BLASTX nr result
ID: Rehmannia27_contig00043457
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00043457
(1599 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo... 288 e-138
gb|KYP42321.1| Copia protein [Cajanus cajan] 296 e-136
ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r... 290 e-135
gb|KYP61299.1| Retrovirus-related Pol polyprotein from transposo... 278 e-133
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo... 284 e-133
ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794... 276 e-133
gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposo... 296 e-133
ref|XP_009338880.1| PREDICTED: uncharacterized protein LOC103931... 291 e-132
gb|KYP40677.1| Retrovirus-related Pol polyprotein from transposo... 290 e-132
gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposo... 293 e-132
gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposo... 267 e-131
gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposo... 281 e-130
gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposo... 271 e-130
ref|XP_013630685.1| PREDICTED: uncharacterized protein LOC106336... 288 e-128
gb|AJY78065.1| putative polyprotein [Glycine max] 274 e-127
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 270 e-127
gb|KYP70921.1| Retrovirus-related Pol polyprotein from transposo... 263 e-127
gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposo... 267 e-127
gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposo... 274 e-126
gb|KYP38774.1| Retrovirus-related Pol polyprotein from transposo... 279 e-126
>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1316
Score = 288 bits (736), Expect(4) = e-138
Identities = 151/296 (51%), Positives = 187/296 (63%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
FSPVAKL TVRL+++LA I W L QLDVNNAFLHG L+E++YM P G + G+VC
Sbjct: 884 FSPVAKLTTVRLLLSLAAINNWHLKQLDVNNAFLHGDLNEEVYMQLPPGLTPSFPGQVCR 943
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
LQRSLYGLKQAS QW A + L Q G+ S DH LF+K S G
Sbjct: 944 LQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLFLKCSPATTTAILIYVDDIVLAG 1003
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
+I L L + F IKDLG KYFLG+ +ARN G L QRKYILD+L D G+L
Sbjct: 1004 NDLTEIHHLTSLLHTTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKYILDLLSDTGMLAS 1063
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDPYS 1023
KP TP + L G PL + +R+LVGRL+YL TRPDITY VQQLSQFV++P +
Sbjct: 1064 KPVSTPMDYSMHLSASSGTPLTDTAAYRRLVGRLIYLTNTRPDITYAVQQLSQFVSNPTT 1123
Query: 1024 SHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFL 1191
+H +A +LR+LKG P G+F S S + L A+ D+DWA DTR+SITG+ V+L
Sbjct: 1124 AHRQALFRILRYLKGTPGSGIFLSVNSSVQLRAFSDSDWAGCPDTRRSITGFAVYL 1179
Score = 156 bits (394), Expect(4) = e-138
Identities = 78/137 (56%), Positives = 97/137 (70%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQ 1367
LG LISWK+KKQ TVSRSS+EAEYRAL +T CELQWLS+L D H+ + L CDNQ
Sbjct: 1179 LGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDPISPSILYCDNQ 1238
Query: 1368 AAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAA 1547
+A+ I N +FHERTKH+EIDCH+VR+ +G L L +SS QLAD TKP + F +
Sbjct: 1239 SALQIASNPVFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSQQLADILTKPLSPFVFRS 1298
Query: 1548 ICSKLGLFDIHNPT*GG 1598
CSKLG+ +IH+ GG
Sbjct: 1299 HCSKLGMLNIHSQLEGG 1315
Score = 86.3 bits (212), Expect(4) = e-138
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +2
Query: 122 VSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDYLD 301
+ L +NTW L+ LPP K AIGC+WVYKVK K DGS+DRYKA LVAKG+ Q+ G+D+ D
Sbjct: 823 IFALEANNTWVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFD 882
Query: 302 SF 307
+F
Sbjct: 883 TF 884
Score = 35.0 bits (79), Expect(4) = e-138
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 12 LSDAHHVVLANVSLIQEHRTYAQASKCVEWVVAMQRELVALE 137
LS + H + ++S + E + +A+ASK W+ AM E+ ALE
Sbjct: 786 LSPSFHHYVFSISSVTEPKNFAEASKSDSWLKAMHEEIFALE 827
>gb|KYP42321.1| Copia protein [Cajanus cajan]
Length = 1456
Score = 296 bits (759), Expect(3) = e-136
Identities = 151/300 (50%), Positives = 198/300 (66%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
FSPV KL TVR +++LA W L QLDV+NAFLHG L E++YM PP G+ + VC
Sbjct: 1028 FSPVVKLSTVRFLLSLAAAHNWFLHQLDVDNAFLHGDLFEEVYMKPPPGFKLSHPRLVCK 1087
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
L +SLYGLKQAS QWN + L F QS+ DH LFIK S TG
Sbjct: 1088 LHKSLYGLKQASRQWNQKLTEALISLNFIQSSTDHSLFIKKSHSSITALLVYVDDVVLTG 1147
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
+I +K YL + F IKDLG K+FLG+ IAR+ G LNQRKY L++L + GL C
Sbjct: 1148 NDMAEISAVKAYLHAQFHIKDLGPLKFFLGLEIARSQSGLILNQRKYCLELLSEHGLTDC 1207
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDPYS 1023
KP TP +KL +G+PLD+P FR+L+GRLLYL TRPDI++ VQQLSQFV+ P +
Sbjct: 1208 KPVSTPIDASVKLYASEGLPLDDPTIFRRLIGRLLYLTNTRPDISFAVQQLSQFVDSPRA 1267
Query: 1024 SHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFLVLAL 1203
+H++AAL +LR+LK P++GLFY SQ+ ++A+ D+DWAS +TR+S+TG+C+F AL
Sbjct: 1268 THFQAALRILRYLKSSPALGLFYPSQTEHRIQAFSDSDWASCPNTRRSVTGFCIFYGSAL 1327
Score = 159 bits (401), Expect(3) = e-136
Identities = 77/133 (57%), Positives = 96/133 (72%)
Frame = +3
Query: 1191 GSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQA 1370
GS LISWK+KKQ+TVSRSS+EAEYRAL S CELQWL FLC DL +++P ++ CD+Q+
Sbjct: 1324 GSALISWKSKKQSTVSRSSSEAEYRALASVTCELQWLLFLCHDLSINIPTPFSIFCDSQS 1383
Query: 1371 AVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAAI 1550
A++I KN FHERTKH+E+DCHL R + G + L H+ S+ QLAD FTK F
Sbjct: 1384 AIYIAKNPTFHERTKHIEVDCHLTRLKIQQGLIHLFHVPSKSQLADVFTKALYPRNFTEA 1443
Query: 1551 CSKLGLFDIHNPT 1589
SKL L DI+NPT
Sbjct: 1444 VSKLCLIDIYNPT 1456
Score = 82.4 bits (202), Expect(3) = e-136
Identities = 37/64 (57%), Positives = 46/64 (71%)
Frame = +2
Query: 116 AGVSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDY 295
