BLASTX nr result
ID: Rehmannia27_contig00045981
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00045981
(536 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP48030.1| Retrovirus-related Pol polyprotein from transposo... 95 3e-21
emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera] 99 4e-21
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 99 5e-21
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 99 5e-21
gb|EXX70798.1| hypothetical protein RirG_084260 [Rhizophagus irr... 90 2e-20
emb|CAN72239.1| hypothetical protein VITISV_010776 [Vitis vinifera] 90 3e-20
emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera] 96 3e-20
emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera] 96 5e-20
emb|CAN77659.1| hypothetical protein VITISV_030914 [Vitis vinifera] 96 6e-20
gb|KYP63307.1| Retrovirus-related Pol polyprotein from transposo... 93 1e-19
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop... 95 1e-19
ref|XP_013639641.1| PREDICTED: retrovirus-related Pol polyprotei... 91 2e-19
gb|KYP72642.1| Retrovirus-related Pol polyprotein from transposo... 92 2e-19
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera] 94 3e-19
gb|KYP54199.1| Retrovirus-related Pol polyprotein from transposo... 91 3e-19
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 94 4e-19
gb|KYP60450.1| Retrovirus-related Pol polyprotein from transposo... 88 7e-19
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 93 8e-19
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 92 1e-18
dbj|BAT73418.1| hypothetical protein VIGAN_01089700 [Vigna angul... 86 1e-18
>gb|KYP48030.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 194
Score = 94.7 bits (234), Expect = 3e-21
Identities = 44/77 (57%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = +2
Query: 32 VFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFNPADMGTKCLP 211
++ D+QS I L KN V H+RTKH+DV+FHF+RD+V+ ++ +EKVA+E N ADM TK LP
Sbjct: 118 IYCDNQSAICLTKNQVHHERTKHVDVKFHFVRDVVASDVVKIEKVATEENAADMLTKALP 177
Query: 212 LSKFKTCLKILNF-DTG 259
+KF+ CLK+LN DTG
Sbjct: 178 SNKFEFCLKLLNVTDTG 194
>emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera]
Length = 817
Score = 99.4 bits (246), Expect = 4e-21
Identities = 44/84 (52%), Positives = 63/84 (75%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
E+ L V +FSDSQS I+LCKN +FH+RTKH+DVR+HFIR+ VS G + LEK+++ N
Sbjct: 718 ELRVLNIVVEIFSDSQSAIELCKNLMFHERTKHVDVRYHFIRETVSSGAMKLEKISTTDN 777
Query: 182 PADMGTKCLPLSKFKTCLKILNFD 253
PA+M TK LP+ K++ CL ++ +
Sbjct: 778 PANMATKVLPIRKYRYCLDLVQVE 801
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 99.0 bits (245), Expect = 5e-21
Identities = 46/81 (56%), Positives = 58/81 (71%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
E+ L V +F DSQS IQLC NP FH RTKHIDVR+HFIR+ +S G + LEK++ N
Sbjct: 687 ELXVLNSVVEIFLDSQSAIQLCNNPXFHXRTKHIDVRYHFIRETISSGAMKLEKISXVDN 746
Query: 182 PADMGTKCLPLSKFKTCLKIL 244
PADM TK LP++KFK L ++
Sbjct: 747 PADMATKVLPVTKFKYSLDLV 767
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 99.0 bits (245), Expect = 5e-21
Identities = 46/82 (56%), Positives = 61/82 (74%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
E+G ++ V VF DSQS + L KN FH+RTKHIDVRFHFIRDI +GL+N+ K++++ N
Sbjct: 854 ELGMNQKSVTVFCDSQSALCLTKNQGFHERTKHIDVRFHFIRDIAEQGLVNVSKISTKDN 913
Query: 182 PADMGTKCLPLSKFKTCLKILN 247
PADM TK + KFK CL ++N
Sbjct: 914 PADMLTKPISKVKFKQCLNLIN 935
>gb|EXX70798.1| hypothetical protein RirG_084260 [Rhizophagus irregularis DAOM
197198w]
Length = 103
Score = 89.7 bits (221), Expect = 2e-20
Identities = 39/71 (54%), Positives = 56/71 (78%)
Frame = +2
Query: 32 VFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFNPADMGTKCLP 211
