BLASTX nr result
ID: Rehmannia27_contig00041325
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00041325
(2932 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera] 520 e-160
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera] 495 e-151
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 500 e-151
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 466 e-141
ref|XP_010692480.1| PREDICTED: uncharacterized protein LOC104905... 456 e-140
ref|XP_010260173.1| PREDICTED: uncharacterized protein LOC104599... 432 e-139
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 270 e-138
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 457 e-137
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera] 443 e-134
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 446 e-133
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 263 e-132
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo... 441 e-132
ref|XP_009128559.1| PREDICTED: uncharacterized protein LOC103853... 422 e-129
gb|KYP42296.1| Retrovirus-related Pol polyprotein from transposo... 417 e-128
ref|XP_010251928.1| PREDICTED: uncharacterized protein LOC104593... 405 e-127
emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera] 426 e-126
ref|XP_015575166.1| PREDICTED: uncharacterized protein LOC107261... 402 e-125
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 422 e-125
gb|KYP40816.1| Retrovirus-related Pol polyprotein from transposo... 231 e-124
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 419 e-123
>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
Length = 1535
Score = 520 bits (1339), Expect = e-160
Identities = 310/836 (37%), Positives = 447/836 (53%), Gaps = 17/836 (2%)
Frame = +3
Query: 21 PSEIVEIKDGDPLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGKIS 200
PS + +P SDHPG L+S PL G+NY +W R+M +AL AK KLGF+NG I
Sbjct: 30 PSNASKSDLSNPYFTHHSDHPGLVLISKPLNGDNYSAWRRAMALALNAKNKLGFVNGIIK 89
Query: 201 AP--DIASPMYEKWKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGP 374
AP + Y W + + MV SWI+N+++ +I D+ IY +TA ++WED+ ERF + N P
Sbjct: 90 APSEETHPDDYATWSRCNDMVHSWIVNTLNPEISDSVIYYATAHEVWEDLCERFSQSNAP 149
Query: 375 LLFQLKKEISNLKQGNSSVVVYFTKLKKLWDELSCLSPLPACSCGTSKLLSERDMNDRLM 554
+F++++EI+ +Q S+ VY+TKLK LWDEL+ S + +++D RLM
Sbjct: 150 RIFEIQREIAYHRQEQLSISVYYTKLKSLWDELA--------SYNDASSGAQQD-QQRLM 200
Query: 555 QFLMGLNDTYEHVRNQILIMDPLPNINKAYSMFLTVEKQR--SVQLAIADPLENSAMLSK 728
QFLMGLN++Y +R QIL+M+PLP+I +AYS EKQR S A+ ++AM +
Sbjct: 201 QFLMGLNESYSAIRGQILLMNPLPSIRQAYSSVCQEEKQRLLSATHTTAESNSSAAMAVR 260
Query: 729 LSNYPHNNTYKSAANNSSGYRNKG--------TYRRTKEEKAKLRCDHCQVMGHEVSECF 884
+ +N+ + ++ S + N RR+ K + +C +C MGH V +C+
Sbjct: 261 SNQMKNNSAGNARSDRSDRFYNSSQDSRRFDQDKRRSGSSKGRPQCTYCGEMGHFVEKCY 320
Query: 885 KLHGYPEWFKTFKEQKGKQSSANLVGSDNIRPAANTEGKSTQMPDMSMMIQQEIAKFLSG 1064
+LHGYP + N ++ + AN +G + + ++ Q++ L+
Sbjct: 321 QLHGYPPGHPKARTGSNFNRHKNTFVANQVSDGANKDGGKSVLTGITEAQLQQLLSLLND 380
Query: 1065 KMMNNPTSPDPSVSFAHFADFAGKLTPLTTHYAMSTLENLDSNSWILDTGASRHMCATPS 1244
K G + T A L + S+ WI+D A+ H+ ++P
Sbjct: 381 K-------------------DGGTSSQATAVVAKPGLFKISSHRWIIDNSATDHISSSPK 421
Query: 1245 FISQITPLSSIITVCLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSFKHNLLSISQLTQQ 1424
S+ V LP G + G + L L+DVL +P+FK +L+S+S+LT+
Sbjct: 422 LFLHKDKNISLPLVLLPSGEKANIVAKGSLPLNSVYYLRDVLCVPTFKVDLMSVSRLTRG 481
Query: 1425 SNLKCIFYPYHCVLQDLTS----GSGQVTWKALHITARTL*Y*FC*CQYS*QHQCIXXXX 1592
N F+P+ CVLQDL + G G+ ++ A T +
Sbjct: 482 LNCSVTFFPHWCVLQDLATRRMIGLGKQRDGLYYLAALTT------NKTETNSYSSPNRP 535
Query: 1593 XXXXXXXXAQEAWSCLPLSVATSS-EFLKPLCKPDVFKESQSCDIYHQSKQHRIVFPHST 1769
+ + W V+ S F+ + + C I +KQHR+ F S
Sbjct: 536 PTCNLTTSSTDLWHSRLGHVSHSRLSFIAKNFLNFSIQFNNDCPICLLAKQHRLPFGTSE 595
Query: 1770 IQSTSIFDLIHVDIWGLYKAECITNTPFLLNIVDDYSRATWTFLMTHKSQTLQLLKSFFT 1949
I S FDLIH DIWG YK ++ + L IVDDY+R TW FLM HK + L+K FF+
Sbjct: 596 ISSEKPFDLIHCDIWGRYKHSSLSGAHYFLTIVDDYTRFTWIFLMKHKDEAQPLIKHFFS 655
Query: 1950 MIHTQFNVKIKAIRSDNGSEFLSHDCQNFFQTCGVIHQKSCVYTPQQNGVVERRHRHLLN 2129
+ TQF IK RSDNG EFLS Q+FF+ GV+ Q SCVYTPQQNGVVER+HRH+L
Sbjct: 656 YVSTQFASHIKIFRSDNGGEFLS--LQSFFKDNGVLFQHSCVYTPQQNGVVERKHRHILQ 713
Query: 2130 IARALMFQSQVPHHLWPFSILTATYIANRLPHSSLNWQTPFSVLYNRHPDYTLLKPFGCL 2309
+ARAL FQ+Q+P W LTA +I NRLP L+++TPF LY + P Y+ L+ FGCL
Sbjct: 714 VARALKFQAQLPTQFWGECALTAVHIINRLPSPVLSFKTPFERLYLKPPTYSHLRVFGCL 773
Query: 2310 AYATNLSPQKSKFAQRAHKCIFVGYVPGQKGYTLYDLESHSLHTSRDVLFVESCFP 2477
AYATN+ KF RA CIF+GY GQK Y L++L + + TSRDV F E+ FP
Sbjct: 774 AYATNVH-VSHKFDHRAIACIFIGYPVGQKAYKLFNLSTRKIFTSRDVRFHENRFP 828
>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
Length = 1498
Score = 495 bits (1275), Expect = e-151
Identities = 313/856 (36%), Positives = 457/856 (53%), Gaps = 35/856 (4%)
Frame = +3
Query: 15 DTPSEIVEIKDGDPLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGK 194
+ P+ + +P SDHPG L+S L G+NY +W R+M++AL +K KLGF+NG
Sbjct: 5 EIPTNFSKADLSNPYFTHHSDHPGLVLISKSLNGDNYSAWKRAMILALNSKNKLGFVNGS 64
Query: 195 ISAP--DIASPMYEKWKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECN 368
I AP +I Y W + + MV SWI+N+++ +I ++ IY STA ++WED+ ERF + N
Sbjct: 65 IKAPSEEIDPEGYATWSRCNDMVHSWIVNTLNPEIANSVIYYSTAHEVWEDLCERFSQSN 124
Query: 369 GPLLFQLKKEISNLKQGNSSVVVYFTKLKKLWDELSCLSPLPACSCGTSKLLSERDMNDR 548
P +F+++++I+ L+Q SV Y+TKLK LWDEL+ + A + G +++D +
Sbjct: 125 APRIFEIQRDIACLRQEQLSVSAYYTKLKGLWDELASYN---AAAHG-----AQQD-QQK 175
Query: 549 LMQFLMGLNDTYEHVRNQILIMDPLPNINKAYSMFLTVEKQRSVQL--AIADPLENSAML 722
LMQFLMGLN++Y +R QIL+M+PLP++ +AYS EKQR + A A+ ++AM
Sbjct: 176 LMQFLMGLNESYSVIRGQILLMNPLPSVRQAYSTISQEEKQRLLTSTNAAAESAASAAMA 235
Query: 723 SKLSNYPHNNTYKSAANNSSGYRNKGT---------------------------YRRTKE 821
+ SN T+K + S+ R + T RR
Sbjct: 236 VR-SNGKSLTTWKDGIDRSNTRRMEPTNRPSGSQNFLENRSSQGQDGRPFFDQDRRRIGS 294
Query: 822 EKAKLRCDHCQVMGHEVSECFKLHGYPEWFKTFKEQKGKQSSANLVGSDNIRPAANTEGK 1001
+ + +C +C MGH V +CF+LHGYP + G S+ N S + + EGK
Sbjct: 295 GRGRPQCSYCGDMGHWVQKCFQLHGYPPDHPKARMNLGSNSNRNKSFSATNQVSEADEGK 354
Query: 1002 STQMPDMSMMIQQEIAKFLSGKMMNNPTSPDPSVSFAHFADFAGKLTPLTTHYAMSTLEN 1181
P +++ + ++ + LS ++NN S K+ +T L
Sbjct: 355 ----PAVALS-EAQLKQLLS--LLNNQDENSSS-----------KVNAVT----KPGLSK 392
Query: 1182 LDSNSWILDTGASRHMCATPSFISQITPLSSIITVCLPDGSTKPVTHTGHITLTPTLKLQ 1361
+ S +WI+D+GA+ H+ ++ + + S+ V LP G + G + L L
Sbjct: 393 VASRNWIIDSGATDHITSSSKLLHK-DKNCSLPLVLLPSGEKANIVTKGTLPLNSVYYLH 451
Query: 1362 DVLIIPSFKHNLLSISQLTQQSNLKCIFYPYHCVLQDL----TSGSGQVTWKALHITART 1529
DVL +P+FK +L+S+S+LT+ N F+PY C+LQDL T G G+ + ++ A
Sbjct: 452 DVLSVPTFKVDLISVSRLTKGLNCSVTFFPYWCILQDLATRRTIGLGKQRDRLYYLVA-- 509
Query: 1530 L*Y*FC*CQYS*QHQCIXXXXXXXXXXXXAQEAWSCLPLSVATSSEFLKPLCKPDVFKES 1709
+ +C ++A SS L + +
Sbjct: 510 -----------------LATEKSLTNHSSSTNQPAC---NLAISS---TDLWHSRLGHSN 546
Query: 1710 QSCDIYHQSKQHRIVFPHSTIQSTSIFDLIHVDIWGLYKAECITNTPFLLNIVDDYSRAT 1889
+C I +KQ R+ F S I ST F++IH DIWG Y+ + + L IVDDY+R T
Sbjct: 547 NACPICPLAKQSRLPFGTSAISSTKPFEIIHCDIWGRYRHPSLFGAHYFLTIVDDYTRFT 606
Query: 1890 WTFLMTHKSQTLQLLKSFFTMIHTQFNVKIKAIRSDNGSEFLSHDCQNFFQTCGVIHQKS 2069
W FLM HK + LLK FF+ + TQF +IK RSDN EF S ++FFQ GVI Q S
Sbjct: 607 WIFLMRHKDEAQSLLKRFFSYVFTQFEFRIKTFRSDNXXEFTS--LRSFFQDNGVIFQHS 664
