BLASTX nr result
ID: Rehmannia27_contig00043334
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00043334
(522 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178... 156 3e-50
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera] 142 6e-49
ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177... 142 1e-48
ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424... 140 1e-47
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 134 7e-47
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo... 134 2e-46
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo... 137 1e-44
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo... 137 1e-44
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo... 124 3e-44
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo... 124 3e-44
gb|KYP61012.1| Retrovirus-related Pol polyprotein from transposo... 122 4e-44
gb|KYP67572.1| Retrovirus-related Pol polyprotein from transposo... 134 9e-44
gb|KYP67563.1| Retrovirus-related Pol polyprotein from transposo... 134 9e-44
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo... 125 2e-43
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo... 134 3e-43
gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposo... 132 6e-43
gb|KYP68414.1| Retrovirus-related Pol polyprotein from transposo... 132 6e-43
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 135 3e-42
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 133 6e-42
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo... 145 8e-42
>ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178344 [Citrus sinensis]
Length = 877
Score = 156 bits (394), Expect(2) = 3e-50
Identities = 68/110 (61%), Positives = 80/110 (72%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGE+R V + ++ G+ FRHPCPY H Q K ERKH HIVE GL+LLA A LPLKFWW+
Sbjct: 587 GGEFRPFVSYLSEQGIQFRHPCPYIHHQNRKIERKHRHIVETGLTLLAQAHLPLKFWWNA 646
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYN 6
IN LPTP L NKSP++ L+H PDYT +KVFGCSC+PYLRPYN
Sbjct: 647 FHTATYLINRLPTPILNNKSPFEKLFHKLPDYTMMKVFGCSCYPYLRPYN 696
Score = 69.3 bits (168), Expect(2) = 3e-50
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GP+ I S G+ YY+ +DDYTRYTWIFPL KS+ S + F +E +IK Q+
Sbjct: 525 GPAPITSSQGYSYYLSILDDYTRYTWIFPLTTKSKTLSAFIDFKNMIENCLNLRIKCLQT 584
Query: 340 DWG 332
DWG
Sbjct: 585 DWG 587
>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
Length = 2203
Score = 142 bits (358), Expect(2) = 6e-49
Identities = 61/111 (54%), Positives = 76/111 (68%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGE+ L K G+ FRHPCP+ HQQ GK ERKH IVE+GL+LLA + LP FWWH
Sbjct: 573 GGEFHPLQSLLQKKGILFRHPCPHVHQQNGKVERKHRSIVEIGLTLLAKSQLPFTFWWHA 632
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYND 3
+N LPTP L K+PY+LL+ + PD+ FLK FGC+C+PYLRPY +
Sbjct: 633 FSTATYLLNRLPTPVLHCKTPYELLFKSSPDFLFLKTFGCACYPYLRPYKN 683
Score = 79.0 bits (193), Expect(2) = 6e-49
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = -3
Query: 517 PSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQSD 338
P+H S DG+KYY+ FVD +T YTWI+P + KS+ SIV+QF V+R+F K+K Q+D
Sbjct: 512 PAHTTSCDGYKYYIAFVDAFTNYTWIYPRQQKSQATSIVLQFIALVDRKFPTKLKCLQTD 571
