BLASTX nr result
ID: Rehmannia27_contig00050821
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00050821
(2392 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 687 0.0
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab... 674 0.0
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo... 644 0.0
gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposo... 629 0.0
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera] 628 0.0
gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposo... 619 0.0
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera] 592 0.0
emb|CAN80547.1| hypothetical protein VITISV_010898 [Vitis vinifera] 504 e-173
emb|CAN75900.1| hypothetical protein VITISV_033582 [Vitis vinifera] 509 e-173
emb|CAN70756.1| hypothetical protein VITISV_014702 [Vitis vinifera] 416 e-148
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf... 403 e-147
ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r... 456 e-147
gb|KYP38661.1| Retrovirus-related Pol polyprotein from transposo... 407 e-145
ref|XP_010532348.1| PREDICTED: uncharacterized protein LOC104808... 471 e-143
gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposo... 447 e-136
ref|XP_007022140.1| Cysteine-rich RLK (RECEPTOR-like protein kin... 405 e-136
gb|KYP48329.1| Retrovirus-related Pol polyprotein from transposo... 371 e-135
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 439 e-133
gb|KYP34377.1| Retrovirus-related Pol polyprotein from transposo... 426 e-132
ref|XP_013745170.1| PREDICTED: uncharacterized protein LOC106447... 433 e-132
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 687 bits (1774), Expect = 0.0
Identities = 340/647 (52%), Positives = 445/647 (68%), Gaps = 5/647 (0%)
Frame = -2
Query: 2388 DVWGPFSHPTIEGFKYFLTIVDDCTRFTWTYLLRLKSEVTSILPSFFTLNRTQFGVSIKN 2209
D WGPF+ PT EG+KYFLTIVDD +R TW YL++ K++V I P F + TQ+G +K
Sbjct: 648 DTWGPFATPTTEGYKYFLTIVDDYSRATWVYLMKAKNDVLQIFPDFLKMVETQYGTLVKA 707
Query: 2208 VRTDNAPEFALTQFFADSGIHHQLSCVECPQQNARVKRKHQHLLNVARALLFQSNIPLVY 2029
VR+DNAPE + GI SC E PQQN+ V+RKHQH+LNVARAL+F++N+PL +
Sbjct: 708 VRSDNAPELRFEALYQAKGIISYHSCPETPQQNSVVERKHQHILNVARALMFEANMPLEF 767
Query: 2028 WGDCILTSTYLINRLPTPLLHSKSPFECLFLRPPTYEHLKVFGCLAYGSTLLRGRTKFSP 1849
WGDCIL++ +LINRLPTPLL +KSPFE L L+ P Y LKVFGCL Y ST + R KF+P
Sbjct: 768 WGDCILSAVFLINRLPTPLLSNKSPFELLHLKVPDYTSLKVFGCLCYESTSPQQRHKFAP 827
Query: 1848 RACKSVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHEHTXXXXXXXXXXXXXXXXXPDTV 1669
RA VFLGYPSGYKGYKLLDL TNTI+ISR+V+F+E D
Sbjct: 828 RARACVFLGYPSGYKGYKLLDLETNTIHISRHVVFYETVFPFTDKTIIPR-------DVF 880
Query: 1668 XXXXXXXXXXXXXXXXPHSTPLTRSGRPLRPPSYLNDYVCSSI----SPVRYSLSQFLSY 1501
S P S R RPP YL DY C+++ VRY L+ +++Y
Sbjct: 881 DLVDPVHENIENPPSTSESAPKVSSKRESRPPGYLQDYFCNAVPDVTKDVRYPLNAYINY 940
Query: 1500 DHLSSSHRAFTLALTTVTEPKSYKEAVLHPEWQQAMQLELDALEDNNTWQLTSLPPGKHP 1321
LS A+ A+ EP +Y +A EW AM++E+DALE NTW + SLP GK P
Sbjct: 941 TQLSEEFTAYICAVNKYPEPCTYAQAKKIKEWLDAMEIEIDALESTNTWSVCSLPQGKKP 1000
Query: 1320 VGCKWVYRIKYHADGRIERYKARLVAKGYTQQEGVDYFDTFSPVAKLATVKLVLAIAAVR 1141
+GCKWV+++K +ADG +ER+KARLVAKGYTQ+EG+DY+DTFSPVAK+ TVK +L++AA++
Sbjct: 1001 IGCKWVFKVKLNADGSLERFKARLVAKGYTQREGLDYYDTFSPVAKMTTVKTLLSVAAIK 1060
Query: 1140 CWHLIQMDVTNAFLYGDLHEDVYMSLPPGYQPKGELSITSNTVCKLQKSLYGLKQASRQW 961
W L Q+D++NAFL GDL E++YM+LPPGY K + N V KLQKSLYGLKQASRQW
Sbjct: 1061 EWSLHQLDISNAFLNGDLKEEIYMTLPPGYSMKQGGVLPQNPVLKLQKSLYGLKQASRQW 1120
Query: 960 FAKFFGALLAYGFQQCPGDHSLFTLVQGSSFLALLVYVDDIVIGGNDLAAIDALKHFLST 781
+ KF L GF++ DH+LFT + G +++ALLVYVDDIVI GN+ I+ LK L+
Sbjct: 1121 YLKFSSTLKKLGFKKSHADHTLFTRISGKAYIALLVYVDDIVIAGNNDENIEELKKDLAK 1180
Query: 780 QFKLKDLGVLKYFLGFEVARNLKGLSMCQRKYTLDLLDEAGLLGCKPRSTPVEYNSKLSK 601
FKL+DLG +KYFLG E+AR +G+S+CQRKYT++LL++ GLLGC+P + P+E + KLS+
Sbjct: 1181 AFKLRDLGPMKYFLGLEIARTKEGISVCQRKYTMELLEDTGLLGCRPSTIPMEPSLKLSQ 1240
Query: 600 DSGTLLAD-PAPYRRLVGRLLYLTVTRPDITFVVHYLSQFVAVPSQA 463
+ + D P YRRLVG+L+YLT+TRPDIT+ ++ L QF + P +
Sbjct: 1241 HNDEHVIDNPEVYRRLVGKLMYLTITRPDITYAINRLCQFSSSPKNS 1287
Score = 123 bits (308), Expect(2) = 2e-32
Identities = 55/94 (58%), Positives = 71/94 (75%)
Frame = -1
Query: 478 RSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQ 299
RS +G CMFLG SLI WKSKKQN S SSAE+EYR++A + +I WL+ +L F++ +
Sbjct: 1333 RSTSGICMFLGDSLISWKSKKQNMASSSSAESEYRAMAMGSREIAWLVKLLAEFQVKQTK 1392
Query: 298 PAPLFCDNQVALYITSNPVFHERTKHIEIDCHLT 197
P PLFCD+ A++I +N VFHERTKHIE DCH+T
Sbjct: 1393 PVPLFCDSTAAIHIANNAVFHERTKHIENDCHIT 1426
Score = 47.0 bits (110), Expect(2) = 2e-32
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = -3
Query: 209 LSPDKYRAGLIKPLHVRSSCQLADILTKALSPCLFRAIVVKMGLRNIF 66
++ D+ G++K +HV ++ QLAD+LTK L P LF +++ KM L +I+
Sbjct: 1425 ITRDRIEQGMLKTMHVDTTSQLADVLTKPLFPTLFNSLIGKMSLLSIY 1472
>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 674 bits (1739), Expect = 0.0
Identities = 341/643 (53%), Positives = 433/643 (67%), Gaps = 4/643 (0%)
Frame = -2
Query: 2388 DVWGPFSHPTIEGFKYFLTIVDDCTRFTWTYLLRLKSEVTSILPSFFTLNRTQFGVSIKN 2209
DVWGPFS PT EG+ YFLTIVDD TR TW YL++ KS+V +I P F T+ TQ+ +K
Sbjct: 596 DVWGPFSEPTQEGYHYFLTIVDDHTRVTWVYLMKYKSDVLTIFPDFITMVETQYDTKVKA 655
Query: 2208 VRTDNAPEFALTQFFADSGIHHQLSCVECPQQNARVKRKHQHLLNVARALLFQSNIPLVY 2029
VR+DNAPE + + GI SC E P+QN+ V+RKHQH+LNVARALLFQS IPL Y
Sbjct: 656 VRSDNAPELKFEELYRRKGIVAYHSCPETPEQNSVVERKHQHILNVARALLFQSQIPLSY 715
Query: 2028 WGDCILTSTYLINRLPTPLLHSKSPFECLFLRPPTYEHLKVFGCLAYGSTLLRGRTKFSP 1849
WGDCILT+ ++INR P+P++ +K+ FE L + P Y HLK FGCL Y ST + R KF
Sbjct: 716 WGDCILTAVFIINRTPSPVISNKTLFEMLTKKVPDYTHLKSFGCLCYASTSPKQRHKFED 775
Query: 1848 RACKSVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHEHTXXXXXXXXXXXXXXXXXPDTV 1669
RA FLGYPSGYKGYKLLDL ++TI+ISRNV+F+E P
Sbjct: 776 RARTCAFLGYPSGYKGYKLLDLESHTIFISRNVVFYEDLFPFKTKPAENEESSVFFPHIY 835
Query: 1668 XXXXXXXXXXXXXXXXPHSTPLT---RSGRPLRPPSYLNDYVCSSI-SPVRYSLSQFLSY 1501
++ + ++ R RPP+YL DY C+S+ S + +S+ LSY
Sbjct: 836 VDRNDSHPSQPLPVQETSASNVPAEKQNSRVSRPPAYLKDYHCNSVTSSTDHPISEVLSY 895
Query: 1500 DHLSSSHRAFTLALTTVTEPKSYKEAVLHPEWQQAMQLELDALEDNNTWQLTSLPPGKHP 1321
LS + F A+ + EP +Y +A EW AM +E+ ALEDN TW + SLP GK
Sbjct: 896 SSLSDPYMIFINAVNKIPEPHTYAQARQIKEWCDAMGMEITALEDNGTWVVCSLPVGKKA 955
Query: 1320 VGCKWVYRIKYHADGRIERYKARLVAKGYTQQEGVDYFDTFSPVAKLATVKLVLAIAAVR 1141
VGCKWVY+IK +ADG +ERYKARLVAKGYTQ EG+DY DTFSPVAKL TVKL++A+AA +
Sbjct: 956 VGCKWVYKIKLNADGSLERYKARLVAKGYTQTEGLDYVDTFSPVAKLTTVKLLIAVAAAK 1015
Query: 1140 CWHLIQMDVTNAFLYGDLHEDVYMSLPPGYQPKGELSITSNTVCKLQKSLYGLKQASRQW 961
W L Q+D++NAFL G L E++YM+LPPGY P+ S N VC+L+KSLYGLKQASRQW
Sbjct: 1016 GWSLSQLDISNAFLNGSLDEEIYMTLPPGYSPRQGDSFPPNAVCRLKKSLYGLKQASRQW 1075
Query: 960 FAKFFGALLAYGFQQCPGDHSLFTLVQGSSFLALLVYVDDIVIGGNDLAAIDALKHFLST 781
+ KF +L A GF Q GDH+LFT +S++A+LVYVDDI+I + + L+ L
Sbjct: 1076 YLKFSESLKALGFTQSSGDHTLFTRKSKNSYMAVLVYVDDIIIASSCDRETELLRDALQR 1135
Query: 780 QFKLKDLGVLKYFLGFEVARNLKGLSMCQRKYTLDLLDEAGLLGCKPRSTPVEYNSKLSK 601
KL+DLG L+YFLG E+ARN G+S+CQRKYTL+LL E GLLGCK S P+E N KLS+
Sbjct: 1136 SSKLRDLGTLRYFLGLEIARNTDGISICQRKYTLELLAETGLLGCKSSSVPMEPNQKLSQ 1195
Query: 600 DSGTLLADPAPYRRLVGRLLYLTVTRPDITFVVHYLSQFVAVP 472
+ G L+ D YR+LVG+L+YLT TRPDIT+ VH L QF + P
Sbjct: 1196 EDGELIDDAEHYRKLVGKLMYLTFTRPDITYAVHRLCQFTSAP 1238
Score = 107 bits (268), Expect(2) = 2e-22
Identities = 48/89 (53%), Positives = 67/89 (75%)
Frame = -1
Query: 469 TGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQPAP 290
TG+CMFLG+SL+ WKSKKQ +S SSAEAEY++++ A +++WL +L+ I + +