Query: 2070 CVYTPQQNGVVERRHRHLLNIARALMFQSQVPHHLWPFSILTATYIANRLPHSSLNWQTP 2249
CVYTPQQNGVVER+HRH+L +ARAL F +QVP W LTA +I NRL L+++TP
Sbjct: 665 CVYTPQQNGVVERKHRHILQVARALKFHAQVPTQFWGECALTAVHIINRLXSPILSFKTP 724
Query: 2250 FSVLYNRHPDYTLLKPFGCLAYATNLSPQKSKFAQRAHKCIFVGYVPGQKGYTLYDLESH 2429
F +LY + P Y+ L+ FGCLAYATN+ KF RA IF+GY GQK Y L+DL +
Sbjct: 725 FELLYLKSPXYSHLRVFGCLAYATNVH-TSHKFDYRAMPSIFIGYPVGQKAYKLFDLSTK 783
Query: 2430 SLHTSRDVLFVESCFP 2477
+ TSRDV F E FP
Sbjct: 784 KVFTSRDVKFHEDIFP 799
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 500 bits (1288), Expect = e-151
Identities = 303/831 (36%), Positives = 440/831 (52%), Gaps = 13/831 (1%)
Frame = +3
Query: 24 SEIVEIKDGDPLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGKISA 203
SE I PL++ SD PG LV L G NY SWS++++ AL K K+GF++G +
Sbjct: 292 SENKTIDPSHPLYIHHSDQPGHVLVPIKLNGVNYQSWSKAVIHALTTKKKIGFVDGTVEE 351
Query: 204 PDIASP--MYEKWKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGPL 377
P M+E+W + + M++SW+ +++ DI + I+A TAR++W D+ ++F + N P
Sbjct: 352 PSQEDEPFMFEQWNQCNSMILSWLTHAVESDIAEGIIHAKTAREVWVDLRDQFSQKNAPA 411
Query: 378 LFQLKKEISNLKQGNSSVVVYFTKLKKLWDELSCL-SPLPACSCGTSKLLSERDMNDRLM 554
+FQ++K I+ + QG +V YFTK+K LWDEL SPL +C + E+ DRLM
Sbjct: 412 VFQIQKSIATMSQGTMTVAAYFTKIKALWDELETYRSPL---TCNQRQAHLEQREEDRLM 468
Query: 555 QFLMGLNDTYEHVRNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIADPLENSAMLSKLS 734
QFLMGLN++Y+ VR+ IL+M PLPN+ +AYS+ + E QR V ++P EN ++ + +
Sbjct: 469 QFLMGLNESYKAVRSNILMMSPLPNVRQAYSLIVQEEMQRQVS---SEPTENFSIAAAVP 525
Query: 735 NYPHNNTYKSAANNSSGYRNKGTYRRTKEEKAKLRCDHCQVMGHEVSECFKLHGYPEWFK 914
N K + N+ + + K C C GH C +G
Sbjct: 526 GKGGNPRQKMC-----DHCNRSGHTIDECRTLKFHCKFCDKRGHTEDRCRLKNGSNNKTG 580
Query: 915 TFKEQK----GKQSSANLVGSDNIRPAANTEGKSTQMPDMSMMIQQEIAKFLSGKMMNNP 1082
F+ Q+ G Q SAN S + +++ ST + IQQ +A+ + +N
Sbjct: 581 QFRGQRPFGRGNQPSANATESQEM---SDSTSSSTVQGFTTEQIQQ-LAQAIRALNHSNS 636
Query: 1083 TSPDPSVSFAHFADFAGKLTPLTTHYAMSTLENLDSNSWILDTGASRHMCATPSFISQIT 1262
+ D + A GA+ H+ + S + +
Sbjct: 637 GNIDAYANAA---------------------------------GATDHIVSHMSLFTDLK 663
Query: 1263 PLSSIITVCLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSFKHNLLSISQLTQQSNLKCI 1442
P S++ TV LP+G P+THTG + L L+DVL +PSF NL+S S+L + N I
Sbjct: 664 P-SNVTTVNLPNGVASPITHTGTVIFDSQLTLKDVLCVPSFNLNLISASKLAKDQNCYII 722
Query: 1443 FYPYHCVLQDLTSG----SGQVTWKALHITARTL*Y*FC*CQYS*QHQCIXXXXXXXXXX 1610
F+P +C+LQDL SG SG+ ++ T
Sbjct: 723 FFPDYCILQDLVSGKMIGSGKQRGGLYYMHPST-------------------NKSVVFHV 763
Query: 1611 XXAQEAWSCLPLSVATSSEF-LKPLCKPDVFKE-SQSCDIYHQSKQHRIVFPHSTIQSTS 1784
+ W L L + S F L PD+ KE C I Q+KQ R+ FP S+I +
Sbjct: 764 SQPSDLWH-LRLGHPSFSRFKLLSRLLPDIHKEIGNHCPICPQAKQTRLPFPKSSITTKF 822
Query: 1785 IFDLIHVDIWGLYKAECITNTPFLLNIVDDYSRATWTFLMTHKSQTLQLLKSFFTMIHTQ 1964
F L+H D+WG +K T + + L IVDD+SR TW FLM HKS+T LL +F + TQ
Sbjct: 823 PFSLLHCDVWGPHKIPAHTGSRYFLTIVDDFSRCTWIFLMHHKSETQSLLTNFVQFVKTQ 882
Query: 1965 FNVKIKAIRSDNGSEFLSHDCQNFFQTCGVIHQKSCVYTPQQNGVVERRHRHLLNIARAL 2144
F+ ++ +R DNG+EF+ + F Q G+ Q SC+YTPQQNGVVER+HRH+LN+AR+L
Sbjct: 883 FHTDVQTVRMDNGTEFIP--LRIFLQNKGIELQTSCIYTPQQNGVVERKHRHILNVARSL 940
Query: 2145 MFQSQVPHHLWPFSILTATYIANRLPHSSLNWQTPFSVLYNRHPDYTLLKPFGCLAYATN 2324
MFQS VP W +LTA Y+ NR+P L+ ++PF VLYNR P T L+ FGC Y TN
Sbjct: 941 MFQSNVPLEFWGECVLTAVYLINRIPTPLLSNKSPFEVLYNRPPSLTHLRVFGCECYVTN 1000
Query: 2325 LSPQKSKFAQRAHKCIFVGYVPGQKGYTLYDLESHSLHTSRDVLFVESCFP 2477
+ P K KF RA C+F+GY G+KGY + DL++ + SRDV F E+ FP
Sbjct: 1001 VHP-KQKFDPRASICVFLGYPHGKKGYKVLDLQTQKISVSRDVFFRENIFP 1050
Score = 64.3 bits (155), Expect = 9e-07
Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Frame = +3
Query: 2601 EPQLRRSTRETRHPAWWEDFVTNV---HDDLPSDTNXXXXXXXXXXXXPNTFPYTSSSLF 2771
EP LRRSTR + PAW D+V + H S + +P +S F
Sbjct: 1152 EPPLRRSTRHIQPPAWHHDYVMSAQLNHSSTQSSSRQG-----------TRYPLSSHLSF 1200
Query: 2772 -----HHTYLSFLAKVDTIQEPKSYFQAKTNAKWVEAMNQELQALEHNHTWILTDLP 2927
HH +FLA + EP S+ QA + +W +AM+ ELQALE N+TW + LP
Sbjct: 1201 FRFSPHHR--AFLALLTAQTEPSSFEQADCDPRWRQAMSTELQALERNNTWEMVPLP 1255
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 466 bits (1199), Expect = e-141
Identities = 296/835 (35%), Positives = 426/835 (51%), Gaps = 26/835 (3%)
Frame = +3
Query: 51 DPLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGKISAPDIASPMYE 230
DP L SDHPG LVS + G+NY +WSR+M I+L AK K+GF+ G I P +
Sbjct: 76 DPFSLHHSDHPGMVLVSKVIEGDNYSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDDSFP 135
Query: 231 KWKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGPLLFQLKKEISNL 410
W++ + M + + E++ F + N ++Q+K++I
Sbjct: 136 SWQRCNDM-------------------HQKSGQICENV---FRQGNDSRIYQIKRDIVEH 173
Query: 411 KQGNSSVVVYFTKLKKLWDELSCLSPLPACSCGTSKLLSERDMNDRLMQFLMGLNDTYEH 590
+QG S+ VY+TKLK WDELS + +CSCG + L ERD +R+MQFLMGLND+Y
Sbjct: 174 RQGQQSISVYYTKLKAFWDELSSYHEVLSCSCGGLEKLKERDEKERVMQFLMGLNDSYAA 233
Query: 591 VRNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIADPLENSAMLSKLSNYPHNNTYKSAA 770
+R QIL+M PLP+ + YS+ L EKQ V L N + N Y A
Sbjct: 234 IRGQILLMHPLPDTRRVYSLVLQQEKQVEVSL----------------NNGNKNHYAMLA 277
Query: 771 NNSSGYRNKGTY-RRTKEEKAKLRCDHCQVMGHEVSECFKLHGYPEWFK----TFKEQKG 935
+ NK T + +++K L C +C H + +C+ LHG+P K K
Sbjct: 278 DRD----NKATSAHQVQKQKTPLHCSYCDRDYHSIEKCYYLHGFPIGHKLHGKNVKPPNQ 333
Query: 936 KQSSANLVGSDNIRPAANTEGKSTQMPDMSMMIQQEIAKFLSGKMMNNPTSPDPSVSFAH 1115
+ S+AN V + + A TE K D + +E + ++ NN + H
Sbjct: 334 RHSNANNVKVETNK-AVETEAKLLPTNDGPRLTTEEYNQLMAMIRKNNGGNSQ------H 386
Query: 1116 FADFAG------KLTPLTTHYAMSTLENLDSNSWILDTGASRHMCATPSFISQITPLSSI 1277
FA+ G K+ P H M WI+D+GA+ H+ ++ + L
Sbjct: 387 FANATGINMSSSKIIPNCPHSNMC---------WIIDSGATDHVTSSAELLDPKN-LPKT 436
Query: 1278 ITVCLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSFKHNLLSISQLTQQSNLKCIFYPYH 1457
T+ LP+G + G + +TP +KL DVL +P F+ NLLS+S+LT+ +F+
Sbjct: 437 TTISLPNGGQAHIESIGSLHVTPHIKLDDVLKVPQFQVNLLSVSKLTRALQCIVMFFFDF 496
Query: 1458 CVLQDLTSGSGQVTWKALHITARTL*Y*FC*CQYS*QHQCIXXXXXXXXXXXXAQEAWSC 1637
CV+QD T+ + I AQ+
Sbjct: 497 CVVQDATT-----------------------------RKTIGLGKQHNGLYYLAQDQNPA 527
Query: 1638 LPLSVATSSEF------------LKPLCK--PDVFKESQS-CDIYHQSKQHRIVFPHSTI 1772
L ++ S+ L+ L K P ++ +S+ CDI +KQ R+ FP S I
Sbjct: 528 LAYAIHKHSDLWHQRLGHPSSGPLQVLAKVNPKIYFDSKHVCDICPLAKQTRLSFPSSFI 587
Query: 1773 QSTSIFDLIHVDIWGLYKAECITNTPFLLNIVDDYSRATWTFLMTHKSQTLQLLKSFFTM 1952
S + FDLIH DIWG ++ + + L IVDD++R TW LM+ KS+T +L+SF +
Sbjct: 588 SSHAPFDLIHCDIWGPHRINSHSGAXYFLTIVDDHTRYTWIHLMSFKSETQGILQSFISW 647
Query: 1953 IHTQFNVKIKAIRSDNGSEFLSHDCQNFFQTCGVIHQKSCVYTPQQNGVVERRHRHLLNI 2132
+ TQFN IK +R+DNG+E S + + T G+ + SC YTPQQNGVVER+HRHLLN+
Sbjct: 648 VETQFNRCIKTLRTDNGTEISS--MKQYLDTKGINYHHSCAYTPQQNGVVERKHRHLLNV 705
Query: 2133 ARALMFQSQVPHHLWPFSILTATYIANRLPHSSLNWQTPFSVLYNRHPDYTLLKPFGCLA 2312
RAL FQ+ +P W SI TA Y+ NRLP L+ ++P+ +L N+ P Y L+ FGCL
Sbjct: 706 GRALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLRTFGCLC 765
Query: 2313 YATNLSPQKSKFAQRAHKCIFVGYVPGQKGYTLYDLESHSLHTSRDVLFVESCFP 2477
YATNL P KF QRA +CIFVGY GQKGY +YDL ++ +S DV+F E FP
Sbjct: 766 YATNLLP-THKFDQRARRCIFVGYPLGQKGYRVYDLXTNKFFSSXDVVFHEHIFP 819
>ref|XP_010692480.1| PREDICTED: uncharacterized protein LOC104905592 [Beta vulgaris subsp.
