BLASTX nr result
ID: Rehmannia27_contig00043637
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00043637
(749 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_624333.1| replicase polyprotein [Citrus leaf blotch virus... 87 6e-16
gb|ACH73184.1| replicase polyprotein [Dweet mottle virus] 87 6e-16
gb|ACF94740.1| putative replicase polyprotein [Citrus leaf blotc... 87 6e-16
gb|ACF94738.1| putative replicase polyprotein [Citrus leaf blotc... 87 6e-16
gb|AFA43536.1| replicase polyprotein [Citrus leaf blotch virus] 83 1e-14
gb|AFA43534.1| replicase polyprotein [Citrus leaf blotch virus] 83 1e-14
gb|AFA43530.1| replicase polyprotein [Citrus leaf blotch virus] 83 1e-14
gb|AFA43527.1| replicase polyprotein [Citrus leaf blotch virus] 83 1e-14
gb|AKN09002.1| replicase [Apricot vein clearing associated virus] 59 3e-06
gb|AKN08998.1| replicase [Apricot vein clearing associated virus] 59 3e-06
>ref|NP_624333.1| replicase polyprotein [Citrus leaf blotch virus]
gi|81964041|sp|Q91QZ3.1|RDRP_CLBVS RecName: Full=RNA
replication polyprotein; AltName: Full=ORF1 protein;
Includes: RecName: Full=Viral methyltransferase;
Includes: RecName: Full=Putative Fe(2+) 2-oxoglutarate
dioxygenase; Includes: RecName: Full=Protease; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=Helicase gi|14270249|emb|CAC39422.1|
hypothetical protein [Citrus leaf blotch virus]
Length = 1962
Score = 87.0 bits (214), Expect = 6e-16
Identities = 42/94 (44%), Positives = 56/94 (59%)
Frame = -3
Query: 573 KKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIELFQKWFFSHFHPFSR 394
+K + IY AA+ ++SHSE N FA+SL + KK + +GIEL+ + H HP S+
Sbjct: 18 EKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVGIELYPNGYLPHSHPLSK 77
Query: 393 TPENHILCDVSPGVVNADSFISCPIKEKKVQCIK 292
ENH+L DV PGVVN + C IKE KV K
Sbjct: 78 IFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFK 111
>gb|ACH73184.1| replicase polyprotein [Dweet mottle virus]
Length = 1962
Score = 87.0 bits (214), Expect = 6e-16
Identities = 42/94 (44%), Positives = 56/94 (59%)
Frame = -3
Query: 573 KKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIELFQKWFFSHFHPFSR 394
+K + IY AA+ ++SHSE N FA+SL + KK + +GIEL+ + H HP S+
Sbjct: 18 EKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVGIELYPNGYLPHSHPLSK 77
Query: 393 TPENHILCDVSPGVVNADSFISCPIKEKKVQCIK 292
ENH+L DV PGVVN + C IKE KV K
Sbjct: 78 IFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFK 111
>gb|ACF94740.1| putative replicase polyprotein [Citrus leaf blotch virus]
Length = 1962
Score = 87.0 bits (214), Expect = 6e-16
Identities = 42/94 (44%), Positives = 56/94 (59%)
Frame = -3
Query: 573 KKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIELFQKWFFSHFHPFSR 394
+K + IY AA+ ++SHSE N FA+SL + KK + +GIEL+ + H HP S+
Sbjct: 18 EKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVGIELYPNGYLPHSHPLSK 77
Query: 393 TPENHILCDVSPGVVNADSFISCPIKEKKVQCIK 292
ENH+L DV PGVVN + C IKE KV K
Sbjct: 78 IFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFK 111
>gb|ACF94738.1| putative replicase polyprotein [Citrus leaf blotch virus]
Length = 1962
Score = 87.0 bits (214), Expect = 6e-16
Identities = 42/94 (44%), Positives = 56/94 (59%)
Frame = -3
Query: 573 KKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIELFQKWFFSHFHPFSR 394
+K + IY AA+ ++SHSE N FA+SL + KK + +GIEL+ + H HP S+
Sbjct: 18 EKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVGIELYPNGYLPHSHPLSK 77
Query: 393 TPENHILCDVSPGVVNADSFISCPIKEKKVQCIK 292
ENH+L DV PGVVN + C IKE KV K
Sbjct: 78 IFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFK 111
>gb|AFA43536.1| replicase polyprotein [Citrus leaf blotch virus]
Length = 1987
Score = 83.2 bits (204), Expect(2) = 1e-14
Identities = 40/95 (42%), Positives = 56/95 (58%)
Frame = -3