A + L + TW L LP GK+ +GCKWVY+VK K DGSV+RYKA LVAKGF Q G+DY
Sbjct: 965 AELQALEKNQTWSLVRLPEGKRPVGCKWVYRVKYKVDGSVERYKARLVAKGFTQTEGVDY 1024
Query: 296 LDSF 307
++F
Sbjct: 1025 FETF 1028
>ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
from transposon TNT 1-94 [Gossypium raimondii]
Length = 683
Score = 290 bits (743), Expect(4) = e-135
Identities = 151/302 (50%), Positives = 198/302 (65%), Gaps = 2/302 (0%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
FSPVAK+ TVRL++ALAT + W + QLDVNNAFLHG L+ED+YMLPP G+ +VC
Sbjct: 254 FSPVAKITTVRLLLALATSRHWHIQQLDVNNAFLHGDLNEDVYMLPPPGFSHDST-KVCK 312
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
L +S+YGLKQAS QW ++ L G+ QS DH +F K TG
Sbjct: 313 LHKSIYGLKQASRQWFSKLTTALISLGYIQSTADHSMFTKKHSEDFTVLLIYVDDIILTG 372
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
T S +I ++KQ+LD+ F IKDLG KYFLG+ +AR + G ++QRKY L+ILQ+ G + C
Sbjct: 373 TSSPEIMKVKQFLDTTFRIKDLGDLKYFLGLEVARTSQGIHISQRKYALEILQESGFIEC 432
Query: 844 KPTHTPFPPG--LKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDP 1017
KP TP KL DG L + +RQLVG+LLYL TR D+T+ VQQLSQF++ P
Sbjct: 433 KPAKTPMATKSVYKLTSTDGELLSDITSYRQLVGKLLYLTSTRLDLTFAVQQLSQFMDKP 492
Query: 1018 YSSHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFLVL 1197
++H +AA +LR+LKG PS GLFY + S L+A+ D+DWA +TR+SITGYC+F
Sbjct: 493 TTNHLQAAHRVLRYLKGCPSTGLFYPASSSFELKAFSDSDWAGCPETRRSITGYCIFFGE 552
Query: 1198 AL 1203
AL
Sbjct: 553 AL 554
Score = 147 bits (371), Expect(4) = e-135
Identities = 71/132 (53%), Positives = 90/132 (68%)
Frame = +3
Query: 1191 GSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQA 1370
G LISW+ KKQ TVSRSS+EAEYRAL STVCE+QWL +L DLH+ + + CDN++
Sbjct: 551 GEALISWRAKKQPTVSRSSSEAEYRALASTVCEVQWLHYLLCDLHVPISHATPVFCDNKS 610
Query: 1371 AVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAAI 1550
+ I N FHERTKH+EIDCH+VR + + L +S QLAD FTK A PF +
Sbjct: 611 TIQIASNPTFHERTKHIEIDCHIVREKLQKDIVHLLPCTSSAQLADLFTKALAAQPFQDM 670
Query: 1551 CSKLGLFDIHNP 1586
SKLG+ +IH+P
Sbjct: 671 ISKLGMLNIHSP 682
Score = 79.7 bits (195), Expect(4) = e-135
Identities = 35/64 (54%), Positives = 48/64 (75%)
Frame = +2
Query: 116 AGVSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDY 295
A ++ L +NTW ++ LPPGK GCKWV++VK + DGS +RYKA LVAKG+ Q+ G+DY
Sbjct: 192 AEINALEQNNTWTMTTLPPGKTPXGCKWVFRVKHRADGSTERYKARLVAKGYTQI-GVDY 250
Query: 296 LDSF 307
D+F
Sbjct: 251 FDTF 254
Score = 37.4 bits (85), Expect(4) = e-135
Identities = 24/45 (53%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 9 NLSDAH-HVVLANVSLIQEHRTYAQASKCVEWVVAMQRELVALEQ 140
NLS H H LA +S E +TY QASK W AMQ E+ ALEQ
Sbjct: 156 NLSPQHLHFTLA-ISASIEPKTYKQASKFTHWNEAMQAEINALEQ 199
>gb|KYP61299.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 515
Score = 278 bits (711), Expect(4) = e-133
Identities = 147/296 (49%), Positives = 182/296 (61%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
FSPVAKL VRL+++L I W L QLDVNN+FLHG L+E++YM P G + G+VC
Sbjct: 83 FSPVAKLTIVRLLLSLVAIHNWHLKQLDVNNSFLHGDLNEEVYMQLPPGITPSFPGQVCR 142
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
LQRSLYGLKQAS QW A + L Q G+ S DH LF+K S G
Sbjct: 143 LQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLFLKCSPATITAILIYVDDLVLAG 202
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
+I L L + F IKDLG KYFLG+ +ARN G L QRKY LD+L D G+L
Sbjct: 203 NDLTEIHHLTSLLHNTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKYTLDLLSDTGMLAS 262
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDPYS 1023
KP TP L G PL + +R+LVGRL+YL TRPDITY VQQLSQFV +P +
Sbjct: 263 KPVSTPMDYSTHLFASSGTPLTDTAAYRRLVGRLIYLTNTRPDITYAVQQLSQFVTNPTT 322
Query: 1024 SHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFL 1191
+H +A +LR+LKG P G+F S S + L A+ D+DWA DTR+SITG+ V+L
Sbjct: 323 AHRQALFRILRYLKGTPGSGIFLSVNSSVQLRAFSDSDWAGCPDTRRSITGFAVYL 378
Score = 159 bits (401), Expect(4) = e-133
Identities = 81/137 (59%), Positives = 97/137 (70%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQ 1367
LG LISWK+KKQ TVSRSS+EAEYRAL +T CELQWLS+L D H+ L L CDNQ
Sbjct: 378 LGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDLIRPSILYCDNQ 437
Query: 1368 AAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAA 1547
A+ I N IFHERTKH+EIDCH+VR+ +G L L +SS LQLAD TKP + F +
Sbjct: 438 FALQISSNPIFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSLQLADILTKPLSPFVFRS 497
Query: 1548 ICSKLGLFDIHNPT*GG 1598
CSKLG+ +IH+ GG
Sbjct: 498 HCSKLGMLNIHSQLEGG 514
Score = 87.0 bits (214), Expect(4) = e-133
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +2
Query: 122 VSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDYLD 301
+S L +NTW L+ LPP K AIGC+WVYK K K DGS+DRYKA LVAKG+ Q+ G+D+ D
Sbjct: 22 ISALEANNTWVLTTLPPHKTAIGCRWVYKAKHKADGSIDRYKARLVAKGYTQMEGLDFFD 81
Query: 302 SF 307
+F
Sbjct: 82 TF 83
Score = 26.2 bits (56), Expect(4) = e-133
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 60 EHRTYAQASKCVEWVVAMQRELVALE 137
E + + +ASK W+ AM E+ ALE
Sbjct: 1 EPKNFVEASKSDSWLKAMHEEISALE 26
>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1427
Score = 284 bits (727), Expect(4) = e-133
Identities = 147/296 (49%), Positives = 196/296 (66%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
F+PVAKL TVR+++A+A+ + W L QLD+NNAFLHG L ED+YM P+G + K VC
Sbjct: 984 FAPVAKLSTVRMLLAIASCQHWELHQLDINNAFLHGDLLEDVYMEIPQGLNIDKPNHVCK 1043
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
L +SLYGLKQAS QW A+ + L + QS HDH LF KH G
Sbjct: 1044 LNKSLYGLKQASRQWFAKLSSFLLSLHYKQSQHDHSLFTKHHGTHFTVILIYVDDLIIAG 1103
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
T S++I+ +KQ LD F IKDLG +YFLG+ IAR+ G +L+QRKY LD+L + L
Sbjct: 1104 TDSEEINHIKQSLDVKFKIKDLGPLRYFLGLEIARSHLGISLSQRKYTLDLLDETSFLAG 1163
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDPYS 1023
KP TP G +L P ++P +R+L+G+LLYL TRPDI+Y VQQLSQF++ P
