BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00042608
         (591 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011069427.1| PREDICTED: replication factor C subunit 3 [S...   111   5e-26
ref|XP_011027494.1| PREDICTED: replication factor C subunit 3 [P...   100   7e-22
ref|XP_012844118.1| PREDICTED: replication factor C subunit 5 [E...   100   1e-21
gb|KDO80573.1| hypothetical protein CISIN_1g0178841mg, partial [...    97   2e-21
ref|XP_002302226.1| replication factor C 36 kDA family protein [...    98   5e-21
ref|XP_006434235.1| hypothetical protein CICLE_v10001597mg [Citr...    97   8e-21
ref|XP_006434236.1| hypothetical protein CICLE_v10001597mg [Citr...    97   9e-21
ref|XP_006472809.1| PREDICTED: replication factor C subunit 3 [C...    97   2e-20
ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citr...    97   2e-20
ref|XP_007223184.1| hypothetical protein PRUPE_ppa009195mg [Prun...    95   3e-20
ref|XP_008466735.1| PREDICTED: replication factor C subunit 5 [C...    95   6e-20
ref|XP_004149801.1| PREDICTED: replication factor C subunit 3 [C...    94   1e-19
ref|XP_008219611.1| PREDICTED: replication factor C subunit 3 [P...    94   1e-19
ref|XP_009801157.1| PREDICTED: replication factor C subunit 3 [N...    93   3e-19
ref|XP_009629771.1| PREDICTED: replication factor C subunit 3 [N...    93   3e-19
ref|XP_008378444.1| PREDICTED: replication factor C subunit 3-li...    92   6e-19
ref|XP_011458804.1| PREDICTED: replication factor C subunit 3 [F...    91   3e-18
ref|XP_009379030.1| PREDICTED: replication factor C subunit 3-li...    90   6e-18
ref|XP_002285868.1| PREDICTED: replication factor C subunit 3 [V...    89   8e-18
ref|XP_012078293.1| PREDICTED: replication factor C subunit 5 [J...    89   9e-18

>ref|XP_011069427.1| PREDICTED: replication factor C subunit 3 [Sesamum indicum]
          Length = 366

 Score =  111 bits (278), Expect = 5e-26
 Identities = 59/69 (85%), Positives = 62/69 (89%), Gaps = 3/69 (4%)
 Frame = +2

Query: 392 MAEVISLMDIDDDNDN--SQSLKPD-KGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAH 562
           MAEV+SLMDIDDDNDN  S SLK + KGKNVVVSAAPPD+KATPWVEKYRP SL DVAAH
Sbjct: 1   MAEVVSLMDIDDDNDNDNSHSLKLNSKGKNVVVSAAPPDSKATPWVEKYRPHSLADVAAH 60

Query: 563 RDIVETIDR 589
           RDIVETIDR
Sbjct: 61  RDIVETIDR 69


>ref|XP_011027494.1| PREDICTED: replication factor C subunit 3 [Populus euphratica]
          Length = 363

 Score =  100 bits (249), Expect = 7e-22
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = +2

Query: 392 MAEVISLMDIDDDNDNSQSLKPDKGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAHRDI 571
           MAE I+LMDID++ + +   KP+KGKNVVV A PP  KATPWVEKYRPQSL DVAAHRDI
Sbjct: 1   MAEAIALMDIDEEENQNHLSKPNKGKNVVVPATPPGGKATPWVEKYRPQSLADVAAHRDI 60

Query: 572 VETIDR 589
           ++TIDR
Sbjct: 61  IDTIDR 66


>ref|XP_012844118.1| PREDICTED: replication factor C subunit 5 [Erythranthe guttata]
           gi|604321129|gb|EYU31769.1| hypothetical protein
           MIMGU_mgv1a008738mg [Erythranthe guttata]
          Length = 364

 Score = 99.8 bits (247), Expect = 1e-21
 Identities = 51/67 (76%), Positives = 59/67 (88%), Gaps = 1/67 (1%)
 Frame = +2

Query: 392 MAEVISLMDIDDDNDNSQS-LKPDKGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAHRD 568
           MAEVISLMDID ++++S S  + +KGKNVVVSA PP +KAT WVEKYRPQSLDDVAAHRD
Sbjct: 1   MAEVISLMDIDGEDESSHSPQRNNKGKNVVVSAPPPHSKATLWVEKYRPQSLDDVAAHRD 60

