BLASTX nr result
ID: Rehmannia27_contig00045166
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00045166
(492 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP00431.1| unnamed protein product [Coffea canephora] 69 3e-23
emb|CDP14369.1| unnamed protein product [Coffea canephora] 74 2e-22
emb|CDP09717.1| unnamed protein product [Coffea canephora] 74 3e-21
emb|CDP14470.1| unnamed protein product [Coffea canephora] 62 2e-18
ref|XP_010451246.1| PREDICTED: uncharacterized protein LOC104733... 75 1e-14
ref|XP_008245804.1| PREDICTED: uncharacterized protein LOC103343... 62 4e-14
ref|XP_009124903.1| PREDICTED: putative ribonuclease H protein A... 70 4e-14
ref|XP_009146521.1| PREDICTED: putative ribonuclease H protein A... 62 1e-13
ref|XP_010468497.1| PREDICTED: uncharacterized protein LOC104748... 55 1e-13
ref|XP_009127063.1| PREDICTED: uncharacterized protein LOC103851... 69 1e-12
ref|XP_008378405.1| PREDICTED: putative ribonuclease H protein A... 59 1e-12
ref|XP_009102759.1| PREDICTED: uncharacterized protein LOC103828... 59 2e-12
ref|XP_009121334.1| PREDICTED: putative ribonuclease H protein A... 64 2e-12
ref|XP_008376986.1| PREDICTED: putative ribonuclease H protein A... 64 2e-12
ref|XP_009103788.1| PREDICTED: uncharacterized protein LOC103829... 58 2e-12
ref|XP_013650556.1| PREDICTED: uncharacterized protein LOC106355... 58 2e-12
ref|XP_009130450.1| PREDICTED: putative ribonuclease H protein A... 66 2e-12
ref|XP_009146118.1| PREDICTED: putative ribonuclease H protein A... 64 2e-12
ref|XP_009150812.1| PREDICTED: putative ribonuclease H protein A... 64 2e-12
ref|XP_013616974.1| PREDICTED: uncharacterized protein LOC106323... 64 2e-12
>emb|CDP00431.1| unnamed protein product [Coffea canephora]
Length = 344
Score = 68.9 bits (167), Expect(2) = 3e-23
Identities = 30/64 (46%), Positives = 41/64 (64%)
Frame = +1
Query: 1 LKIKGKIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIW 180
L IK KIK FIWRC N L ++ + + ICS CG+ E+++HI FHC +A ++W
Sbjct: 189 LNIKHKIKLFIWRCITNTLTARETIFRRTKQGSPICSRCGDGMETIEHILFHCHQAQKVW 248
Query: 181 KLAP 192
KLAP
Sbjct: 249 KLAP 252
Score = 66.2 bits (160), Expect(2) = 3e-23
Identities = 30/78 (38%), Positives = 43/78 (55%)
Frame = +2
Query: 185 LPPISWDLRPQETGHFREWWCAIASKKKKDFWQERLQLSTYLLWWIWKTRNTWIFEGLWI 364
L PI WD +TG F++WW A++ + ++ + L+ LLW +WK RN FEG
Sbjct: 250 LAPIQWDGIQNQTGCFKKWWAALSQATSRTEGRQHIALTANLLWQLWKDRNQMEFEGKER 309
Query: 365 SPQDVVAGAISEWMEFSE 418
+V A SEWME+ E
Sbjct: 310 EGLKIVQKASSEWMEYEE 327
>emb|CDP14369.1| unnamed protein product [Coffea canephora]
Length = 347
Score = 73.6 bits (179), Expect(2) = 2e-22
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +1
Query: 1 LKIKGKIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIW 180
LK+K K+KHFIW+C ILP +R + D++C CGE E+++H+ F C A+ IW