Sbjct: 1164 KPVLTPIIKGTRLSHTTDSPYEDPAGYRRLIGKLLYLITTRPDISYSVQQLSQFLSCPQQ 1223
Query: 1024 SHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFL 1191
SH++AA+ +LR+LKG P GLFY + S L L+A+ D+DWAS DTR+S++GY +FL
Sbjct: 1224 SHYQAAIRVLRYLKGNPGQGLFYPADSPLQLKAFSDSDWASCPDTRRSLSGYSIFL 1279
Score = 151 bits (381), Expect(4) = e-133
Identities = 73/133 (54%), Positives = 93/133 (69%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQ 1367
LG+ LISWK KKQ+T+SRSS+EAEYRAL +T CE+QWL++L D + L CDNQ
Sbjct: 1279 LGNSLISWKCKKQSTISRSSSEAEYRALAATACEIQWLTYLLQDFSVPFTTPALLYCDNQ 1338
Query: 1368 AAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAA 1547
+A HI N +FHERTKH+EIDCHLVR ++G L I+S QLAD TKP PF
Sbjct: 1339 SARHIASNAVFHERTKHIEIDCHLVREKLQAGLFHLLPIASSHQLADILTKPLDPSPFQY 1398
Query: 1548 ICSKLGLFDIHNP 1586
+ SKLG+ +I++P
Sbjct: 1399 LLSKLGVINIYSP 1411
Score = 84.0 bits (206), Expect(4) = e-133
Identities = 36/64 (56%), Positives = 46/64 (71%)
Frame = +2
Query: 116 AGVSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDY 295
A + L + TW + PLPPGK IG KWVYK+K K DGS++RYKA LV KG+ Q+ G+DY
Sbjct: 921 AELDALEHNKTWTIMPLPPGKTPIGSKWVYKIKYKSDGSIERYKARLVVKGYTQIQGLDY 980
Query: 296 LDSF 307
D+F
Sbjct: 981 FDTF 984
Score = 28.9 bits (63), Expect(4) = e-133
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 9 NLSDAHHVVLANVSLIQEHRTYAQASKCVEWVVAMQRELVALE 137
+LS ++ + +++ E T+ QA K WV AMQ EL ALE
Sbjct: 885 SLSASYSRYVLSITTHVEPHTFNQAVKNKVWVEAMQAELDALE 927
>ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794221 [Glycine max]
Length = 1150
Score = 276 bits (706), Expect(4) = e-133
Identities = 146/298 (48%), Positives = 183/298 (61%), Gaps = 2/298 (0%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
FSPVAK+ TVRL++ALA + W L QLDVNNAFLHG L E++YM+ P G AK G+VC
Sbjct: 402 FSPVAKITTVRLLLALAALNNWYLRQLDVNNAFLHGGLHEEVYMVLPPGMKSAKPGQVCK 461
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
LQRSLYGLKQAS QW A L GF QS D+ LF +G
Sbjct: 462 LQRSLYGLKQASRQWYARLSTFLAHHGFKQSVADYSLFTLKKANSFTALLVYVDDIVLSG 521
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
I + + LD F IKDLG KYFLG +AR T G + QRKY LD+L D +LHC
Sbjct: 522 NDLSVISSITKLLDDTFKIKDLGNLKYFLGFEVARGTSGINICQRKYALDLLTDTDMLHC 581
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNP--NRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDP 1017
KP TPF +L G L + + +R L+GRL+YL TRPDIT+ VQ LSQF+ P
Sbjct: 582 KPVSTPFDYYTRLHQASGSMLSDSQISSYRCLIGRLIYLTNTRPDITFAVQHLSQFIASP 641
Query: 1018 YSSHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFL 1191
++H+ A +LR++K P +GLF+ S S L L+A+ D+DWA DTRKSITG+ V+L
Sbjct: 642 TTAHYTALYRILRYIKAAPGLGLFFPSTSELQLKAFSDSDWAGCVDTRKSITGFSVYL 699
Score = 151 bits (381), Expect(4) = e-133
Identities = 79/134 (58%), Positives = 97/134 (72%), Gaps = 1/134 (0%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSL-PALVTL*CDN 1364
LGS LISWK+KKQ VSRSS EA YRAL S CE+QWL++L D ++ PALV CDN
Sbjct: 699 LGSSLISWKSKKQAIVSRSSFEAGYRALTSVTCEIQWLTYLLHDFDITYKPALVF--CDN 756
Query: 1365 QAAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFA 1544
++ +HI N +FHERTKH+EIDCH+VR+ SG + L I+SQ QLAD +TK A G F
Sbjct: 757 KSGLHIAVNPVFHERTKHIEIDCHIVRDKLLSGLIKLLPIASQQQLADVYTKALAPGAFR 816
Query: 1545 AICSKLGLFDIHNP 1586
ICSKLG+ DIH+P
Sbjct: 817 FICSKLGMNDIHSP 830
Score = 85.1 bits (209), Expect(4) = e-133
Identities = 37/62 (59%), Positives = 47/62 (75%)
Frame = +2
Query: 122 VSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDYLD 301
+S L +NTW L+ LP K IGCKWVYK+K DGS++RYKA LVAKG+ Q+ G+DYLD
Sbjct: 341 ISALERNNTWVLTDLPQHKNVIGCKWVYKIKHNSDGSIERYKARLVAKGYTQIEGLDYLD 400
Query: 302 SF 307
+F
Sbjct: 401 TF 402
Score = 35.8 bits (81), Expect(4) = e-133
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 6 SNLSDAHHVVLANVSLIQEHRTYAQASKCVEWVVAMQRELVALEQ 140
+ LS ++H + N+S E ++Y +A K WV AM E+ ALE+
Sbjct: 302 NKLSSSYHSFILNISANSEPKSYNEACKHDSWVQAMHDEISALER 346
>gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1013
Score = 296 bits (758), Expect(3) = e-133
Identities = 155/300 (51%), Positives = 194/300 (64%), Gaps = 4/300 (1%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLG---- 471
+SPVAKL TVR+++AL IKGW L QLDVNNAFLHG L E++YM P G
Sbjct: 575 YSPVAKLTTVRVLLALTAIKGWFLEQLDVNNAFLHGDLHEEVYMTLPPGLSVPSSSNTAP 634
Query: 472 EVCHLQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXX 651
+VC L +S+YGLKQAS QW ++ + L G++ S DH LFIK S
Sbjct: 635 KVCKLHKSIYGLKQASRQWYSKLSSALISMGYSPSTADHSLFIKSSSSHFTALLVYVDDI 694
Query: 652 XXTGTHSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVG 831
G +ID +K L F IKDLG +YFLG+ IAR+ G LNQRKY L+IL+DVG
Sbjct: 695 ILAGNDKPEIDFIKAQLHKCFKIKDLGNLRYFLGLEIARSNKGILLNQRKYTLEILEDVG 754
Query: 832 LLHCKPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVN 1011
L KP+ TPF P LKL G P ++ +R+L+GRLLYL TRPDI+YVVQQLSQFV+
Sbjct: 755 FLAAKPSSTPFNPSLKLHSDHGSPYNDETAYRRLIGRLLYLTTTRPDISYVVQQLSQFVS 814
Query: 1012 DPYSSHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFL 1191
P H++AA +LR+LKG GLFYSS + L L A+ D+DWAS + +RKSITG+CVFL
Sbjct: 815 KPLDIHYQAATRILRYLKGSHGRGLFYSSSASLKLSAFADSDWASCSISRKSITGFCVFL 874
Score = 149 bits (376), Expect(3) = e-133
Identities = 74/137 (54%), Positives = 96/137 (70%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQ 1367
LGS LISW++KKQ+T+SRSS+EAEYRAL S CELQWL +L DL SL ++ CDN+
Sbjct: 874 LGSSLISWRSKKQSTISRSSSEAEYRALASLTCELQWLHYLFNDLKTSLNFPTSVFCDNK 933
Query: 1368 AAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAA 1547
+A+++ N FHERTKH+EIDCH++R +S L L + S QLAD FTKP F +
Sbjct: 934 SAIYLAHNPTFHERTKHIEIDCHVIREKIQSRLLHLLPVPSSSQLADAFTKPLHATSFNS 993
Query: 1548 ICSKLGLFDIHNPT*GG 1598
SKLGL+D+H+ GG
Sbjct: 994 FVSKLGLYDVHSSACGG 1010
Score = 81.3 bits (199), Expect(3) = e-133
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = +2
Query: 122 VSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDYLD 301
