BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00045536
         (1536 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo...   372   e-112
gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposo...   364   e-112
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   368   e-112
gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposo...   369   e-111
gb|KYP34165.1| Copia protein [Cajanus cajan]                          347   e-110
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   364   e-109
gb|KYP42777.1| Retrovirus-related Pol polyprotein from transposo...   341   e-109
gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposo...   343   e-109
gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposo...   342   e-108
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   354   e-108
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   354   e-106
gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposo...   335   e-105
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   353   e-105
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo...   348   e-104
ref|XP_008350549.1| PREDICTED: uncharacterized protein LOC103413...   352   e-104
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo...   348   e-104
gb|KYP67571.1| Retrovirus-related Pol polyprotein from transposo...   328   e-104
gb|KYP51541.1| Retrovirus-related Pol polyprotein from transposo...   326   e-104
emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]   340   e-103
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo...   347   e-103

>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  372 bits (954), Expect = e-112
 Identities = 218/514 (42%), Positives = 301/514 (58%), Gaps = 14/514 (2%)
 Frame = -2

Query: 1529 KGYKVLLPNNKIIVTRDVLFDESTFPY------ATSDSSNDTIFSDFCDPNNRFSPLLTM 1368
            KGYK L  + +I +++DV+F+E  FPY      ATSDS                 P  ++
Sbjct: 760  KGYKCLSKSGRIYISKDVIFNEGRFPYHDLFVTATSDSI----------------PATSV 803

Query: 1367 SDTPSQILSI-PNAQDFVRPQLSTTNTDCDSPTVATPXXXXXXSHGTQHGDHTTIEFPID 1191
            S  PS + S  P++   V P + T +   +S   + P      S  +     ++      
Sbjct: 804  STLPSLVCSHNPSSSTLVSPTVPTNSGSSES-NFSLPSMPDNSSTNSPPASSSSPSLSAP 862

Query: 1190 DTQIPDIPNEIVYGLLLSLLQVHILWSQGQMMAFTSRRSSLPIFIAWMSLQHIFKPSKYH 1011
               I  +      G+L   L   +L S  +     S  +  P +++ M  +         
Sbjct: 863  PLNIHPMITRSKNGILQPRLNPTLLLSNVEPKTVKSALTD-PHWLSAMQAE--------- 912

Query: 1010 NGGLQWSWNIQPCKKNQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKGYS 831
                     +     N TW L  LP G+K+IGC+WVF+LK + DGSI +YKARL+AKG+ 
Sbjct: 913  ---------LTALHDNHTWTLVDLPPGRKSIGCKWVFRLKENPDGSINKYKARLVAKGFH 963

Query: 830  QLAGLDYSETFSPVIKPVTIRVVLSIDVSHSW-----SVDNAFLNGDIDHELYMTQPPGF 666
            Q  G+D+SETFSPV+KPVTIR+VLS+ V+  W      ++NAFLNG ++ ++YM+QPPGF
Sbjct: 964  QQPGVDFSETFSPVVKPVTIRIVLSLAVTFQWPLRQLDINNAFLNGMLEEDIYMSQPPGF 1023

Query: 665  -EQGGQHTVCKLKKSLYGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFIIV 489
             E   +H VCKL KSLYGLKQA RAW  + TSVL   GF  S+ D  L+      + + +
Sbjct: 1024 IEPNSKHLVCKLHKSLYGLKQAPRAWFDRLTSVLLKLGFHKSKCDPSLFIFSTPSAIVYM 1083

Query: 488  LAYVDDIIVTGNNDKCMQIFIEQLHQQFSLKDLGSLNHFLGIEVTYASNG-ILLNQAKYI 312
            L YVDDII+TGN+   MQ FI  LH  FSLKDLG+L++FLGIEV   SNG +LL+Q KYI
Sbjct: 1084 LIYVDDIILTGNSSSLMQQFINHLHATFSLKDLGTLDYFLGIEVKSLSNGRLLLSQHKYI 1143

Query: 311  QNILGKVGMLQAKEMSTPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYSI 132
             ++L KV M  +K +STPMI    L+K  G    D T YRS+VGALQY TITRP++++S+
Sbjct: 1144 SDLLTKVKMEDSKGISTPMIGGQQLAK-TGTLFNDPTLYRSVVGALQYATITRPEIAFSV 1202

Query: 131  NRVSQYMHNPLDTHWKAVKRILRYLAGTIDHGIM 30
            N+VSQ+M +P++ HWK VKRILRYL GT+ HG++
Sbjct: 1203 NKVSQFMCSPMEEHWKVVKRILRYLKGTLKHGLV 1236


>gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1007

 Score =  364 bits (935), Expect = e-112
 Identities = 208/529 (39%), Positives = 301/529 (56%), Gaps = 20/529 (3%)
 Frame = -2

Query: 1529 KGYKVLLPNNKIIVTRDVLFDESTFPYATSDSSNDTIFSDFCDPNNRFSPLLTMSDTPSQ 1350
            KGY  L P+ K  ++R+V F E+ FP  T                N F P +  S+    
Sbjct: 353  KGYICLSPSGKRYISRNVKFFETVFPCQTQP--------------NPFIPTIRSSN---- 394

Query: 1349 ILSIPNAQDFVRPQLSTTNTDCDSPTVATPXXXXXXSHGTQHGDHTTIEFPIDDTQIPDI 1170
              S+ N  D     + T+++  +  + + P               TT    ++DT    +
Sbjct: 395  --SVHNNSDLSHLTVLTSSSQNNHHSNSNPIV-------------TTTALSLNDTNPAAV 439

Query: 1169 PNEIVYGLLLSLLQVHILWSQGQMMAFTSRRSSLPIF--------IAWMSLQHIFKPSKY 1014
                     + +++  +  S  Q     + RS   IF        +   S  H  +P+  
Sbjct: 440  AT-------VPIIEPGVSSSGPQNAHLMTTRSKAGIFKPKTYAAALVKSSYDHTIEPNTV 492

Query: 1013 HNGGLQWSW------NIQPCKKNQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKAR 852
                 +  W        Q    NQTW L  LP+G K IGC+W+FK K + DGS  R+KAR
Sbjct: 493  KEALAKPEWLKAMKDEYQALVSNQTWSLVDLPIGYKPIGCKWIFKSKYNPDGSFQRHKAR 552

Query: 851  LIAKGYSQLAGLDYSETFSPVIKPVTIRVVLSIDVSHSW-----SVDNAFLNGDIDHELY 687
            L+AKGY+Q  GLD+SETFSPV+KP T+R+VLS+ +++ W      ++N FL+GD+   +Y
Sbjct: 553  LVAKGYNQKPGLDFSETFSPVVKPTTVRIVLSLAITNQWPIHQIDINNVFLHGDLQESVY 612

Query: 686  MTQPPGFEQGGQHTVCKLKKSLYGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQK 507
            M+QPPGF    +  VCKL K++YGLKQA R+W  K ++ L   GF  +++D+ L+ R  K
Sbjct: 613  MSQPPGFNTQHKDKVCKLNKAIYGLKQAPRSWYCKLSNTLIQMGFHSTKSDTSLFVRFSK 672

Query: 506  DSFIIVLAYVDDIIVTGNNDKCMQIFIEQLHQQFSLKDLGSLNHFLGIEVTYASNG-ILL 330
             + +++L YVDDII+TGN+ + ++  I  LH +FSLKDLGSL++FLG+EVT    G +LL
Sbjct: 673  TTTLMLLIYVDDIIITGNSKEEIRSVISFLHDKFSLKDLGSLHYFLGVEVTTTKEGNLLL 732

Query: 329  NQAKYIQNILGKVGMLQAKEMSTPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRP 150
             Q KY++ IL K  M  +    TPM++N  L++N    V D +FYRSIVGALQY TITRP
Sbjct: 733  TQTKYLREILHKASMSDSTPQPTPMLANLKLTENETTSVPDPSFYRSIVGALQYLTITRP 792