vulgaris]
Length = 1085
Score = 456 bits (1172), Expect = e-140
Identities = 286/853 (33%), Positives = 435/853 (50%), Gaps = 45/853 (5%)
Frame = +3
Query: 54 PLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGKISAPDIASPMYEK 233
P +L D PG+ + TG+NY++W+R+M ++L A+ K GF++G I+ PD + + +
Sbjct: 21 PFYLGSGDQPGNVITHVIFTGDNYVAWARAMTLSLRARRKYGFVDGTITKPDDPNALLD- 79
Query: 234 WKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGPLLFQLKKEISNLK 413
W+ V M++SW+L S+ I ARDLW + RF +GP + Q+K IS+ K
Sbjct: 80 WETVHSMIVSWMLRSMEPKIAATVPLHENARDLWLYLERRFCVAHGPRVQQIKAAISDCK 139
Query: 414 QGNSSVV-VYFTKLKKLWDELSCLSPLPACSC-----GTSKLLSERDMNDRLMQFLMGLN 575
Q + Y+ KL L+DEL + PLP+C C G S LS+ + QFL+GL+
Sbjct: 140 QTEGMKIDEYYAKLMGLYDELVRVKPLPSCECKQCHCGLSLKLSKDREEEIFHQFLIGLD 199
Query: 576 DTYEHVRNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIADPLENSAMLSKLSNYPHNNT 755
Y VR +L PL ++N+AY + E+ R++ T
Sbjct: 200 PKYATVRTNLLSQQPLGDLNRAYQALVQEEQSRAIPRG-------------------RET 240
Query: 756 YKSA-ANNSSGYRNKGTYRRTKEEKAKLRCDHCQVMGHEVSECFKLHGYPEWFKTFKEQK 932
++S A + + R KG + +K+KL C HC+ GHEVS CFK+HG P W++ E+
Sbjct: 241 HESVQAFHVNSDRGKGRFDHV--DKSKLLCSHCKQKGHEVSTCFKIHGNPAWYE---ERL 295
Query: 933 GKQSSANLVGSDNIRPAANTEGKSTQMPDMSMMIQQEIAKFLSGKMMNNPTSPDPS---- 1100
+S+ V S P G+S+ + +G ++ P++ +
Sbjct: 296 RARSAGRGVSSGAGGPHVGAGGQSST----------PVTSRGAGSGVSTPSTTGGARAHV 345
Query: 1101 VSFAHFADFAGKLTPLTTH-----YAMSTLENLDSNS-------------WILDTGASRH 1226
VS HF PL A+ TL N + S WI+DTGAS H
Sbjct: 346 VSDGHFPPSGEGGVPLANLTPEQIQALMTLMNYNEQSTDERMTGETCDIAWIIDTGASHH 405
Query: 1227 MCATPSFISQITPLSSIITVCLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSFKHNLLSI 1406
+ T S +S + + V LP+G T T G + LT + L+DVL +P+F NL+S+
Sbjct: 406 ITGTFSCLSNVRDIEGC-PVGLPNGHTALATQQGDVYLTSHIVLRDVLFVPAFHCNLISV 464
Query: 1407 SQLTQQSNLKCIFYPYHCVLQDLTSG----SGQ-----------VTWKALHITARTL*Y* 1541
S L ++ F P C +QDL SG +G+ +A+ + + +L
Sbjct: 465 SHLVSDNHCTIQFTPSLCAIQDLPSGTLIGAGERRGGLYYFRTVAVVQAVGVPSLSL--- 521
Query: 1542 FC*CQYS*QHQCIXXXXXXXXXXXXAQEAWSCLPLSVATSSEFLKPLCKPDVFKESQSCD 1721
+ HQ + ++ LP ++S D K + CD
Sbjct: 522 -----FDLWHQRLGHP---------SERVVKLLPAIKSSS----------DKKKLNNVCD 557
Query: 1722 IYHQSKQHRIVFPHSTIQSTSIFDLIHVDIWGLYKAECITNTPFLLNIVDDYSRATWTFL 1901
+ +KQ R FP S +++ +F+L+H D+WG Y + L +VDDYSRA W +L
Sbjct: 558 VCPMAKQTRDSFPTSEHKASRLFELVHCDLWGPYSVPSSCGAVYFLTLVDDYSRAVWVYL 617
Query: 1902 MTHKSQTLQLLKSFFTMIHTQFNVKIKAIRSDNGSEFLSHDCQ-NFFQTCGVIHQKSCVY 2078
+ +K++ Q SFF M+ QF+ +K +RSDNG+EF +C FFQT G++ Q SC
Sbjct: 618 LKNKTKVYQYFTSFFAMVARQFDTSVKIVRSDNGTEF---NCMLPFFQTSGILFQTSCTG 674
Query: 2079 TPQQNGVVERRHRHLLNIARALMFQSQVPHHLWPFSILTATYIANRLPHSSLNWQTPFSV 2258
TPQQNG VER+H+H+LN++RALMFQ +P H W +LTA ++ NR P L +TP+ +
Sbjct: 675 TPQQNGRVERKHQHILNVSRALMFQGHLPVHFWGECVLTAVHLINRTPSGVLGNKTPYEM 734
Query: 2259 LYNRHPDYTLLKPFGCLAYATNLSPQKSKFAQRAHKCIFVGYVPGQKGYTLYDLESHSLH 2438
++ P++ LL+ FGCL +A N + KFA R+ KCIF+GY G+KG+ LYDLES ++
Sbjct: 735 IFGELPEFDLLRVFGCLCFAHNQKAKGDKFAPRSRKCIFIGYPTGKKGWKLYDLESGAIF 794
Query: 2439 TSRDVLFVESCFP 2477
SRDV F+E FP
Sbjct: 795 VSRDVQFLEESFP 807
>ref|XP_010260173.1| PREDICTED: uncharacterized protein LOC104599359 [Nelumbo nucifera]
Length = 783
Score = 432 bits (1110), Expect(3) = e-139
Identities = 219/477 (45%), Positives = 299/477 (62%)
Frame = +3
Query: 45 DGDPLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGKISAPDIASPM 224
+GDPL LQ SDHP LVS+PLT NNYL+WSRSM +A GAK KLGFING AP+ SP
Sbjct: 39 NGDPLFLQNSDHPSMILVSSPLTENNYLTWSRSMKVAFGAKVKLGFINGSCKAPEPDSPT 98
Query: 225 YEKWKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGPLLFQLKKEIS 404
+E+W +VDCMV SWILNSISKDIVDAF+Y+++ARDLW ++ ERFG+ NGPL + L+++IS
Sbjct: 99 FEQWTRVDCMVTSWILNSISKDIVDAFLYSTSARDLWLELEERFGDSNGPLQYHLQRDIS 158
Query: 405 NLKQGNSSVVVYFTKLKKLWDELSCLSPLPACSCGTSKLLSERDMNDRLMQFLMGLNDTY 584
+ QGN ++ Y+TKLKKLWDEL+ SK + + ++RLMQFLMGLND++
Sbjct: 159 TISQGNLTMAQYYTKLKKLWDELA------------SKRMCDITSSNRLMQFLMGLNDSF 206
Query: 585 EHVRNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIADPLENSAMLSKLSNYPHNNTYKS 764
+H++NQIL+MDPLP +NKAYS+ L V+KQR V +A A+ ++ +AML++ NY + T +
Sbjct: 207 DHIKNQILLMDPLPTVNKAYSLVLRVKKQRDVHIAFAETVDGNAMLARSQNYRKDGTGRC 266
Query: 765 AANNSSGYRNKGTYRRTKEEKAKLRCDHCQVMGHEVSECFKLHGYPEWFKTFKEQKGKQS 944
A GY ++ ++ CDHC GH CFK++ YP+W+K +EQKG
Sbjct: 267 ATRKPPGYGRSELQKQDYDKTEYRHCDHCNRDGHTKESCFKIYDYPDWYKDLREQKG--- 323
Query: 945 SANLVGSDNIRPAANTEGKSTQMPDMSMMIQQEIAKFLSGKMMNNPTSPDPSVSFAHFAD 1124
NT+G+ + SG+ M P +++
Sbjct: 324 --------------NTQGRGRE--------------GFSGRFMTTPI----GTRWSYLDT 351
Query: 1125 FAGKLTPLTTHYAMSTLENLDSNSWILDTGASRHMCATPSFISQITPLSSIITVCLPDGS 1304
+AG + STL LD +WI+DTGAS HMC +SQ P++ II + LPDG+
Sbjct: 352 YAGMKVQYAFNSKDSTLAVLDVGTWIVDTGASNHMCTDLKLLSQPKPITQIIPIHLPDGT 411
Query: 1305 TKPVTHTGHITLTPTLKLQDVLIIPSFKHNLLSISQLTQQSNLKCIFYPYHCVLQDL 1475
K V H GH+ L+P L L + L IPSFK NLLS+S+L +N+KC FYP +C+ QDL
Sbjct: 412 IKFVQHIGHVKLSPDLILTNTLHIPSFKFNLLSVSKLVIINNIKCTFYPTYCLQQDL 468
Score = 86.3 bits (212), Expect(3) = e-139
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = +3
Query: 1716 CDIYHQSKQHRIVFPHSTIQSTSIFDLIHVDIWGLYKAECITNTPFLLNIVDDYSRATWT 1895
C+IYH +KQ R+ FP S I+S SI DL+H+D+WG YK IT+ ++ +VDD++R+TW
Sbjct: 563 CEIYHLAKQQRLPFPVSKIRSKSIIDLMHLDLWGPYKHPSITSAHYVFTLVDDFNRSTWI 622
Query: 1896 FLMTHKSQT 1922
FL+ HKS T
Sbjct: 623 FLLNHKSMT 631
Score = 31.2 bits (69), Expect(3) = e-139
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 19/81 (23%)
Frame = +1
Query: 1477 LVGVGKLHGRLYILQQGLSSTNSVDVSTPSNISVSHFLSCNLSFD--------------- 1611
++ VGK+ LYIL + S + + + + +CN +F
Sbjct: 473 ILAVGKMIKNLYILDKSSFSADRIQSFVCNKEFAQN--ACNRTFQAATCNKSHFFNKTSI 530
Query: 1612 ----LWHKRLGHASPYLLQHL 1662
LWH LGHAS LQHL
Sbjct: 531 PGLVLWHNGLGHASVTALQHL 551
Score = 67.4 bits (163), Expect = 8e-08
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = +3