++ L + TW + LP GK+ IGCKWVYK+K DGS++RYKA LVAKG+ Q G+DYLD
Sbjct: 514 LAALDMNQTWSIVDLPSGKRPIGCKWVYKIKYLSDGSIERYKARLVAKGYSQTEGLDYLD 573
Query: 302 SF 307
++
Sbjct: 574 TY 575
>ref|XP_009338880.1| PREDICTED: uncharacterized protein LOC103931184 [Pyrus x
bretschneideri]
Length = 1143
Score = 291 bits (746), Expect(4) = e-132
Identities = 146/296 (49%), Positives = 192/296 (64%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
F+PVAKL+TVR ++ +A ++ WP Q+DV NAFLHG L E++YMLPP GY + VC
Sbjct: 715 FAPVAKLITVRCLLTVAAVRHWPFHQMDVQNAFLHGELHEEVYMLPPPGYRRQGERVVCR 774
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
L++SLYGLKQAS W +F + +H GF QS D+ LF K TG
Sbjct: 775 LKKSLYGLKQASRSWFQKFSSAIHDIGFIQSRADYSLFTKVYGSSITIVLLYVDDMVITG 834
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
+ I++LKQ+L F IKDLG KYFLG+ +AR+ G A++QRKY LDIL++ GLL
Sbjct: 835 NNDGAINDLKQFLSRCFRIKDLGPLKYFLGVEVARSKAGIAISQRKYTLDILEEAGLLGA 894
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDPYS 1023
KP+ P P L L L +P ++RQ+VG+L+YL +TRP+ITY V LSQF+ +P
Sbjct: 895 KPSKVPMEPDLVLLPTGSDLLKDPTQYRQMVGKLIYLTITRPEITYAVNTLSQFMQEPRR 954
Query: 1024 SHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFL 1191
H +AA LLR+LK P GL +SSQS L+L YCDADWA TR+S+TGYC+FL
Sbjct: 955 HHLDAAHRLLRYLKNAPGQGLLFSSQSKLNLTGYCDADWARCPITRRSVTGYCIFL 1010
Score = 143 bits (361), Expect(4) = e-132
Identities = 70/134 (52%), Positives = 90/134 (67%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQ 1367
LG+ LISWK+KKQ TV+RSSAEAEYR++ + CEL WL +L DL + P L CDNQ
Sbjct: 1010 LGNSLISWKSKKQVTVARSSAEAEYRSMAAATCELTWLRYLLKDLQIIHPNPAKLFCDNQ 1069
Query: 1368 AAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAA 1547
AA+HI N +FHERTKH+E+DCH +R + G + +I + Q+AD FTKP F
Sbjct: 1070 AALHIAVNPVFHERTKHIELDCHTIRERIQRGEIKTAYIHTGEQVADMFTKPLRSPAFHL 1129
Query: 1548 ICSKLGLFDIHNPT 1589
+ KLG+ DIH PT
Sbjct: 1130 LLCKLGVLDIHAPT 1143
Score = 74.7 bits (182), Expect(4) = e-132
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2
Query: 122 VSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDYLD 301
+ L + TW + PL G +AIGCKWV+K+K DG+++RYKA LVAKGF Q GIDY +
Sbjct: 654 LQALEENQTWSMVPLLAGHRAIGCKWVFKIKYHSDGTIERYKARLVAKGFTQREGIDYKE 713
Query: 302 SF 307
+F
Sbjct: 714 TF 715
Score = 37.0 bits (84), Expect(4) = e-132
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +3
Query: 6 SNLSDAHHVVLANVSLIQEHRTYAQASKCVEWVVAMQRELVALEQ 140
++LS AH + NVS E +Y QA +WV AM EL ALE+
Sbjct: 615 ASLSSAHQSFVHNVSHQMEPTSYDQARHDPQWVAAMNNELQALEE 659
>gb|KYP40677.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 810
Score = 290 bits (741), Expect(3) = e-132
Identities = 142/296 (47%), Positives = 197/296 (66%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
FSPVAK+ ++R ++ALA+ W + QLD++NAFLHG LDE++YM PP+G VC
Sbjct: 382 FSPVAKITSIRFLLALASSHNWFIHQLDIDNAFLHGDLDEEVYMRPPQGLRLPSSKLVCK 441
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
L++SLYGLKQAS WN + ++L G+ QS DH LF+ + +G
Sbjct: 442 LEKSLYGLKQASRNWNQKLTSELTLMGYKQSFADHSLFVNFTGSSITILLIYVDDIVLSG 501
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
+I ++K +L + F IKDLG K+FLG+ +AR+ G LNQRKY L+++ + GLL C
Sbjct: 502 NDMTEIKKVKAHLHNKFHIKDLGSLKFFLGLEVARSKKGILLNQRKYCLELIDETGLLGC 561
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDPYS 1023
KP TP P +KL V G L +P FR+L+GRLLYL TRPDI++ VQQLSQFV+ P
Sbjct: 562 KPAPTPADPAMKLHVDHGDLLHDPTVFRRLIGRLLYLTNTRPDISFSVQQLSQFVSKPRE 621
Query: 1024 SHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFL 1191
H +AAL ++R+LKG P +GLFYSS + L ++A+ D+DWA+ TR+S+TGYCVF+
Sbjct: 622 PHMQAALRIVRYLKGAPGLGLFYSSTNPLKIQAFSDSDWATCATTRRSVTGYCVFI 677
Score = 152 bits (384), Expect(3) = e-132
Identities = 74/134 (55%), Positives = 94/134 (70%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQ 1367
+G+ LISWK+KKQ+TVSRSS+EAEYRAL S CELQWL +LC +H+ +P D+Q
Sbjct: 677 IGNSLISWKSKKQSTVSRSSSEAEYRALASLTCELQWLKYLCDSMHIKIPTPFATFSDSQ 736
Query: 1368 AAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAA 1547
+A+ I KN FHERTKH+E+DCHL+R + G L L H+ S QLAD FTK PF
Sbjct: 737 SAIQISKNPTFHERTKHIEVDCHLIRIKIQEGLLHLIHVLSANQLADAFTKALFPKPFHT 796
Query: 1548 ICSKLGLFDIHNPT 1589
SKLGL +I++PT
Sbjct: 797 AISKLGLLNIYHPT 810
Score = 83.2 bits (204), Expect(3) = e-132
Identities = 38/64 (59%), Positives = 46/64 (71%)
Frame = +2
Query: 116 AGVSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDY 295
A + L + TW L LPPGKK IGCKWVY+ K K +G+V+RYKA LVAKGF Q GIDY
Sbjct: 319 AELDALERNRTWSLVTLPPGKKLIGCKWVYRTKHKANGTVERYKARLVAKGFTQTEGIDY 378
Query: 296 LDSF 307
++F
Sbjct: 379 FETF 382
>gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1445
Score = 293 bits (749), Expect(3) = e-132
Identities = 147/296 (49%), Positives = 198/296 (66%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
FSPVAKL TVR ++ALA+ W L QLDV+NAFLHG L+E++YM PP+G VC
Sbjct: 1017 FSPVAKLTTVRFLLALASTNNWFLHQLDVDNAFLHGDLEEEVYMRPPQGLQLPDSKLVCK 1076
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
L++SLYGLKQAS WN + ++L G+ QS+ DH LFIK +G
Sbjct: 1077 LEKSLYGLKQASRNWNQKLNSELLHLGYKQSSADHSLFIKKQGSSITILLVYVDDVVLSG 1136
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
+ +I +KQ+L F IKDLG K+FLG+ +AR+ G LNQRKY L+++ + GLL
Sbjct: 1137 NNFSEIQIVKQHLHQKFQIKDLGPLKFFLGLEVARSKKGIILNQRKYCLELIDESGLLGS 1196
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDPYS 1023
KP TP P +KL G L++P FR+L+GRLLYL TRPDI++ VQQLSQFV+ P
Sbjct: 1197 KPAPTPADPAIKLHADHGSLLNDPTSFRRLIGRLLYLTNTRPDISFSVQQLSQFVSQPRE 1256
Query: 1024 SHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFL 1191
H +AAL ++R+LKG P +GLFY +++ L ++A+ D+DWA+ + TRKS+TGYCVFL
Sbjct: 1257 PHLQAALRIVRYLKGAPGLGLFYPAENHLRIQAFSDSDWATCSTTRKSVTGYCVFL 1312
Score = 144 bits (363), Expect(3) = e-132
Identities = 74/134 (55%), Positives = 91/134 (67%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQ 1367
