVKAEDEEDHVPIAQRMKKPTFADKKSSSAK-KVTK 115
SY KKPKISD T K K+ + K+E +DE+DH+PI+QR+KK + K+SS K K TK
Sbjct: 265 SYAKKPKISDTPTMMKTKQVTVKAE--KDDEDDHIPISQRIKKSVSSVSKASSVKQKATK 322
Query: 114 HXXXXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQK 4
YS+S+K+ PSSG+GQK
Sbjct: 323 VVSSSFKKINKKSKKDMKKSKYSKSTKLSPSSGDGQK 359
>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
Length = 925
Score = 79.7 bits (195), Expect(2) = 2e-26
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSNTG 438
+D+KPLS R SK SNHANK S ++ I +++DS+D+ PLS +F +KS+ G
Sbjct: 150 DDEKPLSARTFGCSSKGKSNHANKEGGDSCSIRRPVIEESEDSEDEKPLSCRFTSKSSLG 209
Query: 437 VSTSRSSHSEGKKSFLVKADQNGSASIE---RTPSSILKKRPADGVASAGQSHIKK 279
STS+S S+ KK K QNGSAS + +S+ KRP S QS +KK
Sbjct: 210 ESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKRPPGEAKSLNQSSVKK 265
Score = 66.6 bits (161), Expect(2) = 2e-26
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 25/119 (21%)
Frame = -2
Query: 282 KKPKISDASTSNKNKEASAKSEVKAEDEEDHVPIAQRMKK-------------------- 163
KKPK+S TS NK+A+ K E KAED++D++P++QR KK
Sbjct: 264 KKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQSATSKPKDDDDDNVPISQ 323
Query: 162 -----PTFADKKSSSAKKVTKHXXXXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
P K S KK + Y++SSKVPP SGEGQKW
Sbjct: 324 RIKKSPASVSKSSVPVKKASTVVSSSLKKVNKNSKKVIKKTAYTKSSKVPPGSGEGQKW 382
>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
Length = 920
Score = 78.6 bits (192), Expect(2) = 2e-26
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSNTG 438
+D+KPLS R SK SNHANK S ++ I +++DS+D+ PLS +F +KS+ G
Sbjct: 151 DDEKPLSARTFGCSSKGKSNHANKEGGDSCSIRRPVIEESEDSEDEKPLSRRFTSKSSLG 210
Query: 437 VSTSRSSHSEGKKSFLVKADQNGSASIE---RTPSSILKKRPADGVASAGQSHIKK 279
STS+S S+ KK K NGSAS + +S+ KRP V S QS +KK
Sbjct: 211 ESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKSASLSNKRPPGEVKSLNQSSLKK 266
Score = 67.8 bits (164), Expect(2) = 2e-26
Identities = 41/119 (34%), Positives = 54/119 (45%), Gaps = 25/119 (21%)
Frame = -2
Query: 282 KKPKISDASTSNKNKEASAKSEVKAEDEEDHVPIAQRMKK-------------------- 163
KKPK+S TS NK+A+ K E KAED++D++P++QR KK
Sbjct: 265 KKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQTATSKPKDEDDDNVPISQ 324
Query: 162 -----PTFADKKSSSAKKVTKHXXXXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
P K S+ KK + Y++SSKVPP SGEGQKW
Sbjct: 325 RIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKW 383
>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
Length = 920
Score = 78.6 bits (192), Expect(2) = 2e-26
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLSKVNSNHANKGLNASTLGQKSNIPKTKDSDDDVPLSSKFKAKSNTG 438
+D+KPLS R SK SNHANK S ++ I +++DS+D+ PLS +F +KS+ G
Sbjct: 151 DDEKPLSARTFGCSSKGKSNHANKEGGDSCSIRRPVIEESEDSEDEKPLSRRFTSKSSLG 210
Query: 437 VSTSRSSHSEGKKSFLVKADQNGSASIE---RTPSSILKKRPADGVASAGQSHIKK 279
STS+S S+ KK K NGSAS + +S+ KRP V S QS +KK
Sbjct: 211 ESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKSASLSNKRPPGEVKSLNQSSLKK 266
Score = 67.8 bits (164), Expect(2) = 2e-26
Identities = 41/119 (34%), Positives = 54/119 (45%), Gaps = 25/119 (21%)
Frame = -2
Query: 282 KKPKISDASTSNKNKEASAKSEVKAEDEEDHVPIAQRMKK-------------------- 163
KKPK+S TS NK+A+ K E KAED++D++P++QR KK
Sbjct: 265 KKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQTATSKPKDEDDDNVPISQ 324
Query: 162 -----PTFADKKSSSAKKVTKHXXXXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
P K S+ KK + Y++SSKVPP SGEGQKW
Sbjct: 325 RIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKW 383
>ref|XP_010252639.1| PREDICTED: DNA topoisomerase 1-like [Nelumbo nucifera]
Length = 883
Score = 75.5 bits (184), Expect(2) = 3e-26
Identities = 47/97 (48%), Positives = 58/97 (59%)
Frame = -2
Query: 291 SYKKKPKISDASTSNKNKEASAKSEVKAEDEEDHVPIAQRMKKPTFADKKSSSAKKVTKH 112
S KKPK+S+ S K K+A KSE K ED+ED++PI+QR+KK +D KSSS KK T
Sbjct: 250 SLVKKPKLSE-SIPAKVKQAPIKSEPK-EDDEDNIPISQRLKKSAPSDNKSSSTKKTT-- 305
Query: 111 XXXXXXXXXXXXXXXXXXXMYSQSSKVPPSSGEGQKW 1
YS+S+KVPPSSGEGQKW
Sbjct: 306 -TKVVSSSFKKTSKKLKKDKYSKSTKVPPSSGEGQKW 341
Score = 70.5 bits (171), Expect(2) = 3e-26
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 13/126 (10%)
Frame = -3
Query: 617 EDDKPLSVRLPTGLS--KVNSNHANKGLNASTLGQKSNIPKTK--------DSDDDVPLS 468
+DDKPLS RL T S K+ S KG + S + + KTK DS+D++PLS
Sbjct: 131 DDDKPLSFRLATSGSSLKIKSQPGTKG-HGSPVPSSLQMDKTKITCKKSSADSEDEIPLS 189
Query: 467 SKFKAKSNTGVSTSRSSHSEGKKSFLVKADQNGSASIERTPSSILK---KRPADGVASAG 297
SKF+ K+N G S+ + S+ +K + K QNGS+ + S LK KRP V ++G
Sbjct: 190 SKFQLKTNVG-SSVKKYDSDEEKPLIFKFQQNGSSKKDNELSKSLKSLNKRPMSDVNTSG 248
Query: 296 QSHIKK 279
QS +KK
Sbjct: 249 QSLVKK 254