BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00041661
         (531 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP45519.1| Copia protein [Cajanus cajan]                          179   4e-54
gb|KYP78622.1| Copia protein [Cajanus cajan]                          179   7e-54
gb|KYP40616.1| Retrovirus-related Pol polyprotein from transposo...   177   1e-53
gb|KYP34010.1| Retrovirus-related Pol polyprotein from transposo...   177   2e-53
ref|XP_011656225.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r...   189   4e-53
gb|KYP31884.1| Copia protein [Cajanus cajan]                          177   1e-52
emb|CAD39835.2| OSJNBb0072N21.1 [Oryza sativa Japonica Group]         179   1e-51
gb|KYP45506.1| Copia protein [Cajanus cajan]                          179   3e-51
ref|XP_007022430.1| Uncharacterized protein TCM_032871 [Theobrom...   175   5e-51
gb|KYP57245.1| Copia protein, partial [Cajanus cajan]                 180   1e-50
gb|KYP55105.1| Copia protein [Cajanus cajan]                          177   2e-50
gb|KYP31691.1| Retrovirus-related Pol polyprotein from transposo...   177   2e-50
gb|KYP36009.1| Copia protein [Cajanus cajan]                          169   2e-50
gb|KYP32220.1| Copia protein [Cajanus cajan]                          177   3e-50
gb|KYP78284.1| Copia protein [Cajanus cajan]                          177   5e-50
gb|KYP60846.1| Copia protein [Cajanus cajan]                          171   5e-50
gb|KYP38726.1| Retrovirus-related Pol polyprotein from transposo...   180   7e-50
gb|KYP48537.1| Retrovirus-related Pol polyprotein from transposo...   168   7e-50
gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposo...   180   9e-50
gb|KYP46032.1| Copia protein, partial [Cajanus cajan]                 172   1e-49

>gb|KYP45519.1| Copia protein [Cajanus cajan]
          Length = 203

 Score =  179 bits (453), Expect = 4e-54
 Identities = 87/140 (62%), Positives = 105/140 (75%)
 Frame = -2

Query: 446 VIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYATF 267
           +IGTKWVFRNK++E G ++RNKARLVAKGY QEEGID+DETFAPVAR+EAIR+ LAY++ 
Sbjct: 27  IIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLAYSSI 86

Query: 266 KNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAPRAWYDT 87
            NF ++Q DVKSAFLN                     + VYKLKK LYGLKQAPR+WYD 
Sbjct: 87  MNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNPNHVYKLKKALYGLKQAPRSWYDR 146

Query: 86  LSQFLIDNGFTKGKVDRTLF 27
           LS+FLI+N + +GKVD TLF
Sbjct: 147 LSKFLIENDYVRGKVDNTLF 166


>gb|KYP78622.1| Copia protein [Cajanus cajan]
          Length = 222

 Score =  179 bits (453), Expect = 7e-54
 Identities = 87/140 (62%), Positives = 105/140 (75%)
 Frame = -2

Query: 446 VIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYATF 267
           +IGTKWVFRNK++E G ++RNKARLVAKGY QEEGID+DETFAPVAR+EAIR+ LAY++ 
Sbjct: 27  IIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLAYSSI 86

Query: 266 KNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAPRAWYDT 87
            NF ++Q DVKSAFLN                     + VYKLKK LYGLKQAPR+WYD 
Sbjct: 87  MNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNPNHVYKLKKALYGLKQAPRSWYDR 146

Query: 86  LSQFLIDNGFTKGKVDRTLF 27
           LS+FLI+N + +GKVD TLF
Sbjct: 147 LSKFLIENDYVRGKVDNTLF 166


>gb|KYP40616.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 197

 Score =  177 bits (450), Expect = 1e-53
 Identities = 87/140 (62%), Positives = 103/140 (73%)
 Frame = -2

Query: 446 VIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYATF 267
           +IGTKWVFRNK++E G ++RNKARLVAKGY QEEGID+DETFAPVAR+EAIR+ LAYA+ 
Sbjct: 27  IIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLAYASI 86

Query: 266 KNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAPRAWYDT 87
            NF ++Q DVKSAFLN                     + VYKLKK LYGLKQAPR+WYD 
Sbjct: 87  MNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKYPNHVYKLKKALYGLKQAPRSWYDR 146

Query: 86  LSQFLIDNGFTKGKVDRTLF 27
           LS+FL  N + +GKVD TLF
Sbjct: 147 LSKFLTKNDYVRGKVDNTLF 166


>gb|KYP34010.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 216

 Score =  177 bits (449), Expect = 2e-53
 Identities = 86/140 (61%), Positives = 104/140 (74%)
 Frame = -2