LG L+SWK+KKQ+TVSRSS+EAEYRAL S CELQWL FL L + +PA ++ D+Q
Sbjct: 1312 LGKSLVSWKSKKQSTVSRSSSEAEYRALASLTCELQWLKFLSDSLFVKIPAPFSVFSDSQ 1371
Query: 1368 AAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAA 1547
+A+ I KN FHERTKH+E+DCHL+R + L L H+ S QLAD FTK F
Sbjct: 1372 SAIQIAKNPTFHERTKHIEVDCHLIRIKLQEELLHLIHVPSANQLADAFTKSLYPKLFLH 1431
Query: 1548 ICSKLGLFDIHNPT 1589
SKLGL +IH PT
Sbjct: 1432 AISKLGLSNIHGPT 1445
Score = 86.3 bits (212), Expect(3) = e-132
Identities = 38/62 (61%), Positives = 46/62 (74%)
Frame = +2
Query: 122 VSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDYLD 301
+ L + TW L LPPG+K IGCKWVY++K K DGSVDR+KA LVAKGF Q GIDY +
Sbjct: 956 LDALNRNRTWSLVSLPPGRKLIGCKWVYRIKYKADGSVDRHKARLVAKGFTQTEGIDYFE 1015
Query: 302 SF 307
+F
Sbjct: 1016 TF 1017
>gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1136
Score = 267 bits (682), Expect(4) = e-131
Identities = 145/296 (48%), Positives = 179/296 (60%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
FSPVAKL TVRL+I+LA I L QLDVNN+FLHG L+E++YM P G + G+VC
Sbjct: 704 FSPVAKLTTVRLLISLAAIHNCHLKQLDVNNSFLHGDLNEEVYMQLPPGITPSFPGQVCR 763
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
LQRSLYGLKQAS QW A + L Q G+ S DH LF+K S G
Sbjct: 764 LQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLFLKCSPAITTAILIYVDDIVLAG 823
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
+I L L + F IKDLG KYFLG+ +ARN G L QRKY LD+L D G+L
Sbjct: 824 NDLTEIHHLTSLLHNTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKYTLDLLSDTGMLAS 883
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDPYS 1023
KP TP L G P + +R+LVGRL+YL TRP I Y VQQLSQFV++P +
Sbjct: 884 KPVSTPMDYSTHLSASSGTPFTDTAAYRRLVGRLIYLPNTRPAIAYAVQQLSQFVSNPPT 943
Query: 1024 SHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFL 1191
+H +A +L +LKG P G+F S S + L A+ D DWA DTR+SITG+ V+L
Sbjct: 944 AHRQALFRILCYLKGTPGSGIFLSVNSSVQLRAFSDYDWAGCPDTRRSITGFAVYL 999
Score = 155 bits (391), Expect(4) = e-131
Identities = 80/137 (58%), Positives = 96/137 (70%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQ 1367
LG LISWK+KKQ TVSRSS+EAEYRAL +T CELQWLS+L D H+ L L CDNQ
Sbjct: 999 LGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDLIRPSILYCDNQ 1058
Query: 1368 AAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAA 1547
A+ I N IFHERTKH+EIDCH+VR+ +G L L +SS LQLAD TKP + F +
Sbjct: 1059 FALQIASNPIFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSLQLADILTKPLSPFVFHS 1118
Query: 1548 ICSKLGLFDIHNPT*GG 1598
SKLG+ +IH+ GG
Sbjct: 1119 HYSKLGMLNIHSQLEGG 1135
Score = 88.6 bits (218), Expect(4) = e-131
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2
Query: 122 VSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDYLD 301
+S L +NTW L+ LPP K AIGC+WVYKVK K DGS+DRYKA LVAKG+ Q+ G+D+ D
Sbjct: 643 ISALEANNTWVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFD 702
Query: 302 SF 307
+F
Sbjct: 703 TF 704
Score = 31.6 bits (70), Expect(4) = e-131
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 12 LSDAHHVVLANVSLIQEHRTYAQASKCVEWVVAMQRELVALE 137
LS + H + ++S + + + + +ASK W+ AM E+ ALE
Sbjct: 606 LSPSFHHYVFSISSVTKPKNFVEASKSDSWLKAMHEEISALE 647
>gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1376
Score = 281 bits (718), Expect(3) = e-130
Identities = 145/296 (48%), Positives = 190/296 (64%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
FSPVAKL TVRL++ALA + W L QLDVNNAFLHG L+E++YM P G +VC
Sbjct: 942 FSPVAKLTTVRLLLALAAVFDWHLKQLDVNNAFLHGDLNEEVYMTLPLGMRPEYSNQVCK 1001
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
LQ+SLYGLKQAS QW A+ + L G+ QSA DH LF+K S G
Sbjct: 1002 LQKSLYGLKQASRQWFAKLSSFLIHHGYHQSASDHSLFMKFSSSSTTALLIYVDDIVLAG 1061
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
+ +I + LD F IKDLG KYFLG+ +ARN G L+QRKY+LDIL D G++
Sbjct: 1062 NNLSEIQLITGLLDVAFKIKDLGNLKYFLGLEVARNKSGIHLSQRKYVLDILSDCGMMAS 1121
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDPYS 1023
+P TP +L G PL +P+ +R+L+GRL+YL TRPDI+YVV LSQF++ P +
Sbjct: 1122 RPVSTPMDYTSRLSASSGTPLADPSSYRRLLGRLIYLTTTRPDISYVVHHLSQFMSAPST 1181
Query: 1024 SHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFL 1191
+H +A +LR+LK P GLF+ + S L L+A+ D+DWA DTR+SITG+ V+L
Sbjct: 1182 AHSQAIFRILRYLKQAPGSGLFFPTNSSLHLKAFSDSDWAGCLDTRRSITGFSVYL 1237
Score = 151 bits (381), Expect(3) = e-130
Identities = 75/137 (54%), Positives = 98/137 (71%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQ 1367
LG LISW++KKQ TVSRSS+EAEYRAL +T ELQWL++L DLH+ + L CDNQ
Sbjct: 1237 LGDSLISWRSKKQPTVSRSSSEAEYRALATTTSELQWLTYLLHDLHVPVHQPALLYCDNQ 1296
Query: 1368 AAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAA 1547
+A+HI N +FHERTKH++IDCHLVR +SG L L ++S QLAD FTK + F A
Sbjct: 1297 SALHIAANQVFHERTKHIDIDCHLVREKLQSGLLKLLPVASPHQLADIFTKSLSPSMFTA 1356
Query: 1548 ICSKLGLFDIHNPT*GG 1598
+ SKLG+ ++++ GG
Sbjct: 1357 LYSKLGMLNLYSQLEGG 1373
Score = 85.9 bits (211), Expect(3) = e-130
Identities = 36/64 (56%), Positives = 49/64 (76%)
Frame = +2
Query: 116 AGVSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDY 295
A + L + TW L+PLPP K+A+GC+W+YK+K DGS++RYKA LVAKG+ QV G+DY
Sbjct: 879 AELEALKMNQTWTLTPLPPHKQAVGCRWIYKIKYNADGSIERYKARLVAKGYTQVEGLDY 938
Query: 296 LDSF 307
L +F
Sbjct: 939 LATF 942
>gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1394
Score = 271 bits (694), Expect(4) = e-130
Identities = 141/295 (47%), Positives = 189/295 (64%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
FSPV KL TVR ++++A W L QLDV+NAFLHG LD ++YM PP G + VC
Sbjct: 966 FSPVVKLTTVRFLLSVAVSHNWFLHQLDVDNAFLHGDLDVEVYMKPPPGLILPEPHLVCK 1025
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
L +SLYGL+QAS Q N++ + L +GF+QS DH LFI+HS TG
Sbjct: 1026 LHKSLYGLRQASRQGNSKLTSALISYGFSQSPADHSLFIRHSSTSFTALLVYVDDIVLTG 1085
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
QDI +K++L F IKDLG K FLG +AR+ G LNQRKY LDIL + G C
