BLASTX nr result
ID: Rehmannia27_contig00043868
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00043868
(513 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ALT31538.1| mediator of RNA polymerase II transcription subun... 166 2e-48
ref|XP_011101344.1| PREDICTED: probable mediator of RNA polymera... 108 9e-26
ref|XP_009798194.1| PREDICTED: probable mediator of RNA polymera... 87 1e-18
ref|XP_009798193.1| PREDICTED: probable mediator of RNA polymera... 87 1e-18
ref|XP_009798192.1| PREDICTED: probable mediator of RNA polymera... 87 1e-18
ref|XP_009589437.1| PREDICTED: probable mediator of RNA polymera... 88 2e-18
ref|XP_009589436.1| PREDICTED: probable mediator of RNA polymera... 88 2e-18
ref|XP_009589435.1| PREDICTED: probable mediator of RNA polymera... 88 2e-18
ref|XP_009589434.1| PREDICTED: probable mediator of RNA polymera... 88 2e-18
dbj|BAT73294.1| hypothetical protein VIGAN_01076700 [Vigna angul... 87 2e-17
gb|KOM30620.1| hypothetical protein LR48_Vigan01g017400 [Vigna a... 87 2e-17
ref|XP_014507165.1| PREDICTED: probable mediator of RNA polymera... 85 6e-17
ref|XP_014507157.1| PREDICTED: probable mediator of RNA polymera... 85 8e-17
ref|XP_014507149.1| PREDICTED: probable mediator of RNA polymera... 85 9e-17
ref|XP_010252356.1| PREDICTED: probable mediator of RNA polymera... 85 2e-16
gb|KJB67900.1| hypothetical protein B456_010G216800 [Gossypium r... 79 3e-14
ref|XP_002265433.2| PREDICTED: probable mediator of RNA polymera... 76 2e-13
emb|CDY56541.1| BnaA03g55870D [Brassica napus] 75 4e-13
ref|XP_015170046.1| PREDICTED: probable mediator of RNA polymera... 71 6e-13
gb|KDO53373.1| hypothetical protein CISIN_1g018587mg [Citrus sin... 72 3e-12
>gb|ALT31538.1| mediator of RNA polymerase II transcription subunit 26-like
protein, partial [Rehmannia glutinosa]
Length = 250
Score = 166 bits (419), Expect = 2e-48
Identities = 87/116 (75%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAFSRCQNCNF 166
MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAFSRCQNCNF
Sbjct: 1 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAFSRCQNCNF 60
Query: 165 -XXXXXXXXXXXXXXXXXXXXXXXXXXENQSERFLVDLLQRLVDMDTTFKTLKETD 1
ENQSER L+DLLQRLVDMDTTFKTLKETD
Sbjct: 61 KESEGLEEEEDDEETKKILEIKILLDDENQSERSLIDLLQRLVDMDTTFKTLKETD 116
>ref|XP_011101344.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Sesamum indicum]
Length = 289
Score = 108 bits (270), Expect = 9e-26
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAFSRCQNC 172
MDL+EFRSFILDSGLD+WTWIDMAISVA ADHENEL+ RRDGI+QRLY P F+RC NC
Sbjct: 1 MDLNEFRSFILDSGLDVWTWIDMAISVASADHENELKKRRDGIVQRLYAPVFARCLNC 58
>ref|XP_009798194.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X3 [Nicotiana sylvestris]
Length = 187
Score = 87.4 bits (215), Expect = 1e-18
Identities = 50/115 (43%), Positives = 65/115 (56%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAFSRCQNCNF 166
M+LDEFR + +S +D+WT+ID AISVA DHENEL +RRD I+++L P C+NCN
Sbjct: 1 MELDEFRLMLENSSVDLWTFIDTAISVAIRDHENELLSRRDAIVEKLNAPLL--CKNCN- 57
Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXENQSERFLVDLLQRLVDMDTTFKTLKETD 1
NQSE LV+LLQ L +MD +FK L+ TD
Sbjct: 58 -----SAGNYEDLETKIIRIKKLLEYPNQSENCLVELLQTLAEMDISFKVLEITD 107
>ref|XP_009798193.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X2 [Nicotiana sylvestris]
Length = 188
Score = 87.4 bits (215), Expect = 1e-18