Query: 337 WG 332
WG
Sbjct: 572 WG 573
Score = 61.6 bits (148), Expect(2) = 1e-16
Identities = 30/94 (31%), Positives = 46/94 (48%)
Frame = -2
Query: 308 FFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHXXXXXXXTIN 129
+ K G+N P T QQ G ERK+ + E+ ++L LP FW +N
Sbjct: 1177 YCNKHGINHNFSAPRTPQQNGVVERKNRTLQEMARTMLNENNLPKYFWAEAVNTSCYVLN 1236
Query: 128 LLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCF 27
+ + K+PY+L + P+ ++ KVFGC CF
Sbjct: 1237 RILLRPILKKTPYELWKNKKPNISYFKVFGCKCF 1270
Score = 51.2 bits (121), Expect(2) = 1e-16
Identities = 27/63 (42%), Positives = 34/63 (53%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GPS PSL G Y VDD++RYTW+ L KSE F +F V+ + G I +S
Sbjct: 1104 GPSRTPSLGGKSYAYVIVDDFSRYTWVLFLSQKSEAFYEFSKFCNKVQNEKGFSITCIRS 1163
Query: 340 DWG 332
D G
Sbjct: 1164 DHG 1166
>ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177515 [Citrus sinensis]
Length = 1143
Score = 142 bits (359), Expect(2) = 1e-48
Identities = 65/110 (59%), Positives = 74/110 (67%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGE+RS V + G+ FRH CPYTH Q G ERKH HI ELGL+LLA A +PLKFWW
Sbjct: 667 GGEFRSFVNYLLAEGIQFRHLCPYTHNQNGLVERKHRHITELGLTLLAQAAMPLKFWWDS 726
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYN 6
IN LPTP L KSPY+ L+ PDY FL+VFGCSCF +LR YN
Sbjct: 727 FHTATYIINRLPTPVLSIKSPYESLFQLSPDYKFLRVFGCSCFLFLREYN 776
Score = 77.4 bits (189), Expect(2) = 1e-48
Identities = 35/63 (55%), Positives = 43/63 (68%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GPS + S G++YYV FVDD TR+TWIFPLK K E + F T +E+QF + IK QS
Sbjct: 605 GPSPVISPQGYRYYVSFVDDCTRFTWIFPLKTKDETLPVFKIFKTQIEKQFSRPIKCLQS 664
Query: 340 DWG 332
DWG
Sbjct: 665 DWG 667
>ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424043 [Ziziphus jujuba]
Length = 1270
Score = 140 bits (352), Expect(2) = 1e-47
Identities = 61/111 (54%), Positives = 77/111 (69%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGEYR +P+ ++G+ FRH CPY HQQ G+AERKH HIVE+GLS LA A +PL +WW
Sbjct: 762 GGEYRCFLPYLQQVGIKFRHSCPYMHQQNGRAERKHRHIVEVGLSFLAQAHMPLLYWWEA 821
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYND 3
IN LPT L SP++LL+ PDY FLKVFG +CFP+LRP+ +
Sbjct: 822 FTSAVYVINRLPTAILDFHSPFELLFKKVPDYDFLKVFGSACFPFLRPFQN 872
Score = 76.6 bits (187), Expect(2) = 1e-47
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GP+ S +G++YY+HF+DDY+R+TWI+P+ KSE I F VER F K+K QS
Sbjct: 700 GPAATVSKEGYRYYIHFIDDYSRFTWIYPMTVKSEALFIFKHFHVMVERLFDTKLKVVQS 759
Query: 340 DWG 332
DWG
Sbjct: 760 DWG 762
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 134 bits (337), Expect(2) = 7e-47
Identities = 61/110 (55%), Positives = 75/110 (68%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGEYRS + T G+ R CPYTH+Q G AERKH HIVE G++LLA A+LP K+W
Sbjct: 634 GGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQASLPFKYWDEA 693
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYN 6
IN LPTP L+NKSP ++L+H P Y+ LKVFGC C+P LRP+N
Sbjct: 694 FRTSVYLINRLPTPVLKNKSPLEVLFHQKPSYSXLKVFGCMCYPNLRPFN 743
Score = 80.1 bits (196), Expect(2) = 7e-47
Identities = 34/63 (53%), Positives = 45/63 (71%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GP+ PS G +YY+HF+D Y+R+TWI+ LK KSE F + + F + VE Q G KIK+ QS