Sbjct: 1086 DSIQDIVAVKKFLHHEFRIKDLGNLKLFLGFDVARSQQGLILNQRKYCLDILAEFGFTGC 1145
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDPYS 1023
KP ++P P +KL+ +G + +P +R+L+G+L YL TRPDI++ VQQ+SQF++ P
Sbjct: 1146 KPANSPSNPTVKLKDDEGDLVQDPTAYRRLIGKLQYLTNTRPDISFAVQQVSQFMSKPRY 1205
Query: 1024 SHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVF 1188
SH AA +L++LKG P +GLFY S + ++A+ D+DWA+ TRKS TGYCVF
Sbjct: 1206 SHLNAAFRILKYLKGCPGLGLFYPSANPHRIQAFSDSDWATCCITRKSTTGYCVF 1260
Score = 159 bits (402), Expect(4) = e-130
Identities = 75/133 (56%), Positives = 94/133 (70%)
Frame = +3
Query: 1191 GSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQA 1370
G+CLISWK+KKQ+TVSRSS EAEYRAL S CELQWL ++ DL L +P CDNQ+
Sbjct: 1262 GNCLISWKSKKQSTVSRSSTEAEYRALASVACELQWLKYVADDLCLQIPLPFPTFCDNQS 1321
Query: 1371 AVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAAI 1550
A+ + KN FHERTKH+E+DCHL+R G + L H+ S+ QLAD FTK GPF
Sbjct: 1322 AIQLAKNPSFHERTKHIEVDCHLIRAKILDGLIVLSHVPSKHQLADMFTKSLYPGPFNVN 1381
Query: 1551 CSKLGLFDIHNPT 1589
SK+GL +IH+P+
Sbjct: 1382 LSKMGLLNIHHPS 1394
Score = 78.2 bits (191), Expect(4) = e-130
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +2
Query: 116 AGVSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDY 295
A + L + TW L LPP K+ +GCKWVYK K+ DGS++R+KA LVAKGF Q G+D+
Sbjct: 903 AEIQALERNKTWSLVRLPPKKRVVGCKWVYKTKLNADGSIERHKARLVAKGFTQTEGMDF 962
Query: 296 LDSF 307
++F
Sbjct: 963 FETF 966
Score = 29.6 bits (65), Expect(4) = e-130
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 6 SNLSDAHHVVLANVSLIQEHRTYAQASKCVEWVVAMQRELVALEQ 140
SN SD+H ++S E ++ +A K W AM E+ ALE+
Sbjct: 866 SNCSDSHTAFCMSLSATIEPTSFKEACKHDHWQQAMLAEIQALER 910
>ref|XP_013630685.1| PREDICTED: uncharacterized protein LOC106336398 [Brassica oleracea
var. oleracea]
Length = 1215
Score = 288 bits (736), Expect(3) = e-128
Identities = 148/301 (49%), Positives = 192/301 (63%), Gaps = 5/301 (1%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYD-----KAKL 468
FSPVAK+ T+RL++A+A K W + LDV+NAFL+G LDE+IYM P+GY+ K
Sbjct: 782 FSPVAKIGTLRLLLAVAAAKQWSITHLDVSNAFLNGDLDEEIYMKLPQGYEELTGKKVPP 841
Query: 469 GEVCHLQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXX 648
VC L +SLYGLKQASHQWN + + + GF Q+ DH LF+K+
Sbjct: 842 NSVCRLHKSLYGLKQASHQWNHKLSHVITGDGFKQTHSDHSLFVKYVDKVYLVVLVYVDD 901
Query: 649 XXXTGTHSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDV 828
G ++ K L S F ++DLG AKYFLG IARN G +LNQRKY L+++++
Sbjct: 902 ILIVGNDDDAVERFKTVLKSAFKLRDLGPAKYFLGFEIARNQSGISLNQRKYALELIEEA 961
Query: 829 GLLHCKPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFV 1008
GLL CKP P P +KL + G PL + +R+LVGRLLYL RPDITYVV +LSQ +
Sbjct: 962 GLLGCKPLSVPMKPNVKLSLSTGTPLPDDAVYRRLVGRLLYLTHARPDITYVVHKLSQSM 1021
Query: 1009 NDPYSSHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVF 1188
+ P SH +AA +LR+LK P GLFYS+ L+ AY DADW + TD+R+SITGYCVF
Sbjct: 1022 SAPTDSHLQAATRVLRYLKNDPGQGLFYSASPKLNFTAYSDADWGACTDSRQSITGYCVF 1081
Query: 1189 L 1191
L
Sbjct: 1082 L 1082
Score = 143 bits (361), Expect(3) = e-128
Identities = 68/134 (50%), Positives = 92/134 (68%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQ 1367
LG L+SW++KK++TVSRSS+EAEYR + CEL WL+ L +LH + L CDNQ
Sbjct: 1082 LGDSLVSWRSKKKHTVSRSSSEAEYRTMADATCELIWLTTLLTELHCPRSSPAILFCDNQ 1141
Query: 1368 AAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAA 1547
+A++I N ++HERTKH+EIDCHLVR +SGFL H+ S+LQLAD TKP G F +
Sbjct: 1142 SALYIASNPVYHERTKHVEIDCHLVRQRLQSGFLKTLHVKSELQLADILTKPVQPGLFKS 1201
Query: 1548 ICSKLGLFDIHNPT 1589
+ K+GL + P+
Sbjct: 1202 LVDKIGLHSLCLPS 1215
Score = 78.2 bits (191), Expect(3) = e-128
Identities = 30/59 (50%), Positives = 46/59 (77%)
Frame = +2
Query: 131 LGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDYLDSF 307
L TW + LPPGK+++GCKW++ +K PDG+V+R+K+ +VAKG+ Q+ G+DYLD+F
Sbjct: 724 LEESGTWSVCELPPGKQSVGCKWIHTIKYNPDGTVERHKSRVVAKGYTQLEGLDYLDTF 782
>gb|AJY78065.1| putative polyprotein [Glycine max]
Length = 523
Score = 274 bits (701), Expect(4) = e-127
Identities = 142/296 (47%), Positives = 182/296 (61%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
FSPVAK+ TVR ++A+A IK W L QLDVNNAFLHG L ED+YM P G AK VC
Sbjct: 90 FSPVAKITTVRTLLAVAAIKNWHLHQLDVNNAFLHGDLQEDVYMKIPDGVTCAKPNSVCK 149
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
LQ+SLYGLKQAS +W + N L + G+ QS D+ LF G
Sbjct: 150 LQKSLYGLKQASRKWYEKLTNLLLKEGYIQSISDYSLFTLTKGNTFTALLVYVDDIILAG 209
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
+ D +K LD F IK+LG KYFLG+ +A + G ++QRKY LD+L+D GLL C
Sbjct: 210 DSIDEFDRIKNVLDLAFKIKNLGKLKYFLGLEVAHSRLGITISQRKYCLDLLKDSGLLGC 269
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDPYS 1023
KP TP +KL G P + + +R++VG+LLYLN TRPDI + QQLSQF+ P +
Sbjct: 270 KPASTPLDTSIKLHSAAGTPYADISGYRRIVGKLLYLNTTRPDIAFATQQLSQFMQAPTN 329
Query: 1024 SHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFL 1191
H+ AA +LR+LK P G+F+S S + L Y DADWA D+RKSI+GYC F+
Sbjct: 330 VHFNAACRVLRYLKNNPGQGIFFSRTSEMQLIGYSDADWAGCMDSRKSISGYCFFI 385
Score = 146 bits (369), Expect(4) = e-127
Identities = 75/132 (56%), Positives = 90/132 (68%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQ 1367
+G L+SW+ KKQ TVSRSS+EAEYRAL S CELQWL +L ADL + L TL CDNQ
Sbjct: 385 IGKSLVSWRAKKQATVSRSSSEAEYRALSSAACELQWLLYLFADLRVQLTRTPTLYCDNQ 444
Query: 1368 AAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAA 1547
+AVHI N +FHERTKHLEIDCHLVR G L L +S+ Q+ADF TK A F
Sbjct: 445 SAVHIASNPVFHERTKHLEIDCHLVREKLLKGTLKLLPVSTSDQVADFLTKALAPPKFHD 504
Query: 1548 ICSKLGLFDIHN 1583
SKL + +I++
Sbjct: 505 FVSKLSMINIYH 516
Score = 80.9 bits (198), Expect(4) = e-127
Identities = 35/62 (56%), Positives = 47/62 (75%)
Frame = +2
Query: 122 VSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDYLD 301
++ L + TW++ LPP K IGCKWVYKVK K +G ++RYKA LVAKG++QV GIDY +