Identities = 50/115 (43%), Positives = 65/115 (56%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAFSRCQNCNF 166
M+LDEFR + +S +D+WT+ID AISVA DHENEL +RRD I+++L P C+NCN
Sbjct: 1 MELDEFRLMLENSSVDLWTFIDTAISVAIRDHENELLSRRDAIVEKLNAPLL--CKNCN- 57
Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXENQSERFLVDLLQRLVDMDTTFKTLKETD 1
NQSE LV+LLQ L +MD +FK L+ TD
Sbjct: 58 -----SAGNYEDLETKIIRIKKLLEYPNQSENCLVELLQTLAEMDISFKVLEITD 107
>ref|XP_009798192.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X1 [Nicotiana sylvestris]
Length = 190
Score = 87.4 bits (215), Expect = 1e-18
Identities = 50/115 (43%), Positives = 65/115 (56%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAFSRCQNCNF 166
M+LDEFR + +S +D+WT+ID AISVA DHENEL +RRD I+++L P C+NCN
Sbjct: 1 MELDEFRLMLENSSVDLWTFIDTAISVAIRDHENELLSRRDAIVEKLNAPLL--CKNCN- 57
Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXENQSERFLVDLLQRLVDMDTTFKTLKETD 1
NQSE LV+LLQ L +MD +FK L+ TD
Sbjct: 58 -----SAGNYEDLETKIIRIKKLLEYPNQSENCLVELLQTLAEMDISFKVLEITD 107
>ref|XP_009589437.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X4 [Nicotiana tomentosiformis]
Length = 226
Score = 87.8 bits (216), Expect = 2e-18
Identities = 50/115 (43%), Positives = 64/115 (55%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAFSRCQNCNF 166
M+LDEFR + +S +D+WT+ID AISVA DH NEL +RRD I+++LY P C+NCN
Sbjct: 1 MELDEFRLMLENSSVDLWTFIDTAISVAILDHGNELLSRRDAIVEKLYAPLL--CKNCN- 57
Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXENQSERFLVDLLQRLVDMDTTFKTLKETD 1
NQSE LV+LLQ L +MD FK L+ TD
Sbjct: 58 -----SAGNCEDLETKIIRIKKLLENPNQSENCLVELLQTLAEMDINFKVLEITD 107
>ref|XP_009589436.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X3 [Nicotiana tomentosiformis]
Length = 227
Score = 87.8 bits (216), Expect = 2e-18
Identities = 50/115 (43%), Positives = 64/115 (55%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAFSRCQNCNF 166
M+LDEFR + +S +D+WT+ID AISVA DH NEL +RRD I+++LY P C+NCN
Sbjct: 1 MELDEFRLMLENSSVDLWTFIDTAISVAILDHGNELLSRRDAIVEKLYAPLL--CKNCN- 57
Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXENQSERFLVDLLQRLVDMDTTFKTLKETD 1
NQSE LV+LLQ L +MD FK L+ TD
Sbjct: 58 -----SAGNCEDLETKIIRIKKLLENPNQSENCLVELLQTLAEMDINFKVLEITD 107
>ref|XP_009589435.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X2 [Nicotiana tomentosiformis]
Length = 227
Score = 87.8 bits (216), Expect = 2e-18
Identities = 50/115 (43%), Positives = 64/115 (55%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAFSRCQNCNF 166
M+LDEFR + +S +D+WT+ID AISVA DH NEL +RRD I+++LY P C+NCN
Sbjct: 1 MELDEFRLMLENSSVDLWTFIDTAISVAILDHGNELLSRRDAIVEKLYAPLL--CKNCN- 57
Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXENQSERFLVDLLQRLVDMDTTFKTLKETD 1
NQSE LV+LLQ L +MD FK L+ TD
Sbjct: 58 -----SAGNCEDLETKIIRIKKLLENPNQSENCLVELLQTLAEMDINFKVLEITD 107
>ref|XP_009589434.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X1 [Nicotiana tomentosiformis]
Length = 228
Score = 87.8 bits (216), Expect = 2e-18
Identities = 50/115 (43%), Positives = 64/115 (55%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAFSRCQNCNF 166
M+LDEFR + +S +D+WT+ID AISVA DH NEL +RRD I+++LY P C+NCN
Sbjct: 1 MELDEFRLMLENSSVDLWTFIDTAISVAILDHGNELLSRRDAIVEKLYAPLL--CKNCN- 57
Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXENQSERFLVDLLQRLVDMDTTFKTLKETD 1
NQSE LV+LLQ L +MD FK L+ TD
Sbjct: 58 -----SAGNCEDLETKIIRIKKLLENPNQSENCLVELLQTLAEMDINFKVLEITD 107
>dbj|BAT73294.1| hypothetical protein VIGAN_01076700 [Vigna angularis var.