Sbjct: 22 LKVKHKLKHFIWKCLQGILPVNAVIRERCSKGDSVCKCCGEYPETIEHLLFFCDNALAIW 81
Query: 181 KLAP 192
K+AP
Sbjct: 82 KVAP 85
Score = 59.3 bits (142), Expect(2) = 2e-22
Identities = 29/76 (38%), Positives = 39/76 (51%)
Frame = +2
Query: 191 PISWDLRPQETGHFREWWCAIASKKKKDFWQERLQLSTYLLWWIWKTRNTWIFEGLWISP 370
P+SW +F WW I + + QER++L+ +LW IWK+RN FE + P
Sbjct: 85 PVSWAGLECLRNNFGHWWEEIREARAMESGQERIELTVNVLWQIWKSRNRRQFEDKGMDP 144
Query: 371 QDVVAGAISEWMEFSE 418
VV A EW EF E
Sbjct: 145 MTVVNKATREWREFQE 160
>emb|CDP09717.1| unnamed protein product [Coffea canephora]
Length = 613
Score = 73.6 bits (179), Expect(2) = 3e-21
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = +1
Query: 1 LKIKGKIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIW 180
LK+K KIKHFIWR + +LP + + D IC CGE ES++H+FF CSRA ++W
Sbjct: 307 LKVKSKIKHFIWRSLNGLLPVNDLVFKRIHQGDPICDGCGEQEESIEHLFFQCSRAQEVW 366
Query: 181 KLAP 192
K+AP
Sbjct: 367 KMAP 370
Score = 55.1 bits (131), Expect(2) = 3e-21
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 185 LPPISWDLRPQETGHFREWWCAIASKKKKDFWQERLQLSTYLLWWIWKTRNTWIFEGLWI 364
+ PI WD ++T + WW ++ + +E ++L+ +LW IWK RN W F
Sbjct: 368 MAPIQWDGLTEQTRNILVWWNSMLEATNRIEGREHVELTVNILWQIWKRRNEWKFNAKRR 427
Query: 365 SPQDVVAGAISEWME 409
P + + A+ EW E
Sbjct: 428 HPWESIKKALQEWQE 442
>emb|CDP14470.1| unnamed protein product [Coffea canephora]
Length = 660
Score = 62.4 bits (150), Expect(2) = 2e-18
Identities = 25/64 (39%), Positives = 38/64 (59%)
Frame = +1
Query: 1 LKIKGKIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIW 180
L IK K+K FIW+C LP + + K + D +C CGE E+++H+ +C + Q+W
Sbjct: 352 LNIKHKVKIFIWKCITGALPVRAAIFRKTRMGDPVCRLCGEDQETVEHLMLNCQHSQQVW 411
Query: 181 KLAP 192
K AP
Sbjct: 412 KAAP 415
Score = 57.0 bits (136), Expect(2) = 2e-18
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 191 PISWDLRPQETGHFREWWCAIASKKKKDFWQERLQLSTYLLWWIWKTRNTWIFEG-LWIS 367
PI WD + G FR WW I+ + + E + L+ +LW +WK RN+ FE S
Sbjct: 415 PIQWDGAMDQKGDFRRWWIRISEARTRQGGMEHIGLTAIILWQLWKERNSKEFENKTSCS 474
Query: 368 PQDVVAGAISEWMEFSE 418
P + A EW+E E
Sbjct: 475 PARTIGKAQKEWLEQEE 491
>ref|XP_010451246.1| PREDICTED: uncharacterized protein LOC104733362 [Camelina sativa]
Length = 430
Score = 74.7 bits (182), Expect(2) = 1e-14
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +1
Query: 16 KIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIWKLAPH 195
KIKHF WRC HN LP+ NLR + + D C CGEA E+++H+ FHC + +IW L +
Sbjct: 121 KIKHFWWRCLHNALPTAENLRKRRMLTDDTCQRCGEAPENINHLLFHCRISKEIWDLTTN 180
Query: 196 LMGPSPS 216
G S S
Sbjct: 181 FHGISSS 187
Score = 31.6 bits (70), Expect(2) = 1e-14
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 296 LSTYLLWWIWKTRNTWIFEGLWISPQDVVAGAISEWMEFSE 418
L ++ W IWKTRN +IF S D + AI ++ ++ E