Sbjct: 1290 TGYCMFLGTSLVAWKSKKQEVISMSSAEAEYKAMSMAVREMMWLRFLLEDLWIDVSEASV 1349
Query: 289 LFCDNQVALYITSNPVFHERTKHIEIDCH 203
L+CDN A++I +NPVFHERTKHIE D H
Sbjct: 1350 LYCDNTAAIHIANNPVFHERTKHIERDYH 1378
Score = 28.5 bits (62), Expect(2) = 2e-22
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -3
Query: 200 DKYRAGLIKPLHVRSSCQLADILTKALSPCLFRAI 96
+K GLI+ LHVR+ QLADI K+ +FR++
Sbjct: 1382 EKIILGLIRTLHVRTENQLADIPYKS---SIFRSV 1413
>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1316
Score = 644 bits (1662), Expect = 0.0
Identities = 336/658 (51%), Positives = 430/658 (65%), Gaps = 16/658 (2%)
Frame = -2
Query: 2388 DVWGPFSHPTIEGFKYFLTIVDDCTRFTWTYLLRLKSEVTSILPSFFTLNRTQFGVSIKN 2209
D+WGP S ++ G KYFLTIVDD TRFTW +L++ KSE + +F TQF +K
Sbjct: 472 DIWGPCSVTSMHGHKYFLTIVDDHTRFTWLFLMQNKSETRQHIINFINQVETQFDKHVKV 531
Query: 2208 VRTDNAPEFALTQFFADSGIHHQLSCVECPQQNARVKRKHQHLLNVARALLFQSNIPLVY 2029
+RTDN EF++TQ+F+ GI HQ +CVE PQQN V+RKHQHLLNV R+LLFQ+N+P ++
Sbjct: 532 IRTDNGLEFSMTQYFSSKGIIHQTTCVETPQQNGIVERKHQHLLNVTRSLLFQANLPSIF 591
Query: 2028 WGDCILTSTYLINRLPTPLLHSKSPFECLFLRPPTYEHLKVFGCLAYGSTLLRGRTKFSP 1849
W ++ +T+LIN +PTP LH+ SPFE L+ P L VFGCL Y ST+ RTK P
Sbjct: 592 WCFALMHATFLINCIPTPFLHNISPFEKLYGHPCDISILCVFGCLCYSSTITSHRTKLDP 651
Query: 1848 RACKSVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHEH-----TXXXXXXXXXXXXXXXX 1684
RA +FLG+ KGY L +L T+ + +SRNV+FHE T
Sbjct: 652 RAHPCIFLGFKPHTKGYLLFNLHTHGLLVSRNVLFHEDHFPSFTKPHSPSFSSPVPIHYN 711
Query: 1683 XPD-TVXXXXXXXXXXXXXXXXPHSTP--LTRSGRPLRPPSYLNDY--------VCSSIS 1537
D HS+P L RS RP RPP+YL D+ S +
Sbjct: 712 YVDYPTFPSSSIVESSDPPTSDQHSSPPPLRRSTRPRRPPTYLQDFHGAFTSTSTAHSST 771
Query: 1536 PVRYSLSQFLSYDHLSSSHRAFTLALTTVTEPKSYKEAVLHPEWQQAMQLELDALEDNNT 1357
+R+ L FLSYD LS S + ++++VTEPK++ EA W +AM E+ ALE NNT
Sbjct: 772 GIRHPLHSFLSYDLLSPSFHHYVFSISSVTEPKNFAEASKSDSWLKAMHEEIFALEANNT 831
Query: 1356 WQLTSLPPGKHPVGCKWVYRIKYHADGRIERYKARLVAKGYTQQEGVDYFDTFSPVAKLA 1177
W LT+LPP K +GC+WVY++K+ ADG I+RYKARLVAKGYTQ EG+D+FDTFSPVAKL
Sbjct: 832 WVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLT 891
Query: 1176 TVKLVLAIAAVRCWHLIQMDVTNAFLYGDLHEDVYMSLPPGYQPKGELSITSNTVCKLQK 997
TV+L+L++AA+ WHL Q+DV NAFL+GDL+E+VYM LPPG P VC+LQ+
Sbjct: 892 TVRLLLSLAAINNWHLKQLDVNNAFLHGDLNEEVYMQLPPGLTPS-----FPGQVCRLQR 946
Query: 996 SLYGLKQASRQWFAKFFGALLAYGFQQCPGDHSLFTLVQGSSFLALLVYVDDIVIGGNDL 817
SLYGLKQASRQW+A+ L+ +G+ P DHSLF ++ A+L+YVDDIV+ GNDL
Sbjct: 947 SLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLFLKCSPATTTAILIYVDDIVLAGNDL 1006
Query: 816 AAIDALKHFLSTQFKLKDLGVLKYFLGFEVARNLKGLSMCQRKYTLDLLDEAGLLGCKPR 637
I L L T F++KDLG LKYFLG EVARN G+ +CQRKY LDLL + G+L KP
Sbjct: 1007 TEIHHLTSLLHTTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKYILDLLSDTGMLASKPV 1066
Query: 636 STPVEYNSKLSKDSGTLLADPAPYRRLVGRLLYLTVTRPDITFVVHYLSQFVAVPSQA 463
STP++Y+ LS SGT L D A YRRLVGRL+YLT TRPDIT+ V LSQFV+ P+ A
Sbjct: 1067 STPMDYSMHLSASSGTPLTDTAAYRRLVGRLIYLTNTRPDITYAVQQLSQFVSNPTTA 1124
Score = 129 bits (325), Expect(2) = 7e-35
Identities = 62/93 (66%), Positives = 72/93 (77%)
Frame = -1
Query: 478 RSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQ 299
RSITG ++LG SLI WKSKKQ TVSRSS+EAEYR+LA TC++ WL +L F I
Sbjct: 1170 RSITGFAVYLGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDPIS 1229
Query: 298 PAPLFCDNQVALYITSNPVFHERTKHIEIDCHL 200
P+ L+CDNQ AL I SNPVFHERTKHIEIDCH+
Sbjct: 1230 PSILYCDNQSALQIASNPVFHERTKHIEIDCHI 1262
Score = 48.5 bits (114), Expect(2) = 7e-35
Identities = 28/51 (54%), Positives = 33/51 (64%)
Frame = -3
Query: 200 DKYRAGLIKPLHVRSSCQLADILTKALSPCLFRAIVVKMGLRNIFLPS*GG 48
DK GL+K L V SS QLADILTK LSP +FR+ K+G+ NI GG
Sbjct: 1265 DKVSTGLLKLLPVSSSQQLADILTKPLSPFVFRSHCSKLGMLNIHSQLEGG 1315
>gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1013
Score = 629 bits (1623), Expect = 0.0
Identities = 328/668 (49%), Positives = 423/668 (63%), Gaps = 29/668 (4%)
Frame = -2
Query: 2388 DVWGPFSHPTIEGFKYFLTIVDDCTRFTWTYLLRLKSEVTSILPSFFTLNRTQFGVSIKN 2209
D+WGP+S P++ G KYFLT+VDD +RFTW +++ KSE L +F + TQF +K
Sbjct: 150 DIWGPYSIPSVFGHKYFLTLVDDFSRFTWIVMMKSKSETRQHLTNFISYIETQFQTKLKC 209
Query: 2208 VRTDNAPEFALTQFFADSGIHHQLSCVECPQQNARVKRKHQHLLNVARALLFQSNIPLVY 2029
+RTDN EF + F GI HQ SCVE PQQN V+RKHQH+LN ARAL FQ+++P +
Sbjct: 210 LRTDNGSEFLMHDLFLSKGIIHQGSCVETPQQNGVVERKHQHILNTARALYFQASLPKNF 269
Query: 2028 WGDCILTSTYLINRLPTPLLHSKSPFECLFLRPPTYEHLKVFGCLAYGSTLLRGRTKFSP 1849
W I + +LINR+P+PLL +K+P++ L RPP HL+ FGCLAY STL RTKF P
Sbjct: 270 WNFAIQHAVHLINRIPSPLLDNKTPYQALHQRPPILVHLRSFGCLAYASTLQAHRTKFQP 329
Query: 1848 RACKSVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHEHTXXXXXXXXXXXXXXXXXPDTV 1669
RA KSV LGY G KGY L DL ++ ++SRNV FHE T P T+
Sbjct: 330 RAKKSVLLGYKEGVKGYLLYDLHSHEFFMSRNVFFHEFTFPFHTPSQTSLTQPSPTPITI 389
Query: 1668 XXXXXXXXXXXXXXXXPHST------------------PLTRSGRPLRPPSYLNDYVCSS 1543
++ P S R +PPSYL DY CS
Sbjct: 390 QTPISSPYDLDNHVPPSPTSSTSIPPEQPHQPLSPAPAPSRHSTRMRQPPSYLKDYHCSL 449
Query: 1542 ISPVR-----------YSLSQFLSYDHLSSSHRAFTLALTTVTEPKSYKEAVLHPEWQQA 1396
++P +S+S L+YD S S++ F L+++T EP +Y +A + W A
Sbjct: 450 LAPTGRINSFSGISTPHSISSTLTYDFCSPSYKQFCLSVSTNFEPHTYTQASKYDCWIMA 509
Query: 1395 MQLELDALEDNNTWQLTSLPPGKHPVGCKWVYRIKYHADGRIERYKARLVAKGYTQQEGV 1216
M+ EL AL+ N TW + LP GK P+GCKWVY+IKY +DG IERYKARLVAKGY+Q EG+
Sbjct: 510 MKTELAALDMNQTWSIVDLPSGKRPIGCKWVYKIKYLSDGSIERYKARLVAKGYSQTEGL 569
Query: 1215 DYFDTFSPVAKLATVKLVLAIAAVRCWHLIQMDVTNAFLYGDLHEDVYMSLPPGYQPKGE 1036
DY DT+SPVAKL TV+++LA+ A++ W L Q+DV NAFL+GDLHE+VYM+LPPG
Sbjct: 570 DYLDTYSPVAKLTTVRVLLALTAIKGWFLEQLDVNNAFLHGDLHEEVYMTLPPGLSVPSS 629
Query: 1035 LSITSNTVCKLQKSLYGLKQASRQWFAKFFGALLAYGFQQCPGDHSLFTLVQGSSFLALL 856
S T+ VCKL KS+YGLKQASRQW++K AL++ G+ DHSLF S F ALL
Sbjct: 630 -SNTAPKVCKLHKSIYGLKQASRQWYSKLSSALISMGYSPSTADHSLFIKSSSSHFTALL 688
Query: 855 VYVDDIVIGGNDLAAIDALKHFLSTQFKLKDLGVLKYFLGFEVARNLKGLSMCQRKYTLD 676
VYVDDI++ GND ID +K L FK+KDLG L+YFLG E+AR+ KG+ + QRKYTL+
Sbjct: 689 VYVDDIILAGNDKPEIDFIKAQLHKCFKIKDLGNLRYFLGLEIARSNKGILLNQRKYTLE 748
Query: 675 LLDEAGLLGCKPRSTPVEYNSKLSKDSGTLLADPAPYRRLVGRLLYLTVTRPDITFVVHY 496
+L++ G L KP STP + KL D G+ D YRRL+GRLLYLT TRPDI++VV
Sbjct: 749 ILEDVGFLAAKPSSTPFNPSLKLHSDHGSPYNDETAYRRLIGRLLYLTTTRPDISYVVQQ 808
Query: 495 LSQFVAVP 472
LSQFV+ P
Sbjct: 809 LSQFVSKP 816
Score = 127 bits (318), Expect(2) = 2e-30
Identities = 57/97 (58%), Positives = 75/97 (77%)
Frame = -1
Query: 490 SICCRSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRI 311
SI +SITG C+FLGSSLI W+SKKQ+T+SRSS+EAEYR+LA+ TC++ WL + + +
Sbjct: 861 SISRKSITGFCVFLGSSLISWRSKKQSTISRSSSEAEYRALASLTCELQWLHYLFNDLKT 920
Query: 310 PHPQPAPLFCDNQVALYITSNPVFHERTKHIEIDCHL 200
P +FCDN+ A+Y+ NP FHERTKHIEIDCH+
Sbjct: 921 SLNFPTSVFCDNKSAIYLAHNPTFHERTKHIEIDCHV 957
Score = 36.6 bits (83), Expect(2) = 2e-30
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = -3
Query: 200 DKYRAGLIKPLHVRSSCQLADILTKALSPCLFRAIVVKMGLRNIFLPS*GGVL 42
+K ++ L+ L V SS QLAD TK L F + V K+GL ++ + GG+L
Sbjct: 960 EKIQSRLLHLLPVPSSSQLADAFTKPLHATSFNSFVSKLGLYDVHSSACGGLL 1012
>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
Length = 1125
Score = 628 bits (1619), Expect = 0.0
Identities = 331/658 (50%), Positives = 427/658 (64%), Gaps = 18/658 (2%)
Frame = -2
Query: 2391 CDVWGPFSHPTIEGFKYFLTIVDDCTRFTWTYLLRLKSEVTSILPSFFTLNRTQFGVSIK 2212
CD+WGP+ ++ G KYFLTIVDD +RFT + + KSE +L +FF+ +TQF VSI
Sbjct: 312 CDIWGPYKIASLSGAKYFLTIVDDYSRFTXVFFMHHKSETQHLLVNFFSFVQTQFHVSIA 371
Query: 2211 NVRTDNAPEF-ALTQFFADSGIHHQLSCVECPQQNARVKRKHQHLLNVARALLFQSNIPL 2035