Query: 2322 NLSPQKSKFAQRAHKCIFVGYVPGQKGYTLYDLESHSLHTSRDVLFVESCFP 2477
+++P K KFA RA KCIF+GY GQK Y+LYDL L TSRDV+F E FP
Sbjct: 629 SMTPHKDKFAPRALKCIFLGYSLGQKAYSLYDLNDRKLFTSRDVIFHEDIFP 680
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 270 bits (690), Expect(3) = e-138
Identities = 147/404 (36%), Positives = 212/404 (52%)
Frame = +3
Query: 1716 CDIYHQSKQHRIVFPHSTIQSTSIFDLIHVDIWGLYKAECITNTPFLLNIVDDYSRATWT 1895
C I ++KQ + FP S + FDLIH+D WG + + L IVDDYSRATW
Sbjct: 618 CSICQKAKQKHLSFPSKNNMSENKFDLIHIDTWGPFATPTTEGYKYFLTIVDDYSRATWV 677
Query: 1896 FLMTHKSQTLQLLKSFFTMIHTQFNVKIKAIRSDNGSEFLSHDCQNFFQTCGVIHQKSCV 2075
+LM K+ LQ+ F M+ TQ+ +KA+RSDN E + +Q G+I SC
Sbjct: 678 YLMKAKNDVLQIFPDFLKMVETQYGTLVKAVRSDNAPELRF---EALYQAKGIISYHSCP 734
Query: 2076 YTPQQNGVVERRHRHLLNIARALMFQSQVPHHLWPFSILTATYIANRLPHSSLNWQTPFS 2255
TPQQN VVER+H+H+LN+ARALMF++ +P W IL+A ++ NRLP L+ ++PF
Sbjct: 735 ETPQQNSVVERKHQHILNVARALMFEANMPLEFWGDCILSAVFLINRLPTPLLSNKSPFE 794
Query: 2256 VLYNRHPDYTLLKPFGCLAYATNLSPQKSKFAQRAHKCIFVGYVPGQKGYTLYDLESHSL 2435
+L+ + PDYT LK FGCL Y + Q+ KFA RA C+F+GY G KGY L DLE++++
Sbjct: 795 LLHLKVPDYTSLKVFGCLCYESTSPQQRHKFAPRARACVFLGYPSGYKGYKLLDLETNTI 854
Query: 2436 HTSRDVLFVESCFPCXXXXXXXXXXXXXXXXXMDADSFVXXXXXXXXXXXXXXXAEPQLR 2615
H SR V+F E+ FP D V + P++
Sbjct: 855 HISRHVVFYETVFP----------FTDKTIIPRDVFDLVDPVHENIENPPSTSESAPKV- 903
Query: 2616 RSTRETRHPAWWEDFVTNVHDDLPSDTNXXXXXXXXXXXXPNTFPYTSSSLFHHTYLSFL 2795
S RE+R P + +D+ N D+ D Y + + + +++
Sbjct: 904 SSKRESRPPGYLQDYFCNAVPDVTKDVRYPLN------------AYINYTQLSEEFTAYI 951
Query: 2796 AKVDTIQEPKSYFQAKTNAKWVEAMNQELQALEHNHTWILTDLP 2927
V+ EP +Y QAK +W++AM E+ ALE +TW + LP
Sbjct: 952 CAVNKYPEPCTYAQAKKIKEWLDAMEIEIDALESTNTWSVCSLP 995
Score = 237 bits (604), Expect(3) = e-138
Identities = 155/497 (31%), Positives = 249/497 (50%), Gaps = 24/497 (4%)
Frame = +3
Query: 54 PLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGKISAPDIASPMYEK 233
P L D PG+TLVS L G N+ SW +M ++L AK K+ F++G + P + P +
Sbjct: 63 PFALSNGDSPGNTLVSEVLDGTNFSSWKIAMFVSLYAKNKIAFVDGTLPRPPESDPSFRV 122
Query: 234 WKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGPLLFQLKKEISNLK 413
W + + MV SWILNS++K I + + + A ++W+D+ RF N P +QL ++I +L+
Sbjct: 123 WSRCNSMVKSWILNSVTKQIYKSILRFNDAAEIWKDLDTRFHITNLPRSYQLTQQIWSLQ 182
Query: 414 QGNSSVVVYFTKLKKLWDEL---SCLSPLPACSC--GTSKLLSERDMNDRLMQFLMGLND 578
QG S+ Y+T LK LWD+L SC+S C+C T+ ++ + ++++FL GLN+
Sbjct: 183 QGTMSLSDYYTALKTLWDDLDGASCVSTCKNCTCCIATASMIE----HSKIVKFLSGLNE 238
Query: 579 TYEHVRNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIADPLENSAMLSKLSNYPHNNTY 758
+Y +R+QI++ +P++ + Y++ QR++ + P S T+
Sbjct: 239 SYSTIRSQIIMKKTIPDLAEIYNLLDQDHSQRNI---VTMPTNAS-------------TF 282
Query: 759 KSAANNSSGYRNKGTYRRTKEEKAKLRCDHCQVMGHEVSECFKLHGYPEWFK------TF 920
+A S + + K K++C HC GH C+K+HGYP FK
Sbjct: 283 NVSAPQSDQFAVNLAKSFGTQPKPKVQCSHCGYTGHNADTCYKIHGYPVGFKHKDKKTVT 342
Query: 921 KEQKGKQSSANLV---GSDNIRPAANTEGKSTQMPDMSMMIQQEIAKFLSGKMMNNPTSP 1091
+K K ANL G ++ +G + MS Q++ + S ++NP P
Sbjct: 343 PSEKPKSVVANLALTDGKVSVTQGIGPDGIVELVGSMSKSQIQDVIAYFS-TQLHNPAKP 401
Query: 1092 DPSVSFA-----HFADFAG-KLTPLTTHYAMSTLEN---LDSNSWILDTGASRHMCATPS 1244
SFA + + F G +P T S + L N+WI+D+GA+ H+ +
Sbjct: 402 ITVASFASTNNDNGSTFTGISFSPSTLRLLCSLTSSKKVLSLNTWIIDSGATHHVSYDRN 461
Query: 1245 FISQITP-LSSIITVCLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSFKHNLLSISQLTQ 1421
++ LS+ +T LP GS + G I L L L++VL IP F+ NLLS+SQ T+
Sbjct: 462 LFESLSDGLSNEVT--LPTGSNVKIAGIGVIKLNSNLTLKNVLYIPEFRLNLLSVSQQTK 519
Query: 1422 QSNLKCIFYPYHCVLQD 1472
K F CV+QD
Sbjct: 520 DMKCKIYFDEDCCVIQD 536
Score = 37.0 bits (84), Expect(3) = e-138
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 1480 VGVGKLHGRLYILQQGLSSTNSVDVSTPSNISVSHFLSCNLSFD--LWHKRLGHAS 1641
+G G G LY+L SVD+ N SV+ CN D LWH RLGH S
Sbjct: 543 IGRGNQIGGLYVLDTSSVECTSVDI----NSSVTEKQYCNAVVDSALWHSRLGHPS 594
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 457 bits (1175), Expect = e-137
Identities = 303/967 (31%), Positives = 459/967 (47%), Gaps = 9/967 (0%)
Frame = +3
Query: 54 PLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGKISAPDIASPMYEK 233
P L +DHPG ++S L NY WS +MLI+L AK K GFI+G +S P + +
Sbjct: 61 PFFLHSADHPGLNIISHRLDETNYGDWSVAMLISLDAKNKTGFIDGTLSRPLESDLNFRL 120
Query: 234 WKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGPLLFQLKKEISNLK 413
W + + MV SW+LNS+S I + + + A D+W D+ RF N P + L +EI + +
Sbjct: 121 WSRCNSMVKSWLLNSVSPQIYRSILRMNDASDIWRDLNSRFNVTNLPRTYNLTQEIQDFR 180
Query: 414 QGNSSVVVYFTKLKKLWDELSCLSPLPA-CSCGTSKLLSERDMNDRLMQFLMGLNDTYEH 590
QG S+ Y+T+LK LWD+L L C+CG + L ++ ++++FL GLN++Y
Sbjct: 181 QGTLSLSEYYTRLKTLWDQLDSTEALDEPCTCGKAMRLQQKAEQAKIVKFLAGLNESYAI 240
Query: 591 VRNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIADPLENSAMLSKLSNYPHNNTYKSAA 770
VR QI+ LP++ + Y + Q+S +A P + +S+++ P +
Sbjct: 241 VRRQIIAKKALPSLGEVYHILDQDNSQQSFSNVVAPPA--AFQVSEITQSPSMDPTVCYV 298
Query: 771 NNSSGYRNKGTYRRTKEEKAKLRCDHCQVMGHEVSECFKLHGYPEWFKTF-----KEQKG 935
N NKG + C +GH C+K HG+P F K QK
Sbjct: 299 QNGP---NKG----------RPICSFYNRVGHIAERCYKKHGFPPGFTPKGKAGEKLQKP 345
Query: 936 KQSSANLVGSDNIRPAANTEGKSTQMPDMSMMIQQEIAKFLSGKMMNNPTSPDPSVSFAH 1115
K +AN+ S + NT +S +QQ IA F S ++ N P S + S +
Sbjct: 346 KPLAANVAESSEV----NTSLESMVGNLSKEQLQQFIAMF-SSQLQNTPPSTYATASTSQ 400
Query: 1116 FADFAGKLTPLTTHYA---MSTLENLDSNSWILDTGASRHMCATPSFISQITPLSSIITV 1286
+ +P T + L S +W++D+GA+ H+ S S + S + V
Sbjct: 401 SDNLGICFSPSTYSFIGILTVARHTLSSATWVIDSGATHHVSHDRSLFSSLDT-SVLSAV 459
Query: 1287 CLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSFKHNLLSISQLTQQSNLKCIFYPYHCVL 1466
LP G T ++ G + L + L++VL IP F+ NL+SIS LT + IF C +
Sbjct: 460 NLPTGPTVKISGVGTLKLNDDILLKNVLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEI 519
Query: 1467 QDLTSGSGQVTWKALHITARTL*Y*FC*CQYS*QHQCIXXXXXXXXXXXXAQEAWSCLPL 1646
QDL G++ + + L Q I + + L
Sbjct: 520 QDLIK--GRMLGQGRRVANLYL--------LDVGDQSISVNAVVDISMWHRRLGHASLQR 569