Sbjct: 213 LFPFIGWRIWKTRNDFIFNNKRWSIPDTINRAILDFQQWKE 253
>ref|XP_008245804.1| PREDICTED: uncharacterized protein LOC103343954 [Prunus mume]
Length = 455
Score = 62.4 bits (150), Expect(2) = 4e-14
Identities = 28/70 (40%), Positives = 40/70 (57%)
Frame = +1
Query: 1 LKIKGKIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIW 180
L + KI+ F+W+C N+L K NL ++G +DT C+ CG ES H+FF C A W
Sbjct: 188 LPVPPKIRTFLWKCCRNVLAVKENLLHRGIDVDTTCTLCGREGESQVHLFFTCEFARLFW 247
Query: 181 KLAPHLMGPS 210
+P + PS
Sbjct: 248 FASPLQLDPS 257
Score = 42.0 bits (97), Expect(2) = 4e-14
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 242 WCAIASKKKK-DFWQERLQLSTYLLWWIWKTRNTWIFEGLWISPQDVVAGAISEWMEF 412
W + SK ++ + + E LQ + LW IWKTRN +FEG P+D V ++ EF
Sbjct: 268 WANLLSKYEQVEHYSEILQACAFGLWRIWKTRNGMVFEGQVTDPRDAVECFKNQVQEF 325
>ref|XP_009124903.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 452
Score = 69.7 bits (169), Expect(2) = 4e-14
Identities = 31/76 (40%), Positives = 45/76 (59%)
Frame = +1
Query: 4 KIKGKIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIWK 183
K K++HF+WR L K LR++G ++D CS C EA E + H+ FHC A ++W
Sbjct: 129 KTTPKLRHFLWRTLSGALAVKERLRSRGILLDITCSSCNEAPEDIGHVLFHCRFAQEVWA 188
Query: 184 LAPHLMGPSPSGNRSL 231
L+ M PS S +RS+
Sbjct: 189 LSLVPMPPSGSWSRSI 204
Score = 34.7 bits (78), Expect(2) = 4e-14
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +2
Query: 251 IASKKKKDFWQERLQLSTYLLWWIWKTRNTWIFEGLWISPQDVVAGAISE---WMEFSEG 421
I+ +KK+ +R + ++LW IWK RN++ F+ + P V+ A E W G
Sbjct: 212 ISCSRKKNLSPDRGLIFPWILWHIWKARNSFCFDHIRFDPAVVLDKARMEAEVWRNLQTG 271
Query: 422 I 424
+
Sbjct: 272 M 272
>ref|XP_009146521.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 642
Score = 62.0 bits (149), Expect(2) = 1e-13
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +1
Query: 1 LKIKGKIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIW 180
LK KI+HF+WR L L+++G DT C CG+A ES+ H+ F C A++ W
Sbjct: 320 LKTSPKIRHFLWRALSGALAVAERLQSRGLYGDTTCQACGQAPESICHVLFTCPTAVEAW 379
Query: 181 KLAPHLMGPSPSG 219
+LA + P P+G
Sbjct: 380 RLAG--IQPPPAG 390
Score = 41.2 bits (95), Expect(2) = 1e-13
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +2
Query: 218 ETGHFREWWCAIASKKKKDFWQERLQLSTYLLWWIWKTRNTWIFEGLWISPQDVVAGAIS 397
+T F +A+ KK+ ++ ++LW +WK RN IFE I+PQ +A A+
Sbjct: 393 QTSVFLNLHFLVAASKKQQSDHSNVKAFPWILWSLWKGRNALIFERTRITPQSTIAKALE 452
Query: 398 E 400
E
Sbjct: 453 E 453
>ref|XP_010468497.1| PREDICTED: uncharacterized protein LOC104748579 [Camelina sativa]
Length = 1041
Score = 55.1 bits (131), Expect(2) = 1e-13
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +1
Query: 16 KIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIWKLAPH 195
KIK F+W+ LP L++KG ++ C CG E+++H+ F CS + QIW L+
Sbjct: 737 KIKVFLWKLLSGALPVTAALKSKGMKVEDTCQICGAEEETINHVLFSCSLSRQIWALSGI 796