+F DSQS I L K+ +FH+RTKHIDVR+HFIRD++SKG I ++K+++ NPADM TK +P
Sbjct: 29 IFCDSQSAIYLTKDQMFHERTKHIDVRYHFIRDVISKGDIQVQKISTHDNPADMMTKPVP 88
Query: 212 LSKFKTCLKIL 244
+KF+ C ++
Sbjct: 89 ATKFELCSSLV 99
>emb|CAN72239.1| hypothetical protein VITISV_010776 [Vitis vinifera]
Length = 104
Score = 89.7 bits (221), Expect = 3e-20
Identities = 43/82 (52%), Positives = 56/82 (68%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
E+ K KVVV+ D+QS I L KN FH+R KHIDVR HF+RDI+ G I + K+ E N
Sbjct: 19 ELAMYKGKVVVYCDNQSAIHLAKNQSFHERFKHIDVRLHFVRDIIIAGKIGVGKIHIEDN 78
Query: 182 PADMGTKCLPLSKFKTCLKILN 247
P+DM TK L ++KF CL ++N
Sbjct: 79 PSDMLTKSLNVTKFNHCLNLVN 100
>emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera]
Length = 421
Score = 95.9 bits (237), Expect = 3e-20
Identities = 45/75 (60%), Positives = 58/75 (77%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
E+G L V +F +SQS IQLCKN VFH+RTKH+DVR+HFIR+IVS G + LEK+++ N
Sbjct: 346 ELGVLNSVVEIFLNSQSAIQLCKNLVFHERTKHVDVRYHFIREIVSLGAVKLEKISTTDN 405
Query: 182 PADMGTKCLPLSKFK 226
ADM TK L +SKF+
Sbjct: 406 SADMATKVLLVSKFR 420
>emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]
Length = 1842
Score = 96.3 bits (238), Expect = 5e-20
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
E+G L V +FSDSQS IQLCKN VFH+RTKH++VR+HFIR+IVS + LEK++ N
Sbjct: 1762 ELGVLNSVVEIFSDSQSTIQLCKNXVFHERTKHVNVRYHFIREIVSSRKMKLEKISLADN 1821
Query: 182 PADMGTKCLPLSKFKTCLKIL 244
P DM TK LP+ KF L ++
Sbjct: 1822 PIDMATKVLPVRKFXYYLDLV 1842
Score = 55.1 bits (131), Expect = 9e-06
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +2
Query: 5 IGFL---KQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASE 175
+GF+ +++ V +SDSQ+ I K+P +H+RTKHID + +FIRDI+++ + L+ + +
Sbjct: 1149 VGFIIQGQERKVFYSDSQATIAYVKDPKYHERTKHIDTKNNFIRDIIARNEVILKYLPTX 1208
Query: 176 FNPADMGTKCLPLSKFKTCLK 238
AD TK + F +K
Sbjct: 1209 EMVADPFTKSISRDMFXIHVK 1229
>emb|CAN77659.1| hypothetical protein VITISV_030914 [Vitis vinifera]
Length = 626
Score = 95.9 bits (237), Expect = 6e-20
Identities = 40/81 (49%), Positives = 61/81 (75%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
E+G+ ++ V VF D+QS I L +NP+FH+R+KHIDV+ HFIR+ +S G + +K+A+E N
Sbjct: 531 EMGYKQETVTVFCDNQSAIYLVRNPMFHERSKHIDVKLHFIREXISSGAVKFDKIATEEN 590
Query: 182 PADMGTKCLPLSKFKTCLKIL 244
P D TK LP++KF+ CL ++
Sbjct: 591 PTDALTKSLPVAKFELCLNLI 611
>gb|KYP63307.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 322
Score = 93.2 bits (230), Expect = 1e-19
Identities = 43/77 (55%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = +2
Query: 32 VFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFNPADMGTKCLP 211
++ D+QS I L KN V H+RTKH+DV+FHF+RD+V+ ++ +EKVA+E N DM TK LP
Sbjct: 246 IYCDNQSAICLTKNQVHHERTKHVDVKFHFVRDVVASDVVKIEKVATEENAVDMLTKALP 305
Query: 212 LSKFKTCLKILNF-DTG 259
+KF+ CLK+LN DTG
Sbjct: 306 SNKFEFCLKLLNVTDTG 322
>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1137
Score = 95.1 bits (235), Expect = 1e-19
Identities = 43/81 (53%), Positives = 63/81 (77%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
E+GF+++ V + DSQS I L KN V+H+RTKHIDV++HFIRD+V+ G + + K+ +E N
Sbjct: 1052 ELGFVQKTVNIHCDSQSAIALAKNAVYHERTKHIDVKYHFIRDLVNNGEVQVLKIDTEDN 1111
Query: 182 PADMGTKCLPLSKFKTCLKIL 244
PAD+ TK LP+SKF+ L++L
Sbjct: 1112 PADIFTKVLPVSKFQDALELL 1132
>ref|XP_013639641.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Brassica oleracea var. oleracea]
Length = 255
Score = 91.3 bits (225), Expect = 2e-19
Identities = 39/81 (48%), Positives = 63/81 (77%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
E+GF + V VF DSQS I L +NPV H++TKH+DV+++F+R++VS+ +I++ K+A+++N
Sbjct: 170 ELGFEQDLVEVFCDSQSAIALSRNPVHHEKTKHVDVKYNFVRELVSEKIIDVVKIATQYN 229