Query: 149  DVSYSINRVSQYMHNPLDTHWKAVKRILRYLAGTIDHGIMIKADSPISL 3
            DVS+++N+V QYMH P + HWKAVKRILRYL GTI HG++I+ +  ++L
Sbjct: 793  DVSFAVNKVCQYMHCPQEHHWKAVKRILRYLQGTIHHGLLIQKNKQLNL 841


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  368 bits (945), Expect = e-112
 Identities = 227/540 (42%), Positives = 307/540 (56%), Gaps = 31/540 (5%)
 Frame = -2

Query: 1529 KGYKVLLPNNKIIVTRDVLFDESTFPYATSDSSNDTIFSDF-----CDPNNRFSPLLTMS 1365
            KGYK L    ++ ++R V+FDE+ FP+A        I S       C P      L  +S
Sbjct: 576  KGYKCLNQQGRMFISRSVVFDETRFPFADRLQKPVQIVSHSTVGLPCIP--LVKNLEPJS 633

Query: 1364 DTPSQILSIPNAQ-----------DFVRPQLSTTNTDCDSPTVATPXXXXXXSHGTQHGD 1218
             +PS  L   +AQ           D    Q   +NTD  S            S    +  
Sbjct: 634  VSPSLSLPTSSAQSSHQLDENLGSDIRSIQXDFSNTDSSSTVPILXESASIXSSSNLYAL 693

Query: 1217 HTTIEFPIDDTQIPDIPNEIVYGLLLSLLQVHILWSQGQMMAFTSRRSSLPIFIAWMSLQ 1038
              TI    +     D PNE +    ++  Q      Q   M   S+       +  + L 
Sbjct: 694  PGTIPLSTNS----DEPNESINTRPVTXPQ------QPHHMVTRSKNGIFKPXVYTVDL- 742

Query: 1037 HIFKPSKYHNGGLQWSWN------IQPCKKNQTWDLCSLPVGKKTIGCEWVFKLKRHADG 876
            ++ +P+ +        W        +   KN+TW L SLP  + ++GC WVFKLKR+ DG
Sbjct: 743  NVEEPNTFQEAISHPKWKEAMDEEFRALMKNKTWSLVSLPTNRTSVGCRWVFKLKRNPDG 802

Query: 875  SIARYKARLIAKGYSQLAGLDYSETFSPVIKPVTIRVVLSIDVSHSW-----SVDNAFLN 711
            S++RYKARL+AKGYSQ+ G D+ ETFSPV+KP TIRVVL+I VS SW      V+NAFLN
Sbjct: 803  SVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVSQSWCIRQLDVNNAFLN 862

Query: 710  GDIDHELYMTQPPGFE---QGGQHTVCKLKKSLYGLKQASRAWNSKFTSVLKSFGFTVSQ 540
            G++  E+YM QPPGF+      Q  VCKL K+LYGLKQA RAW  K    L+ FGF+ ++
Sbjct: 863  GELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGLKQAPRAWFDKLKISLQQFGFSSTK 922

Query: 539  ADSYLYYRRQKDSFIIVLAYVDDIIVTGNNDKCMQIFIEQLHQQFSLKDLGSLNHFLGIE 360
            +D  L+ R    S + VL YVDDI+VTG++ + +   I +L   FSLKDLG L++FLGIE
Sbjct: 923  SDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGLFSLKDLGELSYFLGIE 982

Query: 359  VTY-ASNGILLNQAKYIQNILGKVGMLQAKEMSTPMISNPPLSKNVGQPVEDATFYRSIV 183
            V   A  G+ L+Q KYIQ++L K  M  AK + TPM+S   LS  +G P+++   YRS+V
Sbjct: 983  VKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPMLSGLKLSAGMGDPIDNVFEYRSVV 1042

Query: 182  GALQYCTITRPDVSYSINRVSQYMHNPLDTHWKAVKRILRYLAGTIDHGIMIKADSPISL 3
            GALQY TITRP++++S+N+V Q+M  PLDTHWKAVKRILRYL GT D GI++K    ++L
Sbjct: 1043 GALQYITITRPEIAFSVNKVCQFMQKPLDTHWKAVKRILRYLNGTTDLGIVLKPSETMNL 1102


>gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1403

 Score =  369 bits (946), Expect = e-111
 Identities = 216/512 (42%), Positives = 308/512 (60%), Gaps = 10/512 (1%)
 Frame = -2

Query: 1529 KGYKVLLPNNKIIVTRDVLFDESTFPYATSDSSNDTI-FSDFCDPNNRFSPLLTMSDTPS 1353
            KGYK    N KII++R+V+FDE TFP  +  ++N+    S    P     P+ ++   PS
Sbjct: 740  KGYKCFTTNGKIIISRNVVFDEDTFPGPSYFNTNNVAGLSSSHSPQ----PVPSIHVLPS 795

Query: 1352 QILSIPNAQDFVRPQLSTTNTDCDSPTVATPXXXXXXSHGTQHGDHTTIEFPIDDTQIPD 1173
            Q L+ PN+   V    S   +  DS   +T          +Q    T+   P     I  
Sbjct: 796  QSLA-PNSATTVPLVSSIDESLQDSQLTSTTDT-------SQDNLITSSSQPNPQPIITT 847

Query: 1172 IPNEIVYGLLLSLLQVHILWSQGQMMAFTSRR---SSLPIFIAWMSLQHIFKPSKYHNGG 1002
            +P+        +    H + ++ ++  F  +    +S PI +A          +K+    
Sbjct: 848  VPDPASPATRTT--NQHPMITRAKIGVFKPKAFLATSEPISVAQAL------DNKHWKQA 899

Query: 1001 LQWSWNIQPCKKNQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKGYSQLA 822
            +Q  +N     KN TWDL SLP G+  I C+W+FK K   DGSI R+KARL+A+G+SQ  
Sbjct: 900  MQDEYNA--LLKNHTWDLVSLPPGRTAITCKWIFKNKYKQDGSILRHKARLVARGFSQQQ 957

Query: 821  GLDYSETFSPVIKPVTIRVVLSIDVSHSW-----SVDNAFLNGDIDHELYMTQPPGFEQG 657
            GLDY++TFSPV+KPV+IR+VL++ VS  W      VDNAFLNGD+  ++YM QP GF  G
Sbjct: 958  GLDYTDTFSPVVKPVSIRIVLALAVSKGWPIHQIDVDNAFLNGDLKEDIYMLQPQGFHNG 1017

Query: 656  GQHTVCKLKKSLYGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFIIVLAYV 477
              +TVCKL+K+LYGLKQA RAW  K T +L   GF  +++DS L+    K + I +L YV
Sbjct: 1018 APNTVCKLRKALYGLKQAPRAWFQKLTLILLQLGFKQARSDSSLFTFTSKVTSIYILIYV 1077

Query: 476  DDIIVTGNNDKCMQIFIEQLHQQFSLKDLGSLNHFLGIEV-TYASNGILLNQAKYIQNIL 300
            DDII+T N+   +Q  I  LH+ F LKDLGSL++FLGIEV +  + GI L+Q KY+++IL
Sbjct: 1078 DDIIITSNSPAAIQTLISTLHRFFPLKDLGSLHYFLGIEVNSDGAGGIHLSQTKYLKDIL 1137

Query: 299  GKVGMLQAKEMSTPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYSINRVS 120
             K+ M  AK + TPM  +  L+ +      D + YRS++GALQY TITRPD++Y++N++ 
Sbjct: 1138 DKLNMSNAKPVKTPMAPSLKLTNDGTAVCPDPSLYRSVIGALQYLTITRPDIAYTVNKLC 1197

Query: 119  QYMHNPLDTHWKAVKRILRYLAGTIDHGIMIK 24
            Q+MH+PL++HWKAVKR+LRYL GT+ HG+  K
Sbjct: 1198 QFMHHPLESHWKAVKRLLRYLQGTLQHGLHYK 1229