N+R DN EF + +FF G +Q SCV PQQN V+RKH+H+L ARA FQ+++PL
Sbjct: 372 NIRVDNGGEFFSXREFFKQKGTTYQHSCVYTPQQNGVVERKHRHILESARAFXFQAHLPL 431
Query: 2034 VYWGDCILTSTYLINRLPTPLLHSKSPFECLFLRPPTYEHLKVFGCLAYGSTLLRGRTKF 1855
+W +C+ T+ ++INRLPTPLL ++PFE L+ + P+Y H++VFGCLAY +T + KF
Sbjct: 432 PFWAECVSTAVHIINRLPTPLLSRQTPFERLYGKLPSYSHIRVFGCLAY-ATNVHVPHKF 490
Query: 1854 SPRACKSVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHEHTXXXXXXXXXXXXXXXXXPD 1675
+PRA + +FLGYP G K YKL DL T+ ++ SR+V+FHE +
Sbjct: 491 APRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHE---------------TIFPYE 535
Query: 1674 TVXXXXXXXXXXXXXXXXPHSTP---LTRSGRPLRPPSYLNDYVCSSISP---------- 1534
++ P L RS RP PP L DYVC+ ++
Sbjct: 536 SIPSPSSNSDPFLLSHHLASPPPEPILRRSQRPHHPPMALRDYVCNQVTSPNHLPPLSSS 595
Query: 1533 ----VRYSLSQFLSYDHLSSSHRAFTLALTTVTEPKSYKEAVLHPEWQQAMQLELDALED 1366
RY L F+SY S HR+FT A++ EP SY EA H WQ+AMQ EL LE
Sbjct: 596 PQKGTRYPLCNFVSYHRYSPQHRSFTAAVSQDIEPTSYAEATSHSHWQEAMQSELATLEA 655
Query: 1365 NNTWQLTSLPPGKHPVGCKWVYRIKYHADGRIERYKARLVAKGYTQQEGVDYFDTFSPVA 1186
N+TW LTSLPPGK P+GC+WVY+IK H+DG IER+KARLVAKGYTQ EG+DY DTFSP A
Sbjct: 656 NHTWSLTSLPPGKKPIGCRWVYKIKXHSDGTIERFKARLVAKGYTQLEGIDYHDTFSPTA 715
Query: 1185 KLATVKLVLAIAAVRCWHLIQMDVTNAFLYGDLHEDVYMSLPPGYQPKGELSITSNTVCK 1006
K+ V+ +LA+AA + W L Q+ D +MS PP + +GE N VC
Sbjct: 716 KMIXVRCLLALAAAQNWSLHQL-------------DKFMSPPPSLRRQGE-----NLVCH 757
Query: 1005 LQKSLYGLKQASRQWFAKFFGALLAYGFQQCPGDHSLFTLVQGSSFLALLVYVDDIVIGG 826
L KSLYGLKQASRQWFAKF A+ A GF Q D+SLFT +G SF ALL+YVDDI+I G
Sbjct: 758 LHKSLYGLKQASRQWFAKFSTAIQAVGFIQSKADYSLFTCRKGKSFTALLIYVDDILITG 817
Query: 825 NDLAAIDALKHFLSTQFKLKDLGVLKYFLGFEVARNLKGLSMCQRKYTLDLLDEAGLLGC 646
ND+ AI ALK FL + F++KDLG LKYFLG EV+R+ KG+S+ QRKYTL++L + G LG
Sbjct: 818 NDVNAIVALKQFLHSHFRIKDLGDLKYFLGIEVSRSKKGISISQRKYTLEILKDGGFLGA 877
Query: 645 KPRSTPVEYNSKLSKDSGTLLADPAPYRRLVGRLLYLTVTRPDITFVVHYLSQFVAVP 472
KP + P+E N+KLS DSG LL P+ YRRLVGRL+YLT+TRPDIT+ VH LS+F+ P
Sbjct: 878 KPVNFPMEQNTKLS-DSGELLKGPSQYRRLVGRLIYLTITRPDITYSVHVLSRFMHAP 934
Score = 130 bits (328), Expect(2) = 9e-31
Identities = 58/92 (63%), Positives = 73/92 (79%)
Frame = -1
Query: 478 RSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQ 299
RS TG+C+FLGSSLI W++K+Q TVS SS EAEYR++A C++ WL S+L RI HP+
Sbjct: 983 RSXTGYCVFLGSSLISWRTKRQKTVSLSSXEAEYRAMAGTCCELSWLRSLLKDLRILHPK 1042
Query: 298 PAPLFCDNQVALYITSNPVFHERTKHIEIDCH 203
PA L+CDN AL+I NPVFHERT+HIE+DCH
Sbjct: 1043 PALLYCDNTAALHIAVNPVFHERTRHIEMDCH 1074
Score = 33.5 bits (75), Expect(2) = 9e-31
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -3
Query: 200 DKYRAGLIKPLHVRSSCQLADILTKALSPCLFRAIVVKMGLRNIFLPS 57
DK + G + H+ S+ Q AD+ TK L F ++ K+G+ +I P+
Sbjct: 1078 DKIQDGSVVTKHIASTDQXADVFTKPLGKETFSTMIHKLGVLDIHSPT 1125
>gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1136
Score = 619 bits (1596), Expect = 0.0
Identities = 324/657 (49%), Positives = 423/657 (64%), Gaps = 15/657 (2%)
Frame = -2
Query: 2388 DVWGPFSHPTIEGFKYFLTIVDDCTRFTWTYLLRLKSEVTSILPSFFTLNRTQFGVSIKN 2209
D+WGP ++ G KYFL IVDD TRFTW +L++ KSE + +F TQF ++K
Sbjct: 293 DIWGPCPVTSMHGHKYFLAIVDDHTRFTWLFLMQNKSETRQHIINFINQVETQFDKNVKV 352
Query: 2208 VRTDNAPEFALTQFFADSGIHHQLSCVECPQQNARVKRKHQHLLNVARALLFQSNIPLVY 2029
+RTDN EF++TQ+F+ GI HQ +CVE PQQN V+RKHQHLLNV R+LLFQ+N+P ++
Sbjct: 353 IRTDNGLEFSMTQYFSSKGIIHQTTCVETPQQNGIVERKHQHLLNVTRSLLFQANLPSIF 412
Query: 2028 WGDCILTSTYLINRLPTPLLHSKSPFECLFLRPPTYEHLKVFGCLAYGSTLLRGRTKFSP 1849
W + + +LIN +PTP LH+ SPFE L+ P L+VFGCL Y S + RTK P
Sbjct: 413 WCFALKHAAFLINCIPTPFLHNISPFEKLYGHPCDISILRVFGCLCYSSIITSHRTKLDP 472
Query: 1848 RACKSVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHEH-----TXXXXXXXXXXXXXXXX 1684
RA +FLG+ KGY L++L T+ + +S+NVIFHE T
Sbjct: 473 RAHPCIFLGFKPHTKGYLLVNLHTHGLLVSQNVIFHEDHFPSFTKPNSPSFSSPVPIPYN 532
Query: 1683 XPD-TVXXXXXXXXXXXXXXXXPHSTP--LTRSGRPLRPPSYLNDY--VCSSISP----- 1534
D HS+P L RS RP RPP+YL D+ +S P
Sbjct: 533 YADYPSFPSSSIVESSEPPPPDQHSSPPPLRRSTRPRRPPTYLQDFHGAFTSTGPHSSTG 592
Query: 1533 VRYSLSQFLSYDHLSSSHRAFTLALTTVTEPKSYKEAVLHPEWQQAMQLELDALEDNNTW 1354
+R+ L F+SYD LS S + ++++VT+PK++ EA W +AM E+ ALE NNTW
Sbjct: 593 IRHPLHSFISYDRLSPSFHHYVFSISSVTKPKNFVEASKSDSWLKAMHEEISALEANNTW 652
Query: 1353 QLTSLPPGKHPVGCKWVYRIKYHADGRIERYKARLVAKGYTQQEGVDYFDTFSPVAKLAT 1174
LT+LPP K +GC+WVY++K+ ADG I+RYKARLVAKGYTQ EG+D+FDTFSPVAKL T
Sbjct: 653 VLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTT 712
Query: 1173 VKLVLAIAAVRCWHLIQMDVTNAFLYGDLHEDVYMSLPPGYQPKGELSITSNTVCKLQKS 994
V+L++++AA+ HL Q+DV N+FL+GDL+E+VYM LPPG P VC+LQ+S
Sbjct: 713 VRLLISLAAIHNCHLKQLDVNNSFLHGDLNEEVYMQLPPGITPS-----FPGQVCRLQRS 767
Query: 993 LYGLKQASRQWFAKFFGALLAYGFQQCPGDHSLFTLVQGSSFLALLVYVDDIVIGGNDLA 814
LYGLKQASRQW+A+ L+ +G+ P DHSLF + A+L+YVDDIV+ GNDL
Sbjct: 768 LYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLFLKCSPAITTAILIYVDDIVLAGNDLT 827
Query: 813 AIDALKHFLSTQFKLKDLGVLKYFLGFEVARNLKGLSMCQRKYTLDLLDEAGLLGCKPRS 634
I L L F++KDLG LKYFLG EVARN G+ +CQRKYTLDLL + G+L KP S
Sbjct: 828 EIHHLTSLLHNTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKYTLDLLSDTGMLASKPVS 887
Query: 633 TPVEYNSKLSKDSGTLLADPAPYRRLVGRLLYLTVTRPDITFVVHYLSQFVAVPSQA 463
TP++Y++ LS SGT D A YRRLVGRL+YL TRP I + V LSQFV+ P A
Sbjct: 888 TPMDYSTHLSASSGTPFTDTAAYRRLVGRLIYLPNTRPAIAYAVQQLSQFVSNPPTA 944
Score = 130 bits (327), Expect = 2e-27
Identities = 63/115 (54%), Positives = 84/115 (73%)
Frame = -1
Query: 478 RSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQ 299
RSITG ++LG SLI WKSKKQ TVSRSS+EAEYR+LA TC++ WL +L F I +
Sbjct: 990 RSITGFAVYLGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDLIR 1049
Query: 298 PAPLFCDNQVALYITSNPVFHERTKHIEIDCHLTNIGLASSNLCMFVLLANLLIS 134
P+ L+CDNQ AL I SNP+FHERTKHIEIDCH+ +++ L + + ++L ++
Sbjct: 1050 PSILYCDNQFALQIASNPIFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSLQLA 1104
>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
Length = 1243
Score = 592 bits (1527), Expect = 0.0
Identities = 324/656 (49%), Positives = 404/656 (61%), Gaps = 17/656 (2%)
Frame = -2
Query: 2388 DVWGPFSHPTIEGFKYFLTIVDDCTRFTWTYLLRLKSEVTSILPSFFTLNRTQFGVSIKN 2209
D+WGPFS ++EG+K+FLTIVDD +R TW Y+L+ KSEV +P FF + QFG +K
Sbjct: 475 DIWGPFSVGSVEGYKFFLTIVDDYSRVTWVYMLKNKSEVQKYIPDFFAFVKKQFGKEVKA 534
Query: 2208 VRTDNAPEFALTQFFADSGIHHQLSCVECPQQNARVKRKHQHLLNVARALLFQSNIPLVY 2029
+R+DNAPE L+ F+ G +++
Sbjct: 535 IRSDNAPELFLSNFYHSLG--------------------------------------VIH 556
Query: 2028 WGDCILTSTYLINRLPTPLLHSKSPFECLFLRPPTYEHLKVFGCLAYGSTLLRGRTKFSP 1849
+ C+ TP +S P Y HL+VFGCL Y STL RTKFSP
Sbjct: 557 YRSCV----------ETPQQNSVLP---------DYSHLRVFGCLCYVSTLKANRTKFSP 597
Query: 1848 RACKSVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHEHTXXXXXXXXXXXXXXXXXP--D 1675
RA +VFLGYP G+KGYKLLD+ T +I ISRNVIFHE D
Sbjct: 598 RAKAAVFLGYPFGFKGYKLLDIETRSISISRNVIFHEEIFPFSKTNPCSSPDISSDLFHD 657
Query: 1674 TVXXXXXXXXXXXXXXXXP-------HSTPLTRSGRPLRPPSYLNDYVCSSISPVRY--- 1525
V P +R R + PSYL DY CS I+ V +
Sbjct: 658 RVLPCIAADNDQSSSVLPRVVSQPPLQVAPSSRXTRVSKQPSYLKDYHCSLINSVAHVET 717
Query: 1524 -----SLSQFLSYDHLSSSHRAFTLALTTVTEPKSYKEAVLHPEWQQAMQLELDALEDNN 1360
+ FLSYD LS S++ F+L+++ ++EP S+ +A PEW+ AM EL+ALE+N
Sbjct: 718 HSTSHPIQHFLSYDKLSPSYKLFSLSVSIISEPSSFAKAAEIPEWRAAMDCELEALEENK 777
Query: 1359 TWQLTSLPPGKHPVGCKWVYRIKYHADGRIERYKARLVAKGYTQQEGVDYFDTFSPVAKL 1180
TW + SL GKHPVGCKWVY+IK+ ADG IERYKARLVAKGYTQ+EG+DY DTFSPVAKL
Sbjct: 778 TWSIVSLXVGKHPVGCKWVYKIKHKADGTIERYKARLVAKGYTQREGIDYVDTFSPVAKL 837
