BLASTX nr result
ID: Rehmannia27_contig00044189
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00044189
(516 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008999589.1| ribosomal protein L2 (mitochondrion) [Vaccin... 46 2e-07
ref|YP_004849339.1| ribosomal protein L2 [Cucumis sativus] gi|32... 47 6e-07
gb|AEN56111.1| ribosomal protein L2 [Cucumis melo subsp. melo] 45 2e-06
ref|YP_009045801.1| ribosomal protein L2 (mitochondrion) [Batis ... 40 2e-06
pir||S46947 ribosomal protein L2 - evening primrose mitochondrio... 42 3e-06
ref|YP_002608368.1| ribosomal protein L2 [Vitis vinifera] gi|209... 39 9e-06
>ref|YP_008999589.1| ribosomal protein L2 (mitochondrion) [Vaccinium macrocarpon]
gi|549531664|gb|AGX28803.1| ribosomal protein L2
(mitochondrion) [Vaccinium macrocarpon]
Length = 335
Score = 45.8 bits (107), Expect(2) = 2e-07
Identities = 35/93 (37%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Frame = -2
Query: 389 KNTFFLCESRKWTMHCLLPEHSMNIT*YFFDSVLGARDFR------VFGACEH---KLEK 237
KNTFFLCE RKW H +L H + + L + FR + GA EH K +
Sbjct: 217 KNTFFLCEIRKWRTHSILWAHRIK-----RKAALSWQSFRRQETDGLVGAAEHNESKPKT 271
Query: 236 DQGYLP--QTGNITSICPCSVDKISQRKLIFSH 144
DQG LP G T C VD+ +I SH
Sbjct: 272 DQGSLPAKPIGEGTKDGRCKVDRAPVTYIIASH 304
Score = 35.8 bits (81), Expect(2) = 2e-07
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Frame = -3
Query: 493 SSPKTKEENGSISLSRSFGFPRITP--------VDKVRFLIRGKTHFF 374
SSPK K E +S+ SFGFPRI ++R +RGK FF
Sbjct: 174 SSPKAKGETAPLSVGSSFGFPRIAVAGAKPAFFAPRMREKVRGKNTFF 221
>ref|YP_004849339.1| ribosomal protein L2 [Cucumis sativus] gi|325305597|gb|ADZ10766.1|
ribosomal protein L2 [Cucumis sativus]
Length = 341
Score = 47.0 bits (110), Expect(2) = 6e-07
Identities = 35/95 (36%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Frame = -2
Query: 389 KNTFFLCESRKWTMHCLLPEHSMNIT*YFFDSVLGARDFR------VFGACEH---KLEK 237
K TF LCE RKW H +L H M + L R FR + G EH K E+
Sbjct: 223 KKTFSLCEVRKWRTHSILWAHRMK-----GKAALSWRSFRRQETLGLVGGAEHKESKAER 277
Query: 236 DQGYLP--QTGNITSICPCSVDKISQRKLIFSHMC 138
DQG LP G C V+++ LI SH C
Sbjct: 278 DQGSLPAKPIGEGPKDGACKVNRVPVTYLIASHKC 312
Score = 33.1 bits (74), Expect(2) = 6e-07
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Frame = -3
Query: 496 FSSPKTKEENGSISLSRSFGFPRITP--------VDKVRFLIRGKTHF 377
FSS KTK E S+S SF FPR+ ++R +RGK F
Sbjct: 179 FSSQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTF 226
>gb|AEN56111.1| ribosomal protein L2 [Cucumis melo subsp. melo]
Length = 354
Score = 45.4 bits (106), Expect(2) = 2e-06
Identities = 34/95 (35%), Positives = 41/95 (43%), Gaps = 11/95 (11%)
Frame = -2
Query: 389 KNTFFLCESRKWTMHCLLPEHSMNIT*YFFDSVLGARDFR------VFGACEH---KLEK 237
K TF LCE RKW H +L H M + L R FR + G EH K E+
Sbjct: 223 KKTFSLCEVRKWRTHSILWAHRMK-----GKAALSWRSFRRQETLGLVGGAEHKESKAER 277
Query: 236 DQGYLP--QTGNITSICPCSVDKISQRKLIFSHMC 138
DQG LP G C V+++ I SH C
Sbjct: 278 DQGSLPAKPIGEGPKDGACKVNRVPVTYFIASHKC 312