Sbjct: 572 GPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLGHKIKAVQS 631
Query: 340 DWG 332
DWG
Sbjct: 632 DWG 634
>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1165
Score = 134 bits (336), Expect(2) = 2e-46
Identities = 58/110 (52%), Positives = 74/110 (67%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGE++SL K G+ R CPYT Q G+AERKH H+VE GL+LLA A +PL +WW
Sbjct: 494 GGEFKSLSKVLIKTGIQLRESCPYTSAQNGRAERKHRHVVESGLTLLAQAKMPLHYWWEA 553
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYN 6
IN LPT ++NKSPYQ L+ +PDYT +K FGC+C+P L+PYN
Sbjct: 554 FSTAVFLINRLPTQVIKNKSPYQQLFDKNPDYTAMKTFGCACYPCLKPYN 603
Score = 79.0 bits (193), Expect(2) = 2e-46
Identities = 35/63 (55%), Positives = 47/63 (74%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GP+ I S+ GFKYYV F+DD++R+TWI+PLK KS+VF +QF VE QF ++IK+ Q
Sbjct: 432 GPAPISSVSGFKYYVLFLDDWSRFTWIYPLKQKSDVFQAFIQFRNLVENQFNKRIKTLQC 491
Query: 340 DWG 332
D G
Sbjct: 492 DGG 494
>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1408
Score = 137 bits (346), Expect(2) = 1e-44
Identities = 61/110 (55%), Positives = 76/110 (69%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGEYRS + ++G+ R CP+TH Q G AERKH HIVELGL+L+A A LP++FW H
Sbjct: 628 GGEYRSFTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHS 687
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYN 6
IN LP+ S+QN PY L+H PDY L++FGCSCFP+LRPYN
Sbjct: 688 FLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYN 737
Score = 68.9 bits (167), Expect(2) = 1e-44
Identities = 29/63 (46%), Positives = 44/63 (69%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GP+ + S G++YYV FVD +TR+TWI+ LK K++ F++ QF V+ Q+ IK+ Q+
Sbjct: 566 GPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQT 625
Query: 340 DWG 332
DWG
Sbjct: 626 DWG 628
>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1073
Score = 137 bits (346), Expect(2) = 1e-44
Identities = 61/110 (55%), Positives = 76/110 (69%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGEYRS + ++G+ R CP+TH Q G AERKH HIVELGL+L+A A LP++FW H
Sbjct: 293 GGEYRSFTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHS 352
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYN 6
IN LP+ S+QN PY L+H PDY L++FGCSCFP+LRPYN
Sbjct: 353 FLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYN 402
Score = 68.9 bits (167), Expect(2) = 1e-44
Identities = 29/63 (46%), Positives = 44/63 (69%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GP+ + S G++YYV FVD +TR+TWI+ LK K++ F++ QF V+ Q+ IK+ Q+
Sbjct: 231 GPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQT 290
Query: 340 DWG 332
DWG
Sbjct: 291 DWG 293
>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1358
Score = 124 bits (310), Expect(2) = 3e-44
Identities = 56/109 (51%), Positives = 70/109 (64%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGEYR+ F G+ R CP+TH Q G ERKH HIVE+GL+LL HA+LPLKFW
Sbjct: 570 GGEYRAFTSFLATNGIQHRVICPHTHHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFA 629
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPY 9
IN LP+ +L P+ L++ PDY FL+ FGC+CFP+LRPY
Sbjct: 630 FTTAVYLINRLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACFPFLRPY 678
