BLASTX nr result

ID: Rehmannia27_contig00043880 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00043880
         (399 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_051197694.1| RHS repeat-associated core domain-containing...    56   9e-07

>ref|WP_051197694.1| RHS repeat-associated core domain-containing protein, partial
           [Flavobacterium soli]
          Length = 486

 Score = 56.2 bits (134), Expect = 9e-07
 Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
 Frame = +2

Query: 2   GAVQILGGGLEVW----GATTLSATGVGAIVGVPMALHGGDNIGTGLNRMLGLGDGTTLT 169
           G +++LGG LE      G    S TG+GA+VG  +A+HG D  GTGL +++   + +TLT
Sbjct: 272 GGLKLLGGTLEAIAGTAGGAATSWTGIGAVVGGAVAIHGTDVAGTGLKQLISGEEESTLT 331

Query: 170 YQGTYALTGSSTAASFVDQGISFAG-GVASLASSMRSAWTITAADKAA 310
            Q   +   S   A  +D  IS  G G  S  S+        AA++AA
Sbjct: 332 SQAIQSTGVSQQNADAIDSTISIVGTGGTSAMSTNGKLINGLAANRAA 379


Top