Query: 1647 SVATSSEFLKPLCKPDVFKESQSCDIYHQSKQHRIVFPHSTIQSTSIFDLIHVDIWGLYK 1826
A S K K S C + H +KQ ++ FP S IFDL+H+D+WG +
Sbjct: 570 LDAISDSLGTTRHKN---KGSDFCHVCHLAKQRKLSFPTSNKVCKEIFDLLHIDVWGPFS 626
Query: 1827 AECITNTPFLLNIVDDYSRATWTFLMTHKSQTLQLLKSFFTMIHTQFNVKIKAIRSDNGS 2006
E + + L IVDD+SRATW +L+ KS+ L + +F + Q+ VK+KA+RSDN
Sbjct: 627 VETVEGYKYFLTIVDDHSRATWMYLLKTKSEVLTVFPAFIQQVENQYKVKVKAVRSDNAP 686
Query: 2007 EFLSHDCQNFFQTCGVIHQKSCVYTPQQNGVVERRHRHLLNIARALMFQSQVPHHLWPFS 2186
E +F+ G++ SC TP+QN VVER+H+H+LN+ARALMFQSQVP LW
Sbjct: 687 EL---KFTSFYAEKGIVSFHSCPETPEQNSVVERKHQHILNVARALMFQSQVPLSLWGDC 743
Query: 2187 ILTATYIANRLPHSSLNWQTPFSVLYNRHPDYTLLKPFGCLAYATNLSPQKSKFAQRAHK 2366
+LTA ++ NR P L +TP+ +L P Y L+ FGCL Y++ Q+ KF R+
Sbjct: 744 VLTAVFLINRTPSQLLMNKTPYEILTGTAPVYEQLRTFGCLCYSSTSPKQRHKFQPRSRA 803
Query: 2367 CIFVGYVPGQKGYTLYDLESHSLHTSRDVLFVESCFPCXXXXXXXXXXXXXXXXXMDADS 2546
C+F+GY G KGY L DLES+++ SR+V F E FP +
Sbjct: 804 CLFLGYPSGYKGYKLMDLESNTVFISRNVQFHEEVFPLAKNPGSESSLKLFTPMVPVSSG 863
Query: 2547 FVXXXXXXXXXXXXXXXAEPQLRRSTRETRHPAWWEDFVTNVHDDLPSDTNXXXXXXXXX 2726
+ P S R + PA D+ N + SD
Sbjct: 864 IISDTTHSPSSLPSQISDLPPQISSQRVRKPPAHLNDYHCNT---MQSD---------HK 911
Query: 2727 XXXPNTFPYTSSSLFHHTYLSFLAKVDTIQEPKSYFQAKTNAKWVEAMNQELQALEHNHT 2906
+T Y+ S H Y++ + K+ P +Y +A+ +W EA++ E+ A+E +T
Sbjct: 912 YPISSTISYSKISPSHMCYINNITKIPI---PTNYAEAQDTKEWCEAVDAEIGAMEKTNT 968
Query: 2907 WILTDLP 2927
W +T LP
Sbjct: 969 WEITTLP 975
>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 443 bits (1139), Expect = e-134
Identities = 278/839 (33%), Positives = 430/839 (51%), Gaps = 33/839 (3%)
Frame = +3
Query: 60 HLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGKISAPDIASPMYEKWK 239
+L D+PG+ LVS TG NY++WSRSM IAL K K+ F++G + P P
Sbjct: 23 YLHPFDNPGALLVSKIFTGENYIAWSRSMSIALIVKNKIAFVDGSLVQPITNDPHLR--- 79
Query: 240 KVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGPLLFQLKKEISNLKQG 419
++W+ A +L E++ R+ +GP +F L+K +S++ Q
Sbjct: 80 ------VAWL----------------RANNL-EELKIRYLRSDGPRVFSLEKSLSSISQN 116
Query: 420 NSSVVVYFTKLKKLWDELSCLSPLPACSCGTS--------KLLSERDMNDRLMQFLMGLN 575
+ S+ YF++ K LWDE P+P+C CG K L++R +D +M+FL+GL+
Sbjct: 117 SKSITEYFSEFKALWDEYISYRPIPSCRCGNLNRCSCNILKDLTDRQQSDYVMKFLVGLH 176
Query: 576 DTYEHVRNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIADPLENSAMLSKLSNYPHNNT 755
D+Y +R+Q+L+ PLP++++ +S+ L E QRS+ A+ +++ AM+++ S+
Sbjct: 177 DSYSAIRSQLLLQSPLPSMSRVFSLLLQEESQRSLTNAVGISIDSQAMVAEQSSRT---- 232
Query: 756 YKSAANNSSGYRNKGTYRRTKEEKAKLRCDHCQVMGHEVSECFKLHGYPEWFKTFKEQKG 935
+ +N+ + KG K+ C HC GH V +CF+L GYP +K +G
Sbjct: 233 --VSTSNTQFTKQKG--------KSDAICSHCGYSGHLVDKCFQLIGYPP---RWKGPRG 279
Query: 936 KQSSANLVGSDNIR--PAANTEGKSTQMPDMSMMI--QQEIAKFLS--GKMMNNPTSPDP 1097
K ++ + N + P AN Q S MI Q++I L+ + N+ T+ +
Sbjct: 280 KIFNSTPTAAKNFQRLPTANNTNVLEQNSSNSNMIFSQEQIQNLLTLANSLSNSNTNFN- 338
Query: 1098 SVSFAHFADFAGKLTPLTTHYAMSTLENLDSNSWILDTGASRHMCATPSFISQITPLSSI 1277
+ ++ A +G + + + + + +WILD GA+ HM +P I +
Sbjct: 339 --AXSNVASISGN-----SFFYNTISSSKNQFTWILDIGATYHMIYSPLLFDSIVLPKTS 391
Query: 1278 ITVCLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSFKHNLLSISQLTQQSNLKCIFYPYH 1457
V LP+G T P+ TG + +P + L + L +PSF NL+S S+LT+ +++ F
Sbjct: 392 SKVHLPNGKTVPIIFTGSVKFSPDITLHNALYVPSFNINLVSASRLTKDNSIGLFFLQSK 451
Query: 1458 CVLQDLTS----GSGQVTWKALHITARTL*Y*FC*CQYS*QHQCIXXXXXXXXXXXXAQE 1625
C+LQDL+ G +V H+ Q +
Sbjct: 452 CILQDLSKWRMIGXAEVQSGLXHL------------------QQLSAQXNKEMXSSSIGL 493
Query: 1626 AWSCLPLSVATSSEFLK------PLCKPDVFKESQS---------CDIYHQSKQHRIVFP 1760
S L S +S+ P K + S S C I +KQ ++ FP
Sbjct: 494 PSSSLVESCTVNSDLWHFRLGHIPNAKIQLINSSDSSXKXIHNKVCXICPLAKQKKLPFP 553
Query: 1761 HSTIQSTSIFDLIHVDIWGLYKAECITNTPFLLNIVDDYSRATWTFLMTHKSQTLQLLKS 1940
S QS F L+H +IWG + + F L VDD++R TW FLM K++T +L +
Sbjct: 554 ISNSQSNKAFQLVHXBIWGPFSIPSYSXYXFFLTXVDDFTRFTWLFLMKTKTETXAILTN 613
Query: 1941 FFTMIHTQFNVKIKAIRSDNGSEFLSHDCQNFFQTCGVIHQKSCVYTPQQNGVVERRHRH 2120
F +HT FN I+ + SDNG EF + F+Q G+IHQ SCV TP QNG VER+H+H
Sbjct: 614 FLAYVHTHFNTNIQTLXSDNGQEF---NMPTFYQEHGIIHQLSCVETPXQNGRVERKHQH 670
Query: 2121 LLNIARALMFQSQVPHHLWPFSILTATYIANRLPHSSLNWQTPFSVLYNRHPDYTLLKPF 2300
LLN+AR+LMFQS++P W +LT T++ NR P S LN QTP+ +L+ + P+Y K F
Sbjct: 671 LLNVARSLMFQSKLPLSYWTDCVLTXTHLINRTPSSILNNQTPYQLLFQKPPNYNYFKXF 730
Query: 2301 GCLAYATNLSPQKSKFAQRAHKCIFVGYVPGQKGYTLYDLESHSLHTSRDVLFVESCFP 2477
GCL +A+ ++ + KF RA KCIF+GY P KGY + DL + SR+V+F ES FP
Sbjct: 731 GCLCFASTITNNRGKFQPRATKCIFLGYPPNIKGYKVLDLTTXKXFVSRNVJFHESTFP 789
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 446 bits (1147), Expect = e-133
Identities = 275/827 (33%), Positives = 422/827 (51%), Gaps = 19/827 (2%)
Frame = +3
Query: 54 PLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGKISAPDIASPMYEK 233
P L SD+PG+ + S L G+NY W+ ML AL AK K GFING I P P YE
Sbjct: 31 PYTLASSDNPGAVISSVELNGDNYNQWATEMLNALQAKRKTGFINGTIPRPPPNDPNYEN 90
Query: 234 WKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGPLLFQLKKEISNLK 413
W V+ M++ WI SI + + S A LW+D+ +RF N + Q++ ++S+ +
Sbjct: 91 WTAVNSMIVGWIRTSIEPKVKATVTFISDAHLLWKDLKQRFSVGNKVRIHQIRAQLSSCR 150
Query: 414 QGNSSVVVYFTKLKKLWDELSCLSPLPACSCG------TSKLLSERDMNDRLMQFLMGLN 575
Q +V+ Y+ +L LW+E + P+ C+CG TS+ ER+ +++ QF++GL+
Sbjct: 151 QDGQAVIEYYGRLSNLWEEYNIYKPVTVCTCGLCRCGATSEPTKERE-EEKIHQFVLGLD 209
Query: 576 DT-YEHVRNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIADPLENSA-MLSKLSNYPHN 749
++ + + ++ MDPLP++ + YS + E+QR + + + E + L++ H+
Sbjct: 210 ESRFGGLCATLINMDPLPSLGEIYSRVIR-EEQRLASVHVREQKEEAVGFLARREQLDHH 268
Query: 750 NTYKSAANNSSGYRNKGTYRRTKEEKAKLRCDHCQVMGHEVSECFKLHGYPEWFKTFKEQ 929
+ ++++ S + G R K ++ C +C GHE EC+++ G+P+W+
Sbjct: 269 SRVDASSSRSE---HTGGSRSNSIIKGRVTCSNCGRTGHEKKECWQIVGFPDWWSERNGG 325
Query: 930 KGK-------QSSANLVGSDNIRPAANTEGKSTQMPDMSMMIQQEIAKFLSGKMMNNPTS 1088
+G + S G + A T S+ P+ + + +++ + K + TS
Sbjct: 326 RGSNGRGRGGRGSNGGRGQGQVMAAHATSSNSSVFPEFTEEHMRVLSQLVKEKSNSGSTS 385