Query: 1179 ATVKLVLAIAAVRCWHLIQMDVTNAFLYGDLHEDVYMSLPPGYQPKGELSITSNTVCKLQ 1000
TVKL+LAIAAV+ WHL Q+DV NAFL+GDL+E+VYM LPPGY KGE S+ SN VC L
Sbjct: 838 VTVKLLLAIAAVKGWHLSQLDVNNAFLHGDLNEEVYMKLPPGYNRKGE-SLPSNAVCLLH 896
Query: 999 KSLYGLKQASRQWFAKFFGALLAYGFQQCPGDHSLFTLVQGSSFLALLVYVDDIVIGGND 820
KSLYGLKQASRQWF+KF A++ GF Q P DHSLF F+ALLVYVDD++I N+
Sbjct: 897 KSLYGLKQASRQWFSKFSTAIMGLGFSQSPSDHSLFIKNVDGLFIALLVYVDDVIIASNN 956
Query: 819 LAAIDALKHFLSTQFKLKDLGVLKYFLGFEVARNLKGLSMCQRKYTLDLLDEAGLLGCKP 640
AI LK L+ FKLKDLG +KYFLG E+A++ G+ + QRKY LDLL + G LGCK
Sbjct: 957 QGAIADLKSELNKLFKLKDLGDVKYFLGLEIAKSSTGICVSQRKYVLDLLSDFGYLGCKA 1016
Query: 639 RSTPVEYNSKLSKDSGTLLADPAPYRRLVGRLLYLTVTRPDITFVVHYLSQFVAVP 472
STP+E N KLS D G L D + YRRL+G+LLYLT+TRPDI++VV LSQF++ P
Sbjct: 1017 ASTPMEANVKLSMDEGVDLPDVSLYRRLLGKLLYLTLTRPDISYVVGRLSQFISRP 1072
Score = 106 bits (264), Expect(2) = 7e-31
Identities = 52/93 (55%), Positives = 63/93 (67%)
Frame = -1
Query: 478 RSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQ 299
RS+TG C+FLG+SL+ WKSKKQ+ VSRSSAEAEYR++A +C+I WLL++L F
Sbjct: 1121 RSVTGFCVFLGNSLVSWKSKKQHIVSRSSAEAEYRAMANTSCEITWLLALLKDF------ 1174
Query: 298 PAPLFCDNQVALYITSNPVFHERTKHIEIDCHL 200
NPVFHERTKHIEIDCHL
Sbjct: 1175 --------------AENPVFHERTKHIEIDCHL 1193
Score = 58.5 bits (140), Expect(2) = 7e-31
Identities = 27/48 (56%), Positives = 37/48 (77%)
Frame = -3
Query: 200 DKYRAGLIKPLHVRSSCQLADILTKALSPCLFRAIVVKMGLRNIFLPS 57
DK ++G++KPL V + QLAD+LTKAL P F+ ++ KMGL+NIF PS
Sbjct: 1196 DKVQSGVLKPLFVSTEHQLADVLTKALHPSSFKLLIGKMGLKNIFSPS 1243
>emb|CAN80547.1| hypothetical protein VITISV_010898 [Vitis vinifera]
Length = 1181
Score = 504 bits (1297), Expect(3) = e-173
Identities = 283/666 (42%), Positives = 386/666 (57%), Gaps = 27/666 (4%)
Frame = -2
Query: 2388 DVWGPFSHPTIEGFKYFLTIVDDCTRFTWTYLLRLKSEVTSILPSFFTLNRTQFGVSIKN 2209
DVWGP + GF+YF+T +DD +R TW +L++ ++E+ SI F+T +TQF +SI+
Sbjct: 358 DVWGPCRTASTLGFQYFVTFIDDYSRCTWLFLMKNRAELFSIFQKFYTEIQTQFNISIRV 417
Query: 2208 VRTDNAPEF---ALTQFFADSGIHHQLSCVECPQQNARVKRKHQHLLNVARALLFQSNIP 2038
+R+DNA E+ T F + GI HQ SC PQQN +RK++HL+ AR LL S++P
Sbjct: 418 LRSDNAREYFSAQFTSFMSHHGILHQSSCAHTPQQNGVAERKNRHLVETARTLLLHSHVP 477
Query: 2037 LVYWGDCILTSTYLINRLPTPLLHSKSPFECLFLRPPTY-EHLKVFGCLAYGSTLLRGRT 1861
+WGD +LT+ YLINR+P+ +LH + P LF P Y +VFGC + L G+
Sbjct: 478 FRFWGDAVLTACYLINRMPSSVLHDQIPHSLLFPDQPLYFLPPRVFGCTCFVHILTPGQD 537
Query: 1860 KFSPRACKSVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHEHTXXXXXXXXXXXXXXXXX 1681
K S +A K +FLGY KGY+ L T+ +IS +V F E +
Sbjct: 538 KLSAKAMKCLFLGYSRLQKGYRCYSLETHRYFISADVTFFEDSPFFSTTSESLPVSEVLP 597
Query: 1680 PDTVXXXXXXXXXXXXXXXXPHSTPLTRSGRPLRPPSYLNDYVCSSISP----------- 1534
V H P + P P + + S SP
Sbjct: 598 IPIV---SPPDVMPPRPLQVYHRRPRVVAPLPF-PEAPADSLPIPSASPAPALPSPNDLP 653
Query: 1533 ------VRYSLSQFLSYDHLS-----SSHRAFTLALTTVTEPKSYKEAVLHPEWQQAMQL 1387
R + + Y+ LS S + AF A+++V+ PKS EA+ HP W+QAM
Sbjct: 654 IAVRKGTRSTRNPHPIYNFLSYHRLSSPYSAFVSAISSVSLPKSTHEALSHPGWRQAMVD 713
Query: 1386 ELDALEDNNTWQLTSLPPGKHPVGCKWVYRIKYHADGRIERYKARLVAKGYTQQEGVDYF 1207
E+ AL N TW L LP GK VGC+WVY +K +G+++R KARLVAKGYTQ G DY
Sbjct: 714 EMAALHSNGTWDLVVLPSGKSTVGCRWVYAVKVGPEGQVDRLKARLVAKGYTQVYGSDYG 773
Query: 1206 DTFSPVAKLATVKLVLAIAAVRCWHLIQMDVTNAFLYGDLHEDVYMSLPPGYQPKGELSI 1027
DTFSPVAK+A+V+L+L++AA+ W L Q+D+ N FL+GDL E+VYM PPG+ GE
Sbjct: 774 DTFSPVAKIASVRLLLSMAAMCSWPLYQLDIKNVFLHGDLAEEVYMEQPPGFVAPGE--- 830
Query: 1026 TSNTVCKLQKSLYGLKQASRQWFAKFFGALLAYGFQQCPGDHSLFTLVQG-SSFLALLVY 850
S VC+L++SLYGLKQ+ R WF++F + +G + DHS+F + L+VY
Sbjct: 831 -SGLVCRLRRSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVY 889
Query: 849 VDDIVIGGNDLAAIDALKHFLSTQFKLKDLGVLKYFLGFEVARNLKGLSMCQRKYTLDLL 670
VDDIVI G+D I LK L T F+ KDLG LKYFLG E+A++ G+ + QRKY LD+L
Sbjct: 890 VDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDIL 949
Query: 669 DEAGLLGCKPRSTPVEYNSKLSKDSGTLLADPAPYRRLVGRLLYLTVTRPDITFVVHYLS 490
+E G+L CKP TP++ N KL G L DP YRRLVG+L YLT+TRPDI+F V +S
Sbjct: 950 EETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVS 1009
Query: 489 QFVAVP 472
QF+ P
Sbjct: 1010 QFLQSP 1015
Score = 132 bits (331), Expect(3) = e-173
Identities = 60/107 (56%), Positives = 79/107 (73%)
Frame = -1
Query: 499 LFESICCRSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDT 320
L+E+ RS +G+C+F+G +LI WKSKKQ+ V+RSSAEAEYR++A ATC+++WL +L
Sbjct: 1039 LYENRDRRSTSGYCVFIGGNLISWKSKKQDVVARSSAEAEYRAMALATCELIWLRHLLQE 1098
Query: 319 FRIPHPQPAPLFCDNQVALYITSNPVFHERTKHIEIDCHLTNIGLAS 179
R + L CDNQ AL+I SNPVFHERTKHIE+DCH +AS
Sbjct: 1099 LRFGKDEQMKLICDNQAALHIASNPVFHERTKHIEVDCHFIREKIAS 1145
Score = 27.3 bits (59), Expect(3) = e-173
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 200 DKYRAGLIKPLHVRSSCQLADILTKALSPCLFRAIVVKMG 81
+K +G I V S+ QLADI TK+L + I K+G
Sbjct: 1141 EKIASGCIATSFVNSNDQLADIFTKSLRGPRIKYICNKLG 1180
>emb|CAN75900.1| hypothetical protein VITISV_033582 [Vitis vinifera]
Length = 1041
Score = 509 bits (1311), Expect(3) = e-173
Identities = 281/646 (43%), Positives = 383/646 (59%), Gaps = 7/646 (1%)
Frame = -2
Query: 2388 DVWGPFSHPTIEGFKYFLTIVDDCTRFTWTYLLRLKSEVTSILPSFFTLNRTQFGVSIKN 2209
DVWGP + GF+YF+T +DD +R TW +L++ ++E+ SI F+ +TQF +SI+
Sbjct: 230 DVWGPCRTASTLGFQYFVTFIDDYSRCTWLFLMKNRAELFSIFQKFYAEIQTQFNISIRV 289
Query: 2208 VRTDNAPEF---ALTQFFADSGIHHQLSCVECPQQNARVKRKHQHLLNVARALLFQSNIP 2038
+R+DNA E T F + GI HQ SC PQQN +R ++HL+ A +L SN+P
Sbjct: 290 LRSDNARECFSAPFTSFMSHHGILHQSSCAHTPQQNGVAERNNRHLVETAXTILLHSNVP 349
Query: 2037 LVYWGDCILTSTYLINRLPTPLLHSKSPFECLFLRPPTYE-HLKVFGCLAYGSTLLRGRT 1861
+WGD +LT+ YLINR+P+ +LH + P LF P Y +VFGC + L G+
Sbjct: 350 FRFWGDAVLTACYLINRMPSSVLHDQIPHSLLFPDQPLYFLPPRVFGCTCFVHILTPGQD 409
Query: 1860 KFSPRACKSVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHEHTXXXXXXXXXXXXXXXXX 1681
K S +A K +FLGY KGY+ L T+ +IS +V F E +
Sbjct: 410 KLSAKAMKCLFLGYSRLQKGYRCYSLETHRYFISADVTFFEDSPFFSTTSESLPVXEVLP 469
Query: 1680 PDTVXXXXXXXXXXXXXXXXPHSTPLTRSGRPLR--PPSYLNDYVCSSISPVRYSLSQFL 1507
V H P + P P + S+ +P + + FL
Sbjct: 470 IPIVSPPDAMPPRPLQVY---HRRPPVVAPLPFAEAPAIAVRKGTRSTRNP--HPIYNFL 524
Query: 1506 SYDHLSSSHRAFTLALTTVTEPKSYKEAVLHPEWQQAMQLELDALEDNNTWQLTSLPPGK 1327
SY LSS + A A+++ + PKS EA+ HP W+QAM E+ AL N TW L LP GK
Sbjct: 525 SYHRLSSPYSAXVSAISSXSLPKSTHEALSHPSWRQAMVDEMAALHSNGTWDLVVLPSGK 584
Query: 1326 HPVGCKWVYRIKYHADGRIERYKARLVAKGYTQQEGVDYFDTFSPVAKLATVKLVLAIAA 1147
VGC+WVY +K DG+++R KARLVAKGYTQ G DY TFSPVAK+A+V+L+L++AA
Sbjct: 585 STVGCRWVYAVKVGPDGQVDRLKARLVAKGYTQVYGSDYGGTFSPVAKIASVRLLLSMAA 644
Query: 1146 VRCWHLIQMDVTNAFLYGDLHEDVYMSLPPGYQPKGELSITSNTVCKLQKSLYGLKQASR 967
+ W L Q+D+ NAFL+GDL E+VYM PPG+ +GE S VC+L++SLYGLKQ+ R
Sbjct: 645 MCSWPLYQLDIKNAFLHGDLAEEVYMEQPPGFVAQGE----SGLVCRLRRSLYGLKQSPR 700
Query: 966 QWFAKFFGALLAYGFQQCPGDHSLFTLVQG-SSFLALLVYVDDIVIGGNDLAAIDALKHF 790
WF++F + +G + DHS+F + L+VYVDDIVI G+D I LK
Sbjct: 701 AWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQH 760
Query: 789 LSTQFKLKDLGVLKYFLGFEVARNLKGLSMCQRKYTLDLLDEAGLLGCKPRSTPVEYNSK 610
L T F+ KDLG LKYFLG E+A++ G+ + QRKY LD+L+E G+L CKP TP++ N K
Sbjct: 761 LFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGILDCKPVDTPMDPNVK 820
Query: 609 LSKDSGTLLADPAPYRRLVGRLLYLTVTRPDITFVVHYLSQFVAVP 472
L G L DP YRRLVG+L YLT+TRPDI+F V +SQF+ P
Sbjct: 821 LVPGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSP 866
Score = 121 bits (303), Expect(3) = e-173
Identities = 53/90 (58%), Positives = 69/90 (76%)
Frame = -1
Query: 475 SITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQP 296