Score = 81.6 bits (200), Expect(2) = 3e-44
Identities = 36/63 (57%), Positives = 44/63 (69%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GPSHI S G+ YYV F+D +++YTWI+PLK K+E S+ QF E QF KIKS QS
Sbjct: 508 GPSHITSFSGYLYYVAFIDAFSKYTWIYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQS 567
Query: 340 DWG 332
DWG
Sbjct: 568 DWG 570
>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1279
Score = 124 bits (310), Expect(2) = 3e-44
Identities = 56/109 (51%), Positives = 70/109 (64%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGEYR+ F G+ R CP+TH Q G ERKH HIVE+GL+LL HA+LPLKFW
Sbjct: 491 GGEYRAFTSFLATNGIQHRVICPHTHHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFA 550
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPY 9
IN LP+ +L P+ L++ PDY FL+ FGC+CFP+LRPY
Sbjct: 551 FTTAVYLINRLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACFPFLRPY 599
Score = 81.6 bits (200), Expect(2) = 3e-44
Identities = 36/63 (57%), Positives = 44/63 (69%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GPSHI S G+ YYV F+D +++YTWI+PLK K+E S+ QF E QF KIKS QS
Sbjct: 429 GPSHITSFSGYLYYVAFIDAFSKYTWIYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQS 488
Query: 340 DWG 332
DWG
Sbjct: 489 DWG 491
>gb|KYP61012.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 340
Score = 122 bits (307), Expect(2) = 4e-44
Identities = 56/109 (51%), Positives = 69/109 (63%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGEYR+ F G+ R CP+TH Q G ERKH HIVE+GL+LL HA+LPLKFW
Sbjct: 221 GGEYRAFTSFLATNGIKHRVICPHTHHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFS 280
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPY 9
IN LP+ +L P+ L++ PDY FL+ FGC CFP+LRPY
Sbjct: 281 FTTDVYLINRLPSDALNFNVPFTTLFNKSPDYKFLRTFGCVCFPFLRPY 329
Score = 82.4 bits (202), Expect(2) = 4e-44
Identities = 38/63 (60%), Positives = 44/63 (69%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GPSHI S G+ YYV F+D +++YTWI+PLK K E SI QF VE QF KIKS QS
Sbjct: 159 GPSHITSFSGYLYYVAFIDAFSKYTWIYPLKSKVETLSIFQQFKAMVELQFNTKIKSVQS 218
Query: 340 DWG 332
DWG
Sbjct: 219 DWG 221
>gb|KYP67572.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 349
Score = 134 bits (336), Expect(2) = 9e-44
Identities = 60/110 (54%), Positives = 76/110 (69%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GG+YR + +G+ R CP+TH Q G ERKH HIVELGL++LA A LP++FW +
Sbjct: 218 GGKYRPFTAYLNDVGIQHRLICPHTHHQNGVVERKHRHIVELGLTMLAEANLPMQFWDYA 277
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYN 6
IN LP+ S+QN+ PYQ L++ PDY FLKVFGCSCFP+LRPYN
Sbjct: 278 FPTSVYLINRLPSSSIQNEVPYQKLFNKIPDYHFLKVFGCSCFPHLRPYN 327
Score = 70.1 bits (170), Expect(2) = 9e-44
Identities = 31/63 (49%), Positives = 42/63 (66%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GP+ + S GF+YY+ FVD YTR+TWI+ LK K++ I QF V+ QF IK+ Q+
Sbjct: 156 GPASVTSTCGFQYYITFVDAYTRFTWIYLLKNKAQTIGIFKQFHNMVKNQFQLPIKALQT 215
Query: 340 DWG 332
DWG
Sbjct: 216 DWG 218
>gb|KYP67563.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 349
Score = 134 bits (336), Expect(2) = 9e-44
Identities = 60/110 (54%), Positives = 76/110 (69%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GG+YR + +G+ R CP+TH Q G ERKH HIVELGL++LA A LP++FW +