Query: 573 KKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIELFQKWFFSHFHPFSR 394
+K + +Y AA+ ++SHSE N FA++L + KK + +GIEL+ + H HP S+
Sbjct: 18 EKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVGIELYPNGYMPHSHPLSK 77
Query: 393 TPENHILCDVSPGVVNADSFISCPIKEKKVQCIKS 289
ENHIL DV P VV+ I C IKE KV K+
Sbjct: 78 IFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKN 112
Score = 24.6 bits (52), Expect(2) = 1e-14
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 622 ASLSYKNAIECMLGDFKKK 566
A +S K AIE +LG+F+KK
Sbjct: 2 ALMSNKTAIESILGNFEKK 20
>gb|AFA43534.1| replicase polyprotein [Citrus leaf blotch virus]
Length = 1987
Score = 83.2 bits (204), Expect(2) = 1e-14
Identities = 40/95 (42%), Positives = 56/95 (58%)
Frame = -3
Query: 573 KKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIELFQKWFFSHFHPFSR 394
+K + +Y AA+ ++SHSE N FA++L + KK + +GIEL+ + H HP S+
Sbjct: 18 EKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVGIELYPNGYMPHSHPLSK 77
Query: 393 TPENHILCDVSPGVVNADSFISCPIKEKKVQCIKS 289
ENHIL DV P VV+ I C IKE KV K+
Sbjct: 78 IFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKN 112
Score = 24.6 bits (52), Expect(2) = 1e-14
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 622 ASLSYKNAIECMLGDFKKK 566
A +S K AIE +LG+F+KK
Sbjct: 2 ALMSNKTAIESILGNFEKK 20
>gb|AFA43530.1| replicase polyprotein [Citrus leaf blotch virus]
Length = 1987
Score = 83.2 bits (204), Expect(2) = 1e-14
Identities = 40/95 (42%), Positives = 56/95 (58%)
Frame = -3
Query: 573 KKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIELFQKWFFSHFHPFSR 394
+K + +Y AA+ ++SHSE N FA++L + KK + +GIEL+ + H HP S+
Sbjct: 18 EKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVGIELYPNGYMPHSHPLSK 77
Query: 393 TPENHILCDVSPGVVNADSFISCPIKEKKVQCIKS 289
ENHIL DV P VV+ I C IKE KV K+
Sbjct: 78 IFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKN 112
Score = 24.6 bits (52), Expect(2) = 1e-14
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 622 ASLSYKNAIECMLGDFKKK 566
A +S K AIE +LG+F+KK
Sbjct: 2 ALMSNKTAIESILGNFEKK 20
>gb|AFA43527.1| replicase polyprotein [Citrus leaf blotch virus]
Length = 1987
Score = 83.2 bits (204), Expect(2) = 1e-14
Identities = 40/95 (42%), Positives = 56/95 (58%)
Frame = -3
Query: 573 KKNDIKRIYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIELFQKWFFSHFHPFSR 394
+K + +Y AA+ ++SHSE N FA++L + KK + +GIEL+ + H HP S+
Sbjct: 18 EKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVGIELYPNGYMPHSHPLSK 77
Query: 393 TPENHILCDVSPGVVNADSFISCPIKEKKVQCIKS 289
ENHIL DV P VV+ I C IKE KV K+
Sbjct: 78 IFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKN 112
Score = 24.6 bits (52), Expect(2) = 1e-14
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 622 ASLSYKNAIECMLGDFKKK 566
A +S K AIE +LG+F+KK
Sbjct: 2 ALMSNKTAIESILGNFEKK 20
>gb|AKN09002.1| replicase [Apricot vein clearing associated virus]
Length = 2021
Score = 58.5 bits (140), Expect = 3e-06
Identities = 33/95 (34%), Positives = 51/95 (53%)
Frame = -3
Query: 552 IYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIELFQKWFFSHFHPFSRTPENHIL 373
I A ++L +LN FA+ + LK+ L+ LG+ L + +H HPFS+ ENHIL
Sbjct: 26 IISSAYKSLKQQLDLNGGHFAYEVSASLKEKLSSLGVPLHPTPYLAHSHPFSKMLENHIL 85
Query: 372 CDVSPGVVNADSFISCPIKEKKVQCIKSNPNLEVL 268
+V PG + S++ IK KV+ + + VL
Sbjct: 86 LNVLPGHITG-SWVFSSIKPSKVESLATKGKKSVL 119
>gb|AKN08998.1| replicase [Apricot vein clearing associated virus]
Length = 2021
Score = 58.5 bits (140), Expect = 3e-06
Identities = 33/95 (34%), Positives = 51/95 (53%)
Frame = -3
Query: 552 IYKPAAEALVSHSELNNSLFAHSLEPFLKKNLTGLGIELFQKWFFSHFHPFSRTPENHIL 373
I A ++L +LN FA+ + LK+ L+ LG+ L + +H HPFS+ ENHIL
Sbjct: 26 IISSAYKSLKQQLDLNGGHFAYEVSASLKEKLSSLGVPLHPTPYLAHSHPFSKMLENHIL 85
Query: 372 CDVSPGVVNADSFISCPIKEKKVQCIKSNPNLEVL 268
+V PG + S++ IK KV+ + + VL
Sbjct: 86 LNVLPGHITG-SWVFSSIKPSKVESLATKGKKSVL 119