>gb|KYP34165.1| Copia protein [Cajanus cajan]
          Length = 542

 Score =  347 bits (889), Expect = e-110
 Identities = 168/321 (52%), Positives = 229/321 (71%), Gaps = 6/321 (1%)
 Frame = -2

Query: 968  KNQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKGYSQLAGLDYSETFSPV 789
            KN TWDL SLP  +K I C+W+FK K   DGSI R+KARL+A+G++Q  GLDY++TFSPV
Sbjct: 46   KNCTWDLVSLPPDRKAITCKWIFKNKYSQDGSILRHKARLVARGFNQQPGLDYTDTFSPV 105

Query: 788  IKPVTIRVVLSIDVSHSW-----SVDNAFLNGDIDHELYMTQPPGFEQGGQHTVCKLKKS 624
            ++PV+IRVVL+I VS  W      VDNAFLNGD+  E+YM QP GF QG  +TVCKL+K+
Sbjct: 106  VRPVSIRVVLAIAVSKGWPIHQIDVDNAFLNGDLKEEIYMLQPQGFHQGSPNTVCKLRKA 165

Query: 623  LYGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFIIVLAYVDDIIVTGNNDK 444
            +YGLKQA RAW  K T  L   GF  +++D+ L+    + + I +L YVDD+I+T N+  
Sbjct: 166  IYGLKQAPRAWFQKLTLTLFRLGFIQAKSDNSLFISTSRTTSIYILVYVDDVIITSNSAT 225

Query: 443  CMQIFIEQLHQQFSLKDLGSLNHFLGIEV-TYASNGILLNQAKYIQNILGKVGMLQAKEM 267
             ++  I+ LHQ F LKDLG L+HFLGIEV +  + G+ L+Q +Y+ +IL ++ M  A+ +
Sbjct: 226  AIRGLIQALHQYFPLKDLGRLHHFLGIEVHSDNAGGVHLSQTRYVTDILDRLNMSNARPV 285

Query: 266  STPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYSINRVSQYMHNPLDTHW 87
             TPM     L+ +  +  +D + YRSIVGALQY TITRPD++Y++N++ Q+MHNPLD HW
Sbjct: 286  KTPMAPASKLTNDGTEACQDPSQYRSIVGALQYLTITRPDIAYTVNKLCQFMHNPLDVHW 345

Query: 86   KAVKRILRYLAGTIDHGIMIK 24
            KA KR+LRYL GT+ HG+  K
Sbjct: 346  KATKRLLRYLKGTLHHGLHYK 366


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  364 bits (935), Expect = e-109
 Identities = 214/516 (41%), Positives = 287/516 (55%), Gaps = 11/516 (2%)
 Frame = -2

Query: 1529 KGYKVLLPNNKIIVTRDVLFDESTFPYATSDSSNDTIFSDFCD----PNNRFSPLLTMSD 1362
            KGYK L PN  I+++RDV+FDE  FP+A   S      S        P     PL+ +  
Sbjct: 764  KGYKCLSPNGNILISRDVIFDEXAFPFAQLQSQKQXTSSFSSSXTSLPCQTSLPLMVLPS 823

Query: 1361 TPSQILSIPNAQDFVRPQLSTTNTDCDSP-TVATPXXXXXXSHGTQHGDHTTIEFPIDDT 1185
            + S   S P     + P  S  N     P + A P         ++ G      + I  T
Sbjct: 824  STSCSTSSPTNPS-IFPATSNHNVASQXPPSSAPPFPSHHMITRSKXGIFKPKAYLISTT 882

Query: 1184 QIPDIPNEIVYGLLLSLLQVHILWSQGQMMAFTSRRSSLPIFIAWMSLQHIFKPSKYHNG 1005
                 P  +   L LS       W Q    A T    +L                     
Sbjct: 883  -----PTSVPEALQLSH------WKQ----AMTDEYLAL--------------------- 906

Query: 1004 GLQWSWNIQPCKKNQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKGYSQL 825
                        +N TWDL   P  +K IGC+WVFK+K + DG+I +YKARL+AKG+ Q+
Sbjct: 907  -----------LRNNTWDLVPPPTDRKLIGCKWVFKVKENXDGTINKYKARLVAKGFHQI 955

Query: 824  AGLDYSETFSPVIKPVTIRVVLSIDVSHSWSV-----DNAFLNGDIDHELYMTQPPGF-E 663
            AG D++ETFSPV+KP TIR+VL+I ++  W V     +NAFLNGD+  +++M QP GF +
Sbjct: 956  AGFDFNETFSPVVKPTTIRIVLTIALNLQWKVRQLDVNNAFLNGDLHEDIFMHQPQGFID 1015

Query: 662  QGGQHTVCKLKKSLYGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFIIVLA 483
                + VCKL KSLYGLKQA RAW  K    L   GF+ +++D  L+          +L 
Sbjct: 1016 PVNPNYVCKLNKSLYGLKQAPRAWFEKLHQALGILGFSSTKSDQSLFINITPTHSTYILV 1075

Query: 482  YVDDIIVTGNNDKCMQIFIEQLHQQFSLKDLGSLNHFLGIEVTYASNGILLNQAKYIQNI 303
            YVDDI++TGNND+ +Q  I QL+ QF+LKDLG +++FLGI+V + S G+ L+QAKYI N+
Sbjct: 1076 YVDDILITGNNDQFVQHVITQLNNQFALKDLGDIDYFLGIQVKHTSAGMHLSQAKYISNL 1135

Query: 302  LGKVGMLQAKEMSTPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYSINRV 123
            L K  ML  K + TPM+SN  LS +   P  +   YRS VGALQY TITRPD++YS+NRV
Sbjct: 1136 LQKTKMLHVKSVPTPMVSNQSLSNSGSAPFSNTQLYRSTVGALQYATITRPDITYSVNRV 1195

Query: 122  SQYMHNPLDTHWKAVKRILRYLAGTIDHGIMIKADS 15
             Q+M +PL  HWKAVKRILRYLAGT+ HG+ ++ +S
Sbjct: 1196 CQFMQDPLTAHWKAVKRILRYLAGTLHHGLHLQHNS 1231


>gb|KYP42777.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 459

 Score =  341 bits (875), Expect = e-109
 Identities = 162/318 (50%), Positives = 230/318 (72%), Gaps = 6/318 (1%)
 Frame = -2

Query: 968  KNQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKGYSQLAGLDYSETFSPV 789
            KNQTWDL +LP  ++ +GC+WVF++K +ADGSI +YKARL+AKG+ Q+ G D+ ETFSPV
Sbjct: 50   KNQTWDLVTLPPNRQVVGCKWVFRIKENADGSINKYKARLVAKGFHQVPGFDFHETFSPV 109

Query: 788  IKPVTIRVVLSIDVSHSWS-----VDNAFLNGDIDHELYMTQPPGFEQGGQHTVCKLKKS 624
            IKP T+R++L++ +++ W      V+NAFLNG ++  ++M QPPGFE   +  VC+L K+
Sbjct: 110  IKPTTLRIILTLALTNGWDLLHLDVNNAFLNGLLEETVFMVQPPGFESADKSLVCRLNKA 169

Query: 623  LYGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFIIVLAYVDDIIVTGNNDK 444
            LYGLKQA R W  +  + L  FGF+  ++D  L+    +   + +L YVDDII+TG++  
Sbjct: 170  LYGLKQAPRQWFDRLKTTLLQFGFSACKSDPSLFTYTLQQQTVYLLVYVDDIILTGSSQS 229

Query: 443  CMQIFIEQLHQQFSLKDLGSLNHFLGIEVTYASN-GILLNQAKYIQNILGKVGMLQAKEM 267
             +Q    QL+ +F+LK LG L++FLGIEV Y ++  IL+ Q+KYI+++L K  M +A+ +
Sbjct: 230  LIQQLTTQLNARFALKQLGLLDYFLGIEVKYFTDKSILMTQSKYIRDLLHKTKMAEAQPI 289