Sbjct: 218 GGKYRPFTAYLNDVGIQHRLICPHTHHQNGVVERKHRHIVELGLTMLAEANLPMQFWDYA 277
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYN 6
IN LP+ S+QN+ PYQ L++ PDY FLKVFGCSCFP+LRPYN
Sbjct: 278 FPTSVYLINRLPSSSIQNEVPYQKLFNKIPDYHFLKVFGCSCFPHLRPYN 327
Score = 70.1 bits (170), Expect(2) = 9e-44
Identities = 31/63 (49%), Positives = 42/63 (66%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GP+ + S GF+YY+ FVD YTR+TWI+ LK K++ I QF V+ QF IK+ Q+
Sbjct: 156 GPASVTSTCGFQYYITFVDAYTRFTWIYLLKNKAQTIGIFQQFHNMVKNQFQLPIKALQT 215
Query: 340 DWG 332
DWG
Sbjct: 216 DWG 218
>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1268
Score = 125 bits (313), Expect(2) = 2e-43
Identities = 57/109 (52%), Positives = 70/109 (64%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGEYRS F G+ R CP+TH Q G ERKH HIV++G++LL HA+LPL FW +
Sbjct: 547 GGEYRSFTAFLATHGITHRLICPHTHHQNGVVERKHRHIVDIGITLLHHASLPLTFWDYA 606
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPY 9
IN LPT SL P+ +L+ PDY FLK FGC+CFP+LRPY
Sbjct: 607 FSTAVYLINRLPTASLNFDIPFTVLFKQTPDYKFLKTFGCACFPFLRPY 655
Score = 78.2 bits (191), Expect(2) = 2e-43
Identities = 34/63 (53%), Positives = 44/63 (69%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GPSH+ S G+ YYV F+D ++++TWI+PLK KS+ S+ QF VE Q KIKS QS
Sbjct: 485 GPSHVVSHSGYVYYVSFIDAFSKFTWIYPLKSKSDTLSVFQQFKAMVELQLNTKIKSIQS 544
Query: 340 DWG 332
DWG
Sbjct: 545 DWG 547
>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 785
Score = 134 bits (338), Expect(2) = 3e-43
Identities = 59/110 (53%), Positives = 76/110 (69%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGE+RS + + G+ R CP+TH Q G ERKH HIVELGL++LA A LP++FW H
Sbjct: 532 GGEFRSFTSYLAQNGIQHRLICPHTHHQNGVVERKHRHIVELGLTMLAQAHLPMQFWDHA 591
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYN 6
IN LP+ S+QN P++ L+H PDY FL++FGCSCFP+LRPYN
Sbjct: 592 FLTSVYLINRLPSSSIQNDVPFRKLFHQLPDYNFLRIFGCSCFPHLRPYN 641
Score = 67.8 bits (164), Expect(2) = 3e-43
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GP+ I S +G++YYV FVD +TR+TWIF LK K+ + QF ++ QF IK+ Q+
Sbjct: 470 GPAPITSDNGYQYYVTFVDAHTRFTWIFLLKRKAHTLDVFKQFHAMIQNQFQLPIKAIQT 529
Query: 340 DWG 332
DWG
Sbjct: 530 DWG 532
>gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1085
Score = 132 bits (333), Expect(2) = 6e-43
Identities = 60/110 (54%), Positives = 74/110 (67%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGEYRS + ++G+ R C +TH Q G ERKH HIVELGL+LLA A LP++FW H
Sbjct: 500 GGEYRSFTNYLNEVGIQHRLICRHTHHQNGVVERKHRHIVELGLTLLAQAELPMQFWDHA 559
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYN 6
IN LP+ S+QN PY L+H PDY L++FGCSCFP+LRPYN
Sbjct: 560 FLTGVYLINRLPSSSIQNVVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYN 609
Score = 68.6 bits (166), Expect(2) = 6e-43
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GP+ + S G++YYV FVD +TR+TWI+ LK K++ F++ QF V Q+ IK+ Q+
Sbjct: 438 GPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKNKAQTFNVFKQFHAMVNNQYHHPIKALQT 497
Query: 340 DWG 332
DWG
Sbjct: 498 DWG 500
>gb|KYP68414.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 603
Score = 132 bits (333), Expect(2) = 6e-43