S +G+C+F+G +LI WKSKKQ+ V+RSSAE EYR++A ATC+++WL +L R +
Sbjct: 900 STSGYCVFIGGNLISWKSKKQDVVARSSAEXEYRAMALATCELIWLRHLLRELRFGKDEQ 959
Query: 295 APLFCDNQVALYITSNPVFHERTKHIEIDC 206
L CDNQ AL+I SNPVFHERTKHIE+DC
Sbjct: 960 MKLICDNQAALHIASNPVFHERTKHIEVDC 989
Score = 31.2 bits (69), Expect(3) = e-173
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -3
Query: 200 DKYRAGLIKPLHVRSSCQLADILTKALSPCLFRAIVVKMGLRNIFLPS 57
+K +G + V S+ QLADI TK+L + I K+G +++ P+
Sbjct: 994 EKIXSGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVYAPA 1041
>emb|CAN70756.1| hypothetical protein VITISV_014702 [Vitis vinifera]
Length = 1212
Score = 416 bits (1068), Expect(3) = e-148
Identities = 249/651 (38%), Positives = 351/651 (53%), Gaps = 24/651 (3%)
Frame = -2
Query: 2388 DVWGPFSHPTIEGFKYFLTIVDDCTRFTWTYLLRLKSEVTSILPSFFTLNRTQFGVSIKN 2209
DV GP + GF+YF+T +DD +R TW +L++ ++E+ SI F+T +TQF +SI++
Sbjct: 435 DVXGPCRTASTLGFQYFVTFIDDYSRCTWLFLMKNRAELFSIFQKFYTEIQTQFNISIRS 494
Query: 2208 VRTDNAPEFALTQFFADSGIHHQLSCVECPQQNARVKRKHQHLLNVARALLFQSNIPLVY 2029
SC PQQN AR LL S++P +
Sbjct: 495 ------------------------SCAHTPQQNG-----------TARTLLLHSHVPFRF 519
Query: 2028 WGDCILTSTYLINRLPTPLLHSKSPFECL------FLRPPT------YEHL--------- 1912
WGD +LT+ YLINR+P+ +LH + P L + PP + H+
Sbjct: 520 WGDAVLTACYLINRMPSSVLHDQIPHSLLFPDQPLYFLPPRVFGCTCFVHILTPGQDKLS 579
Query: 1911 -KVFGCLAYG-STLLRGRTKFSPRACKSVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHE 1738
K CL G S L +G +S + G + ++ ++ ++ +S +F
Sbjct: 580 AKAMKCLFLGYSRLQKGYRCYSLEXHRYFISGDVTFFEDSXFFSTTSESLPVSE--VFPI 637
Query: 1737 HTXXXXXXXXXXXXXXXXXPDTVXXXXXXXXXXXXXXXXPHSTPLTRSGRPLRPPSYLND 1558
V P ++P P P +
Sbjct: 638 PIVSPPDAMPPRPLQVYHRRPRVVAPLPFPEAPADSLPIPSASPAPTLPSPNDLPIAVRK 697
Query: 1557 YVCSSISPVRYSLSQFLSYDHLSSSHRAFTLALTTVTEPKSYKEAVLHPEWQQAMQLELD 1378
S+ +P + + FLSY LSS + AF A+++V+ PKS EA+ HP W+QAM E+
Sbjct: 698 GTRSTRNP--HPIYNFLSYHRLSSPYSAFVSAISSVSLPKSTHEALSHPGWRQAMVDEMT 755
Query: 1377 ALEDNNTWQLTSLPPGKHPVGCKWVYRIKYHADGRIERYKARLVAKGYTQQEGVDYFDTF 1198
AL N TW L LP GK +GC+WVY +K DG+++R KARLVAKGYTQ G DY DTF
Sbjct: 756 ALHSNGTWDLVVLPSGKSTIGCRWVYAVKVGPDGQVDRLKARLVAKGYTQVYGSDYGDTF 815
Query: 1197 SPVAKLATVKLVLAIAAVRCWHLIQMDVTNAFLYGDLHEDVYMSLPPGYQPKGELSITSN 1018
SPVAK+A+V+L+L++AA+ W L Q+D+ N FL+GDL E+VYM PPG+ +GE S
Sbjct: 816 SPVAKIASVRLLLSMAAMCSWPLYQLDIKNVFLHGDLAEEVYMEQPPGFVAQGE----SG 871
Query: 1017 TVCKLQKSLYGLKQASRQWFAKFFGALLAYGFQQCPGDHSLFTLVQG-SSFLALLVYVDD 841
VC+L++SLYGLKQ+ R WF++F + +G + DHS+F + L+VYVDD
Sbjct: 872 LVCRLRRSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDD 931
Query: 840 IVIGGNDLAAIDALKHFLSTQFKLKDLGVLKYFLGFEVARNLKGLSMCQRKYTLDLLDEA 661
IVI G+D I LK L T F+ KDLG LKYFLG E+A++ G+ + Q+KY LD+L+E
Sbjct: 932 IVIIGSDQDGIXKLKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQKKYALDILEET 991
Query: 660 GLLGCKPRSTPVEYNSKLSKDSGTLLADPAPYRRLVGRLLYLTVTRPDITF 508
G+L CKP TP++ N KL G L DP YRRLVG+L YLT+TRPDI+F
Sbjct: 992 GMLDCKPVDTPMDSNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITRPDISF 1042
Score = 130 bits (327), Expect(3) = e-148
Identities = 58/100 (58%), Positives = 75/100 (75%)
Frame = -1
Query: 478 RSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQ 299
RS +G+C+F+G +LI WKSKKQ+ V+RSSAEAEYR++A ATC+++WL +L R +
Sbjct: 1070 RSTSGYCVFIGGNLISWKSKKQDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGKDE 1129
Query: 298 PAPLFCDNQVALYITSNPVFHERTKHIEIDCHLTNIGLAS 179
L CDNQ AL+I SNPVFHERTKHIE+DCH +AS
Sbjct: 1130 QXKLICDNQAALHIASNPVFHERTKHIEVDCHFIREKIAS 1169
Score = 31.2 bits (69), Expect(3) = e-148
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -3
Query: 200 DKYRAGLIKPLHVRSSCQLADILTKALSPCLFRAIVVKMGLRNIFLPS 57
+K +G + V S+ QLADI TK+L + I K+G +++ P+
Sbjct: 1165 EKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVYAPA 1212
>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
11.19) [Arabidopsis thaliana]
Length = 1633
Score = 403 bits (1036), Expect(3) = e-147
Identities = 201/408 (49%), Positives = 273/408 (66%), Gaps = 25/408 (6%)
Frame = -2
Query: 1617 HSTPLTRSGRPLRPPSYLNDYVC------SSISPVR-------------------YSLSQ 1513
+S P+ R R + P+YL++Y C SS+SP Y +S
Sbjct: 856 NSVPIARPKRNAKAPAYLSEYHCNSVPFLSSLSPTTSTSIETPSSSIPPKKITTPYPMST 915
Query: 1512 FLSYDHLSSSHRAFTLALTTVTEPKSYKEAVLHPEWQQAMQLELDALEDNNTWQLTSLPP 1333
+SYD L+ ++ A TEPK++ +A+ +W +A EL ALE N TW + SL
Sbjct: 916 AISYDKLTPLFHSYICAYNVETEPKAFTQAMKSEKWTRAANEELHALEQNKTWIVESLTE 975
Query: 1332 GKHPVGCKWVYRIKYHADGRIERYKARLVAKGYTQQEGVDYFDTFSPVAKLATVKLVLAI 1153
GK+ VGCKWV+ IKY+ DG IERYKARLVA+G+TQQEG+DY +TFSPVAK +VKL+L +
Sbjct: 976 GKNVVGCKWVFTIKYNPDGSIERYKARLVAQGFTQQEGIDYMETFSPVAKFGSVKLLLGL 1035
Query: 1152 AAVRCWHLIQMDVTNAFLYGDLHEDVYMSLPPGYQPKGELSITSNTVCKLQKSLYGLKQA 973
AA W L QMDV+NAFL+G+L E++YMSLP GY P +S+ S VC+L KSLYGLKQA
Sbjct: 1036 AAATGWSLTQMDVSNAFLHGELDEEIYMSLPQGYTPPTGISLPSKPVCRLLKSLYGLKQA 1095
Query: 972 SRQWFAKFFGALLAYGFQQCPGDHSLFTLVQGSSFLALLVYVDDIVIGGNDLAAIDALKH 793
SRQW+ + L F Q P D+++F V +S + +LVYVDD++I ND +A++ LK
Sbjct: 1096 SRQWYKRLSSVFLGANFIQSPADNTMFVKVSCTSIIVVLVYVDDLMIASNDSSAVENLKE 1155
Query: 792 FLSTQFKLKDLGVLKYFLGFEVARNLKGLSMCQRKYTLDLLDEAGLLGCKPRSTPVEYNS 613
L ++FK+KDLG ++FLG E+AR+ +G+S+CQRKY +LL++ GL GCKP S P++ N
Sbjct: 1156 LLRSEFKIKDLGPARFFLGLEIARSSEGISVCQRKYAQNLLEDVGLSGCKPSSIPMDPNL 1215
Query: 612 KLSKDSGTLLADPAPYRRLVGRLLYLTVTRPDITFVVHYLSQFVAVPS 469
L+K+ GTLL + YR LVGRLLYL +TRPDITF VH LSQF++ P+
Sbjct: 1216 HLTKEMGTLLPNATSYRELVGRLLYLCITRPDITFAVHTLSQFLSAPT 1263
Score = 133 bits (335), Expect(3) = e-147
Identities = 60/92 (65%), Positives = 74/92 (80%)
Frame = -1
Query: 478 RSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQ 299
RS+TG C++LG+SLI WKSKKQ+ VSRSS E+EYRSLA ATC+I+WL +L +
Sbjct: 1295 RSVTGFCIYLGTSLITWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTC 1354
Query: 298 PAPLFCDNQVALYITSNPVFHERTKHIEIDCH 203
PA LFCDN+ AL++ +NPVFHERTKHIEIDCH
Sbjct: 1355 PAKLFCDNKSALHLATNPVFHERTKHIEIDCH 1386
Score = 37.4 bits (85), Expect(3) = e-147
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = -3
Query: 200 DKYRAGLIKPLHVRSSCQLADILTKALSPCLFRAIVVKM 84
D+ +AG +K LHV + QLADILTK L P F +++ ++
Sbjct: 1390 DQIKAGKLKTLHVPTGNQLADILTKPLHPGPFHSLLKRI 1428
Score = 276 bits (707), Expect = 5e-75
Identities = 129/217 (59%), Positives = 164/217 (75%)
Frame = -2
Query: 2388 DVWGPFSHPTIEGFKYFLTIVDDCTRFTWTYLLRLKSEVTSILPSFFTLNRTQFGVSIKN 2209
D+WGPFS +++GF+YFLT+VDDCTR TW Y+++ KSEV++I P F L TQ+ IK
Sbjct: 562 DIWGPFSIESVDGFRYFLTLVDDCTRTTWVYMMKNKSEVSNIFPVFVKLIFTQYNAKIKA 621
Query: 2208 VRTDNAPEFALTQFFADSGIHHQLSCVECPQQNARVKRKHQHLLNVARALLFQSNIPLVY 2029
+R+DN E A T+F + G+ HQ SC PQQN+ V+RKHQHLLN+AR+LLFQSN+PL Y
Sbjct: 622 IRSDNVKELAFTKFVKEQGMIHQFSCAYTPQQNSVVERKHQHLLNIARSLLFQSNVPLQY 681
Query: 2028 WGDCILTSTYLINRLPTPLLHSKSPFECLFLRPPTYEHLKVFGCLAYGSTLLRGRTKFSP 1849
W DC+LT+ YLINRLP+PLL +K+PFE L + P Y LK CL Y ST + R KFSP
Sbjct: 682 WSDCVLTAAYLINRLPSPLLDNKTPFELLLKKIPDYTLLK--SCLCYASTNVHDRNKFSP 739
Query: 1848 RACKSVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHE 1738
RA VFLGYPSGYKGYK+LDL +++I I+RNV+FHE
Sbjct: 740 RARPCVFLGYPSGYKGYKVLDLESHSISITRNVVFHE 776
>ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
from transposon TNT 1-94 [Gossypium raimondii]
Length = 683
Score = 456 bits (1172), Expect = e-147
Identities = 247/499 (49%), Positives = 312/499 (62%), Gaps = 17/499 (3%)
Frame = -2
Query: 1914 LKVFGCLAYGSTLLRGRTKFSPRACKSVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHE- 1738
L++FGCL++ STL R KF PRA + VFLGY KGY LLD+ T I++SRNV FHE