Query: 196 LMGPSPS 216
PSPS
Sbjct: 797 ---PSPS 800
Score = 47.8 bits (112), Expect(2) = 1e-13
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 251 IASKKKKDFWQERLQ-LSTYLLWWIWKTRNTWIFEGLWISPQDVVAGAISEWMEFSE 418
+ S ++ W E L+ +L+W IWK +N+ FEG SP D V +WME+SE
Sbjct: 815 LLSNQRNSLWPEELRKFFPWLIWRIWKNKNSVSFEGTSFSPLDTVQKCREDWMEWSE 871
>ref|XP_009127063.1| PREDICTED: uncharacterized protein LOC103851935 [Brassica rapa]
Length = 781
Score = 68.6 bits (166), Expect(2) = 1e-12
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +1
Query: 16 KIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIWKLAP 192
K+KHF+WR LP+ NL+ +G + +C CGEA E+L HIFFHC+ A ++WKLAP
Sbjct: 485 KLKHFLWRIAKKALPTGENLQRRGINANVMCCRCGEA-ETLPHIFFHCAFAKEVWKLAP 542
Score = 31.2 bits (69), Expect(2) = 1e-12
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +2
Query: 305 YLLWWIWKTRNTWIFEGLWISPQDVV---AGAISEW 403
++ W++W +RN IF+ +PQ+++ AI EW
Sbjct: 580 WICWFLWISRNNLIFQNRATTPQEIILKSVKAIREW 615
>ref|XP_008378405.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 263
Score = 58.5 bits (140), Expect(2) = 1e-12
Identities = 24/60 (40%), Positives = 37/60 (61%)
Frame = +1
Query: 1 LKIKGKIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIW 180
L + K+K F+WRC +N L ++NL + +D IC CGEA E+ H+FF C+ + +W
Sbjct: 27 LAVPNKLKFFVWRCCNNSLAMRVNLIRRRMHVDGICLMCGEAEETEHHLFFECAFSHVLW 86
Score = 41.2 bits (95), Expect(2) = 1e-12
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 230 FREWWCAIASK-KKKDFWQERLQLSTYLLWWIWKTRNTWIFEGLWISPQDVVAGAISEWM 406
FR++W + + + KD +E LQ +++W IWK N +F G+ ++P ++V + +
Sbjct: 103 FRDYWRGLCIQFRDKDRQEELLQECVFVIWRIWKAWNEMVFNGVLVNPIEMVHMVRKKNL 162
Query: 407 EF 412
EF
Sbjct: 163 EF 164
>ref|XP_009102759.1| PREDICTED: uncharacterized protein LOC103828873 [Brassica rapa]
Length = 1081
Score = 59.3 bits (142), Expect(2) = 2e-12
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = +1
Query: 16 KIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIWKLAPH 195
KIKHF+W+ N +P L ++ C D C CG E+++H+ F C A Q W LA H
Sbjct: 921 KIKHFMWQALSNCVPVCSRLTDRHCHSDRSCQRCGHVDETVNHMLFECPPATQTWALALH 980
Query: 196 LM----GPSPS 216
L PSPS
Sbjct: 981 LSLQGEFPSPS 991
Score = 39.7 bits (91), Expect(2) = 2e-12
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +2
Query: 263 KKKDFWQERLQLSTYLLWWIWKTRNTWIFEGLWISPQDVVAGAISE 400
KK+D + L +++W++WK+RN +FEG ++P +++ A SE
Sbjct: 1004 KKQDMPDDVLARIPWIIWFMWKSRNGKVFEGKDLTPLEILQSATSE 1049
>ref|XP_009121334.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 538
Score = 64.3 bits (155), Expect(2) = 2e-12
Identities = 29/77 (37%), Positives = 44/77 (57%)
Frame = +1
Query: 1 LKIKGKIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIW 180
L+ K+KHF+W+ + K NLR++G DT+C CG ES +H+FF C +Q+W
Sbjct: 232 LRCPPKLKHFLWQLLTGCIAVKKNLRSRGMQGDTVCDRCGAPEESANHVFFECPPTVQVW 291