Query: 266  STPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYSINRVSQYMHNPLDTHW 87
            S+PM+S+  LSKN      D T +RS+VGALQY T+TRPD+SYS+N+V Q+M  PLDTHW
Sbjct: 290  SSPMVSSCKLSKNGNDLFHDPTLFRSVVGALQYATLTRPDISYSVNKVCQFMAQPLDTHW 349

Query: 86   KAVKRILRYLAGTIDHGI 33
             AVKRILRYL GTI HG+
Sbjct: 350  IAVKRILRYLKGTISHGL 367


>gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 539

 Score =  343 bits (880), Expect = e-109
 Identities = 167/331 (50%), Positives = 235/331 (70%), Gaps = 9/331 (2%)
 Frame = -2

Query: 968  KNQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKGYSQLAGLDYSETFSPV 789
            KN TW L  LP  +  IGC+WVF++K ++DGS+ RYKARL+AKG+ Q  G D++ETFSP+
Sbjct: 49   KNNTWTLVQLPPDRNAIGCKWVFRIKENSDGSVNRYKARLVAKGFLQQPGFDFNETFSPI 108

Query: 788  IKPVTIRVVLSIDVSHSWS-----VDNAFLNGDIDHELYMTQPPGFEQGGQHTVCKLKKS 624
            IKPVTIR++L++ +S+ W      V+NAFLNG ++  +YM QPPGFE      VCKL K+
Sbjct: 109  IKPVTIRLILTLAISNHWDIHQLDVNNAFLNGSLNETVYMQQPPGFEVPDSTLVCKLNKA 168

Query: 623  LYGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFIIVLAYVDDIIVTGNNDK 444
            LYGLKQA R W  +    L  FGF  S+ D  L+    + + + +L YVDDII+TGN+ +
Sbjct: 169  LYGLKQAPRQWFERLQYTLLQFGFKASKCDPSLFTYHMQSNIVYLLVYVDDIIITGNSFQ 228

Query: 443  CMQIFIEQLHQQFSLKDLGSLNHFLGIEVTYASNG-ILLNQAKYIQNILGKVGMLQAKEM 267
              Q  I+QL+  FSLK LG L++FLGIEV +  NG +LL Q+KYI+++L +  ML+A  +
Sbjct: 229  FTQQLIDQLNSIFSLKQLGKLDYFLGIEVRHLQNGSVLLTQSKYIRDLLQRTNMLEANAI 288

Query: 266  STPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYSINRVSQYMHNPLDTHW 87
            S+PM+S+  LSK+    + D+TFYRS+VGALQY TITRP++S+++N+V Q+M +PL++HW
Sbjct: 289  SSPMVSSCKLSKHGSDTLADSTFYRSVVGALQYATITRPELSFAVNKVCQFMAHPLESHW 348

Query: 86   KAVKRILRYLAGTIDHGIMI---KADSPISL 3
             AVKRILRYL GT+ +G+ +   +   P SL
Sbjct: 349  NAVKRILRYLKGTMFYGLHLQPARVHQPFSL 379


>gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 538

 Score =  342 bits (878), Expect = e-108
 Identities = 168/330 (50%), Positives = 234/330 (70%), Gaps = 9/330 (2%)
 Frame = -2

Query: 965  NQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKGYSQLAGLDYSETFSPVI 786
            N TW L SLP  K  IGC+WVF++K ++DG++ +YKARL+AKG+ Q  G DY+ETFSPV+
Sbjct: 51   NGTWTLVSLPPNKTAIGCKWVFRIKENSDGTVNKYKARLVAKGFHQQFGSDYNETFSPVV 110

Query: 785  KPVTIRVVLSIDVSHSWS-----VDNAFLNGDIDHELYMTQPPGFEQGGQHTVCKLKKSL 621
            KPVTIR++L++ ++H WS     V+NAFLNG++  E+YM+QPPGFE   +  VCKL K++
Sbjct: 111  KPVTIRLILTLALTHHWSIQQLDVNNAFLNGNLQEEVYMSQPPGFESSDKTLVCKLHKAI 170

Query: 620  YGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFIIVLAYVDDIIVTGNNDKC 441
            YGLKQA RAW  K  + L    F +S+ D  L+     ++ I +L YVDDII+TGNN   
Sbjct: 171  YGLKQAPRAWFDKLKTTLFQLNFQISKCDPSLFVYSHDNNVIYILVYVDDIIITGNNSST 230

Query: 440  MQIFIEQLHQQFSLKDLGSLNHFLGIEVTYASNGIL-LNQAKYIQNILGKVGMLQAKEMS 264
            +Q  I QL+  FSLKDLG L+ FLGIEV   ++G L L Q+KYI+++L +  M  +  +S
Sbjct: 231  LQNIIAQLNSAFSLKDLGRLDFFLGIEVKSNTDGSLTLTQSKYIRDLLNRTNMENSNPIS 290

Query: 263  TPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYSINRVSQYMHNPLDTHWK 84
            +PM+S   LS+   +   D T YRS+VGALQY TITRP++S+S+N+V Q+M NPL+ HW 
Sbjct: 291  SPMVSGCKLSRTGSEKFLDVTLYRSVVGALQYATITRPEISFSVNKVCQFMSNPLEQHWS 350

Query: 83   AVKRILRYLAGTIDHGIMIK---ADSPISL 3
            AVKRILRYL GT+  G+ ++   ++SP+S+
Sbjct: 351  AVKRILRYLKGTMFLGLHLQPAPSNSPLSI 380


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1073

 Score =  354 bits (909), Expect = e-108
 Identities = 208/518 (40%), Positives = 294/518 (56%), Gaps = 10/518 (1%)
 Frame = -2

Query: 1529 KGYKVLLPNNKIIVTRDVLFDESTFPYATSDSSNDTIFSDFCDPNNRFSPLLTMSDTPSQ 1350
            KGYK L  + ++ +++DV+F+E+ FPY    SS     S   D     S  LT++ TP+ 
Sbjct: 423  KGYKCLAADGRLYISKDVVFNETKFPYKDLFSS-----SKASDSQLPISVPLTINPTPTP 477

Query: 1349 ILSIPNAQDFVRPQLSTTN----TDCDSPTVATPXXXXXXSHGTQHGDHTTIEFPIDDTQ 1182
                 +A     P   TT+    +D  SP  A        S  T      +    I    
Sbjct: 478  ----THATRLTSPNPPTTSPSLISDSYSPNTAAHTSPSTLSIPTSSNLEPSSSPIIHPHN 533

Query: 1181 IPDIPNEIVYGLLLSLLQVHILWSQGQMMAFTSRRSSLPIFIAWMSLQHIFKPSKYHNGG 1002
            +  +      G++   LQ  +L +Q +    T +  S P + A M  ++           
Sbjct: 534  VHPMTTRAKDGIVKPRLQPTLLLTQVEPKT-TKQALSNPTWSAAMQTEY----------- 581

Query: 1001 LQWSWNIQPCKKNQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKGYSQLA 822
                        N TW L  LP  +  IGC+WVF++K + +GS+ +YKARL+AKG++Q  
Sbjct: 582  -------NALLHNNTWSLVPLPPHRTAIGCKWVFRVKENPNGSVQKYKARLVAKGFNQQF 634

Query: 821  GLDYSETFSPVIKPVTIRVVLSIDVSHSW-----SVDNAFLNGDIDHELYMTQPPGFEQG 657
            G DY ETFSPVIKPVT+R++L++ ++H W      V+NAFLNG ++ E+YM QPPGFE  
Sbjct: 635  GFDYHETFSPVIKPVTVRLILTLALTHRWPIQQLDVNNAFLNGTLEEEVYMQQPPGFEAS 694

Query: 656  GQHTVCKLKKSLYGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFIIVLAYV 477
             ++ VCKL K++YGLKQA RAW  K  S L    F  S+ D  L+   Q ++ I +L YV
Sbjct: 695  DKNLVCKLHKAIYGLKQAPRAWFDKLKSTLLQLNFYASKCDPSLFIYSQGNNVIYILVYV 754