Sbjct: 2 LRIFGCLSFASTLSAHRKKFDPRAKQCVFLGYKPHVKGYILLDIETRAIFVSRNVTFHET 61
Query: 1737 ------HTXXXXXXXXXXXXXXXXXPDTVXXXXXXXXXXXXXXXXPHSTPLT--RSGRPL 1582
H+ + P + P T R R
Sbjct: 62 IFPFLQHSLNNPTTPVGLLASDTIYDSPISPPQPSSTDQSSSTSHPPTQPSTSSRPQRNR 121
Query: 1581 RPPSYLNDY------VCSSISPVRYSLSQFLSYDHLSSSHRAFTLALTTVTEPKSYKEAV 1420
RPPSYL DY ++ +S+ +SY +LS H FTLA++ EPK+YK+A
Sbjct: 122 RPPSYLQDYQHYQLPAATNHPGTPHSIFNCISYHNLSPQHLHFTLAISASIEPKTYKQAS 181
Query: 1419 LHPEWQQAMQLELDALEDNNTWQLTSLPPGKHPVGCKWVYRIKYHADGRIERYKARLVAK 1240
W +AMQ E++ALE NNTW +T+LPPGK P GCKWV+R+K+ ADG ERYKARLVAK
Sbjct: 182 KFTHWNEAMQAEINALEQNNTWTMTTLPPGKTPXGCKWVFRVKHRADGSTERYKARLVAK 241
Query: 1239 GYTQQEGVDYFDTFSPVAKLATVKLVLAIAAVRCWHLIQMDVTNAFLYGDLHEDVYMSLP 1060
GYTQ GVDYFDTFSPVAK+ TV+L+LA+A R WH+ Q+DV NAFL+GDL+EDVYM P
Sbjct: 242 GYTQI-GVDYFDTFSPVAKITTVRLLLALATSRHWHIQQLDVNNAFLHGDLNEDVYMLPP 300
Query: 1059 PGYQPKGELSITSNTVCKLQKSLYGLKQASRQWFAKFFGALLAYGFQQCPGDHSLFTLVQ 880
PG+ S S VCKL KS+YGLKQASRQWF+K AL++ G+ Q DHS+FT
Sbjct: 301 PGF------SHDSTKVCKLHKSIYGLKQASRQWFSKLTTALISLGYIQSTADHSMFTKKH 354
Query: 879 GSSFLALLVYVDDIVIGGNDLAAIDALKHFLSTQFKLKDLGVLKYFLGFEVARNLKGLSM 700
F LL+YVDDI++ G I +K FL T F++KDLG LKYFLG EVAR +G+ +
Sbjct: 355 SEDFTVLLIYVDDIILTGTSSPEIMKVKQFLDTTFRIKDLGDLKYFLGLEVARTSQGIHI 414
Query: 699 CQRKYTLDLLDEAGLLGCKPRSTPVEYNS--KLSKDSGTLLADPAPYRRLVGRLLYLTVT 526
QRKY L++L E+G + CKP TP+ S KL+ G LL+D YR+LVG+LLYLT T
Sbjct: 415 SQRKYALEILQESGFIECKPAKTPMATKSVYKLTSTDGELLSDITSYRQLVGKLLYLTST 474
Query: 525 RPDITFVVHYLSQFVAVPS 469
R D+TF V LSQF+ P+
Sbjct: 475 RLDLTFAVQQLSQFMDKPT 493
Score = 124 bits (311), Expect(2) = 1e-29
Identities = 54/93 (58%), Positives = 70/93 (75%)
Frame = -1
Query: 478 RSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQ 299
RSITG+C+F G +LI W++KKQ TVSRSS+EAEYR+LA+ C++ WL +L +P
Sbjct: 541 RSITGYCIFFGEALISWRAKKQPTVSRSSSEAEYRALASTVCEVQWLHYLLCDLHVPISH 600
Query: 298 PAPLFCDNQVALYITSNPVFHERTKHIEIDCHL 200
P+FCDN+ + I SNP FHERTKHIEIDCH+
Sbjct: 601 ATPVFCDNKSTIQIASNPTFHERTKHIEIDCHI 633
Score = 36.2 bits (82), Expect(2) = 1e-29
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = -3
Query: 200 DKYRAGLIKPLHVRSSCQLADILTKALSPCLFRAIVVKMGLRNIFLPS 57
+K + ++ L SS QLAD+ TKAL+ F+ ++ K+G+ NI P+
Sbjct: 636 EKLQKDIVHLLPCTSSAQLADLFTKALAAQPFQDMISKLGMLNIHSPA 683
>gb|KYP38661.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 778
Score = 407 bits (1045), Expect(3) = e-145
Identities = 199/365 (54%), Positives = 258/365 (70%), Gaps = 1/365 (0%)
Frame = -2
Query: 1608 PLTRSGRPLRPPSYLNDYVCSSISPV-RYSLSQFLSYDHLSSSHRAFTLALTTVTEPKSY 1432
P S P RPP +L DYVC+ I + + L+ +LS +LS+SH+AF + EPKS+
Sbjct: 281 PTNHSQHPRRPPHHLKDYVCNHIKSITNFPLANYLSLSNLSNSHQAFLTNIIDNQEPKSF 340
Query: 1431 KEAVLHPEWQQAMQLELDALEDNNTWQLTSLPPGKHPVGCKWVYRIKYHADGRIERYKAR 1252
+A+ EW++AM E+ ALE NNTW L LP GK +GCKWVY+IKY +DG IERYKAR
Sbjct: 341 SQAMKSAEWREAMAKEIQALESNNTWSLCPLPQGKSSIGCKWVYKIKYRSDGSIERYKAR 400
Query: 1251 LVAKGYTQQEGVDYFDTFSPVAKLATVKLVLAIAAVRCWHLIQMDVTNAFLYGDLHEDVY 1072
LVAKGY Q EG+DY DTF+PVAKL V+L+L+IAA++ W L Q+DV N FL GDL+E+VY
Sbjct: 401 LVAKGYAQIEGIDYHDTFAPVAKLVIVRLLLSIAAIKNWSLHQLDVNNDFLQGDLNEEVY 460
Query: 1071 MSLPPGYQPKGELSITSNTVCKLQKSLYGLKQASRQWFAKFFGALLAYGFQQCPGDHSLF 892
M LPP + KGE VCKL K +YGLKQASRQWF+KF ++ GF+Q D+SLF
Sbjct: 461 MKLPPRFSRKGE-----TYVCKLHKFIYGLKQASRQWFSKFSTTIIQRGFRQSISDYSLF 515
Query: 891 TLVQGSSFLALLVYVDDIVIGGNDLAAIDALKHFLSTQFKLKDLGVLKYFLGFEVARNLK 712
T + G + + +LVYVDDI+I N+ AI +K FL+ F +KD G L+YFLG EV+R+ K
Sbjct: 516 TYISGQTSVFVLVYVDDIIITSNNDDAIFNIKQFLAQSFSIKDHGNLRYFLGIEVSRSKK 575
Query: 711 GLSMCQRKYTLDLLDEAGLLGCKPRSTPVEYNSKLSKDSGTLLADPAPYRRLVGRLLYLT 532
G+ +CQRKYTLD+L + G+ C+P P+E + +L + GTLL DP YRRL+GRLLYLT
Sbjct: 576 GIFLCQRKYTLDILSDTGMTSCRPSDFPMEQHLRLRPNDGTLLPDPTAYRRLIGRLLYLT 635
Query: 531 VTRPD 517
VTRPD
Sbjct: 636 VTRPD 640
Score = 129 bits (324), Expect(3) = e-145
Identities = 60/92 (65%), Positives = 70/92 (76%)
Frame = -1
Query: 478 RSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQ 299
RS TG+ LGSS I WK+KKQ TVSRSSAEAEYRSLAA T ++ WL +L +PHPQ
Sbjct: 651 RSTTGYFTMLGSSPISWKTKKQPTVSRSSAEAEYRSLAALTYELQWLTYLLSDLGLPHPQ 710
Query: 298 PAPLFCDNQVALYITSNPVFHERTKHIEIDCH 203
P P+ CD+Q ++I NPVFHERTKHIEIDCH
Sbjct: 711 PIPIHCDSQAGIHIAENPVFHERTKHIEIDCH 742
Score = 33.1 bits (74), Expect(3) = e-145
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -3
Query: 200 DKYRAGLIKPLHVRSSCQLADILTKAL 120
+K +AGLI P ++RS QLADI TK L
Sbjct: 746 EKIKAGLITPSYLRSRDQLADIFTKPL 772
>ref|XP_010532348.1| PREDICTED: uncharacterized protein LOC104808371 [Tarenaya
hassleriana]
Length = 1788
Score = 471 bits (1212), Expect = e-143
Identities = 230/388 (59%), Positives = 284/388 (73%), Gaps = 7/388 (1%)
Frame = -2
Query: 1608 PLTRSGRPLRPPSYLNDYVCSS-------ISPVRYSLSQFLSYDHLSSSHRAFTLALTTV 1450
P +R R ++ P YL+ Y C+S I Y +S L+YDH+S ++ F L L T
Sbjct: 690 PESRPKRNVKAPGYLSQYYCNSTHHDSQAIFSTPYPMSSVLTYDHISPEYKQFLLNLHTD 749
Query: 1449 TEPKSYKEAVLHPEWQQAMQLELDALEDNNTWQLTSLPPGKHPVGCKWVYRIKYHADGRI 1270
EPKS+KEA+L P+W QAM+ E+ AL DN TW + SLP K PVGCKWVY++K ++DG +
Sbjct: 750 IEPKSFKEAILSPQWTQAMETEIQALTDNGTWSIVSLPQSKKPVGCKWVYKVKRNSDGTV 809
Query: 1269 ERYKARLVAKGYTQQEGVDYFDTFSPVAKLATVKLVLAIAAVRCWHLIQMDVTNAFLYGD 1090
ERYKARLVAKG+TQQEG+DY DTFSPVAKL TVKL+LA+AA++ W L QMDVTNAFL+GD
Sbjct: 810 ERYKARLVAKGFTQQEGIDYEDTFSPVAKLVTVKLLLALAAIKNWSLTQMDVTNAFLHGD 869
Query: 1089 LHEDVYMSLPPGYQPKGELSITSNTVCKLQKSLYGLKQASRQWFAKFFGALLAYGFQQCP 910
L ED+YMSLPPGY P ++ N VCKLQKSLYGLKQASRQW+ KF L+ GF Q
Sbjct: 870 LDEDIYMSLPPGYTPPVGQNLPKNAVCKLQKSLYGLKQASRQWYRKFSSVLINSGFTQSQ 929
Query: 909 GDHSLFTLVQGSSFLALLVYVDDIVIGGNDLAAIDALKHFLSTQFKLKDLGVLKYFLGFE 730
DH+LF QG F ALLVYVDDIVI GND A+ LK L+ F +KDLG L+YFLG E
Sbjct: 930 ADHTLFVKKQGDVFTALLVYVDDIVIAGNDDRAVQNLKDTLNQHFNIKDLGPLRYFLGLE 989
Query: 729 VARNLKGLSMCQRKYTLDLLDEAGLLGCKPRSTPVEYNSKLSKDSGTLLADPAPYRRLVG 550
+AR+ KG+++CQRKY L+LL++ GL GCK S P++ N L DSG L+DP PYR L+G
Sbjct: 990 IARSSKGIALCQRKYCLELLNDTGLSGCKSVSVPMDPNVHLRHDSGQFLSDPTPYRALIG 1049
Query: 549 RLLYLTVTRPDITFVVHYLSQFVAVPSQ 466
RLLYLT+TRPDITF VH LSQF+A P++
Sbjct: 1050 RLLYLTITRPDITFPVHKLSQFLAKPTE 1077
Score = 257 bits (656), Expect = 2e-68
Identities = 119/213 (55%), Positives = 152/213 (71%)
Frame = -2
Query: 2376 PFSHPTIEGFKYFLTIVDDCTRFTWTYLLRLKSEVTSILPSFFTLNRTQFGVSIKNVRTD 2197
P + +I G++YFL IVDD +R TW Y+LR KS+V I P+F TL QF IK +R+D
Sbjct: 391 PENSASISGYRYFLIIVDDASRSTWIYMLRFKSDVMHIFPAFVTLIENQFQKVIKAIRSD 450
Query: 2196 NAPEFALTQFFADSGIHHQLSCVECPQQNARVKRKHQHLLNVARALLFQSNIPLVYWGDC 2017
NAPE + GI H SC P+QN+ V+RKHQH+LNVAR+L+FQSN+P YW DC
Sbjct: 451 NAPELSFKDLCLQKGIVHYFSCAYTPEQNSVVERKHQHILNVARSLMFQSNVPAEYWSDC 510
Query: 2016 ILTSTYLINRLPTPLLHSKSPFECLFLRPPTYEHLKVFGCLAYGSTLLRGRTKFSPRACK 1837
+ + YLINRLP+P+L K+P+E L+ +PP YEHL+ FGCL Y ST L+ R KFS RA
Sbjct: 511 VRCAIYLINRLPSPVLQEKTPYEVLYDKPPAYEHLRAFGCLCYSSTNLKDRHKFSVRARA 570
Query: 1836 SVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHE 1738
+VF+GYP GYKGYKLLD T +Y+SR+VIFHE
Sbjct: 571 AVFIGYPQGYKGYKLLDPVTQEVYVSRHVIFHE 603
Score = 110 bits (276), Expect = 3e-21
Identities = 50/79 (63%), Positives = 63/79 (79%)
Frame = -1
Query: 478 RSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQ 299
RS+TG C+FLG SLI +KSKKQNT+SRSS EAEYR+LA TC++VWL+ +L ++ H Q
Sbjct: 1124 RSVTGFCIFLGQSLISFKSKKQNTISRSSTEAEYRALANTTCEVVWLVHLLSDLQVSHQQ 1183
Query: 298 PAPLFCDNQVALYITSNPV 242
PA LFCDN+ ALYI SN +
Sbjct: 1184 PANLFCDNKSALYIASNQI 1202
>gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1376