Query: 569 IVETIDR 589
           IVETID+
Sbjct: 61  IVETIDK 67


>gb|KDO80573.1| hypothetical protein CISIN_1g0178841mg, partial [Citrus sinensis]
           gi|641861887|gb|KDO80574.1| hypothetical protein
           CISIN_1g0178841mg, partial [Citrus sinensis]
           gi|641861888|gb|KDO80575.1| hypothetical protein
           CISIN_1g0178841mg, partial [Citrus sinensis]
           gi|641861889|gb|KDO80576.1| hypothetical protein
           CISIN_1g0178841mg, partial [Citrus sinensis]
          Length = 217

 Score = 96.7 bits (239), Expect = 2e-21
 Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
 Frame = +2

Query: 395 AEVISLMDIDDDNDNSQSLKP-DKGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAHRDI 571
           AE +SLMD D+D +  Q+LKP D GKNV+VS  PPD KA+PWVEKYRPQSL DVAAHRDI
Sbjct: 4   AETVSLMDFDEDEN--QNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDI 61

Query: 572 VETIDR 589
           V+TIDR
Sbjct: 62  VDTIDR 67


>ref|XP_002302226.1| replication factor C 36 kDA family protein [Populus trichocarpa]
           gi|222843952|gb|EEE81499.1| replication factor C 36 kDA
           family protein [Populus trichocarpa]
          Length = 363

 Score = 98.2 bits (243), Expect = 5e-21
 Identities = 46/66 (69%), Positives = 54/66 (81%)
 Frame = +2

Query: 392 MAEVISLMDIDDDNDNSQSLKPDKGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAHRDI 571
           MAE I+LMDID++ + +   KP+KGK VVV A PP  KATPWVEKYRPQSL DVAAHRDI
Sbjct: 1   MAEAIALMDIDEEENQNHLSKPNKGKKVVVPATPPGGKATPWVEKYRPQSLADVAAHRDI 60

Query: 572 VETIDR 589
           ++TIDR
Sbjct: 61  IDTIDR 66


>ref|XP_006434235.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
           gi|567883359|ref|XP_006434238.1| hypothetical protein
           CICLE_v10001597mg [Citrus clementina]
           gi|557536357|gb|ESR47475.1| hypothetical protein
           CICLE_v10001597mg [Citrus clementina]
           gi|557536360|gb|ESR47478.1| hypothetical protein
           CICLE_v10001597mg [Citrus clementina]
          Length = 305

 Score = 96.7 bits (239), Expect = 8e-21
 Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
 Frame = +2

Query: 395 AEVISLMDIDDDNDNSQSLKP-DKGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAHRDI 571
           AE +SLMD D+D +  Q+LKP D GKNV+VS  PPD KA+PWVEKYRPQSL DVAAHRDI
Sbjct: 4   AETVSLMDFDEDEN--QNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDI 61

Query: 572 VETIDR 589
           V+TIDR
Sbjct: 62  VDTIDR 67


>ref|XP_006434236.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
           gi|557536358|gb|ESR47476.1| hypothetical protein
           CICLE_v10001597mg [Citrus clementina]
          Length = 309

 Score = 96.7 bits (239), Expect = 9e-21
 Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
 Frame = +2

Query: 395 AEVISLMDIDDDNDNSQSLKP-DKGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAHRDI 571
           AE +SLMD D+D +  Q+LKP D GKNV+VS  PPD KA+PWVEKYRPQSL DVAAHRDI
Sbjct: 4   AETVSLMDFDEDEN--QNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDI 61

Query: 572 VETIDR 589
           V+TIDR
Sbjct: 62  VDTIDR 67


>ref|XP_006472809.1| PREDICTED: replication factor C subunit 3 [Citrus sinensis]
          Length = 364

 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = +2

Query: 395 AEVISLMDIDDDNDNSQSLKP-DKGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAHRDI 571
           AE +SLMDID+D +  ++LKP D GKNV+VS  PPD KA+PWVEKYRPQSL DVAAHRDI
Sbjct: 4   AETVSLMDIDEDEN--KNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDI 61

Query: 572 VETIDR 589
           V+TIDR
Sbjct: 62  VDTIDR 67


>ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
           gi|557536359|gb|ESR47477.1| hypothetical protein
           CICLE_v10001597mg [Citrus clementina]
          Length = 364

 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
 Frame = +2

Query: 395 AEVISLMDIDDDNDNSQSLKP-DKGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAHRDI 571
           AE +SLMD D+D +  Q+LKP D GKNV+VS  PPD KA+PWVEKYRPQSL DVAAHRDI
Sbjct: 4   AETVSLMDFDEDEN--QNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDI 61

Query: 572 VETIDR 589
           V+TIDR
Sbjct: 62  VDTIDR 67


>ref|XP_007223184.1| hypothetical protein PRUPE_ppa009195mg [Prunus persica]
           gi|462420120|gb|EMJ24383.1| hypothetical protein
           PRUPE_ppa009195mg [Prunus persica]
          Length = 302