Query: 446 VIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYATF 267
           +IGTKWVFRNK++E G ++RNKARLVAKGY QEEGID+DETFAPVAR+EAIR+ LAY++ 
Sbjct: 73  IIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLAYSSI 132

Query: 266 KNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAPRAWYDT 87
           KNF ++Q DVKS FLN                     + VYKLKK LYGLKQAPR+WYD 
Sbjct: 133 KNFKLYQMDVKSVFLNGLIQEEVYVEQPPGIVDFKNPNHVYKLKKALYGLKQAPRSWYDR 192

Query: 86  LSQFLIDNGFTKGKVDRTLF 27
           LS+F I+N + +GKVD TLF
Sbjct: 193 LSKFFIENDYVRGKVDNTLF 212


>ref|XP_011656225.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
           from transposon TNT 1-94 [Cucumis sativus]
          Length = 794

 Score =  189 bits (480), Expect = 4e-53
 Identities = 92/146 (63%), Positives = 114/146 (78%)
 Frame = -2

Query: 464 KASHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMF 285
           + S+ ++IGTKWVFRNKM+E G+++RNKARLVA+GYCQEEGID++ETFAPVARLEAIRM 
Sbjct: 475 RPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRML 534

Query: 284 LAYATFKNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAP 105
           LA+A++KNF ++Q DVKS FLN               E   + + VYKLKK LYGLKQAP
Sbjct: 535 LAFASYKNFILYQMDVKSDFLNGYIVEKFYVEQPXAFESFDLPNHVYKLKKALYGLKQAP 594

Query: 104 RAWYDTLSQFLIDNGFTKGKVDRTLF 27
           RAWYD LS+FL++N F  GK+D TLF
Sbjct: 595 RAWYDRLSKFLLENDFKMGKIDNTLF 620


>gb|KYP31884.1| Copia protein [Cajanus cajan]
          Length = 257

 Score =  177 bits (448), Expect = 1e-52
 Identities = 86/140 (61%), Positives = 104/140 (74%)
 Frame = -2

Query: 446 VIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYATF 267
           +IGTKWVFRNK++E G ++RNKARLVAKGY QEEGID+DETFAPVAR+EAIR+ LAY++ 
Sbjct: 49  IIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLAYSSI 108

Query: 266 KNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAPRAWYDT 87
            NF ++Q DVKSAFLN                     + VYKLKK LYGLKQAPR+WYD 
Sbjct: 109 MNFKLYQMDVKSAFLNGLIQEELYVEQPPGFVDFKNPNHVYKLKKALYGLKQAPRSWYDR 168

Query: 86  LSQFLIDNGFTKGKVDRTLF 27
           L +FLI+N + +GKVD TLF
Sbjct: 169 LRKFLIENDYVRGKVDNTLF 188


>emb|CAD39835.2| OSJNBb0072N21.1 [Oryza sativa Japonica Group]
          Length = 420

 Score =  179 bits (454), Expect = 1e-51
 Identities = 89/151 (58%), Positives = 109/151 (72%)
 Frame = -2

Query: 458 SHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLA 279
           S QN+IGTKWVF+NK NE+G +VRNKARLVA+G+ Q EG+DFDETFA VAR+EAIR+ LA
Sbjct: 21  SGQNIIGTKWVFKNKQNEDGLIVRNKARLVAQGFTQVEGLDFDETFAHVARIEAIRLLLA 80

Query: 278 YATFKNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAPRA 99
           +A  K F ++Q DVKSAFLN               E     + V+KL KTLYGLKQAPRA
Sbjct: 81  FAASKGFKLYQMDVKSAFLNGFIQEEVYVKQLPGFENSDFPNHVFKLSKTLYGLKQAPRA 140

Query: 98  WYDTLSQFLIDNGFTKGKVDRTLFRIQDGES 6
           WYD L  FL+  GFT GKVD+TLF ++ G++
Sbjct: 141 WYDRLKNFLLAKGFTMGKVDKTLFILKHGDN 171


>gb|KYP45506.1| Copia protein [Cajanus cajan]
          Length = 496

 Score =  179 bits (455), Expect = 3e-51
 Identities = 87/140 (62%), Positives = 105/140 (75%)
 Frame = -2