Query: 476  DDIIVTGNNDKCMQIFIEQLHQQFSLKDLGSLNHFLGIEVTYASNG-ILLNQAKYIQNIL 300
            DDII+TGNN   +   + QLH  FSLKDLG L+ FLGIEV    +G ++L Q+KYI+++L
Sbjct: 755  DDIIITGNNSSILHTLVSQLHSIFSLKDLGDLDFFLGIEVKSQPDGSLILTQSKYIRDLL 814

Query: 299  GKVGMLQAKEMSTPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYSINRVS 120
             +  M  +K +S+PMIS   LSK   +   DA+ YRS+VGALQY TITRP++S+S+N+V 
Sbjct: 815  NRTDMEGSKPISSPMISGSKLSKVGSEDFLDASLYRSVVGALQYATITRPEISFSVNKVC 874

Query: 119  QYMHNPLDTHWKAVKRILRYLAGTIDHGIMIKADSPIS 6
            Q+M +PL  HW AVKRILRYL GT   G+ ++  S  S
Sbjct: 875  QFMSHPLTHHWAAVKRILRYLKGTTSWGLRLQPASSSS 912


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  354 bits (909), Expect = e-106
 Identities = 208/518 (40%), Positives = 294/518 (56%), Gaps = 10/518 (1%)
 Frame = -2

Query: 1529 KGYKVLLPNNKIIVTRDVLFDESTFPYATSDSSNDTIFSDFCDPNNRFSPLLTMSDTPSQ 1350
            KGYK L  + ++ +++DV+F+E+ FPY    SS     S   D     S  LT++ TP+ 
Sbjct: 758  KGYKCLAADGRLYISKDVVFNETKFPYKDLFSS-----SKASDSQLPISVPLTINPTPTP 812

Query: 1349 ILSIPNAQDFVRPQLSTTN----TDCDSPTVATPXXXXXXSHGTQHGDHTTIEFPIDDTQ 1182
                 +A     P   TT+    +D  SP  A        S  T      +    I    
Sbjct: 813  ----THATRLTSPNPPTTSPSLISDSYSPNTAAHTSPSTLSIPTSSNLEPSSSPIIHPHN 868

Query: 1181 IPDIPNEIVYGLLLSLLQVHILWSQGQMMAFTSRRSSLPIFIAWMSLQHIFKPSKYHNGG 1002
            +  +      G++   LQ  +L +Q +    T +  S P + A M  ++           
Sbjct: 869  VHPMTTRAKDGIVKPRLQPTLLLTQVEPKT-TKQALSNPTWSAAMQTEY----------- 916

Query: 1001 LQWSWNIQPCKKNQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKGYSQLA 822
                        N TW L  LP  +  IGC+WVF++K + +GS+ +YKARL+AKG++Q  
Sbjct: 917  -------NALLHNNTWSLVPLPPHRTAIGCKWVFRVKENPNGSVQKYKARLVAKGFNQQF 969

Query: 821  GLDYSETFSPVIKPVTIRVVLSIDVSHSW-----SVDNAFLNGDIDHELYMTQPPGFEQG 657
            G DY ETFSPVIKPVT+R++L++ ++H W      V+NAFLNG ++ E+YM QPPGFE  
Sbjct: 970  GFDYHETFSPVIKPVTVRLILTLALTHRWPIQQLDVNNAFLNGTLEEEVYMQQPPGFEAS 1029

Query: 656  GQHTVCKLKKSLYGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFIIVLAYV 477
             ++ VCKL K++YGLKQA RAW  K  S L    F  S+ D  L+   Q ++ I +L YV
Sbjct: 1030 DKNLVCKLHKAIYGLKQAPRAWFDKLKSTLLQLNFYASKCDPSLFIYSQGNNVIYILVYV 1089

Query: 476  DDIIVTGNNDKCMQIFIEQLHQQFSLKDLGSLNHFLGIEVTYASNG-ILLNQAKYIQNIL 300
            DDII+TGNN   +   + QLH  FSLKDLG L+ FLGIEV    +G ++L Q+KYI+++L
Sbjct: 1090 DDIIITGNNSSILHTLVSQLHSIFSLKDLGDLDFFLGIEVKSQPDGSLILTQSKYIRDLL 1149

Query: 299  GKVGMLQAKEMSTPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYSINRVS 120
             +  M  +K +S+PMIS   LSK   +   DA+ YRS+VGALQY TITRP++S+S+N+V 
Sbjct: 1150 NRTDMEGSKPISSPMISGSKLSKVGSEDFLDASLYRSVVGALQYATITRPEISFSVNKVC 1209

Query: 119  QYMHNPLDTHWKAVKRILRYLAGTIDHGIMIKADSPIS 6
            Q+M +PL  HW AVKRILRYL GT   G+ ++  S  S
Sbjct: 1210 QFMSHPLTHHWAAVKRILRYLKGTTSWGLRLQPASSSS 1247


>gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 539

 Score =  335 bits (858), Expect = e-105
 Identities = 163/330 (49%), Positives = 232/330 (70%), Gaps = 9/330 (2%)
 Frame = -2

Query: 965  NQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKGYSQLAGLDYSETFSPVI 786
            N TWDL SLP  +K +GC+WVF++K +ADGSI + KARL+AKG+ Q+ G D+ ETFSPVI
Sbjct: 51   NHTWDLVSLPSDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVI 110

Query: 785  KPVTIRVVLSIDVSHSWS-----VDNAFLNGDIDHELYMTQPPGFEQGGQHTVCKLKKSL 621
            KP+TIR++L++ ++++W+     V+NAFLNG ++  +YM QPPGFE G +  VCKL K+L
Sbjct: 111  KPITIRIILTLALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFEAGDKSLVCKLNKAL 170

Query: 620  YGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFIIVLAYVDDIIVTGNNDKC 441
            YGLKQA R W +K    L  FGF  S+ D  L+  + +   I +L YVDDII+TG++   
Sbjct: 171  YGLKQAPRQWFNKLKLTLTRFGFQASKCDPSLFQYQHQTHTIFILVYVDDIIITGSSSLL 230

Query: 440  MQIFIEQLHQQFSLKDLGSLNHFLGIEVTY-ASNGILLNQAKYIQNILGKVGMLQAKEMS 264
            +Q    QL   FSLK LGSL++FLGIEV +     ++L Q+KYI+++L K  + +A    
Sbjct: 231  IQQITNQLDSIFSLKQLGSLDYFLGIEVKHLPDKSLVLTQSKYIRDLLFKTNLAEAHGAP 290

Query: 263  TPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYSINRVSQYMHNPLDTHWK 84
            +PM SN  LS++      D TF+RS+VGALQY T+TRP++S+++N+V Q+M  PLD+HW 
Sbjct: 291  SPMFSNCKLSRSGNDFFHDPTFFRSVVGALQYATLTRPEISFAVNKVCQFMATPLDSHWV 350

Query: 83   AVKRILRYLAGTIDHGIMIK---ADSPISL 3
            AVKRIL+YL GT+ +G+ ++    + PISL
Sbjct: 351  AVKRILKYLKGTLSYGLHMQPAAVNGPISL 380


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  353 bits (905), Expect = e-105
 Identities = 200/526 (38%), Positives = 291/526 (55%), Gaps = 17/526 (3%)
 Frame = -2

Query: 1529 KGYKVLLPNNKIIVTRDVLFDESTFPYATSDSSNDTIFSDFCDPNNRFSPLLTMSDTPSQ 1350
            KGYK +  N ++ ++ DV+F+E++FPY+ +   +  + S      +  SP  +       
Sbjct: 781  KGYKCMSSNGRVYISHDVIFNETSFPYSKTIQVSSCLLSTVSPSTSHLSPSASPPVLSPT 840

Query: 1349 ILSIPNAQ-DFVRPQLSTTNTDCDSPTVATPXXXXXXSHGTQHGDHTTIEFPIDDTQIPD 1173
            +L  P +     RP     N     P            H     D T     +    +  
Sbjct: 841  MLPTPTSPISSARPISEMDNIVSTHP------------HAPNSADTTLTPAQVVSNPVAT 888