angularis]
Length = 306
Score = 87.0 bits (214), Expect = 2e-17
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 18/133 (13%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAF---SRCQN 175
MD ++FRS + +G+DIW +D+AI+VA ADH +ELR RRDGI++RLY +F SRC N
Sbjct: 1 MDSNDFRSILESAGIDIWMLMDVAIAVASADHSDELRRRRDGIVERLYATSFLSSSRCPN 60
Query: 174 CNF---------------XXXXXXXXXXXXXXXXXXXXXXXXXXENQSERFLVDLLQRLV 40
CN +QS+ L++LLQ L
Sbjct: 61 CNIDDVRETEMQSNPSAEEEKDTCEVLFDDEQKKILEIKEQLEDPHQSKDSLLELLQNLA 120
Query: 39 DMDTTFKTLKETD 1
DMD TF+ L+ETD
Sbjct: 121 DMDITFRALQETD 133
>gb|KOM30620.1| hypothetical protein LR48_Vigan01g017400 [Vigna angularis]
Length = 316
Score = 87.0 bits (214), Expect = 2e-17
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 18/133 (13%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAF---SRCQN 175
MD ++FRS + +G+DIW +D+AI+VA ADH +ELR RRDGI++RLY +F SRC N
Sbjct: 1 MDSNDFRSILESAGIDIWMLMDVAIAVASADHSDELRRRRDGIVERLYATSFLSSSRCPN 60
Query: 174 CNF---------------XXXXXXXXXXXXXXXXXXXXXXXXXXENQSERFLVDLLQRLV 40
CN +QS+ L++LLQ L
Sbjct: 61 CNIDDVRETEMQSNPSAEEEKDTCEVLFDDEQKKILEIKEQLEDPHQSKDSLLELLQNLA 120
Query: 39 DMDTTFKTLKETD 1
DMD TF+ L+ETD
Sbjct: 121 DMDITFRALQETD 133
>ref|XP_014507165.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X3 [Vigna radiata var. radiata]
Length = 285
Score = 85.1 bits (209), Expect = 6e-17
Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 18/133 (13%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAF---SRCQN 175
MD ++FRS + +G+DIW +D+AI+VA ADH +ELR RRDGI++RLY +F SRC N
Sbjct: 1 MDSNDFRSILESAGIDIWMLMDVAIAVASADHSDELRRRRDGIVERLYATSFLSSSRCPN 60
Query: 174 CNF---------------XXXXXXXXXXXXXXXXXXXXXXXXXXENQSERFLVDLLQRLV 40
C+ +QS+ L++LLQ L
Sbjct: 61 CDIDDVRETEMQSNPSAEEEKDTCEVLFDDEQKKILEIKEQLEDPHQSKDSLLELLQNLA 120
Query: 39 DMDTTFKTLKETD 1
DMD TF+ L+ETD
Sbjct: 121 DMDITFRALQETD 133
>ref|XP_014507157.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X2 [Vigna radiata var. radiata]
Length = 306
Score = 85.1 bits (209), Expect = 8e-17
Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 18/133 (13%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAF---SRCQN 175
MD ++FRS + +G+DIW +D+AI+VA ADH +ELR RRDGI++RLY +F SRC N
Sbjct: 1 MDSNDFRSILESAGIDIWMLMDVAIAVASADHSDELRRRRDGIVERLYATSFLSSSRCPN 60
Query: 174 CNF---------------XXXXXXXXXXXXXXXXXXXXXXXXXXENQSERFLVDLLQRLV 40
C+ +QS+ L++LLQ L
Sbjct: 61 CDIDDVRETEMQSNPSAEEEKDTCEVLFDDEQKKILEIKEQLEDPHQSKDSLLELLQNLA 120
Query: 39 DMDTTFKTLKETD 1
DMD TF+ L+ETD
Sbjct: 121 DMDITFRALQETD 133
>ref|XP_014507149.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X1 [Vigna radiata var. radiata]
Length = 316
Score = 85.1 bits (209), Expect = 9e-17
Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 18/133 (13%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAF---SRCQN 175
MD ++FRS + +G+DIW +D+AI+VA ADH +ELR RRDGI++RLY +F SRC N
Sbjct: 1 MDSNDFRSILESAGIDIWMLMDVAIAVASADHSDELRRRRDGIVERLYATSFLSSSRCPN 60
Query: 174 CNF---------------XXXXXXXXXXXXXXXXXXXXXXXXXXENQSERFLVDLLQRLV 40
C+ +QS+ L++LLQ L
Sbjct: 61 CDIDDVRETEMQSNPSAEEEKDTCEVLFDDEQKKILEIKEQLEDPHQSKDSLLELLQNLA 120
Query: 39 DMDTTFKTLKETD 1
DMD TF+ L+ETD
Sbjct: 121 DMDITFRALQETD 133