Score = 447 bits (1149), Expect = e-136
Identities = 226/392 (57%), Positives = 284/392 (72%), Gaps = 7/392 (1%)
Frame = -2
Query: 1617 HSTPLTRSGRPLRPPSYLNDYVCSSISP-------VRYSLSQFLSYDHLSSSHRAFTLAL 1459
+S+PL RS R PPSYL DY S S + Y + +++SY LS+ +AF ++
Sbjct: 796 NSSPLRRSTRLRNPPSYLQDYHHSLTSTSTNLHPGMLYPIEKYISYSRLSNDFQAFVSSI 855
Query: 1458 TTVTEPKSYKEAVLHPEWQQAMQLELDALEDNNTWQLTSLPPGKHPVGCKWVYRIKYHAD 1279
+ V+EP SY EA H W +AM EL+AL+ N TW LT LPP K VGC+W+Y+IKY+AD
Sbjct: 856 SAVSEPHSYAEAAKHDCWLKAMHAELEALKMNQTWTLTPLPPHKQAVGCRWIYKIKYNAD 915
Query: 1278 GRIERYKARLVAKGYTQQEGVDYFDTFSPVAKLATVKLVLAIAAVRCWHLIQMDVTNAFL 1099
G IERYKARLVAKGYTQ EG+DY TFSPVAKL TV+L+LA+AAV WHL Q+DV NAFL
Sbjct: 916 GSIERYKARLVAKGYTQVEGLDYLATFSPVAKLTTVRLLLALAAVFDWHLKQLDVNNAFL 975
Query: 1098 YGDLHEDVYMSLPPGYQPKGELSITSNTVCKLQKSLYGLKQASRQWFAKFFGALLAYGFQ 919
+GDL+E+VYM+LP G +P+ SN VCKLQKSLYGLKQASRQWFAK L+ +G+
Sbjct: 976 HGDLNEEVYMTLPLGMRPE-----YSNQVCKLQKSLYGLKQASRQWFAKLSSFLIHHGYH 1030
Query: 918 QCPGDHSLFTLVQGSSFLALLVYVDDIVIGGNDLAAIDALKHFLSTQFKLKDLGVLKYFL 739
Q DHSLF SS ALL+YVDDIV+ GN+L+ I + L FK+KDLG LKYFL
Sbjct: 1031 QSASDHSLFMKFSSSSTTALLIYVDDIVLAGNNLSEIQLITGLLDVAFKIKDLGNLKYFL 1090
Query: 738 GFEVARNLKGLSMCQRKYTLDLLDEAGLLGCKPRSTPVEYNSKLSKDSGTLLADPAPYRR 559
G EVARN G+ + QRKY LD+L + G++ +P STP++Y S+LS SGT LADP+ YRR
Sbjct: 1091 GLEVARNKSGIHLSQRKYVLDILSDCGMMASRPVSTPMDYTSRLSASSGTPLADPSSYRR 1150
Query: 558 LVGRLLYLTVTRPDITFVVHYLSQFVAVPSQA 463
L+GRL+YLT TRPDI++VVH+LSQF++ PS A
Sbjct: 1151 LLGRLIYLTTTRPDISYVVHHLSQFMSAPSTA 1182
Score = 212 bits (540), Expect = 1e-53
Identities = 108/219 (49%), Positives = 137/219 (62%), Gaps = 1/219 (0%)
Frame = -2
Query: 2388 DVWGPFSH-PTIEGFKYFLTIVDDCTRFTWTYLLRLKSEVTSILPSFFTLNRTQFGVSIK 2212
D+WGP+S +I G K+F TIVDD T FTW +L+ KSE + +F L QF I+
Sbjct: 507 DIWGPYSCISSIHGHKFFFTIVDDNTHFTWIFLMINKSETRMHISNFINLIENQFNTRIQ 566
Query: 2211 NVRTDNAPEFALTQFFADSGIHHQLSCVECPQQNARVKRKHQHLLNVARALLFQSNIPLV 2032
++TDN EF + FF GI HQ +C+E PQQN V+RKHQHLLNV ALLF S +P
Sbjct: 567 TIQTDNGAEFLMQNFFNSKGIVHQTTCIETPQQNGVVERKHQHLLNVTHALLFHSKLPYC 626
Query: 2031 YWGDCILTSTYLINRLPTPLLHSKSPFECLFLRPPTYEHLKVFGCLAYGSTLLRGRTKFS 1852
+W +L +TYLINR+ TPLL +K+PF+ L+ + L+VFGCL Y ST R K
Sbjct: 627 FWSYALLHATYLINRITTPLLDNKTPFQKLYGQTCDITELRVFGCLCYVSTSTANRKKLD 686
Query: 1851 PRACKSVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHEH 1735
PRA VFLG+ KGY DL T I ISRNV F+E+
Sbjct: 687 PRAHPCVFLGFSPTTKGYITYDLHTRAITISRNVSFYEN 725
Score = 126 bits (316), Expect = 5e-26
Identities = 62/103 (60%), Positives = 75/103 (72%)
Frame = -1
Query: 478 RSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQ 299
RSITG ++LG SLI W+SKKQ TVSRSS+EAEYR+LA T ++ WL +L +P Q
Sbjct: 1228 RSITGFSVYLGDSLISWRSKKQPTVSRSSSEAEYRALATTTSELQWLTYLLHDLHVPVHQ 1287
Query: 298 PAPLFCDNQVALYITSNPVFHERTKHIEIDCHLTNIGLASSNL 170
PA L+CDNQ AL+I +N VFHERTKHI+IDCHL L S L
Sbjct: 1288 PALLYCDNQSALHIAANQVFHERTKHIDIDCHLVREKLQSGLL 1330
>ref|XP_007022140.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
gi|508721768|gb|EOY13665.1| Cysteine-rich RLK
(RECEPTOR-like protein kinase) 8 [Theobroma cacao]
Length = 624
Score = 405 bits (1040), Expect(3) = e-136
Identities = 203/385 (52%), Positives = 269/385 (69%), Gaps = 6/385 (1%)
Frame = -2
Query: 1608 PLTRSGRPLRPPSYLNDYVCSSISPVR----YSLSQFLSYDHLSSSHRAFTLALTTVTEP 1441
P+ +S RP P YL Y S + ++++LS LS +HR+FT++L+T+ EP
Sbjct: 101 PIRKSTRPKHIPKYLEAYQLDSPHQTNANTSHPITKYLSCHQLSPAHRSFTISLSTIFEP 160
Query: 1440 KSYKEAVLHPEWQQAMQLELDALEDNNTWQLTSLPPGKHPVGCKWVYRIKYHADGRIERY 1261
SY++AV H W++AM +EL ALEDN TW + LP H VGCKWVY++K +ADG++ERY
Sbjct: 161 NSYQKAVAHSHWKEAMDIELKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERY 220
Query: 1260 KARLVAKGYTQQEGVDYFDTFSPVAKLATVKLVLAIAAVRCWHLIQMDVTNAFLYGDLHE 1081
KARLVAKGY Q EG DY +TFSPVA+ V++ A+AA + W L Q+D+ NAFL G+L E
Sbjct: 221 KARLVAKGYNQIEGFDYQETFSPVARQTIVRMFFALAAAQNWRLSQLDINNAFLNGELTE 280
Query: 1080 DVYMSLPPGYQPKGELSITSNTVCKLQKSLYGLKQASRQWFAKFFGALLAYGFQQCPGDH 901
+VYM LP GY K E +S VCKL KSLYGLKQASR W +K ++L YGF+Q D+
Sbjct: 281 EVYMELPQGYTFKREYPTSSRLVCKLHKSLYGLKQASRAWNSKLTTSVLKYGFKQSNSDY 340
Query: 900 SLFTL-VQGSSFLALLVYVDDIVIGGNDLAAIDALKHFLSTQFKLKDLGVLKYFLGFEVA 724
SLFT+ F+ALLVYVDDI+I + + A + +K +LS++FKLKDLG +KYFLG E+A
Sbjct: 341 SLFTMKTHNGDFIALLVYVDDILIASSSIQAKNDVKGYLSSEFKLKDLGKVKYFLGLEIA 400
Query: 723 RNLKGLSMCQRKYTLDLLDEAGLLGCKPRSTPVEYNSKLSKDSG-TLLADPAPYRRLVGR 547
R+ +G+S+CQRKY L LL+E GLLG KP STP++YN KL K S L D YR+L+G+
Sbjct: 401 RSPEGISICQRKYALYLLEEHGLLGTKPASTPIDYNHKLVKSSDEDKLIDATSYRQLIGK 460
Query: 546 LLYLTVTRPDITFVVHYLSQFVAVP 472
LLYLT ++PDIT+ V LSQ + P
Sbjct: 461 LLYLTFSKPDITYAVQVLSQLMDKP 485
Score = 91.7 bits (226), Expect(3) = e-136
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = -1
Query: 400 RSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQPAPLFCDNQVALYITSNPVFHERTKH 221
RSS EAEYRS+A A C+I+WL S++ F I HP+ L+ D+Q +YI+ NPV HERTKH
Sbjct: 508 RSSVEAEYRSMAVACCEIMWLKSLMTDFHIDHPEAVNLYTDSQSTIYISKNPVLHERTKH 567
Query: 220 IEIDCH 203
IE+DCH
Sbjct: 568 IEMDCH 573
Score = 41.2 bits (95), Expect(3) = e-136
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = -3
Query: 200 DKYRAGLIKPLHVRSSCQLADILTKALSPCLFRAIVVKMGLRNI 69
+K AGLI PL++ + QL+DI TK L P F ++ KM + +I
Sbjct: 577 EKVMAGLINPLYISTQSQLSDIFTKGLQPRQFHFLMSKMNVHDI 620
>gb|KYP48329.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 478
Score = 371 bits (953), Expect(3) = e-135
Identities = 186/313 (59%), Positives = 231/313 (73%), Gaps = 2/313 (0%)
Frame = -2
Query: 1395 MQLELDALEDNNTWQLTSLPPGKHPVGCKWVYRIKYHADGRIERYKARLVAKGYTQQEGV 1216
M E+ ALE NNTW LT LP K +GCKWVY+IK+ +D IERYKARLVAKGYTQ EG
Sbjct: 1 MNSEIKALESNNTWILTQLPSHKAAIGCKWVYKIKHRSDDSIERYKARLVAKGYTQVEGQ 60
Query: 1215 DYFDTFSPVAKLATVKLVLAIAAVRCWHLIQMDVTNAFLYGDLHEDVYMSLPPGYQPKGE 1036
DY DTFSPVAKL TV+L+LA+AA+ WHL Q+DV NAFL+GDL+E++YM++P
Sbjct: 61 DYLDTFSPVAKLTTVRLLLALAAINKWHLKQLDVNNAFLHGDLNEEIYMTIPQRMH---- 116
Query: 1035 LSITSNTVCKLQKSLYGLKQASRQWFAKFFGALLAYGFQQCPGDHSLFTLVQGSSFLALL 856
SI S VCKLQ+SLYGLKQASRQW+A+ L ++G++QC DHSLF Q S ALL
Sbjct: 117 -SIQSGQVCKLQRSLYGLKQASRQWYARLSHFLTSHGYKQCASDHSLFLKHQSDSITALL 175
Query: 855 VYVDDIVIGGNDLAAIDALKHFLSTQFKLKDLGVLKYFLGFEVARNLKGLSMCQRKYTLD 676
VYVDDIV+ GNDL I + H L FK+K+LG LK+FLGFEVAR G+++CQRKY LD
Sbjct: 176 VYVDDIVLSGNDLNEIHHITHLLDVTFKIKELGDLKFFLGFEVARTATGINLCQRKYALD 235
Query: 675 LLDEAGLLGCKPRSTPVEYNSKLSKDSGTLLA--DPAPYRRLVGRLLYLTVTRPDITFVV 502
+L + G+LG KP STP +Y ++L ++SG L+ D YRRL+ RL+YLT TRPDITFVV
Sbjct: 236 ILIDTGMLGSKPISTPSDYTTRLHQNSGFRLSAEDATSYRRLIDRLIYLTNTRPDITFVV 295
Query: 501 HYLSQFVAVPSQA 463
+LSQ VA P+ +
Sbjct: 296 QHLSQLVAQPTSS 308
Score = 125 bits (315), Expect(3) = e-135
Identities = 58/93 (62%), Positives = 76/93 (81%)
Frame = -1
Query: 478 RSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQ 299
RSITG ++LGS+LI WKSK Q TVS+SS+++EYR+LA ATC++ WL S+L F++
Sbjct: 338 RSITGFSIYLGSTLISWKSKMQATVSKSSSKSEYRALANATCELQWLTSLLVEFQLFFHH 397
Query: 298 PAPLFCDNQVALYITSNPVFHERTKHIEIDCHL 200
PA L+CDN+ AL+I +NPVFHERTKHIEIDCH+
Sbjct: 398 PAMLYCDNKSALHIATNPVFHERTKHIEIDCHI 430
Score = 38.5 bits (88), Expect(3) = e-135
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = -3
Query: 200 DKYRAGLIKPLHVRSSCQLADILTKALSPCLFRAIVVKMGLRNI 69
+K +AG++K L + + QLADI TK++ P F+ + K+G+ NI
Sbjct: 433 EKVQAGILKLLPITFANQLADIYTKSMLPSAFQFLQSKLGMSNI 476
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 439 bits (1128), Expect = e-133
Identities = 216/359 (60%), Positives = 276/359 (76%)