Query: 446 VIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYATF 267
           +IGTKWVFRNK++E G ++RNKARLVAKGY QEEGID+DETFAPVAR+EAIR+ LAY++ 
Sbjct: 27  IIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLAYSSI 86

Query: 266 KNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAPRAWYDT 87
            NF ++Q DVKSAFLN                     + VYKLKK LYGLKQAPR+WYD 
Sbjct: 87  MNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKYPNHVYKLKKALYGLKQAPRSWYDR 146

Query: 86  LSQFLIDNGFTKGKVDRTLF 27
           LS+FLI+N + +GKVD TLF
Sbjct: 147 LSKFLIENDYVRGKVDNTLF 166


>ref|XP_007022430.1| Uncharacterized protein TCM_032871 [Theobroma cacao]
           gi|508722058|gb|EOY13955.1| Uncharacterized protein
           TCM_032871 [Theobroma cacao]
          Length = 332

 Score =  175 bits (443), Expect = 5e-51
 Identities = 87/146 (59%), Positives = 108/146 (73%)
 Frame = -2

Query: 464 KASHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMF 285
           + S+  +IGTKW+FRNK++E+G+VVRNKARLVAKGY QEEGID+DETFAPVAR+EAIR+ 
Sbjct: 21  RPSNHLIIGTKWLFRNKVDEQGNVVRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLL 80

Query: 284 LAYATFKNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAP 105
           LA+A F NF ++Q DVK A LN               E     D V+KL K LYGLKQAP
Sbjct: 81  LAFARFMNFKLYQMDVKCALLNGLIQEELFVQQPPSFEDFEKFDHVFKLHKALYGLKQAP 140

Query: 104 RAWYDTLSQFLIDNGFTKGKVDRTLF 27
           RAWY+ LS+FLI+NG+ +G +D TLF
Sbjct: 141 RAWYERLSKFLIENGYDRGSIDTTLF 166


>gb|KYP57245.1| Copia protein, partial [Cajanus cajan]
          Length = 605

 Score =  180 bits (456), Expect = 1e-50
 Identities = 92/158 (58%), Positives = 114/158 (72%), Gaps = 3/158 (1%)
 Frame = -2

Query: 491 KGISLGIGSKASHQN---VIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETF 321
           KG S+   S+ +  N   +IGTKW+FRNK++E+G VV+NKARLVAKGY QEEGID++ET+
Sbjct: 392 KGFSVSFDSQKNRPNNHTIIGTKWIFRNKLDEQGIVVKNKARLVAKGYNQEEGIDYEETY 451

Query: 320 APVARLEAIRMFLAYATFKNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYK 141
           APVARLEAIRM LAYA+  +F ++Q DVKSAFLN               E     + V+K
Sbjct: 452 APVARLEAIRMLLAYASIMDFKLYQMDVKSAFLNGFIQEEVYVEQPPGFENSEFPNHVFK 511

Query: 140 LKKTLYGLKQAPRAWYDTLSQFLIDNGFTKGKVDRTLF 27
           LKK LYGLKQAPRAWY+ LS+FL+   FT+GKVD TLF
Sbjct: 512 LKKVLYGLKQAPRAWYERLSKFLLKKEFTRGKVDTTLF 549


>gb|KYP55105.1| Copia protein [Cajanus cajan]
          Length = 495

 Score =  177 bits (450), Expect = 2e-50
 Identities = 87/147 (59%), Positives = 110/147 (74%)
 Frame = -2

Query: 467 SKASHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRM 288
           ++ ++  +IGTKW+FRNK++E G V+RNKARLVAKGY QEEGID++ET+APVARLEAIRM
Sbjct: 18  NRPTNHPIIGTKWIFRNKLDEHGLVIRNKARLVAKGYNQEEGIDYEETYAPVARLEAIRM 77

Query: 287 FLAYATFKNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQA 108
            LAYA+  +F ++Q DVKSAFLN               E     + V+KLKK LYGLKQA
Sbjct: 78  LLAYASIMDFKLYQMDVKSAFLNGFIQEEVYVEQPPGFENSEFPNHVFKLKKALYGLKQA 137

Query: 107 PRAWYDTLSQFLIDNGFTKGKVDRTLF 27
           PRAWY+ LS+FL++  FT+GKVD TLF
Sbjct: 138 PRAWYERLSKFLLEKEFTRGKVDTTLF 164


>gb|KYP31691.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 462

 Score =  177 bits (448), Expect = 2e-50
 Identities = 86/140 (61%), Positives = 104/140 (74%)
 Frame = -2