Query: 1172 IPNEIVYGLLLSLLQVHILWSQGQMMAFTSRRSS----LPIFIAWMSLQHIFKPSKYHNG 1005
                +V  +  + +   I           +R  S      IFIA      I +PS     
Sbjct: 889  PVQHVVSSIADASVTRTIAKDADNTHPMITRAKSGIVKPKIFIA-----AIREPSSVSAA 943

Query: 1004 GLQWSWN------IQPCKKNQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIA 843
              Q  W           ++N TW L  LP G++ IGC+WV+K K + DG++ +YKARL+A
Sbjct: 944  LQQDEWKKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVA 1003

Query: 842  KGYSQLAGLDYSETFSPVIKPVTIRVVLSIDVSHSWS-----VDNAFLNGDIDHELYMTQ 678
            KG+ Q AG D++ETFSPV+KP T+RVV +I +S +W+     V+NAFLNGD+  E++M Q
Sbjct: 1004 KGFHQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQ 1063

Query: 677  PPGF-EQGGQHTVCKLKKSLYGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDS 501
            P GF ++   + VC+L K+LYGLKQA RAW  K    L SFGF  +++D  L+ R   + 
Sbjct: 1064 PQGFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNH 1123

Query: 500  FIIVLAYVDDIIVTGNNDKCMQIFIEQLHQQFSLKDLGSLNHFLGIEVTYASNGILLNQA 321
               VL YVDDI+V G++   +   I QL+ +FSLKDLG +++FLGI+V++ +NG+ L+Q 
Sbjct: 1124 ITYVLVYVDDILVIGSDTAAITSLIAQLNSEFSLKDLGEVHYFLGIQVSHTNNGLHLSQT 1183

Query: 320  KYIQNILGKVGMLQAKEMSTPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVS 141
            KYI+++L K  M+  K   TP+ +   L    G PVED   YRS VGALQY TITRP++S
Sbjct: 1184 KYIRDLLQKTKMVHCKPARTPLPTGLKLRVGDGDPVEDLHGYRSTVGALQYVTITRPELS 1243

Query: 140  YSINRVSQYMHNPLDTHWKAVKRILRYLAGTIDHGIMIKADSPISL 3
            +S+N+V Q+M NP + HWK VKRILRYL GT+ HG+ +K  S + L
Sbjct: 1244 FSVNKVCQFMQNPTEEHWKVVKRILRYLQGTLQHGLHLKKSSNLDL 1289


>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1279

 Score =  348 bits (894), Expect = e-104
 Identities = 200/518 (38%), Positives = 296/518 (57%), Gaps = 9/518 (1%)
 Frame = -2

Query: 1529 KGYKVLLPNNKIIVTRDVLFDESTFPYATSDSSNDTIFSDFCDPNNRFSPLLTMSDTPSQ 1350
            KGYK L  + +I +++DV+F+E  FPY      + T     C   N  +P L+   T S 
Sbjct: 621  KGYKCLSSSGRIYISKDVIFNEHRFPYTDLFQPSLTQNVSPCQYFN-LNPDLSPPCTTST 679

Query: 1349 ILSIPNAQDFVRPQLSTTNTDCDSPTVATPXXXXXXSHGTQHGDHTTIEFPIDDTQIPDI 1170
            +LS        +P L +   D     + +       S  +       +  P   T    I
Sbjct: 680  VLS-------QQPPLPSQIGDSSVSIIPSVSSSQNVSPSSPESSSQNVSSPTSSTAPASI 732

Query: 1169 PNEIVYGLLLSLLQVHILWSQGQMMAFTSRRSSLPIFIAWMSLQHIFKPSKYHNGGLQWS 990
            P  I           H + ++ +   F + R    +F+A    + + +     N      
Sbjct: 733  PRTI---------NNHPMQTRSKS-GFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQ 782

Query: 989  WNIQPCKKNQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKGYSQLAGLDY 810
                    N TWDL SLP  +K +GC+WVF++K +ADGSI + KARL+AKG+ Q+ G D+
Sbjct: 783  QEYNALMLNHTWDLVSLPSDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDF 842

Query: 809  SETFSPVIKPVTIRVVLSIDVSHSWS-----VDNAFLNGDIDHELYMTQPPGFEQGGQHT 645
             ETFSPVIKP+TIR++L++ ++++W+     V+NAFLNG ++  +YM QPPGFE G +  
Sbjct: 843  HETFSPVIKPITIRIILTLALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFEAGDKSL 902

Query: 644  VCKLKKSLYGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFIIVLAYVDDII 465
            VCKL K+LYGLKQA R W +K    L  FGF  S+ D  L+  + +   I +L YVDDII
Sbjct: 903  VCKLNKALYGLKQAPRQWFNKLKLTLTRFGFQASKCDPSLFQYQHQTHTIFILVYVDDII 962

Query: 464  VTGNNDKCMQIFIEQLHQQFSLKDLGSLNHFLGIEVTY-ASNGILLNQAKYIQNILGKVG 288
            +TG++   +Q    QL   FSLK LGSL++FLGIEV +     ++L Q+KYI+++L K  
Sbjct: 963  ITGSSSLLIQQITNQLDSIFSLKQLGSLDYFLGIEVKHLPDKSLVLTQSKYIRDLLFKTN 1022

Query: 287  MLQAKEMSTPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYSINRVSQYMH 108
            + +A    +PM SN  LS++      D TF+RS+VGALQY T+TRP++S+++N+V Q+M 
Sbjct: 1023 LAEAHGAPSPMFSNCKLSRSGNDFFHDPTFFRSVVGALQYATLTRPEISFAVNKVCQFMA 1082

Query: 107  NPLDTHWKAVKRILRYLAGTIDHGIMIK---ADSPISL 3
             PLD+HW AVKRIL+YL GT+ +G+ ++    + PISL
Sbjct: 1083 TPLDSHWVAVKRILKYLKGTLSYGLHMQPAAVNGPISL 1120


>ref|XP_008350549.1| PREDICTED: uncharacterized protein LOC103413885 [Malus domestica]
          Length = 1668

 Score =  352 bits (902), Expect = e-104
 Identities = 186/407 (45%), Positives = 257/407 (63%), Gaps = 13/407 (3%)
 Frame = -2

Query: 1214 TTIEFPIDDTQIPDIPNEIVYGLLLSLLQVHILWSQGQMMAFTSRRSSLPIFIAWMSLQH 1035
            T    P+D    PD   E +  ++L +  V     Q +  +  S+R +    +   S+  
Sbjct: 1086 TQSPIPVD----PDFQQESL-SVVLPVPSVSFHPMQTRSKSGISKRKAFSASVT-SSVVQ 1139

Query: 1034 IFKPSKYHNGGLQWSWN------IQPCKKNQTWDLCSLPVGKKTIGCEWVFKLKRHADGS 873
            + +PS Y        W       I   +  QTW L  LPVGK  +GC+WV++LK++ +GS
Sbjct: 1140 LTEPSSYKTASKIPEWQVAMQDEIHALEAQQTWTLVPLPVGKNLVGCKWVYRLKKNPNGS 1199

Query: 872  IARYKARLIAKGYSQLAGLDYSETFSPVIKPVTIRVVLSIDVSHSWS-----VDNAFLNG 708
            IARYKARL+AKGYSQ  G+DY+ETFSPV+KP T+R++L++    +WS     V NAFL+G
Sbjct: 1200 IARYKARLVAKGYSQEEGIDYTETFSPVVKPTTVRLILALAAQFNWSLKQLDVRNAFLHG 1259

Query: 707  DIDHELYMTQPPGFEQGGQHT--VCKLKKSLYGLKQASRAWNSKFTSVLKSFGFTVSQAD 534
            D+  E+YM+QPPGF      +  VCKL+KSLYGLKQA RAWN KFTS L   GF  S +D
Sbjct: 1260 DLLEEVYMSQPPGFVSSSHPSNYVCKLQKSLYGLKQAPRAWNEKFTSFLPGLGFNASLSD 1319