Identities = 60/110 (54%), Positives = 74/110 (67%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGEYRS + ++G+ R C +TH Q G ERKH HIVELGL+LLA A LP++FW H
Sbjct: 293 GGEYRSFTNYLNEVGIQHRLICRHTHHQNGVVERKHRHIVELGLTLLAQAELPMQFWDHA 352
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYN 6
IN LP+ S+QN PY L+H PDY L++FGCSCFP+LRPYN
Sbjct: 353 FLTGVYLINRLPSSSIQNVVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYN 402
Score = 68.6 bits (166), Expect(2) = 6e-43
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GP+ + S G++YYV FVD +TR+TWI+ LK K++ F++ QF V Q+ IK+ Q+
Sbjct: 231 GPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKNKAQTFNVFKQFHAMVNNQYHHPIKALQT 290
Query: 340 DWG 332
DWG
Sbjct: 291 DWG 293
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 135 bits (339), Expect(2) = 3e-42
Identities = 61/110 (55%), Positives = 77/110 (70%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGEY L FFTK+G++ CP+THQQ G AERKH HIVE+GLSLLAHA++PLKFW
Sbjct: 576 GGEYEKLHDFFTKIGISHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEA 635
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYN 6
IN P+ +Q ++P + L+H P YT L+VFGC+C+P LRPYN
Sbjct: 636 FIAATYLINRTPSKVIQYETPLEHLFHQKPSYTSLRVFGCACWPNLRPYN 685
Score = 63.9 bits (154), Expect(2) = 3e-42
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -3
Query: 502 SLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQSDWG 332
S+ G KYYV F+DD++++TWI+ LK KSEVF +F VER F +KI + Q+DWG
Sbjct: 520 SVGGRKYYVSFIDDFSKFTWIYLLKQKSEVFHKFHEFQQLVERIFYRKIIAMQTDWG 576
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 133 bits (335), Expect(2) = 6e-42
Identities = 57/110 (51%), Positives = 80/110 (72%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGEY+ L FF K+G++ CP+THQQ G AERKH HI+E+GLSLL++A++PLKFW
Sbjct: 585 GGEYQKLNSFFAKIGIDHHVSCPHTHQQNGSAERKHRHIIEVGLSLLSYASMPLKFWDEA 644
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYN 6
IN +P+ ++QN +P + L++ PDY L+VFGC+C+P+LRPYN
Sbjct: 645 FVAATYLINRVPSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWPHLRPYN 694
Score = 64.3 bits (155), Expect(2) = 6e-42
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = -3
Query: 487 KYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQSDWG 332
KYYV F+DD++++TWI+ LK KSEVF +F VER F +KI + Q+DWG
Sbjct: 534 KYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWG 585
>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1408
Score = 145 bits (365), Expect(2) = 8e-42
Identities = 65/110 (59%), Positives = 80/110 (72%)
Frame = -2
Query: 335 GGEYRSLVPFFTKLGVNFRHPCPYTHQQQGKAERKHLHIVELGLSLLAHATLPLKFWWHX 156
GGE+R+L+ FF + G+ R CPYTH Q G ER+H HIVELGL++L H+TLPL FW H
Sbjct: 630 GGEFRALISFFQQEGILHRLTCPYTHHQNGTVERRHRHIVELGLAMLHHSTLPLNFWDHA 689
Query: 155 XXXXXXTINLLPTPSLQNKSPYQLLYHTHPDYTFLKVFGCSCFPYLRPYN 6
IN LP+ S+ +SPY+L++H PDYTFLKVFGCSCFP LRPYN
Sbjct: 690 FLTATYLINRLPSSSVGFQSPYKLIHHKDPDYTFLKVFGCSCFPLLRPYN 739
Score = 52.4 bits (124), Expect(2) = 8e-42
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = -3
Query: 520 GPSHIPSLDGFKYYVHFVDDYTRYTWIFPLK*KSEVFSIVVQFFTYVERQFGQKIKSFQS 341
GP+ + S G+ Y++ VD T+Y WI+ L+ KS+VFS F E+QF +KS Q+
Sbjct: 568 GPASLESSCGYLYFLTCVDACTKYVWIYLLRRKSDVFSNFQNFKALAEKQFQLPLKSVQT 627
Query: 340 DWG 332
D G
Sbjct: 628 DGG 630