Query: 446 VIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYATF 267
           +IGTKWVF NK++E G ++RNKARLVAKGY QEEGID+DETFAP+AR+EAIR+ LAY++ 
Sbjct: 49  IIGTKWVFINKLDESGIIIRNKARLVAKGYNQEEGIDYDETFAPIARIEAIRLLLAYSSI 108

Query: 266 KNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAPRAWYDT 87
           +NF ++Q DVKSAFLN                       VYKLKK LYGLKQAPR+WYD 
Sbjct: 109 RNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFIDFKYPHLVYKLKKALYGLKQAPRSWYDR 168

Query: 86  LSQFLIDNGFTKGKVDRTLF 27
           LS+FLI+N + KGKVD TLF
Sbjct: 169 LSKFLIENDYIKGKVDNTLF 188


>gb|KYP36009.1| Copia protein [Cajanus cajan]
          Length = 189

 Score =  169 bits (427), Expect = 2e-50
 Identities = 82/140 (58%), Positives = 102/140 (72%)
 Frame = -2

Query: 446 VIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYATF 267
           +IGTKWVFRNK++E G ++RNKARLVAKGY QEEGID+DETFAP+AR+EAIR+ L+Y++ 
Sbjct: 49  IIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEEGIDYDETFAPIARIEAIRLLLSYSSI 108

Query: 266 KNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAPRAWYDT 87
            NF ++Q DVKS FLN                     + VYKLKK LYGLKQ PR+ YD 
Sbjct: 109 MNFKLYQMDVKSVFLNGLIQEEVYVEKPLGFVDFKNPNHVYKLKKALYGLKQTPRSRYDR 168

Query: 86  LSQFLIDNGFTKGKVDRTLF 27
           LS+FLI+N + +GKVD TLF
Sbjct: 169 LSKFLIENDYVRGKVDNTLF 188


>gb|KYP32220.1| Copia protein [Cajanus cajan]
          Length = 518

 Score =  177 bits (450), Expect = 3e-50
 Identities = 85/140 (60%), Positives = 104/140 (74%)
 Frame = -2

Query: 446 VIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYATF 267
           +IGTKW FRNK++E G+++RNKARLVAKGY QEEGID+DETF+PVAR+EAIR+ LAYA+ 
Sbjct: 49  IIGTKWAFRNKLDESGNIIRNKARLVAKGYNQEEGIDYDETFSPVARIEAIRLLLAYASI 108

Query: 266 KNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAPRAWYDT 87
            NF ++Q DVKS FLN                     + VYKLKK LYGLKQAPR+WYD 
Sbjct: 109 MNFKLYQMDVKSVFLNGLIQEEVYVEQPPGFVDFKYPNHVYKLKKALYGLKQAPRSWYDR 168

Query: 86  LSQFLIDNGFTKGKVDRTLF 27
           LS+FLI+N + +GKVD TLF
Sbjct: 169 LSKFLIENDYVRGKVDNTLF 188


>gb|KYP78284.1| Copia protein [Cajanus cajan]
          Length = 517

 Score =  177 bits (448), Expect = 5e-50
 Identities = 86/140 (61%), Positives = 104/140 (74%)
 Frame = -2

Query: 446 VIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYATF 267
           +IGTKW FRNK++E G ++RNKARLVAKGY QEEGID+DETFAPVAR+EAIR+ LAY++ 
Sbjct: 49  IIGTKWDFRNKLDESGIIIRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLAYSSI 108

Query: 266 KNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAPRAWYDT 87
            NF ++Q DVKSAFLN                     + VYKLKK LYGLKQAPR+WYD 
Sbjct: 109 MNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKYPNHVYKLKKALYGLKQAPRSWYDR 168

Query: 86  LSQFLIDNGFTKGKVDRTLF 27
           LS+FLI+N + +GKVD TLF
Sbjct: 169 LSKFLIENDYVRGKVDNTLF 188


>gb|KYP60846.1| Copia protein [Cajanus cajan]
          Length = 302

 Score =  171 bits (434), Expect = 5e-50
 Identities = 85/140 (60%), Positives = 102/140 (72%)
 Frame = -2

Query: 446 VIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYATF 267
           +I TKWVFRNK++E   ++RNKARLVAKGY QEEGID+DETFAPVAR+EAIR+ LAYA+ 
Sbjct: 27  IIETKWVFRNKLDESRIIIRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLAYASI 86