Query: 182 PADMGTKCLPLSKFKTCLKIL 244
PAD+ TK LP+ K + L+ L
Sbjct: 230 PADIFTKVLPVGKMREALRFL 250
>gb|KYP72642.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 296
Score = 92.0 bits (227), Expect = 2e-19
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
++G + +V + DSQS I L + +H+RTKHID+R+HFIRD++ I + K+A+E N
Sbjct: 212 DLGINQSRVTINCDSQSAIHLANHHTYHERTKHIDIRYHFIRDMIETRKIQVLKIATEDN 271
Query: 182 PADMGTKCLPLSKFKTCLKILNFDT 256
PADM TK LP +KFK CL ++NF +
Sbjct: 272 PADMLTKSLPRAKFKHCLDLINFSS 296
>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
Length = 735
Score = 94.0 bits (232), Expect = 3e-19
Identities = 44/82 (53%), Positives = 60/82 (73%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
E+ K KVVV+ D+QS I L KN FH+R+KHIDVR HF+RDI++ G I + KV ++ N
Sbjct: 650 ELAMYKGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAVGEIGVGKVPTKDN 709
Query: 182 PADMGTKCLPLSKFKTCLKILN 247
P+DM TK L ++KFK CL ++N
Sbjct: 710 PSDMLTKSLNVTKFKHCLNLIN 731
>gb|KYP54199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 256
Score = 90.9 bits (224), Expect = 3e-19
Identities = 42/80 (52%), Positives = 57/80 (71%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
E+GF+++K ++F DSQS I L KNP FH R+KHIDVR+H IRD + L+ L K+ ++ N
Sbjct: 169 ELGFVQEKYLLFVDSQSAIHLGKNPTFHSRSKHIDVRYHLIRDALDAKLLELAKIHTDDN 228
Query: 182 PADMGTKCLPLSKFKTCLKI 241
ADM TK LP KF+ C +I
Sbjct: 229 GADMMTKALPREKFEICYEI 248
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 93.6 bits (231), Expect = 4e-19
Identities = 42/81 (51%), Positives = 61/81 (75%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
+ G+ ++ V +F DSQS I L KN V H+RTKHIDV+FHFIR+I++ G + + K+++E N
Sbjct: 1278 DFGYEQKNVEIFCDSQSAIALSKNNVHHERTKHIDVKFHFIREIIADGKVEVSKISTEKN 1337
Query: 182 PADMGTKCLPLSKFKTCLKIL 244
PAD+ TK LP++KF+T L L
Sbjct: 1338 PADIFTKVLPVNKFQTALDFL 1358
>gb|KYP60450.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 167
Score = 87.8 bits (216), Expect = 7e-19
Identities = 42/80 (52%), Positives = 56/80 (70%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
E+GF+ +K +F DSQS I L KNP FH R+KHIDVR+H+IRD + L+ L K+ ++ N
Sbjct: 80 ELGFVLEKYPLFVDSQSVIHLGKNPTFHSRSKHIDVRYHWIRDALDAKLLELAKIHTDDN 139
Query: 182 PADMGTKCLPLSKFKTCLKI 241
ADM TK LP KF+ C +I
Sbjct: 140 GADMMTKALPRGKFEVCSEI 159
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 92.8 bits (229), Expect = 8e-19
Identities = 43/82 (52%), Positives = 60/82 (73%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
E+ + KVVV+ D+QS I L KN FH+R+KHIDVR HF+RDI++ G I + KV ++ N
Sbjct: 1123 ELAMYRGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAAGEIGVGKVHTKDN 1182
Query: 182 PADMGTKCLPLSKFKTCLKILN 247
P+DM TK L ++KFK CL ++N
Sbjct: 1183 PSDMLTKSLNVTKFKHCLNLIN 1204
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 92.4 bits (228), Expect = 1e-18
Identities = 45/81 (55%), Positives = 59/81 (72%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
E+G + V V SDSQS I L KN V H+RTKHID+R HFIRDI+ GLI + K+A+E N
Sbjct: 1250 ELGHSQDYVEVHSDSQSAITLAKNSVHHERTKHIDIRLHFIRDIICAGLIKVVKIATECN 1309
Query: 182 PADMGTKCLPLSKFKTCLKIL 244
PA++ TK +PL+KF+ L +L
Sbjct: 1310 PANIFTKTVPLAKFEGALNML 1330
>dbj|BAT73418.1| hypothetical protein VIGAN_01089700 [Vigna angularis var.
angularis]
Length = 120
Score = 85.9 bits (211), Expect = 1e-18
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = +2
Query: 2 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGLINLEKVASEFN 181
E+GF+++K V+ SDSQS I L KN FH RTKHID+R+HFIR ++ ++ L K+ N
Sbjct: 36 ELGFIQEKTVLHSDSQSAIHLAKNSTFHSRTKHIDLRYHFIRSLLEDEVLTLRKILGSKN 95
Query: 182 PADMGTKCLPLSKFKTC 232
PADM TK + K + C
Sbjct: 96 PADMLTKVVTTEKLRLC 112