Query: 1089 PDPSVSFAHFADFAGKLTPLTTHYAMSTLENLDSNSWILDTGASRHMCATPSFISQITPL 1268
+ S D T L ILD+GAS HM T S ++ + P+
Sbjct: 386 NNNS-------DRLSGKTKL--------------GDIILDSGASHHMTGTLSSLTNVVPV 424
Query: 1269 SSIITVCLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSFKHNLLSISQLTQQSNLKCIFY 1448
V DGS G +TL+ T+ L +VL +PS L+S+S+L +Q+ F
Sbjct: 425 PPC-PVGFADGSKAFALSVGVLTLSNTVSLTNVLFVPSLNCTLISVSKLLKQTQCLATFT 483
Query: 1449 PYHCVLQDLTS----GSGQVTWKALHITARTL*Y*FC*CQYS*QHQCIXXXXXXXXXXXX 1616
C LQD +S GSG+ ++T T + +
Sbjct: 484 DTLCFLQDRSSKTLIGSGEERGGVYYLTDVTP------AKIHTANVDSDQALWHQRLGHP 537
Query: 1617 AQEAWSCLPLSVATSSEFLKPLCKPDVFKESQSCDIYHQSKQHRIVFPHSTIQSTSIFDL 1796
+ S LPL TSS S SCD+ ++KQ R VFP S ++ F L
Sbjct: 538 SFSVLSSLPLFSKTSSTVT-----------SHSCDVCFRAKQTREVFPESINKTEECFSL 586
Query: 1797 IHVDIWGLYKAECITNTPFLLNIVDDYSRATWTFLMTHKSQTLQLLKSFFTMIHTQFNVK 1976
IH D+WG Y+ + L IVDDYSRA WT+L+ KS+ Q+L +F QF
Sbjct: 587 IHCDVWGPYRVPASCGAVYFLTIVDDYSRAVWTYLLLEKSEVRQVLTNFLKYAEKQFGKT 646
Query: 1977 IKAIRSDNGSEFLSHDCQNFFQTCGVIHQKSCVYTPQQNGVVERRHRHLLNIARALMFQS 2156
+K +RSDNG+EF+ ++F+ G+IHQ SCV TPQQNG VER+HRH+LN+ARAL+FQ+
Sbjct: 647 VKMVRSDNGTEFMC--LSSYFRENGIIHQTSCVGTPQQNGRVERKHRHILNVARALLFQA 704
Query: 2157 QVPHHLWPFSILTATYIANRLPHSSLNWQTPFSVLYNRHPDYTLLKPFGCLAYATNLSPQ 2336
+P W SILTA Y+ NR P S L+ +TP+ VL+ P Y+ L+ FG Y ++
Sbjct: 705 SLPIKFWGESILTAAYLINRTPSSILSGRTPYEVLHGSKPVYSQLRVFGSACYVHRVTRD 764
Query: 2337 KSKFAQRAHKCIFVGYVPGQKGYTLYDLESHSLHTSRDVLFVESCFP 2477
K KF QR+ CIFVGY G+KG+ +YD+E + SRDV+F E FP
Sbjct: 765 KDKFGQRSRSCIFVGYPFGKKGWKVYDIERNEFLVSRDVIFREEVFP 811
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 263 bits (671), Expect(3) = e-132
Identities = 146/417 (35%), Positives = 222/417 (53%), Gaps = 8/417 (1%)
Frame = +3
Query: 1701 KESQSCDIYHQSKQHRIVFPHSTIQSTSIFDLIHVDIWGLYKAECITNTPFLLNIVDDYS 1880
K+S C + H +KQ ++ FP + S F+L+H+D+WG + E + + L IVDD+S
Sbjct: 596 KKSAYCHVCHLAKQKKLSFPSANNICNSTFELLHIDVWGPFSVETVEGYKYFLTIVDDHS 655
Query: 1881 RATWTFLMTHKSQTLQLLKSFFTMIHTQFNVKIKAIRSDNGSEFLSHDCQNFFQTCGVIH 2060
RATW +L+ KS L + +F ++ Q++ ++K++RSDN E + F++ G++
Sbjct: 656 RATWIYLLKSKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKELAFTE---FYKAKGIVS 712
Query: 2061 QKSCVYTPQQNGVVERRHRHLLNIARALMFQSQVPHHLWPFSILTATYIANRLPHSSLNW 2240
SC TP+QN VVER+H+H+LN+ARALMFQS + W +LTA ++ NR P + L+
Sbjct: 713 FHSCPETPEQNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSN 772
Query: 2241 QTPFSVLYNRHPDYTLLKPFGCLAYATNLSPQKSKFAQRAHKCIFVGYVPGQKGYTLYDL 2420
+TPF VL + PDY+ LK FGCL Y++ S Q+ KF R+ C+F+GY G KGY L DL
Sbjct: 773 KTPFEVLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDL 832
Query: 2421 ESHSLHTSRDVLFVESCFPCXXXXXXXXXXXXXXXXXMDADSFVXXXXXXXXXXXXXXXA 2600
ES+ +H SR+V F E FP +D F
Sbjct: 833 ESNVVHISRNVEFHEELFPLASSQQSATTA---------SDVFTPMDPLSSGNSITSHLP 883
Query: 2601 EPQLRRST-----RETRHPAWWED---FVTNVHDDLPSDTNXXXXXXXXXXXXPNTFPYT 2756
PQ+ ST R T+ PA +D + N D P ++ Y+
Sbjct: 884 SPQISPSTQISKRRITKFPAHLQDYHCYFVNKDDSHP---------------ISSSLSYS 928
Query: 2757 SSSLFHHTYLSFLAKVDTIQEPKSYFQAKTNAKWVEAMNQELQALEHNHTWILTDLP 2927
S H Y++ ++K+ P+SY +AK + +W A++QE+ A+E TW +T LP
Sbjct: 929 QISPSHMLYINNISKIPI---PQSYHEAKDSKEWCGAIDQEIGAMERTDTWEITSLP 982
Score = 229 bits (584), Expect(3) = e-132
Identities = 146/489 (29%), Positives = 236/489 (48%), Gaps = 12/489 (2%)
Frame = +3
Query: 54 PLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGKISAPDIASPMYEK 233
P L +DHPG +++S L Y WS +M I+L AK KLGF++G + P + P +
Sbjct: 65 PFFLHSADHPGLSIISHRLDETTYGDWSVAMRISLDAKNKLGFVDGSLPRPLESDPNFRL 124
Query: 234 WKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGPLLFQLKKEISNLK 413
W + + MV SW+LNS+S I + + + A D+W D+ +RF N P + L +EI +L+
Sbjct: 125 WSRCNSMVKSWLLNSVSPQIYRSILRLNDATDIWRDLFDRFNLTNLPRTYNLTQEIQDLR 184
Query: 414 QGNSSVVVYFTKLKKLWDELSCLSPL-PACSCGTSKLLSERDMNDRLMQFLMGLNDTYEH 590
QG S+ Y+T LK LWD+L L C+CG + L ++ ++M+FL GLN++Y
Sbjct: 185 QGTMSLSEYYTLLKTLWDQLDSTEALDDPCTCGKAVRLYQKAEKAKIMKFLAGLNESYAI 244
Query: 591 VRNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIADPLENSAMLSKLSNYPHNNTYKSAA 770
VR QI+ LP++ + Y + Q+ +A P + +S++S+ P +
Sbjct: 245 VRRQIIAKKALPSLAEVYHILDQDNSQKGFFNVVAPPA--AFQVSEVSHSPITSP----- 297
Query: 771 NNSSGYRNKGTYRRTKEEKAKLRCDHCQVMGHEVSECFKLHGYPEWFKTFKEQKGKQSSA 950
+ Y ++ K + C C +GH C+K HG+P F + K
Sbjct: 298 --------EIMYVQSGPNKGRPTCSFCNRVGHIAERCYKKHGFPPGFTPKGKSSDKPPKP 349
Query: 951 NLVGSD-NIRPAANTEGKSTQMPDMSMMIQQEIAKFLSGKMMNNPTSPDPSVSFAHFADF 1127
V + + P T T + S Q + S ++ SP + S H A
Sbjct: 350 QAVAAQVTLSPDKMTGQLETLAGNFSPDQIQNLIALFSSQLQPQIVSPQ-TASSQHEASS 408
Query: 1128 AGKLTPLTTHYAMSTL----------ENLDSNSWILDTGASRHMCATPSFISQITPLSSI 1277
+ + P ++ ST +L S++W++D+GA+ H+ + + Q S +
Sbjct: 409 SQSVAPSGILFSPSTYCFIGILAVSHNSLSSDTWVIDSGATHHV-SHDRKLFQTLDTSIV 467
Query: 1278 ITVCLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSFKHNLLSISQLTQQSNLKCIFYPYH 1457
V LP G ++ G + + + LQ+VL IP F+ NL+SIS LT + IF P
Sbjct: 468 SFVNLPTGPNVRISGVGTVLINKDIILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSC 527
Query: 1458 CVLQDLTSG 1484
C +QDLT G
Sbjct: 528 CQIQDLTKG 536
Score = 32.0 bits (71), Expect(3) = e-132
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +1
Query: 1474 LLVGVGKLHGRLYILQQGLSSTNSVDVSTPSNISVSHFLSCNLSFDLWHKRLGHAS 1641
L +G GK G LY+L T S +S + + VS +WHKRLGH S
Sbjct: 537 LTLGEGKRIGNLYVLD-----TQSPAISVNAVVDVS----------VWHKRLGHPS 577
>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1427
Score = 441 bits (1133), Expect = e-132
Identities = 309/981 (31%), Positives = 464/981 (47%), Gaps = 53/981 (5%)
Frame = +3
Query: 144 MLIALGAKTKLGFINGKISAPDIASPMYEKWKKVDCMVISWILNSISKDIVDAFIYASTA 323
M+ AL +K K F++G I P ++ +++ W + + M++SWI S+S+ I + IY + A
Sbjct: 1 MMRALLSKNKFKFVDGSIQEPQKSNELHDAWVRCNTMILSWITKSVSEQIAQSVIYINNA 60
Query: 324 RDLWEDIAERFGECNGPLLFQLKKEISNLKQGNSSVVVYFTKLKKLWDELSCLSPLPAC- 500
