BLASTX nr result

ID: Rehmannia27_contig00042567 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00042567
         (373 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KOM34408.1| hypothetical protein LR48_Vigan02g055800 [Vigna a...    69   3e-11
ref|NP_671805.1| uncharacterized protein [Arabidopsis thaliana] ...    54   1e-06
emb|CDY45521.1| BnaCnng12800D [Brassica napus]                         54   3e-06

>gb|KOM34408.1| hypothetical protein LR48_Vigan02g055800 [Vigna angularis]
          Length = 382

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 33/41 (80%), Positives = 35/41 (85%)
 Frame = +1

Query: 235 TVGQQSLHLFTNYDGSPGPLSSSLFCSLVGVRTPTKGEGVD 357
           TVGQ+SLHL T+YDGSPGPLSSSLFCSLV    P KGEGVD
Sbjct: 342 TVGQRSLHLLTHYDGSPGPLSSSLFCSLVRGPDPHKGEGVD 382


>ref|NP_671805.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330250982|gb|AEC06076.1| uncharacterized protein
           AT2G07772 [Arabidopsis thaliana]
          Length = 179

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 29/44 (65%), Positives = 32/44 (72%)
 Frame = +3

Query: 84  ELSLRLKRCGLIVGDFRRVTPTFFQFLDNRSRIMLAAGAGVTLA 215
           ++SLRLKRCG     FRRVTPTF +FLDNRSRIM AAG     A
Sbjct: 108 DISLRLKRCG-----FRRVTPTFCKFLDNRSRIMPAAGTNPIFA 146


>emb|CDY45521.1| BnaCnng12800D [Brassica napus]
          Length = 522

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 29/44 (65%), Positives = 32/44 (72%)
 Frame = +3

Query: 84  ELSLRLKRCGLIVGDFRRVTPTFFQFLDNRSRIMLAAGAGVTLA 215
           ++SLRLKRCG     FRRVTPTF +FLDNRSRIM AAG     A
Sbjct: 451 DISLRLKRCG-----FRRVTPTFCKFLDNRSRIMPAAGTNPIFA 489


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