Sbjct: 29 LNALAKNCTWKIVELPPHTKPIGCKWVYKVKHKANGQIERYKARLVAKGYNQVEGIDYFE 88
Query: 302 SF 307
+F
Sbjct: 89 TF 90
Score = 27.7 bits (60), Expect(4) = e-127
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 60 EHRTYAQASKCVEWVVAMQRELVAL 134
E ++Y +ASK WV AM+ EL AL
Sbjct: 8 EPQSYEEASKHEHWVTAMKEELNAL 32
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 270 bits (690), Expect(3) = e-127
Identities = 139/295 (47%), Positives = 186/295 (63%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
F+PVAKL TVR++++LA+I+GW L QLDVNNAFL+G L ED+YM P G+ + VC
Sbjct: 1050 FAPVAKLTTVRVLLSLASIQGWHLHQLDVNNAFLNGDLYEDVYMQLPPGFGRKGEHRVCK 1109
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
L +SLYGLKQAS QW + + L GF QS D+ LF +++ G
Sbjct: 1110 LHKSLYGLKQASRQWFLKLSSALKAAGFKQSWSDYSLFXRNTQGRFTTLLVYVDDVILAG 1169
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
+DI E KQ+L S F +KD+G +YFLG+ +AR+ G L QRKY L++L+D G L
Sbjct: 1170 NSLEDIIETKQFLASHFKLKDMGQLRYFLGIEVARSKQGIVLCQRKYALELLEDAGFLGA 1229
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDPYS 1023
KP+ P L L DG L + +++R+LVGRL+YL +TRPD+ Y V LSQF++ P
Sbjct: 1230 KPSRFPVEQSLTLTRGDGAELKDASQYRRLVGRLIYLTITRPDLVYAVHILSQFMDTPRQ 1289
Query: 1024 SHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVF 1188
H +AA +LR++K P G+F S L L AYCDADWA DTR+S TGYC+F
Sbjct: 1290 PHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYCDADWARCKDTRRSTTGYCIF 1344
Score = 149 bits (377), Expect(3) = e-127
Identities = 72/130 (55%), Positives = 93/130 (71%)
Frame = +3
Query: 1191 GSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQA 1370
G+ ISWKTKKQ TVSRSSAEAEYR++ +T CE+ WL L ADL+++ V L CDNQA
Sbjct: 1346 GNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLRSLLADLNVNHAHAVKLFCDNQA 1405
Query: 1371 AVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAAI 1550
A+HI N +FHERTKH+E+DCH+VR + G + HI +Q Q AD FTKP + F+ +
Sbjct: 1406 AIHIASNPVFHERTKHIEMDCHVVREKVQRGLVKTMHIRTQEQPADLFTKPLSSKQFSTL 1465
Query: 1551 CSKLGLFDIH 1580
SKLG+ +IH
Sbjct: 1466 LSKLGVINIH 1475
Score = 87.0 bits (214), Expect(3) = e-127
Identities = 38/62 (61%), Positives = 46/62 (74%)
Frame = +2
Query: 122 VSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDYLD 301
+ L + TW L PLP KK IGCKWVYK+K PDG+++RYKA LVAKGF QV GIDY +
Sbjct: 989 IQALQANKTWSLVPLPSHKKPIGCKWVYKIKYNPDGTIERYKARLVAKGFSQVEGIDYRE 1048
Query: 302 SF 307
+F
Sbjct: 1049 TF 1050
>gb|KYP70921.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1352
Score = 263 bits (671), Expect(4) = e-127
Identities = 139/296 (46%), Positives = 179/296 (60%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
F+PVAKL TV L+++LA I W L QLD+NNAFLHG L+E++YM P G G+VC
Sbjct: 920 FAPVAKLTTVHLLLSLAAIHNWFLKQLDINNAFLHGDLNEEVYMHLPPGLTTTTPGQVCK 979
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
L RSLYGLKQAS QW A + Q GF S+ DH LF+K + G
Sbjct: 980 LNRSLYGLKQASRQWYARLSTFIMQQGFHHSSADHSLFLKFTNSACTALLVYVDDIVLAG 1039
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
+I ++ L F IKDLG YFLG+ +ARN+ L QRKY LDIL D G+L C
Sbjct: 1040 NDLTEIHQITALLHKTFKIKDLGDLTYFLGLEVARNSIEIHLCQRKYTLDILSDTGMLAC 1099
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDPYS 1023
P+ T L G PL +P+ +RQL+GRL+YL T PDIT+ VQ LSQF + P +
Sbjct: 1100 CPSSTLMDYKAALSSDTGTPLTDPSAYRQLIGRLIYLTNTHPDITHAVQHLSQFASKPTT 1159
Query: 1024 SHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFL 1191
H AA +LR+LK P G+F S+ S L L+++ D+DWA DTR+SITG+ V+L
Sbjct: 1160 YHQHAAFRILRYLKQAPGRGIFLSANSSLQLKSFSDSDWAGCMDTRRSITGFAVYL 1215
Score = 146 bits (368), Expect(4) = e-127
Identities = 75/137 (54%), Positives = 92/137 (67%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQ 1367
LG LISWK+KKQ TVSRSS+EAEYRAL ST CE+QWL++L D L L CDNQ
Sbjct: 1215 LGHSLISWKSKKQATVSRSSSEAEYRALASTSCEIQWLTYLLEDFRLQFIRPALLYCDNQ 1274
Query: 1368 AAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAA 1547
+ + I N +FHERTKH+EIDCHLVR +G L L +SS QLAD +TK + F
Sbjct: 1275 SVLQIACNQVFHERTKHIEIDCHLVREKVSNGLLKLLPVSSSAQLADIYTKALSPSRFNE 1334
Query: 1548 ICSKLGLFDIHNPT*GG 1598
+ SKLG+ DI++ GG
Sbjct: 1335 LNSKLGMSDIYSQLAGG 1351
Score = 84.0 bits (206), Expect(4) = e-127
Identities = 36/62 (58%), Positives = 49/62 (79%)
Frame = +2
Query: 122 VSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDYLD 301
++ L +NTW ++ LPP K AIGCKW+YKVK DGSV+R+KA LVAKG+ Q+ G+D+LD
Sbjct: 859 ITALEANNTWTVTSLPPHKTAIGCKWIYKVKHHADGSVERHKARLVAKGYTQLEGLDFLD 918
Query: 302 SF 307
+F
Sbjct: 919 TF 920
Score = 34.7 bits (78), Expect(4) = e-127
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 6 SNLSDAHHVVLANVSLIQEHRTYAQASKCVEWVVAMQRELVALE 137
+ LS + ++SL+ E ++YA+ASK W+ AM E+ ALE
Sbjct: 820 NRLSHPFRHFIMSISLLTEPKSYAEASKSDCWIKAMTDEITALE 863
>gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1311
Score = 267 bits (683), Expect(4) = e-127
Identities = 142/298 (47%), Positives = 182/298 (61%), Gaps = 2/298 (0%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
FSPVAKL VRL++A+ W L QLDVNNAFLHG LDE++YM P G VC
Sbjct: 889 FSPVAKLTIVRLLLAMVAFNQWHLRQLDVNNAFLHGELDEEVYMQVPPGLSVPNSQMVCR 948
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
LQRSLY LKQAS QW + L GF +S DH LF++ + TG
Sbjct: 949 LQRSLYELKQASRQWFTKLSGLLISLGFEKSHSDHSLFLRFTGSIITALLVYVDDIILTG 1008
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
+I ++ + LD F IKDLG KYFLGM IAR++ G L QRKY LDIL D G+L C
Sbjct: 1009 NSESEIQDVIKLLDQAFKIKDLGNLKYFLGMEIARSSSGIHLCQRKYTLDILSDSGMLGC 1068
Query: 844 KPTHTPFPPGLKLRVKDGVPL--DNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDP 1017
+P TP KL+ G PL + + +R+L+GRL+YL TRPDITY VQQLSQ++++P
Sbjct: 1069 QPNVTPMDYSTKLQATAGTPLSTEASSSYRRLIGRLIYLTNTRPDITYAVQQLSQYMSNP 1128
Query: 1018 YSSHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFL 1191
S H +AA +LR+LKG G+F S+ L A+ D+DWA D+RKS TG+ ++L
Sbjct: 1129 TSVHQQAAYRILRYLKGTSGSGIFLSATGTPQLRAFSDSDWAGCQDSRKSTTGFVIYL 1186