Query: 181 KLAPHLMGPSPSGNRSL 231
L+ M P+ +SL
Sbjct: 292 ALSRIPMNPNIFPTQSL 308
Score = 34.7 bits (78), Expect(2) = 2e-12
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Frame = +2
Query: 275 FWQERLQLS----TYLLWWIWKTRNTWIFEGLWISPQDVVAGAISE---WME 409
FW+ ++ ++LW+IWK RN +F L + P+D + A +E W+E
Sbjct: 316 FWRVSPEMEDHSFAWILWYIWKGRNNKVFSNLDMDPRDTLKLAETESLLWVE 367
>ref|XP_008376986.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 341
Score = 63.9 bits (154), Expect(2) = 2e-12
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = +1
Query: 4 KIKGKIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIWK 183
K+ GK+K IWR + LP+++NLR K +MD C FCG E+++HI C A IW
Sbjct: 90 KVPGKVKICIWRSCLDALPTRVNLRIKKVLMDDCCVFCGNELETIEHIMLRCFHAKAIWS 149
Query: 184 LAP 192
+P
Sbjct: 150 SSP 152
Score = 35.0 bits (79), Expect(2) = 2e-12
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 239 WWCAIASKKKKDFWQERLQLSTYLLWWIWKTRNTWIFEGLWISPQDV 379
W ++S K ER L +LW IWK RN ++G + PQD+
Sbjct: 168 WLARVSSNISK----ERFDLVLVMLWNIWKARNDLFWKGSVLPPQDI 210
>ref|XP_009103788.1| PREDICTED: uncharacterized protein LOC103829849 [Brassica rapa]
Length = 1405
Score = 58.2 bits (139), Expect(2) = 2e-12
Identities = 30/67 (44%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 1 LKIKGKIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIW 180
L+ KIK F WR N +P L +G MD C CG ES++HI F CS A Q+W
Sbjct: 1076 LQTAPKIKTFFWRAVSNAIPVGEILVKRGIKMDPCCQDCGAQRESINHILFQCSIARQVW 1135
Query: 181 KLA--PH 195
LA PH
Sbjct: 1136 ALANVPH 1142
Score = 40.4 bits (93), Expect(2) = 2e-12
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 218 ETGHFREWWCAIASKKKKDFWQERLQLSTYLLWWIWKTRNTWIFEGLWISPQDVVAGAIS 397
E HF + + K K+ +E +++W++WK RN IFE +S D+V +
Sbjct: 1149 EVSHFSNFHTLLVMMKNKNISEEVRNAIPWIVWYLWKYRNGIIFEAKKVSASDLVVKVLE 1208
Query: 398 E 400
E
Sbjct: 1209 E 1209
>ref|XP_013650556.1| PREDICTED: uncharacterized protein LOC106355090 [Brassica napus]
Length = 930
Score = 58.2 bits (139), Expect(2) = 2e-12
Identities = 30/67 (44%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 1 LKIKGKIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIW 180
L+ KIK F WR N +P L +G MD C CG ES++HI F CS A Q+W
Sbjct: 601 LQTAPKIKTFFWRAVSNAIPVGEILVKRGIKMDPCCQDCGAQRESINHILFQCSIARQVW 660
Query: 181 KLA--PH 195
LA PH
Sbjct: 661 ALANVPH 667
Score = 40.4 bits (93), Expect(2) = 2e-12
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 218 ETGHFREWWCAIASKKKKDFWQERLQLSTYLLWWIWKTRNTWIFEGLWISPQDVVAGAIS 397
E HF + + K K+ +E +++W++WK RN IFE +S D+V +
Sbjct: 674 EVSHFSNFHTLLVMMKNKNISEEVRNAIPWIVWYLWKYRNGIIFEAKKVSASDLVVKVLE 733
Query: 398 E 400
E
Sbjct: 734 E 734
>ref|XP_009130450.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 635
Score = 66.2 bits (160), Expect(2) = 2e-12