+ LWED+ ERF + + L +EI ++KQ + ++ YFT+LK LW+EL L P P C
Sbjct: 61 QRLWEDLKERFSKGDYFRFSDLLQEIHSIKQADRTISSYFTELKILWEELESLRPTPTCT 120
Query: 501 -----SCGTSKLLSERDMNDRLMQFLMGLNDTYEHVRNQILIMDPLPNINKAYSMFLTVE 665
SC S + + + ++ FL GLND Y V++QILIMDPLP INK +S+ L E
Sbjct: 121 CDVRCSCDLSTKVKDYKDTEYVICFLKGLNDQYNTVKSQILIMDPLPVINKVFSLVLQQE 180
Query: 666 KQRSVQLAIADPLENSAMLSKLSNYPHNNTYKSAANNSSGY-RNKG-TYRRTKEEKAKLR 839
+Q++ L +S + S N ++S++N G R +G T R A
Sbjct: 181 RQQNTP-----NLADSRIFSL--NTQSGGNWRSSSNGRGGSSRGRGRTGGRGSFTNAGKV 233
Query: 840 CDHCQVMGHEVSECFKLHGYPEWFKTFKEQKGKQSSANLVGSDNIRPAANTEGKSTQMPD 1019
C C H + C+ HG+P FK FK+ KG +S N + S A+ +
Sbjct: 234 CTFCGKENHTIDSCYFKHGFPPNFK-FKD-KGNTTSINTISSKAPSTQASEISRKQNKES 291
Query: 1020 MSMMIQQEIAKFLSGKMMNNPTSPDPSVSFAHFADFAGKLTPLTTHYAMSTLENLDSNS- 1196
S ++ + SP+ S++ +L TT ++S+ NL N
Sbjct: 292 TSNFTHEDYDHLIDMLKRAKLQSPEHSIN---------QLVHQTTTESVSS-SNLQQNQP 341
Query: 1197 --------WILDTGASRHMCATPSFISQITPLSSIITVCLPDGSTKPVTHTGHITLTPTL 1352
WILDTGA+ H+C + F ++ P+ + V LP+G+T +G I +
Sbjct: 342 GNPLEHTDWILDTGATDHVCNSLYFFTKYHPIDPV-HVKLPNGNTSTAQFSGTIIFSEKF 400
Query: 1353 KLQDVLIIPSFKHNLLSISQLTQQSNLKCIFYPYHCVLQDL----TSGSGQVTWKALHIT 1520
L DVL IP+F N++S+ ++ + + +F C++QDL T G +V L+I
Sbjct: 401 FLNDVLYIPNFHLNIISVQKIAASLDYELMFNKNSCIIQDLTSKKTIGLAEVK-NHLYIL 459
Query: 1521 ARTL*Y*FC*CQYS*QHQCIXXXXXXXXXXXXAQEAWSCLPL-------SVATSSEFLKP 1679
R + I + S L + +K
Sbjct: 460 QRPS-----------KDNSISACKSNSVLNAQPKGTTSSFDLWHYRLGHPSHVVLQTVKR 508
Query: 1680 LCKPDVFKESQSCDIYHQSKQHRIVFPHSTIQSTSIFDLIHVDIWGLYKAECITNTPFLL 1859
L + ++ +CD H KQ R+ FP ST +S S FDL+H+DIWG I + L
Sbjct: 509 LFPYVTYNKNITCDYCHFGKQARLPFPTSTTKSLSCFDLVHMDIWGPLAIPSIHGHKYFL 568
Query: 1860 NIVDDYSRATWTFLMTHKSQTLQLLKSFFTMIHTQFNVKIKAIRSDNGSEFLSHDCQNFF 2039
IVDDYSR TW + M K +T L+++F + + TQF IK +RSDNG EF +
Sbjct: 569 TIVDDYSRHTWIYFMKSKGETRNLIQNFISYVQTQFTKHIKVLRSDNGVEFAM---DQLY 625
Query: 2040 QTCGVIHQKSCVYTPQQNGVVERRHRHLLNIARALMFQSQVPHHLWPFSILTATYIANRL 2219
T G++HQ SCV TPQQN VVER+HRH+LNI R L+F S VP W +++ A ++ NRL
Sbjct: 626 ATYGIVHQTSCVETPQQNSVVERKHRHILNITRTLLFHSNVPKSFWCYAVGHAIHLINRL 685
Query: 2220 PHSSLNWQTPFSVLYNRHPDYTLLKPFGCLAYATNLSPQKSKFAQRAHKCIFVGYVPGQK 2399
P LN +P+ +LY++ P LK FG L YA+ L +SK A +A K +++G G K
Sbjct: 686 PSPVLNNSSPYQMLYDKPPTLLDLKVFGSLCYASTLVQGRSKLAPKATKGVYLGVKQGTK 745
Query: 2400 GYTLYDLESHSLHTSRDVLFVESCFP----------------------CXXXXXXXXXXX 2513
G+ + DL + S+ SR+V+F E FP
Sbjct: 746 GFLVLDLLTRSIFVSRNVVFYEHIFPFFEKGSTVITNSQQQNDACFDFLYLDSSSHPVTT 805
Query: 2514 XXXXXXMDADS--FVXXXXXXXXXXXXXXXAEPQLRR-STRETRHPAWWEDFVTNVHDDL 2684
+D DS + + P R STR PA+ +D+ N+ +
Sbjct: 806 IDNSSLLDIDSAHYENDLNDIDESAHPSETSSPSQLRKSTRHKCSPAYLKDYHCNLLIGV 865
Query: 2685 PSDTNXXXXXXXXXXXXPNTFPYTSSSLFHHTYLSFLAKVDTIQEPKSYFQAKTNAKWVE 2864
P + Y S S +Y ++ + T EP ++ QA N WVE
Sbjct: 866 PPPEDKHIRYPLN-----TVLSYDSLSA---SYSRYVLSITTHVEPHTFNQAVKNKVWVE 917
Query: 2865 AMNQELQALEHNHTWILTDLP 2927
AM EL ALEHN TW + LP
Sbjct: 918 AMQAELDALEHNKTWTIMPLP 938
>ref|XP_009128559.1| PREDICTED: uncharacterized protein LOC103853393 [Brassica rapa]
Length = 964
Score = 422 bits (1085), Expect = e-129
Identities = 283/864 (32%), Positives = 431/864 (49%), Gaps = 41/864 (4%)
Frame = +3
Query: 9 TGDTPSEIVEIKDGD---PLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLG 179
T TP+ + E+ P HL SD+PG +++S L G NY +WS +M IAL AK KL
Sbjct: 32 TSPTPTIVAELSPDSIHSPFHLTNSDNPGLSIISEVLDGTNYDNWSIAMKIALDAKNKLV 91
Query: 180 FINGKISAPDIASPMYEKWKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFG 359
FI+G + P + P W + + MV SWILN++SK I + + + A ++W+D+ RF
Sbjct: 92 FIDGSVPRPLESHPHSRIWSRCNSMVKSWILNTVSKQIYKSILRFNDAVEIWKDLETRFH 151
Query: 360 ECNGPLLFQLKKEISNLKQGNSSVVVYFTKLKKLWDEL---SCLSPLPACSCGTSKLLSE 530
N P +QL ++I L+QG+ + Y+T LK LWDEL SC+ C+C K +
Sbjct: 152 ITNLPRSYQLSQQIWALQQGSMDLATYYTALKTLWDELDGASCVDTCRHCTC--CKAIDT 209
Query: 531 RDMNDRLMQFLMGLNDTYEHVRNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIADPLEN 710
+ + R+++FL GLN++Y +R+QI++ +P + + Y++ QR++ P+ N
Sbjct: 210 KADHARVIKFLAGLNESYSVIRSQIIMKKNVPELFEIYNLLDQDFNQRNI-----IPVMN 264
Query: 711 SAMLSKLSNYPHNNTYKSAANNSSGYRNKGTYRRTKEEKAKLRCDHCQVMGHEVSECFKL 890
+ L P +T +S N Y ++ KL C HC GH V C+K+
Sbjct: 265 ATAFQVL--IPDQSTVQSMP-----LLNAAQYTAPAKQH-KLTCAHCGYNGHTVDTCYKI 316
Query: 891 HGYPEWFKTFKEQKGKQSSANLVGSDNIRPAANTEGKSTQMPD-MSMMIQQEIAKFLSGK 1067
HGYP FK K +K S++ +N +P G + + ++ + + +I ++
Sbjct: 317 HGYPVGFK-HKGKKQTDKSSSTPKYNNAKPVVAQVGFVDSVSNIVNNLTKDQIEGVIA-- 373
Query: 1068 MMNNPTSPDPSVSFAHFADFAGKLTPLT-THYAMSTL----------ENLDSNSWILDTG 1214
N+ P + + G +T L ++ STL L + +WI+D+G
Sbjct: 374 YFNSQLKMQPIQANCVASTSGGMITALPGMAFSSSTLCFVGMLKATSNALCTKTWIIDSG 433
Query: 1215 ASRHMCATPSFISQITPLSSIITVCLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSFKHN 1394
A+ H+ +T S +V LP G + G I LT +L L++VL + F+ N
Sbjct: 434 ATHHVAHDRDLFLDLTD-SISTSVTLPTGLGIKIAGIGSIRLTDSLILRNVLYLSDFRLN 492
Query: 1395 LLSISQLTQQSNLKCIFYPYHCVLQDLTSG---------SGQVTWKALHITARTL*Y*FC 1547
LLS+SQLT+ + +F P C +QD T G A+ IT +
Sbjct: 493 LLSVSQLTKDLGYRVMFDPGACFIQDPTKGLMIGRGEQICNLYVLDAVDITGSSF----- 547
Query: 1548 *CQYS*QHQCIXXXXXXXXXXXXAQEAWSCLPLSVATS--------SEFLKPLCKPDVF- 1700
Q++ SC + V S K DVF
Sbjct: 548 ----------------------IQQQSASCSSVVVDVSLWHNRLGHPSMSKTENIVDVFG 585
Query: 1701 -----KESQSCDIYHQSKQHRIVFPHSTIQSTSIFDLIHVDIWGLYKAECITNTPFLLNI 1865
KE C I +KQ R+ + S ++FDL+H+DIWG + L I
Sbjct: 586 FKHINKEPFHCAICPLAKQKRLPYNPQNNMSQNVFDLLHIDIWGPFSVSTAEGYKHFLTI 645
Query: 1866 VDDYSRATWTFLMTHKSQTLQLLKSFFTMIHTQFNVKIKAIRSDNGSEFLSHDCQNFFQT 2045
VDD++R W +L+ K++ L + F MI T++ K+KA+RSDN E D F++
Sbjct: 646 VDDHTRVIWIYLLRTKNEVLTVFPDFIQMIETKYKSKVKAVRSDNAPELKFVD---FYKK 702
Query: 2046 CGVIHQKSCVYTPQQNGVVERRHRHLLNIARALMFQSQVPHHLWPFSILTATYIANRLPH 2225
G++ SC TP+QN VVER+H+ +LN+ARALMFQS VP LW +LTA +I NRLP
Sbjct: 703 KGIVSYHSCPETPKQNSVVERKHQLILNVARALMFQSHVPLELWGDCVLTAVFIINRLPT 762