Score = 142 bits (359), Expect(4) = e-127
Identities = 69/126 (54%), Positives = 88/126 (69%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQ 1367
LGS +SW++KKQ+TVSRSS+EAEYRA+ +T CELQWL++L D + T+ CDNQ
Sbjct: 1186 LGSSPVSWQSKKQSTVSRSSSEAEYRAMATTTCELQWLTYLLQDFRHNFTKPATIYCDNQ 1245
Query: 1368 AAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAA 1547
+A+ I N +FHERTKH+EIDCH+VR SG L L + S LQLAD FTK F
Sbjct: 1246 SAIQIATNPVFHERTKHIEIDCHIVRQKVTSGLLKLLPVPSSLQLADIFTKALPPTVFQN 1305
Query: 1548 ICSKLG 1565
+C+KLG
Sbjct: 1306 LCNKLG 1311
Score = 85.1 bits (209), Expect(4) = e-127
Identities = 37/64 (57%), Positives = 51/64 (79%)
Frame = +2
Query: 116 AGVSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDY 295
A + L ++NTW+L+ LPP K AIGC+WVYK+K + DGS++RYKA LVAKG+ Q+ G+DY
Sbjct: 826 AELQALQSNNTWKLTLLPPHKTAIGCRWVYKIKHRADGSIERYKARLVAKGYTQMEGLDY 885
Query: 296 LDSF 307
L +F
Sbjct: 886 LYAF 889
Score = 32.3 bits (72), Expect(4) = e-127
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 6 SNLSDAHHVVLANVSLIQEHRTYAQASKCVEWVVAMQRELVALE 137
S LS H + ++S E +YA+AS+ W+ AM+ EL AL+
Sbjct: 789 SRLSHTHKHFVMSISSTVEPSSYAEASQYDCWIKAMEAELQALQ 832
>gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1346
Score = 274 bits (701), Expect(4) = e-126
Identities = 142/296 (47%), Positives = 182/296 (61%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
FSPVAK+ TVR ++A+A IK W L QLDVNNAFLHG L ED+YM P G AK VC
Sbjct: 939 FSPVAKITTVRTLLAVAAIKNWHLHQLDVNNAFLHGDLQEDVYMKIPDGVTCAKPNSVCK 998
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
LQ+SLYGLKQAS +W + N L + G+ QS D+ LF G
Sbjct: 999 LQKSLYGLKQASRKWYEKLTNLLLKEGYIQSISDYSLFTLTKGNTFTALLVYVDDIILAG 1058
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
+ D +K LD F IK+LG KYFLG+ +A + G ++QRKY LD+L+D GLL C
Sbjct: 1059 DSIDEFDRIKNVLDLAFKIKNLGKLKYFLGLEVAHSRLGITISQRKYCLDLLKDSGLLGC 1118
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDPYS 1023
KP TP +KL G P + + +R++VG+LLYLN TRPDI + QQLSQF+ P +
Sbjct: 1119 KPASTPLDTSIKLHSAAGTPYADISGYRRIVGKLLYLNTTRPDIAFATQQLSQFMQAPTN 1178
Query: 1024 SHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFL 1191
H+ AA +LR+LK P G+F+S S + L Y DADWA D+RKSI+GYC F+
Sbjct: 1179 VHFNAACRVLRYLKNNPGQGIFFSRTSEMQLIGYSDADWAGCMDSRKSISGYCFFI 1234
Score = 139 bits (349), Expect(4) = e-126
Identities = 69/111 (62%), Positives = 80/111 (72%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQ 1367
+G L+SW+ KKQ TVSRSS+EAEYRAL S CELQWL +L ADL + L TL CDNQ
Sbjct: 1234 IGKSLVSWRAKKQATVSRSSSEAEYRALSSAACELQWLLYLFADLRVQLTRTPTLYCDNQ 1293
Query: 1368 AAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTK 1520
+AVHI N +FHERTKHLEIDCHLVR G L L +S+ Q+ADF TK
Sbjct: 1294 SAVHIASNPVFHERTKHLEIDCHLVREKLLKGTLKLLPVSTSDQVADFLTK 1344
Score = 80.9 bits (198), Expect(4) = e-126
Identities = 35/62 (56%), Positives = 47/62 (75%)
Frame = +2
Query: 122 VSGLGTDNTWRLSPLPPGKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHGIDYLD 301
++ L + TW++ LPP K IGCKWVYKVK K +G ++RYKA LVAKG++QV GIDY +
Sbjct: 878 LNALAKNCTWKIVELPPHTKPIGCKWVYKVKHKANGQIERYKARLVAKGYNQVEGIDYFE 937
Query: 302 SF 307
+F
Sbjct: 938 TF 939
Score = 32.0 bits (71), Expect(4) = e-126
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 12 LSDAHHVVLANVSLIQEHRTYAQASKCVEWVVAMQRELVAL 134
LS +H +++ E ++Y +ASK WV AM+ EL AL
Sbjct: 841 LSPSHKAFSMSITHCTEPQSYEEASKHEHWVTAMKEELNAL 881
>gb|KYP38774.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 727
Score = 279 bits (713), Expect(4) = e-126
Identities = 142/296 (47%), Positives = 189/296 (63%)
Frame = +1
Query: 304 FSPVAKLVTVRLVIALATIKGWPLVQLDVNNAFLHGYLDEDIYMLPPKGYDKAKLGEVCH 483
F+PVAK+ TVR+++A+A+ + W L QLD+NNAFLHG L+E++YM P+G K VC
Sbjct: 292 FAPVAKITTVRMLLAIASCQKWELHQLDINNAFLHGDLNEEVYMQIPQGLTSPKPNLVCK 351
Query: 484 LQRSLYGLKQASHQWNAEFCNKLHQFGFTQSAHDHCLFIKHSXXXXXXXXXXXXXXXXTG 663
L +SLYGLKQAS QW A+ N L + QS +DH LF KH G
Sbjct: 352 LHKSLYGLKQASKQWFAKLSNFLQTMNYKQSPNDHSLFTKHINNHFTLILVYVDDLIIGG 411
Query: 664 THSQDIDELKQYLDSIFSIKDLGFAKYFLGM*IARNTDGTALNQRKYILDILQDVGLLHC 843
T S +I +K LD+ F IKDLG KYFLG+ +AR+ G L+QRKY LD+L D G L
Sbjct: 412 TDSSEIVSIKGILDAQFKIKDLGHLKYFLGLEVARSHLGIHLSQRKYALDLLSDTGFLAA 471
Query: 844 KPTHTPFPPGLKLRVKDGVPLDNPNRFRQLVGRLLYLNLTRPDITYVVQQLSQFVNDPYS 1023
KP TP K DG P +P +R+LVG+LLYL TRPDI++ VQQLSQ ++ P +
Sbjct: 472 KPVPTPMVKTNKASQSDGTPYADPAGYRRLVGKLLYLTTTRPDISFAVQQLSQHISSPST 531
Query: 1024 SHWEAALHLLRFLKGRPSVGLFYSSQSCLSLEAYCDADWASYTDTRKSITGYCVFL 1191
+H+ AA +LR+LKG P GLFY +QS L+A+ D+DW S + +S++GYC+FL
Sbjct: 532 AHYMAATRVLRYLKGNPGQGLFYPAQSPSQLKAFSDSDWGSCPTSCRSVSGYCIFL 587
Score = 143 bits (361), Expect(4) = e-126
Identities = 70/137 (51%), Positives = 94/137 (68%)
Frame = +3
Query: 1188 LGSCLISWKTKKQNTVSRSSAEAEYRALGSTVCELQWLSFLCADLHLSLPALVTL*CDNQ 1367
LG LISWK KKQ+T+SRSS+EAEYRAL +TVCE+QWL++L D + + L CDNQ
Sbjct: 587 LGDSLISWKCKKQSTISRSSSEAEYRALANTVCEIQWLTYLLHDFVIPFTSHALLYCDNQ 646
Query: 1368 AAVHIVKNFIFHERTKHLEIDCHLVRNLYKSGFLTLHHISSQLQLADFFTKPWARGPFAA 1547
+A +I N +FHERTKH+++DCH++R ++ L I S QLAD TKP PF
Sbjct: 647 SARYIATNPVFHERTKHIDLDCHIIREKLQAKLFHLLPIRSTEQLADILTKPLEPTPFNY 706
Query: 1548 ICSKLGLFDIHNPT*GG 1598
+ SKLG+ +I++P GG
Sbjct: 707 LLSKLGVLNIYSPACGG 723
Score = 72.4 bits (176), Expect(4) = e-126
Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
Frame = +2
Query: 122 VSGLGTDNTWRLSPLPP-----GKKAIGCKWVYKVKMKPDGSVDRYKA*LVAKGFHQVHG 286
+ L + TW L LP GK IG KWVYK+K K DG+++RYKA LVAKG++Q+ G
Sbjct: 226 LDALRLNRTWSLVNLPTVNLPTGKVPIGSKWVYKIKYKSDGTIERYKARLVAKGYNQIEG 285
Query: 287 IDYLDSF 307
+DY D+F
Sbjct: 286 LDYFDTF 292
Score = 30.8 bits (68), Expect(4) = e-126
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 6 SNLSDAH-HVVLANVSLIQEHRTYAQASKCVEWVVAMQRELVAL 134
SNLS H H L SLI+ A K W+ AMQ EL AL
Sbjct: 186 SNLSPTHSHFTLIISSLIEPKNYLELAIKSEHWIKAMQNELDAL 229