Query: 266 KNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAPRAWYDT 87
            NF + Q DVKS+FLN                     + VYKLKK LYGLKQAPR+WYD 
Sbjct: 87  MNFKLCQMDVKSSFLNGLTKEKVYVEQPPGFIDFKYPNHVYKLKKALYGLKQAPRSWYDR 146

Query: 86  LSQFLIDNGFTKGKVDRTLF 27
           LS+FLI+N + +GKVD TLF
Sbjct: 147 LSKFLIENDYVRGKVDNTLF 166


>gb|KYP38726.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 749

 Score =  180 bits (456), Expect = 7e-50
 Identities = 88/140 (62%), Positives = 106/140 (75%)
 Frame = -2

Query: 446 VIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYATF 267
           +IGTKWVFRNK++E G ++RNKARLVAKGY QEEGID+DETFAPVAR+EAIR+ LAY++ 
Sbjct: 280 IIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLAYSSI 339

Query: 266 KNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAPRAWYDT 87
           KNF ++Q DVKSAFLN                     + VYKLKK LYGLKQAPR+WYD 
Sbjct: 340 KNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNPNHVYKLKKALYGLKQAPRSWYDR 399

Query: 86  LSQFLIDNGFTKGKVDRTLF 27
           LS+FLI+N + +GKVD TLF
Sbjct: 400 LSKFLIENDYERGKVDNTLF 419


>gb|KYP48537.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 216

 Score =  168 bits (426), Expect = 7e-50
 Identities = 83/140 (59%), Positives = 101/140 (72%)
 Frame = -2

Query: 446 VIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYATF 267
           +IGTKWVFRNK++E G ++RNKARLVAKGY QEEGID+DETF PVAR+EAIR+ LAY++ 
Sbjct: 27  IIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEEGIDYDETFTPVARIEAIRLLLAYSSI 86

Query: 266 KNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAPRAWYDT 87
            NF ++Q DVKS FLN                     + VYKLKK L GLKQAPR+WY+ 
Sbjct: 87  MNFKLYQMDVKSVFLNGLIQEEVYVEQPPDFVDFKNLNHVYKLKKALCGLKQAPRSWYNR 146

Query: 86  LSQFLIDNGFTKGKVDRTLF 27
           LS+FLI N + +GKVD TLF
Sbjct: 147 LSKFLIKNDYVRGKVDNTLF 166


>gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 772

 Score =  180 bits (456), Expect = 9e-50
 Identities = 88/140 (62%), Positives = 106/140 (75%)
 Frame = -2

Query: 446 VIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRMFLAYATF 267
           +IGTKWVFRNK++E G ++RNKARLVAKGY QEEGID+DETFAPVAR+EAIR+ LAY++ 
Sbjct: 541 IIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLAYSSI 600

Query: 266 KNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQAPRAWYDT 87
           KNF ++Q DVKSAFLN                     + VYKLKK LYGLKQAPR+WYD 
Sbjct: 601 KNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNPNHVYKLKKALYGLKQAPRSWYDR 660

Query: 86  LSQFLIDNGFTKGKVDRTLF 27
           LS+FLI+N + +GKVD TLF
Sbjct: 661 LSKFLIENDYERGKVDNTLF 680


>gb|KYP46032.1| Copia protein, partial [Cajanus cajan]
          Length = 369

 Score =  172 bits (437), Expect = 1e-49
 Identities = 85/147 (57%), Positives = 103/147 (70%)
 Frame = -2

Query: 467 SKASHQNVIGTKWVFRNKMNEEGSVVRNKARLVAKGYCQEEGIDFDETFAPVARLEAIRM 288
           S  S   +IGTKWVFRNK +E G ++RNKA+LVAKGY QEEGID+DETF PVAR++AIR+
Sbjct: 3   SLPSDHPIIGTKWVFRNKFDESGIIIRNKAKLVAKGYNQEEGIDYDETFVPVARIKAIRL 62

Query: 287 FLAYATFKNFTVFQTDVKSAFLNXXXXXXXXXXXXXXXEQKTIGDKVYKLKKTLYGLKQA 108
            L YA+  NF ++Q DVKS FLN                     + VYKLKK LYGLKQA
Sbjct: 63  LLFYASIMNFKLYQMDVKSVFLNGFIQEEVYVEQPLGFVDFKYPNHVYKLKKALYGLKQA 122

Query: 107 PRAWYDTLSQFLIDNGFTKGKVDRTLF 27
           PR+WYD LS+FLI+N + +GKVD TLF
Sbjct: 123 PRSWYDKLSKFLIENDYVRGKVDNTLF 149