>ref|XP_010252356.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Nelumbo nucifera]
Length = 349
Score = 84.7 bits (208), Expect = 2e-16
Identities = 37/59 (62%), Positives = 49/59 (83%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAFSRCQNCN 169
M+ D+FRS + +SG+D+WT+ID AISVA D++NEL++RRDGII+RLY P S CQNCN
Sbjct: 1 MNFDDFRSILRNSGVDVWTFIDTAISVASLDYKNELKDRRDGIIERLYVPFVSGCQNCN 59
>gb|KJB67900.1| hypothetical protein B456_010G216800 [Gossypium raimondii]
Length = 327
Score = 78.6 bits (192), Expect = 3e-14
Identities = 50/144 (34%), Positives = 71/144 (49%), Gaps = 29/144 (20%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAF-SRCQNCN 169
MDLD+FRS + +G+D+WT+ID AI VA D+ EL+ RRDGI++RLY + ++C++C+
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60
Query: 168 F------XXXXXXXXXXXXXXXXXXXXXXXXXXENQSERF-------------------- 67
F +N+++ F
Sbjct: 61 FGEGSNGYQLNNESNPHEGGEEGVTGSPFSPQSDNENDDFDPYGGLFDDEQKRVLEIKEQ 120
Query: 66 --LVDLLQRLVDMDTTFKTLKETD 1
LVDLLQ L DMD TF+ LKETD
Sbjct: 121 DTLVDLLQSLADMDITFQALKETD 144
>ref|XP_002265433.2| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Vitis vinifera]
gi|731430702|ref|XP_010665135.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit 26c
[Vitis vinifera] gi|296081186|emb|CBI18212.3| unnamed
protein product [Vitis vinifera]
Length = 332
Score = 75.9 bits (185), Expect = 2e-13
Identities = 32/59 (54%), Positives = 42/59 (71%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAFSRCQNCN 169
MD DEFRS + SG+D+WT I+ A+SVA D+ E + RRD I++RLY P SRC NC+
Sbjct: 1 MDCDEFRSILESSGVDVWTLIETAVSVASVDYSEEFKGRRDSIVERLYTPVVSRCLNCD 59
>emb|CDY56541.1| BnaA03g55870D [Brassica napus]
Length = 325
Score = 75.1 bits (183), Expect = 4e-13
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 24/139 (17%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAF-SRCQNCN 169
MDLD+FRS + ++G+D+WT+ID AI VA D+ EL+ RRD I++RLY + ++C+NC+
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 168 F-----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXENQSERFLVD 58
F + SE LV+
Sbjct: 61 FGGGGGEVARANGSVHEEEEEEEDDGYDPFAGLFDDEQKSVLEIKERLEDPDLSEEDLVE 120
Query: 57 LLQRLVDMDTTFKTLKETD 1
LLQ L DM+ TF+ L+ETD
Sbjct: 121 LLQNLDDMEITFQALQETD 139
>ref|XP_015170046.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Solanum tuberosum]
Length = 131
Score = 71.2 bits (173), Expect = 6e-13
Identities = 45/129 (34%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAFSRCQNC-- 172
M+LDE RS + +S +D+W+ ID AISVA DH NELR+RRD I+++LY P S N
Sbjct: 1 MELDELRSILKNSSVDLWSLIDTAISVAILDHGNELRSRRDAIVEKLYAPLLSNNSNSDR 60
Query: 171 ---------------NFXXXXXXXXXXXXXXXXXXXXXXXXXXENQSERFLVDLLQRLVD 37
+ NQSE LVD L+ L +
Sbjct: 61 NYEIPKKIERNIDDDHKFKIEEKSNEEDVEISKILRIKNHFEIPNQSENCLVDQLRSLAE 120
Query: 36 MDTTFKTLK 10
MD FK L+
Sbjct: 121 MDINFKVLE 129
>gb|KDO53373.1| hypothetical protein CISIN_1g018587mg [Citrus sinensis]
Length = 286
Score = 72.4 bits (176), Expect = 3e-12
Identities = 33/61 (54%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Frame = -1
Query: 345 MDLDEFRSFILDSGLDIWTWIDMAISVACADHENELRNRRDGIIQRLYEPAF-SRCQNCN 169
MDLD+FRS + +G+D+WT+ID AI VA D+ EL+ RRD I++RLY SRC+NC+
Sbjct: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
Query: 168 F 166
F
Sbjct: 61 F 61