 Score = 95.1 bits (235), Expect = 3e-20
 Identities = 51/70 (72%), Positives = 57/70 (81%), Gaps = 4/70 (5%)
 Frame = +2

Query: 392 MAEVISLMDIDDDNDNSQSLKPDK----GKNVVVSAAPPDTKATPWVEKYRPQSLDDVAA 559
           MAEVI++MDIDDDN+ S   KP+     GKNVVV+AAP   KATPWVEKYRPQSL DVAA
Sbjct: 1   MAEVITVMDIDDDNNPSP--KPNNNNNMGKNVVVAAAPSQGKATPWVEKYRPQSLADVAA 58

Query: 560 HRDIVETIDR 589
           HRDIV+TIDR
Sbjct: 59  HRDIVDTIDR 68


>ref|XP_008466735.1| PREDICTED: replication factor C subunit 5 [Cucumis melo]
          Length = 363

 Score = 95.1 bits (235), Expect = 6e-20
 Identities = 45/66 (68%), Positives = 55/66 (83%)
 Frame = +2

Query: 392 MAEVISLMDIDDDNDNSQSLKPDKGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAHRDI 571
           M+EVIS+MDIDDDN N+++ K  KGKNV   AA P+ KA PWVEK+RP+SL DVAAHRDI
Sbjct: 1   MSEVISVMDIDDDNGNNEAEKAVKGKNVASPAAAPEVKAIPWVEKFRPKSLADVAAHRDI 60

Query: 572 VETIDR 589
           V+TID+
Sbjct: 61  VDTIDK 66


>ref|XP_004149801.1| PREDICTED: replication factor C subunit 3 [Cucumis sativus]
           gi|700192504|gb|KGN47708.1| hypothetical protein
           Csa_6G382960 [Cucumis sativus]
          Length = 363

 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 45/66 (68%), Positives = 55/66 (83%)
 Frame = +2

Query: 392 MAEVISLMDIDDDNDNSQSLKPDKGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAHRDI 571
           M+EVIS+MDIDDDN N+++ K  KGKNV   AA P+ KA PWVEK+RP+SL DVAAHRDI
Sbjct: 1   MSEVISVMDIDDDNGNNEAEKAVKGKNVASPAAAPEGKAIPWVEKFRPKSLADVAAHRDI 60

Query: 572 VETIDR 589
           V+TID+
Sbjct: 61  VDTIDK 66


>ref|XP_008219611.1| PREDICTED: replication factor C subunit 3 [Prunus mume]
          Length = 368

 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 51/69 (73%), Positives = 57/69 (82%), Gaps = 3/69 (4%)
 Frame = +2

Query: 392 MAEVISLMDIDDDNDNSQSLKPD---KGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAH 562
           MAEVI++MDIDDDN+ S   KP+   KG NVVV+AAP   KATPWVEKYRPQSL DVAAH
Sbjct: 1   MAEVITVMDIDDDNNPSP--KPNNNNKGINVVVAAAPSQGKATPWVEKYRPQSLADVAAH 58

Query: 563 RDIVETIDR 589
           RDIV+TIDR
Sbjct: 59  RDIVDTIDR 67


>ref|XP_009801157.1| PREDICTED: replication factor C subunit 3 [Nicotiana sylvestris]
          Length = 360

 Score = 93.2 bits (230), Expect = 3e-19
 Identities = 46/66 (69%), Positives = 54/66 (81%)
 Frame = +2

Query: 392 MAEVISLMDIDDDNDNSQSLKPDKGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAHRDI 571
           MAE ISLMDIDDD  ++   KP+KGKN++ S++  D KA PWVEK+RPQSL DVAAHRDI
Sbjct: 1   MAEPISLMDIDDDKIDT---KPNKGKNIIFSSSTADPKAVPWVEKFRPQSLSDVAAHRDI 57

Query: 572 VETIDR 589
           VETIDR
Sbjct: 58  VETIDR 63


>ref|XP_009629771.1| PREDICTED: replication factor C subunit 3 [Nicotiana
           tomentosiformis]
          Length = 360

 Score = 93.2 bits (230), Expect = 3e-19
 Identities = 46/66 (69%), Positives = 54/66 (81%)
 Frame = +2

Query: 392 MAEVISLMDIDDDNDNSQSLKPDKGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAHRDI 571
           MAE ISLMDIDDD  ++   KP+KGKN++ S++  D KA PWVEK+RPQSL DVAAHRDI
Sbjct: 1   MAEPISLMDIDDDKIDT---KPNKGKNIIFSSSTADPKAVPWVEKFRPQSLSDVAAHRDI 57