Query: 533  SYLYYRRQKDSFIIVLAYVDDIIVTGNNDKCMQIFIEQLHQQFSLKDLGSLNHFLGIEVT 354
              L+ ++     +I+L YVDDII+TG++   +   +  L Q F +KDLG+L++FLG+++T
Sbjct: 1320 PSLFVKKHPTGIVILLLYVDDIILTGSSSSLISEVVSALTQAFDMKDLGNLHYFLGLQIT 1379

Query: 353  YASNGILLNQAKYIQNILGKVGMLQAKEMSTPMISNPPLSKNVGQPVEDATFYRSIVGAL 174
            Y S G+ ++Q KYIQ++L KV M  AK  +TP +    LSK  G        YRSIVGAL
Sbjct: 1380 YKSTGLFVSQTKYIQDLLAKVDMQDAKSCATPCLPYHRLSKTEGTLYHSPEQYRSIVGAL 1439

Query: 173  QYCTITRPDVSYSINRVSQYMHNPLDTHWKAVKRILRYLAGTIDHGI 33
            QY T TRPD+++++N+  Q+MHNPLD H  AVKRILRYL+GT+D GI
Sbjct: 1440 QYLTFTRPDIAFAVNQCCQFMHNPLDIHVVAVKRILRYLSGTLDFGI 1486


>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1358

 Score =  348 bits (894), Expect = e-104
 Identities = 200/518 (38%), Positives = 296/518 (57%), Gaps = 9/518 (1%)
 Frame = -2

Query: 1529 KGYKVLLPNNKIIVTRDVLFDESTFPYATSDSSNDTIFSDFCDPNNRFSPLLTMSDTPSQ 1350
            KGYK L  + +I +++DV+F+E  FPY      + T     C   N  +P L+   T S 
Sbjct: 700  KGYKCLSSSGRIYISKDVIFNEHRFPYTDLFQPSLTQNVSPCQYFN-LNPDLSPPCTTST 758

Query: 1349 ILSIPNAQDFVRPQLSTTNTDCDSPTVATPXXXXXXSHGTQHGDHTTIEFPIDDTQIPDI 1170
            +LS        +P L +   D     + +       S  +       +  P   T    I
Sbjct: 759  VLS-------QQPPLPSQIGDSSVSIIPSVSSSQNVSPSSPESSSQNVSSPTSSTAPASI 811

Query: 1169 PNEIVYGLLLSLLQVHILWSQGQMMAFTSRRSSLPIFIAWMSLQHIFKPSKYHNGGLQWS 990
            P  I           H + ++ +   F + R    +F+A    + + +     N      
Sbjct: 812  PRTI---------NNHPMQTRSKS-GFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQ 861

Query: 989  WNIQPCKKNQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKGYSQLAGLDY 810
                    N TWDL SLP  +K +GC+WVF++K +ADGSI + KARL+AKG+ Q+ G D+
Sbjct: 862  QEYNALMLNHTWDLVSLPSDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDF 921

Query: 809  SETFSPVIKPVTIRVVLSIDVSHSWS-----VDNAFLNGDIDHELYMTQPPGFEQGGQHT 645
             ETFSPVIKP+TIR++L++ ++++W+     V+NAFLNG ++  +YM QPPGFE G +  
Sbjct: 922  HETFSPVIKPITIRIILTLALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFEAGDKSL 981

Query: 644  VCKLKKSLYGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFIIVLAYVDDII 465
            VCKL K+LYGLKQA R W +K    L  FGF  S+ D  L+  + +   I +L YVDDII
Sbjct: 982  VCKLNKALYGLKQAPRQWFNKLKLTLTRFGFQASKCDPSLFQYQHQTHTIFILVYVDDII 1041

Query: 464  VTGNNDKCMQIFIEQLHQQFSLKDLGSLNHFLGIEVTY-ASNGILLNQAKYIQNILGKVG 288
            +TG++   +Q    QL   FSLK LGSL++FLGIEV +     ++L Q+KYI+++L K  
Sbjct: 1042 ITGSSSLLIQQITNQLDSIFSLKQLGSLDYFLGIEVKHLPDKSLVLTQSKYIRDLLFKTN 1101

Query: 287  MLQAKEMSTPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYSINRVSQYMH 108
            + +A    +PM SN  LS++      D TF+RS+VGALQY T+TRP++S+++N+V Q+M 
Sbjct: 1102 LAEAHGAPSPMFSNCKLSRSGNDFFHDPTFFRSVVGALQYATLTRPEISFAVNKVCQFMA 1161

Query: 107  NPLDTHWKAVKRILRYLAGTIDHGIMIK---ADSPISL 3
             PLD+HW AVKRIL+YL GT+ +G+ ++    + PISL
Sbjct: 1162 TPLDSHWVAVKRILKYLKGTLSYGLHMQPAAVNGPISL 1199


>gb|KYP67571.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 482

 Score =  328 bits (840), Expect = e-104
 Identities = 161/320 (50%), Positives = 220/320 (68%), Gaps = 6/320 (1%)
 Frame = -2

Query: 965  NQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKGYSQLAGLDYSETFSPVI 786
            N TW L  LP  +  IGC+WVF++K + D ++ +YKARL+AKG+ Q  G DY+ETFSPVI
Sbjct: 51   NGTWSLVPLPPNRTPIGCKWVFRVKENLDATVHKYKARLVAKGFHQQFGYDYNETFSPVI 110

Query: 785  KPVTIRVVLSIDVSHSW-----SVDNAFLNGDIDHELYMTQPPGFEQGGQHTVCKLKKSL 621
            KPVT+R++L++ ++H W      V+NAFLNG +  E+YMTQP GFE   +  VC+L K++
Sbjct: 111  KPVTVRLILTLVLTHRWPLKQLDVNNAFLNGTLAEEVYMTQPTGFESSDKTLVCRLHKAI 170

Query: 620  YGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFIIVLAYVDDIIVTGNNDKC 441
            YGLKQA RAW  K  S L  F F  S+ D  L+     ++ I VL YVDDII+TGNN   
Sbjct: 171  YGLKQAPRAWFEKLKSTLLQFHFQASKCDPSLFVYSVDNNIIYVLVYVDDIIITGNNSIV 230

Query: 440  MQIFIEQLHQQFSLKDLGSLNHFLGIEVTYASNG-ILLNQAKYIQNILGKVGMLQAKEMS 264
            +Q  + +LH  FSLKDL  L++FLGIEV   S+G ++L Q+KYI+N+L +  M  +K +S
Sbjct: 231  LQSLVSRLHSAFSLKDLRDLDYFLGIEVKNQSDGSLILTQSKYIRNLLNRTDMEASKPIS 290

Query: 263  TPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYSINRVSQYMHNPLDTHWK 84
            +PM+S   LSK   +   DA+ YRS+VGALQY TI RP++S+S+N+V Q+M  PL+ HW 
Sbjct: 291  SPMVSGCKLSKIRSEKFPDASLYRSVVGALQYATIIRPEISFSVNKVCQFMSQPLEQHWI 350

Query: 83   AVKRILRYLAGTIDHGIMIK 24
             VKRILRYL G I  G+ ++
Sbjct: 351  VVKRILRYLKGIISWGLRLQ 370


>gb|KYP51541.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 437

 Score =  326 bits (836), Expect = e-104
 Identities = 162/330 (49%), Positives = 224/330 (67%), Gaps = 9/330 (2%)
 Frame = -2

Query: 965  NQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKGYSQLAGLDYSETFSPVI 786
            N TW L  LP  +  IGC+WVF +K + DG++ +YKARL+ KG++Q  G DY+ETF+PVI
Sbjct: 51   NDTWSLVHLPPHRTAIGCKWVFCIKENPDGTVQKYKARLVTKGFNQQFGFDYNETFAPVI 110