Score = 33.1 bits (74), Expect(2) = 2e-06
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Frame = -3
Query: 496 FSSPKTKEENGSISLSRSFGFPRITP--------VDKVRFLIRGKTHF 377
FSS KTK E S+S SF FPR+ ++R +RGK F
Sbjct: 179 FSSQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTF 226
>ref|YP_009045801.1| ribosomal protein L2 (mitochondrion) [Batis maritima]
gi|655168575|gb|AIC83404.1| ribosomal protein L2
(mitochondrion) (mitochondrion) [Batis maritima]
Length = 338
Score = 40.0 bits (92), Expect(2) = 2e-06
Identities = 32/93 (34%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
Frame = -2
Query: 389 KNTFFLCESRKWTMHCLLPEHSMNIT*YFFDSVLGARDFR------VFGACEHKLEK--- 237
K+TF LCE RKW H +L H + + L + FR + GA EH K
Sbjct: 218 KSTFSLCEVRKWRTHSILWAHRIK-----RKAALSWQSFRPPFFLGLVGAAEHNKSKPKT 272
Query: 236 DQGYLP--QTGNITSICPCSVDKISQRKLIFSH 144
DQG LP G C VD+ +I SH
Sbjct: 273 DQGSLPAKPIGKRAKDGACKVDRAPVTYIIASH 305
Score = 38.1 bits (87), Expect(2) = 2e-06
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 8/48 (16%)
Frame = -3
Query: 496 FSSPKTKEENGSISLSRSFGFPRITP--------VDKVRFLIRGKTHF 377
FSSPK K E S+S + SFGFPRI ++R +RGK+ F
Sbjct: 174 FSSPKAKGETASLSFASSFGFPRIAVAGAKPSFFAPRMREKVRGKSTF 221
>pir||S46947 ribosomal protein L2 - evening primrose mitochondrion
(mitochondrion) [Oenothera villaricae]
gi|516394|emb|CAA56451.1| 70s mitochondrial ribosomal
protein L2 [Oenothera berteroana]
Length = 332
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 34/93 (36%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
Frame = -2
Query: 389 KNTFFLCESRKWTMHCLLPEHSMNIT*YFFDSVLGARDFR------VFGACEH---KLEK 237
KNTF LCE RKW H +L H + + L FR + GA EH K +
Sbjct: 214 KNTFSLCEVRKWRTHSILWAHRIK-----RKAALSWLSFRRQETDGLVGAAEHNESKPKT 268
Query: 236 DQGYLP--QTGNITSICPCSVDKISQRKLIFSH 144
DQG LP G T C VD+ +I SH
Sbjct: 269 DQGSLPAKPIGEGTKDGACKVDRAPVTYIIASH 301
Score = 35.8 bits (81), Expect(2) = 3e-06
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -3
Query: 496 FSSPKTKEENGSISLSRSFGFPRI 425
FSSPK K E S+S SFGFPRI
Sbjct: 167 FSSPKAKGETASLSFGSSFGFPRI 190
>ref|YP_002608368.1| ribosomal protein L2 [Vitis vinifera] gi|209954165|emb|CAQ77612.1|
ribosomal protein L2 [Vitis vinifera]
gi|239764759|gb|ACS15228.1| ribosomal protein L2 [Vitis
vinifera]
Length = 334
Score = 39.3 bits (90), Expect(2) = 9e-06
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Frame = -2
Query: 389 KNTFFLCESRKWTMHCLLPEHSMNIT*YFFDSVLGARDFR------VFGACEH---KLEK 237
KNTF LCE RKW H +L H + + L + FR + GA EH K +
Sbjct: 217 KNTFSLCEVRKWRTHSILWAHRIK-----RKAALSWQSFRRQETLGLVGAAEHNESKPKT 271
Query: 236 DQG-YLPQTGNITSICPCSVDKISQRKLIFSH 144
DQG Y G C VD+ +I SH
Sbjct: 272 DQGFYSKPIGEGPKDGACKVDRAPVTYIIASH 303
Score = 37.0 bits (84), Expect(2) = 9e-06
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Frame = -3
Query: 496 FSSPKTKEENGSISLSRSFGFPRITP--------VDKVRFLIRGKTHF 377
FSSPK K E S+S SFGFPRI ++R +RGK F
Sbjct: 173 FSSPKAKGETSSLSFGSSFGFPRIAVAGAKPAFFAPRMREKLRGKNTF 220