Query: 572 VETIDR 589
           VETIDR
Sbjct: 58  VETIDR 63


>ref|XP_008378444.1| PREDICTED: replication factor C subunit 3-like [Malus domestica]
          Length = 366

 Score = 92.4 bits (228), Expect = 6e-19
 Identities = 51/67 (76%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
 Frame = +2

Query: 392 MAEVISLMDIDDDNDNSQSLKPDKGKNVVVSAAPPDT-KATPWVEKYRPQSLDDVAAHRD 568
           MAE I+LMDIDDD DN      +KGKNVVVSAA P   KATPWVEKYRPQSL DVAAHRD
Sbjct: 1   MAEPITLMDIDDD-DNPSVQPNNKGKNVVVSAAAPSHGKATPWVEKYRPQSLADVAAHRD 59

Query: 569 IVETIDR 589
           IV+TIDR
Sbjct: 60  IVDTIDR 66


>ref|XP_011458804.1| PREDICTED: replication factor C subunit 3 [Fragaria vesca subsp.
           vesca]
          Length = 366

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
 Frame = +2

Query: 392 MAEVISLMDIDDDNDNSQSLKP--DKGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAHR 565
           MAE+I+ MDID D+ N  SLKP  DKGKNV VS  P   +ATPWVEKYRPQSL DVAAHR
Sbjct: 1   MAELITPMDIDGDDTNPSSLKPNNDKGKNVAVSG-PIHGEATPWVEKYRPQSLADVAAHR 59

Query: 566 DIVETIDR 589
           DIV+TIDR
Sbjct: 60  DIVDTIDR 67


>ref|XP_009379030.1| PREDICTED: replication factor C subunit 3-like [Pyrus x
           bretschneideri] gi|694408745|ref|XP_009379036.1|
           PREDICTED: replication factor C subunit 3-like [Pyrus x
           bretschneideri]
          Length = 366

 Score = 89.7 bits (221), Expect = 6e-18
 Identities = 50/67 (74%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
 Frame = +2

Query: 392 MAEVISLMDIDDDNDNSQSLKPDKGKNVVVS-AAPPDTKATPWVEKYRPQSLDDVAAHRD 568
           MAE I+LMDIDDD DN      +KGKNVVVS AAP   KATPWVEKYRP SL DVAAHRD
Sbjct: 1   MAEPITLMDIDDD-DNLSVQPNNKGKNVVVSVAAPSHGKATPWVEKYRPHSLADVAAHRD 59

Query: 569 IVETIDR 589
           IV+TIDR
Sbjct: 60  IVDTIDR 66


>ref|XP_002285868.1| PREDICTED: replication factor C subunit 3 [Vitis vinifera]
           gi|302141794|emb|CBI18997.3| unnamed protein product
           [Vitis vinifera]
          Length = 360

 Score = 89.4 bits (220), Expect = 8e-18
 Identities = 45/66 (68%), Positives = 56/66 (84%)
 Frame = +2

Query: 392 MAEVISLMDIDDDNDNSQSLKPDKGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAAHRDI 571
           MAE +++MDID+++++   LK +KGK+VVV   PPD KATPWVEKYRPQSL DVAAHRDI
Sbjct: 1   MAEAVTVMDIDEEDNHL--LKANKGKSVVVGG-PPDRKATPWVEKYRPQSLADVAAHRDI 57

Query: 572 VETIDR 589
           V+TIDR
Sbjct: 58  VDTIDR 63


>ref|XP_012078293.1| PREDICTED: replication factor C subunit 5 [Jatropha curcas]
           gi|643723235|gb|KDP32840.1| hypothetical protein
           JCGZ_12132 [Jatropha curcas]
          Length = 367

 Score = 89.4 bits (220), Expect = 9e-18
 Identities = 46/70 (65%), Positives = 51/70 (72%), Gaps = 4/70 (5%)
 Frame = +2

Query: 392 MAEVISLMDIDDDNDNSQ----SLKPDKGKNVVVSAAPPDTKATPWVEKYRPQSLDDVAA 559
           M E  S MDID D +  Q    S + +KGKNVVV+  PPD KA PWVEKYRPQSL DVAA
Sbjct: 1   MNEKESFMDIDGDENEDQKQNDSYETNKGKNVVVAGTPPDIKAVPWVEKYRPQSLADVAA 60

Query: 560 HRDIVETIDR 589
           HRDIV+TIDR
Sbjct: 61  HRDIVDTIDR 70