Query: 785  KPVTIRVVLSIDVSHSW-----SVDNAFLNGDIDHELYMTQPPGFEQGGQHTVCKLKKSL 621
            K VTIR++L++ ++H W      ++NAFLNG +D E+YMTQPPGFE   ++ VCKL K++
Sbjct: 111  KLVTIRLILTLALTHHWPLQQLDINNAFLNGTLDEEVYMTQPPGFEASDKNLVCKLHKAI 170

Query: 620  YGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFIIVLAYVDDIIVTGNNDKC 441
            YGLKQA RAW  K  S L  F F  S+ D  L+     +S I +L YVDDII+T N+   
Sbjct: 171  YGLKQAPRAWFEKLKSTLLQFNFQASKCDPSLFVYSHANSVIYILVYVDDIIITSNDSTL 230

Query: 440  MQIFIEQLHQQFSLKDLGSLNHFLGIEVTYASNG-ILLNQAKYIQNILGKVGMLQAKEMS 264
            +   + QLH  FSLKDLG L++FLGIEV   S+G ++L Q+KYI+++L    M  +K  S
Sbjct: 231  LHTLVSQLHSTFSLKDLGDLDYFLGIEVKTQSDGSLILTQSKYIRDLLNHTDMEASKPFS 290

Query: 263  TPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYSINRVSQYMHNPLDTHWK 84
            + M+S   LSK   +   D + YRSIVGALQY TITRP++S+S+N+V Q+M +PL  HW 
Sbjct: 291  SLMVSGCKLSKVGTEDFLDVSLYRSIVGALQYATITRPEISFSVNKVYQFMSHPLAHHWS 350

Query: 83   AVKRILRYLAGTIDHGIMIK---ADSPISL 3
             VK ILRYL GT   G+ ++   ++SP+S+
Sbjct: 351  TVKHILRYLKGTTSWGLHLQPAPSNSPLSI 380


>emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]
          Length = 955

 Score =  340 bits (873), Expect = e-103
 Identities = 175/332 (52%), Positives = 229/332 (68%), Gaps = 10/332 (3%)
 Frame = -2

Query: 968  KNQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKGYSQLAGLDYSETFSPV 789
            KN+TW L SLP  + ++GC WVFKLKR+ DGS++RYKARL+AKGYSQ+ G D+ ETFS V
Sbjct: 563  KNKTWSLVSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSXV 622

Query: 788  IKPVTIRVVLSIDVSHSW-----SVDNAFLNGDIDHELYMTQPPGFE---QGGQHTVCKL 633
            +KP TIRVVL I VS SW      V+NAFLNG++  E+YM QPPGF+      Q  VCKL
Sbjct: 623  VKPTTIRVVLXIVVSQSWFIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKL 682

Query: 632  KKSLYGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFIIVLAYVDDIIVTGN 453
             K+LYGLKQA RAW  K    L+ FGF+ ++ D  L+ R    S + VL YVDDI+VT +
Sbjct: 683  HKALYGLKQAPRAWFDKLKISLQQFGFSSTKXDQSLFVRFTNCSSLFVLVYVDDIVVTXS 742

Query: 452  NDKCMQIFIEQLHQQFSLKDLGSLNHFLGIEVTYASNG--ILLNQAKYIQNILGKVGMLQ 279
            + + +   I +L   F LKDLG L++FLGIEV   ++G   L  + KYIQ++L K  M  
Sbjct: 743  SSQXIHELISRLXGLFXLKDLGXLSYFLGIEVKKTTBGGLHLSXKKKYIQDLLKKTKMDG 802

Query: 278  AKEMSTPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYSINRVSQYMHNPL 99
            AK + TPM+S   LS  +G P+++   YRS+VGALQY TITRP++++S+N+  Q+M  PL
Sbjct: 803  AKSLPTPMLSXLKLSAGMGDPIDNVFXYRSVVGALQYITITRPEIAFSVNKXCQFMXKPL 862

Query: 98   DTHWKAVKRILRYLAGTIDHGIMIKADSPISL 3
            DTHWKAVKRILRYL GT   GI++K    ++L
Sbjct: 863  DTHWKAVKRILRYLNGTXXLGIVLKPSETMNL 894


>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  347 bits (889), Expect = e-103
 Identities = 208/523 (39%), Positives = 308/523 (58%), Gaps = 15/523 (2%)
 Frame = -2

Query: 1529 KGYKVLLPNNKIIVTRDVLFDESTFPYAT--SDSSNDTIFSDFCDPNNRFSPLLTMSDTP 1356
            KG+K L    +I +++DV+F ES FPY +  + SS+++  S        F  + T ++  
Sbjct: 757  KGHKCLDATGRIYISKDVIFHESQFPYLSLFASSSSNSHMSHTYPAQILFPSVNTNTNLH 816

Query: 1355 SQILSIPNAQ--DFVRPQLSTTNTDCDSPTVATPXXXXXXSHGTQHGDHTTIEFPIDDTQ 1182
             +  S P+    D V P   +      SP+ +TP         T    ++ I  PI  T 
Sbjct: 817  PETSSAPDTDPPDPVSPLPGSV-----SPSSSTPL--------TISQINSLISQPISTTS 863

Query: 1181 --IPDIPNEIVYGLLLSLLQVHILWSQGQMMAFTSRRSSLP--IFIAWMSLQHIFKPSKY 1014
              +P  P + V  +  +    +I       M   ++  +L   +F+A +  + + K +  
Sbjct: 864  PSVPTPPADPVPAIRPA--SQNISHHNAHPMITRAKTGNLKPKVFVAALEPKSV-KSALN 920

Query: 1013 HNGGLQ-WSWNIQPCKKNQTWDLCSLPVGKKTIGCEWVFKLKRHADGSIARYKARLIAKG 837
                LQ      +    NQTW L  LP  +K IGC+W+F++K + DG++ ++KARL+AKG
Sbjct: 921  DPAWLQAMQAEYKALMDNQTWTLVPLPQHRKAIGCKWIFRVKENPDGTVNKFKARLVAKG 980

Query: 836  YSQLAGLDYSETFSPVIKPVTIRVVLSIDVSHSWSV-----DNAFLNGDIDHELYMTQPP 672
            + Q AG D++ETFSPVIKP+TIR++L++ V+  WSV     +NAFLNG +  E+YMTQP 
Sbjct: 981  FLQTAGFDFTETFSPVIKPITIRIILTLAVTFKWSVQQIDVNNAFLNGILQEEVYMTQPA 1040

Query: 671  GFEQGGQHTVCKLKKSLYGLKQASRAWNSKFTSVLKSFGFTVSQADSYLYYRRQKDSFII 492
            GFE   +  VCKL KSLYGLKQA RAW  + T  L   GF  S+ D  L    Q  +   
Sbjct: 1041 GFEASDKSLVCKLHKSLYGLKQAPRAWYDRLTQALLQLGFVKSKCDPSLLIHTQNGACTY 1100

Query: 491  VLAYVDDIIVTGNNDKCMQIFIEQLHQQFSLKDLGSLNHFLGIEVTYASNG-ILLNQAKY 315
            VL YVDDI++TG+    +   I +L+ +F+LK LG +++FLGIEV +  +G +LLNQ KY
Sbjct: 1101 VLIYVDDILITGSAPHLISDLIHKLNMKFALKQLGQIDYFLGIEVHHLPSGALLLNQTKY 1160

Query: 314  IQNILGKVGMLQAKEMSTPMISNPPLSKNVGQPVEDATFYRSIVGALQYCTITRPDVSYS 135
            I+++L K  M  +  + +PM+S+  LSK     + D T YRSIVGALQY T+TRPD+++S
Sbjct: 1161 IRDLLCKAHMEDSAPIGSPMVSSCRLSKYGSDTMTDPTLYRSIVGALQYATLTRPDIAFS 1220

Query: 134  INRVSQYMHNPLDTHWKAVKRILRYLAGTIDHGIMIKADSPIS 6
            +N+V Q+M +PL++HWKAVKRILRYL GT+ HG+++   SP S
Sbjct: 1221 VNKVCQFMAHPLESHWKAVKRILRYLNGTLSHGLLL-TPSPTS 1262