Identities = 28/66 (42%), Positives = 45/66 (68%)
Frame = +1
Query: 16 KIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIWKLAPH 195
K+K F+W+ N LP+ NL+ +G +++T C+ CGE ES+DHI HC+ A ++W++ P
Sbjct: 341 KLKFFLWKVALNALPTGDNLQKRGLLINTNCARCGET-ESIDHILVHCTFAKEVWEVGPW 399
Query: 196 LMGPSP 213
L P+P
Sbjct: 400 LHQPNP 405
Score = 32.3 bits (72), Expect(2) = 2e-12
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 305 YLLWWIWKTRNTWIFEGLWISPQDVVAGAIS---EW 403
+L W +W +RN +FE +PQ VV AIS EW
Sbjct: 436 WLCWTLWISRNQLLFENRTCTPQAVVTKAISLCREW 471
>ref|XP_009146118.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 541
Score = 63.9 bits (154), Expect(2) = 2e-12
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +1
Query: 1 LKIKGKIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIW 180
L+ K+KHF+W+ + K NLR++G DT+C CG ES +H+FF C +Q+W
Sbjct: 235 LRCPPKLKHFLWQLLTGCIAVKKNLRSRGMQGDTVCDRCGAPEESANHVFFECPPTVQVW 294
Query: 181 KLAPHLMGPSPSGNRSL 231
L+ M P +SL
Sbjct: 295 ALSRIPMNPDIFPTQSL 311
Score = 34.7 bits (78), Expect(2) = 2e-12
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Frame = +2
Query: 275 FWQERLQLS----TYLLWWIWKTRNTWIFEGLWISPQDVVAGAISE---WME 409
FW+ ++ ++LW+IWK RN +F L + P+D + A +E W+E
Sbjct: 319 FWRVSPEMEDHSFAWILWYIWKGRNNKVFSNLDMDPRDTLKLAETESLLWVE 370
>ref|XP_009150812.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 534
Score = 63.9 bits (154), Expect(2) = 2e-12
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +1
Query: 1 LKIKGKIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIW 180
L+ K+KHF+W+ + K NLR++G DT+C CG ES +H+FF C +Q+W
Sbjct: 235 LRCPPKLKHFLWQLLTGCIAVKKNLRSRGMQGDTVCDRCGAPEESANHVFFECPPTVQVW 294
Query: 181 KLAPHLMGPSPSGNRSL 231
L+ M P +SL
Sbjct: 295 ALSRIPMNPDIFPTQSL 311
Score = 34.7 bits (78), Expect(2) = 2e-12
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Frame = +2
Query: 275 FWQERLQLS----TYLLWWIWKTRNTWIFEGLWISPQDVVAGAISE---WME 409
FW+ ++ ++LW+IWK RN +F L + P+D + A +E W+E
Sbjct: 319 FWRVSPEMEDHSFAWILWYIWKGRNNKVFSNLDMDPRDTLKLAETESLLWVE 370
>ref|XP_013616974.1| PREDICTED: uncharacterized protein LOC106323383 [Brassica oleracea
var. oleracea]
Length = 464
Score = 63.5 bits (153), Expect(2) = 2e-12
Identities = 29/76 (38%), Positives = 41/76 (53%)
Frame = +1
Query: 4 KIKGKIKHFIWRCFHNILPSKINLRNKGCVMDTICSFCGEACESLDHIFFHCSRAMQIWK 183
K K++HF+WR L K LR++G +DT CS CG E ++H+ F C A +W
Sbjct: 175 KTTPKLRHFLWRILSGALAVKERLRSRGINIDTTCSSCGNGREDINHVLFQCRFAQDVWS 234
Query: 184 LAPHLMGPSPSGNRSL 231
L+ M PS S S+
Sbjct: 235 LSAVPMPPSGSWYNSV 250
Score = 35.0 bits (79), Expect(2) = 2e-12
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +2
Query: 296 LSTYLLWWIWKTRNTWIFEGLWISPQDVVAGAISE---WME 409
+S +LLW IWK RN + FE + P +++ AI E W E
Sbjct: 273 VSPWLLWHIWKARNAFCFEYKRLDPANILDKAIMEAQIWRE 313