Frame = -2
Query: 1548 SSISPVRYSLSQFLSYDHLSSSHRAFTLALTTVTEPKSYKEAVLHPEWQQAMQLELDALE 1369
SS+S R+ L++++SY LS +R F A+TT+ EP +Y++AVL P+WQ+AM EL ALE
Sbjct: 916 SSLSGTRHPLTRYISYAQLSPKYRNFVCAITTLVEPTTYEQAVLDPKWQEAMAAELHALE 975
Query: 1368 DNNTWQLTSLPPGKHPVGCKWVYRIKYHADGRIERYKARLVAKGYTQQEGVDYFDTFSPV 1189
N+TW LT LP G P+GCKWVY+IKY++DG +ERYKARLVAKG+TQ+EG+DY +TFSPV
Sbjct: 976 QNHTWTLTPLPYGHRPIGCKWVYKIKYNSDGTVERYKARLVAKGFTQREGIDYKETFSPV 1035
Query: 1188 AKLATVKLVLAIAAVRCWHLIQMDVTNAFLYGDLHEDVYMSLPPGYQPKGELSITSNTVC 1009
AKL TV+ +LAIAAVR W L QMDV NAFL+GDL E+VYM LP G++ +GE + VC
Sbjct: 1036 AKLTTVRCLLAIAAVRHWSLHQMDVQNAFLHGDLLEEVYMQLPLGFRQQGETPM----VC 1091
Query: 1008 KLQKSLYGLKQASRQWFAKFFGALLAYGFQQCPGDHSLFTLVQGSSFLALLVYVDDIVIG 829
+L KSLYGLKQASR WF KF + GF Q D+SLFT + G+SF A+L+YVDD++I
Sbjct: 1092 RLNKSLYGLKQASRSWFRKFSATIQQDGFHQSRADYSLFTKISGNSFTAVLIYVDDMIIT 1151
Query: 828 GNDLAAIDALKHFLSTQFKLKDLGVLKYFLGFEVARNLKGLSMCQRKYTLDLLDEAGLLG 649
GND I ALK L T+F++KDLG L+YFLG EVAR+ G+S+ QRKYTLD+LDEAGLLG
Sbjct: 1152 GNDENVIAALKESLHTKFRIKDLGQLRYFLGIEVARSTDGISISQRKYTLDILDEAGLLG 1211
Query: 648 CKPRSTPVEYNSKLSKDSGTLLADPAPYRRLVGRLLYLTVTRPDITFVVHYLSQFVAVP 472
KP STP+E N+KL G LL +P+ YRRLVG+L+YLT+TRP+I++ VH LSQF+ P
Sbjct: 1212 AKPLSTPMEENNKLLPTVGDLLKNPSTYRRLVGQLIYLTITRPEISYSVHILSQFMQEP 1270
Score = 233 bits (593), Expect = 2e-60
Identities = 114/220 (51%), Positives = 147/220 (66%), Gaps = 1/220 (0%)
Frame = -2
Query: 2391 CDVWGPFSHPTIEGFKYFLTIVDDCTRFTWTYLLRLKSEVTSILPSFFTLNRTQFGVSIK 2212
CD+WGP + G YFLTIVDD TR+TW +L+ KSE IL SF + TQF IK
Sbjct: 598 CDIWGPHRINSHSGAXYFLTIVDDHTRYTWIHLMSFKSETQGILQSFISWVETQFNRCIK 657
Query: 2211 NVRTDNAPEFA-LTQFFADSGIHHQLSCVECPQQNARVKRKHQHLLNVARALLFQSNIPL 2035
+RTDN E + + Q+ GI++ SC PQQN V+RKH+HLLNV RAL FQ+N+PL
Sbjct: 658 TLRTDNGTEISSMKQYLDTKGINYHHSCAYTPQQNGVVERKHRHLLNVGRALRFQANLPL 717
Query: 2034 VYWGDCILTSTYLINRLPTPLLHSKSPFECLFLRPPTYEHLKVFGCLAYGSTLLRGRTKF 1855
+WG+ I T+ YLINRLPTPLL KSP++ L + P+Y HL+ FGCL Y + LL KF
Sbjct: 718 KFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLRTFGCLCYATNLLPTH-KF 776
Query: 1854 SPRACKSVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHEH 1735
RA + +F+GYP G KGY++ DL TN + S +V+FHEH
Sbjct: 777 DQRARRCIFVGYPLGQKGYRVYDLXTNKFFSSXDVVFHEH 816
Score = 135 bits (341), Expect = 5e-29
Identities = 67/136 (49%), Positives = 92/136 (67%), Gaps = 2/136 (1%)
Frame = -1
Query: 490 SICCRSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRI 311
SI RS+TG+C+FL + I WK+KKQ TVSRSS E+EYR++A+ TC++ WL +LD ++
Sbjct: 1315 SITRRSVTGYCIFLXGAXISWKTKKQTTVSRSSXESEYRAMASITCELTWLRYLLDDLKV 1374
Query: 310 PHPQPAPLFCDNQVALYITSNPVFHERTKHIEIDCHLTNIGLASSNLCMFVLLANLLISL 131
H QPA LFCD++ AL+I +NPV+HERTKHIEIDCH+ + S A + +
Sbjct: 1375 EHSQPAKLFCDSKAALHIAANPVYHERTKHIEIDCHVVRERIQSG--------AIVTAHV 1426
Query: 130 PRPCLL--VFSVPLLS 89
P C L +F+ PL S
Sbjct: 1427 PSSCQLADLFTKPLNS 1442
>gb|KYP34377.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 938
Score = 426 bits (1096), Expect = e-132
Identities = 212/377 (56%), Positives = 271/377 (71%), Gaps = 1/377 (0%)
Frame = -2
Query: 1608 PLTRSGRPLRPPSYLNDYVCSSI-SPVRYSLSQFLSYDHLSSSHRAFTLALTTVTEPKSY 1432
P S RP RPP +L DYVC+ I S + L+ +LS +LS+ H+ F + EPKS+
Sbjct: 567 PTNHSQRPRRPPHHLKDYVCNHIKSTTNFPLANYLSLSNLSNFHQPFLTNIIGNQEPKSF 626
Query: 1431 KEAVLHPEWQQAMQLELDALEDNNTWQLTSLPPGKHPVGCKWVYRIKYHADGRIERYKAR 1252
+A+ EW++AM E+ ALE NNTW L LP GK +GCKWVY+IKY +DG IERYKA
Sbjct: 627 SQAMKSAEWREAMAKEIQALESNNTWSLCPLPQGKSSIGCKWVYKIKYRSDGSIERYKAC 686
Query: 1251 LVAKGYTQQEGVDYFDTFSPVAKLATVKLVLAIAAVRCWHLIQMDVTNAFLYGDLHEDVY 1072
LVAKGYTQ EG+DY DTF+PVAKL TV+L+L+IAA++ W L Q+DV NAFL GDL+E+VY
Sbjct: 687 LVAKGYTQIEGIDYHDTFAPVAKLVTVRLLLSIAAIKNWSLHQLDVNNAFLQGDLNEEVY 746
Query: 1071 MSLPPGYQPKGELSITSNTVCKLQKSLYGLKQASRQWFAKFFGALLAYGFQQCPGDHSLF 892
M LPPG+ KGE VCKL KS+YGLKQASRQWF+KF L+ GF+Q D+SLF
Sbjct: 747 MKLPPGFSRKGE-----TYVCKLHKSIYGLKQASRQWFSKFSTTLIQRGFRQSISDYSLF 801
Query: 891 TLVQGSSFLALLVYVDDIVIGGNDLAAIDALKHFLSTQFKLKDLGVLKYFLGFEVARNLK 712
T + G + + +LVY+DDI+I GN+ AI +K FL+ F +KDLG L+YFL EV+R+ K
Sbjct: 802 TYISGQTSVFVLVYIDDIIITGNNDDAIFNIKQFLAQSFSIKDLGNLRYFLAIEVSRSKK 861
Query: 711 GLSMCQRKYTLDLLDEAGLLGCKPRSTPVEYNSKLSKDSGTLLADPAPYRRLVGRLLYLT 532
G+ +CQRKYTLD+L + G+ GC+P P+E + L + TLL DP YRRLVGRLLYLT
Sbjct: 862 GIFLCQRKYTLDILSDTGMTGCRPSDFPMEQHLCLRPNDYTLLPDPTAYRRLVGRLLYLT 921
Query: 531 VTRPDITFVVHYLSQFV 481
VTRPDI +VV+ LSQF+
Sbjct: 922 VTRPDIQYVVNTLSQFM 938
Score = 120 bits (300), Expect = 3e-24
Identities = 75/235 (31%), Positives = 112/235 (47%), Gaps = 18/235 (7%)
Frame = -2
Query: 2388 DVWGPFSHPTIEGFKYFLTIVDDCTRFTWTYLLRLKSEVTSILPSFFTLNRTQFGVSI-- 2215
D+WGPFS + G +YFLTI+DD ++ TW YL++ KSE +++ FF QF I
Sbjct: 287 DIWGPFSILSNNGSRYFLTIIDDYSQCTWLYLMKHKSETFNMIVHFFNQIHRQFNTKIDQ 346
Query: 2214 -------------KNVRTDNAPEF---ALTQFFADSGIHHQLSCVECPQQNARVKRKHQH 2083
+ +R+DN EF + +F D G+ HQ SCV P++N V+
Sbjct: 347 INSGNGDVFLPQLQTIRSDNGSEFLSKPMQTWFHDHGVIHQRSCVATPKKNGVVE----- 401
Query: 2082 LLNVARALLFQSNIPLVYWGDCILTSTYLINRLPTPLLHSKSPFECLFLRPPTYEHLKVF 1903
R +LF ++ PP+Y L+VF
Sbjct: 402 --CTTRKILFSTS------------------------------------HPPSYSSLRVF 423
Query: 1902 GCLAYGSTLLRGRTKFSPRACKSVFLGYPSGYKGYKLLDLSTNTIYISRNVIFHE 1738
GCL + +T + + KF R+ +F+GYP G KGY++ DL + IY+S +V FHE
Sbjct: 424 GCLCF-ATNMNIQHKFDERSKPGIFVGYPFGQKGYRIYDLQSRKIYVSCDVQFHE 477
>ref|XP_013745170.1| PREDICTED: uncharacterized protein LOC106447743 [Brassica napus]
Length = 1266
Score = 433 bits (1113), Expect = e-132
Identities = 211/402 (52%), Positives = 289/402 (71%), Gaps = 20/402 (4%)
Frame = -2
Query: 1614 STPLTRSGRPLRPPSYLNDYVCSSIS---PVR-----------------YSLSQFLSYDH 1495
S P+ RS R + PSYL++Y C+ +S P+ Y LS LSYD
Sbjct: 668 SVPMPRSKRTTKAPSYLSEYHCNLVSYNSPIEPPPVYCFSSLITTSTTPYPLSSVLSYDK 727
Query: 1494 LSSSHRAFTLALTTVTEPKSYKEAVLHPEWQQAMQLELDALEDNNTWQLTSLPPGKHPVG 1315
L +++++ A T TEPK++++A+ +W++++ +E +ALE N TW + SLP GK+ VG
Sbjct: 728 LHPTYQSYVFAYTAETEPKNFRQAMTSDKWKESVNVEFEALELNRTWDVESLPDGKNVVG 787
Query: 1314 CKWVYRIKYHADGRIERYKARLVAKGYTQQEGVDYFDTFSPVAKLATVKLVLAIAAVRCW 1135
CKWV+ IKY+ DG +ERYK+RLVA+G+TQQEG+DY DTFSPVAKL +VKL+L++AA R +
Sbjct: 788 CKWVFTIKYNPDGTVERYKSRLVAQGFTQQEGLDYLDTFSPVAKLTSVKLLLSLAAARGY 847
Query: 1134 HLIQMDVTNAFLYGDLHEDVYMSLPPGYQPKGELSITSNTVCKLQKSLYGLKQASRQWFA 955
L QMDV+NAFL+GDL E++YMSLP GY P + + N VC+L+KSLYGLKQASRQW+
Sbjct: 848 KLTQMDVSNAFLHGDLEEEIYMSLPQGYTPPPGMILPPNPVCRLRKSLYGLKQASRQWYK 907
Query: 954 KFFGALLAYGFQQCPGDHSLFTLVQGSSFLALLVYVDDIVIGGNDLAAIDALKHFLSTQF 775
+F LL F Q P D++LF SSF+A+LVYVDDI+I ND AA+ L+ L ++F
Sbjct: 908 RFSSVLLGANFIQSPADNTLFVKATSSSFVAVLVYVDDILIASNDDAALANLQSLLRSEF 967
Query: 774 KLKDLGVLKYFLGFEVARNLKGLSMCQRKYTLDLLDEAGLLGCKPRSTPVEYNSKLSKDS 595
K+KDLG ++FLG E+AR+ G+S+CQRKY L+LL+++GLLGCKP S P++ + L+KD
Sbjct: 968 KIKDLGPARFFLGLEIARSSDGISVCQRKYALNLLEDSGLLGCKPSSVPMDPSLHLTKDL 1027
Query: 594 GTLLADPAPYRRLVGRLLYLTVTRPDITFVVHYLSQFVAVPS 469
GT L+ P YR L+GRLLYLT+TRPDITF VH LSQF++ P+
Sbjct: 1028 GTPLSSPTVYRELIGRLLYLTITRPDITFAVHQLSQFLSAPT 1069
Score = 134 bits (336), Expect = 2e-28
Identities = 64/106 (60%), Positives = 78/106 (73%)
Frame = -1
Query: 478 RSITGHCMFLGSSLIHWKSKKQNTVSRSSAEAEYRSLAAATCDIVWLLSMLDTFRIPHPQ 299
RSITG C++LG+SLI WKSKKQ+ VSRSS EAEYRSLA TC+I+WL +L R+P
Sbjct: 1117 RSITGFCVYLGTSLISWKSKKQSVVSRSSTEAEYRSLALTTCEIIWLQQLLVDLRVP-SS 1175
Query: 298 PAPLFCDNQVALYITSNPVFHERTKHIEIDCHLTNIGLASSNLCMF 161
PA L+CDN+ AL+I NPVFHERTKHI+IDCH + + L F
Sbjct: 1176 PAKLYCDNKSALHIAMNPVFHERTKHIDIDCHTVRDQIKAGKLKTF 1221