Query: 2226 SSLNWQTPFSVLYNRHPDYTLLKPFGCLAYATNLSPQKSKFAQRAHKCIFVGYVPGQKGY 2405
L ++PF VL ++ DY K FGCLAY + + + KF R+ CIF+GY G KGY
Sbjct: 763 PLLKDKSPFEVLTSKRVDYGGFKVFGCLAYYSTSTKNRHKFQPRSKPCIFLGYPAGYKGY 822
Query: 2406 TLYDLESHSLHTSRDVLFVESCFP 2477
L DL+++S+H SR+V F E+ FP
Sbjct: 823 KLLDLDTNSIHISRNVTFHEAIFP 846
>gb|KYP42296.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 849
Score = 417 bits (1073), Expect = e-128
Identities = 262/760 (34%), Positives = 395/760 (51%), Gaps = 18/760 (2%)
Frame = +3
Query: 252 MVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGPLLFQLKKEISNLKQGNSSV 431
MV+SW+++S+S I + ++ A D+W+D+ R+ + + + L++E+++++QG++++
Sbjct: 3 MVVSWLVHSVSILIRQSILWMDNAIDIWKDLKVRYSQGDLLRISDLQQELASIRQGDANI 62
Query: 432 VVYFTKLKKLWDELSCLSPLPACSCGTSKLLSE------RDMNDRLMQFLMGLNDTYEHV 593
YFTKL+ +WDEL P P C+C L + R M DR+MQFL GLND Y +V
Sbjct: 63 TDYFTKLRMIWDELESYRPDPFCTCDVKCLCNALTEVMLRKMQDRIMQFLRGLNDQYHNV 122
Query: 594 RNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIADPLENSAMLSKLSNYPHNNTYKSAAN 773
R+ IL+MDPLP+I K +S + E+Q NS ++ L+ ++ S N
Sbjct: 123 RSNILMMDPLPSIAKVFSYVVQQERQ----------FTNSDIVGNLNVINAASSLSSRTN 172
Query: 774 NSSGYRNKGTYRRTKEEKAKLRCDHCQVMGHEVSECFKLHGYPEWFKTFKEQKGKQSSAN 953
S G T K+ C HC GH V EC+K HGYP + K + N
Sbjct: 173 YSWG---------TAGRSGKV-CTHCGFNGHTVEECYKKHGYPPGHRLHKTSGAHIN--N 220
Query: 954 LVGSDNIRPAANTEGKS-TQMPDMSMMIQQEIAKFLSGKMMNNPTSPDPSVSFAHFADFA 1130
V +N N + K Q DM + QQ + N TS + S +
Sbjct: 221 TVRDENNPQEGNDKVKQENQNQDMRLTPQQYQTLMSLLQQHNGGTSTNAS-----HINQI 275
Query: 1131 GKLTPLTTHYAMSTLENLDSNSWILDTGASRHMCATPSFISQITPLSSIITVCLPDGSTK 1310
G + LT + + +SN WILD+GA+ H+ ++ S ++ ++ V LP G
Sbjct: 276 GNIFSLTCN-----MNKNNSNFWILDSGATDHVTSSLHLYSTFKKINPVV-VSLPTGQQV 329
Query: 1311 PVTHTGHITLTPTLKLQDVLIIPSFKHNLLSISQLTQQSNLKCIFYPYHCVLQDLTSGSG 1490
TH+G + T L+DVL +PSF NL+SIS L + IF HC++QD+T+
Sbjct: 330 IATHSGVVKFTKYFYLEDVLFLPSFSFNLISISNLVSSLKFQLIFSNDHCLIQDVTNQRM 389
Query: 1491 QVTWKALHITARTL*Y*FC*CQYS*QHQCIXXXXXXXXXXXXAQEAWSC--LPLSV---- 1652
T + Y + + +SC +P+ +
Sbjct: 390 IGTVDVVDGL------------YKLKMPVAKSNTHSNNVSPNVKSVFSCNKIPIDLWHFR 437
Query: 1653 --ATSSEFLKPL--CKPDVFKESQS-CDIYHQSKQHRIVFPHSTIQSTSIFDLIHVDIWG 1817
S + L+ L C P ++ + CD H++KQ ++ FP S ++S F LIHVDIWG
Sbjct: 438 LGHPSHDRLQLLKQCYPTLYSDKNFVCDTCHKAKQRKLSFPQSESYASSPFSLIHVDIWG 497
Query: 1818 LYKAECITNTPFLLNIVDDYSRATWTFLMTHKSQTLQLLKSFFTMIHTQFNVKIKAIRSD 1997
+ + L IVDD++R WTF M K++T LKSF + + QF+ K++AIRSD
Sbjct: 498 PCATTSLNGHKYFLTIVDDHTRFAWTFPMLSKAETQTHLKSFISFVERQFDTKVRAIRSD 557
Query: 1998 NGSEFLSHDCQNFFQTCGVIHQKSCVYTPQQNGVVERRHRHLLNIARALMFQSQVPHHLW 2177
NG+EF+ +FFQT G++HQ SCV TPQQNGVVER+H+HLLN+ RAL+FQS +P W
Sbjct: 558 NGAEFIM---THFFQTTGIVHQTSCVETPQQNGVVERKHQHLLNVTRALLFQSNLPPIFW 614
Query: 2178 PFSILTATYIANRLPHSSLNWQTPFSVLYNRHPDYTLLKPFGCLAYATNLSPQKSKFAQR 2357
F++ A + N +P LN +PF LY++ + LLK FGCL Y + L + K R
Sbjct: 615 CFALTHAVLLINCMPTPFLNNLSPFQKLYHKPYNLDLLKVFGCLCYMSTLVNNRKKLDPR 674
Query: 2358 AHKCIFVGYVPGQKGYTLYDLESHSLHTSRDVLFVESCFP 2477
A IF+G+ KGY ++L+S + SR+V+F E CFP
Sbjct: 675 ATPSIFLGFKQHTKGYITFNLQSRDVSISRNVVFYEDCFP 714
>ref|XP_010251928.1| PREDICTED: uncharacterized protein LOC104593656 [Nelumbo nucifera]
Length = 537
Score = 405 bits (1041), Expect = e-127
Identities = 212/461 (45%), Positives = 295/461 (63%), Gaps = 11/461 (2%)
Frame = +3
Query: 39 IKDGDPLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGKISAPDIAS 218
+ +GDPL L SDHPG LV+ PLT N+L WSRS+ IALGAK KLG I+G P+ S
Sbjct: 27 VNNGDPLFLHNSDHPGMALVTAPLTSKNFLVWSRSVKIALGAKMKLGLIDGSYKVPEKDS 86
Query: 219 PMYEKWKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGPLLFQLKKE 398
P+Y++W +V+CMV SWILNSISKD+V+AF+Y S AR+LW ++ ER+GE NGPLL+Q+++E
Sbjct: 87 PIYDQWNRVNCMVTSWILNSISKDLVEAFLYTSNARELWCELEERYGESNGPLLYQIQRE 146
Query: 399 ISNLKQGNSSVVVYFTKLKKLWDELSCLSPLPACSCGTSKLLSERDMNDRLMQFLMGLND 578
IS++ QG +V Y+T+LKKLWDEL+ L P+P C+CG++K +++ + LMQFLMGLND
Sbjct: 147 ISSITQGTMTVTQYYTRLKKLWDELTVLMPIPECTCGSAKAVADLTSFNHLMQFLMGLND 206
Query: 579 TYEHVRNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIADPLENSAMLSKLSNYPHNNTY 758
Y+H RNQIL+MDPLP++NKAYSM VEK V+++ +P EN+ ML + + P
Sbjct: 207 IYDHNRNQILLMDPLPSVNKAYSMITRVEKHMEVKVSYVEPNENATMLCR-TQMPR---- 261
Query: 759 KSAANNSSGYRNKGTYRRTKEEKAKLRCDHCQVMGHEVSECFKLHGYPEWFKTFKEQKGK 938
K N N T TKEEK + C HC GH CFKL GY +W+K ++QK K
Sbjct: 262 KDGGNKG----NTKTNEVTKEEKKQQYCTHCNTNGHLKESCFKLIGYLDWYKQLRDQKRK 317
Query: 939 QS----------SANLVGSDNIRPAANTEGKS-TQMPDMSMMIQQEIAKFLSGKMMNNPT 1085
+S + NLV + + T GK Q ++ +IQQE+ K + GK+ P
Sbjct: 318 KSGTRNEIGGKYATNLVDTPLEVNSETTAGKGLDQNAGLANLIQQELIKLMKGKI---PA 374
Query: 1086 SPDPSVSFAHFADFAGKLTPLTTHYAMSTLENLDSNSWILDTGASRHMCATPSFISQITP 1265
+ + V+FAH DFAG + L ++A++T++ S +WI+DTG S HMC S I + T
Sbjct: 375 AAN-MVNFAHLEDFAGTVLNLELNFALNTVDLFRSGTWIVDTGVSNHMCTDISLIHKPTV 433
Query: 1266 LSSIITVCLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSFK 1388
+S + + L DG+ V HTG + LTP + L +VL FK
Sbjct: 434 VSHMTLLYLSDGTVNLVKHTGTVQLTPRICLTNVLHESCFK 474
>emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera]
Length = 1472
Score = 426 bits (1095), Expect = e-126
Identities = 287/844 (34%), Positives = 418/844 (49%), Gaps = 35/844 (4%)
Frame = +3
Query: 51 DPLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGKISAP--DIASPM 224
+P SDHPG L+S L G+NY +W R+M++AL +K KLGF+NG I P +I
Sbjct: 17 NPYFTHHSDHPGLVLISKSLNGDNYSAWKRAMILALNSKNKLGFVNGSIKTPSEEIDPKG 76
Query: 225 YEKWKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGPLLFQLKKEIS 404
Y W + + V SWI+N+++ +I ++ IY S A+ L+
Sbjct: 77 YATWSRCNDTVHSWIVNTLNPEIANSVIYYSIAQQLF----------------------- 113
Query: 405 NLKQGNSSVVVYFTKLKKLWDELSCLSPLPACSCGTSKLLSERDMNDRLMQFLMGLNDTY 584
+ Y+TKLK LWDEL+ + A + G +++D +LMQFLMGLN++Y
Sbjct: 114 --------ISAYYTKLKGLWDELASYN---AAAYG-----AQQDQQ-KLMQFLMGLNESY 156
Query: 585 EHVRNQILIMDPLPNINKAYSMFLTVEKQRS-VQLAIADPLENSAMLSKLSNYPHNNTYK 761
+R QIL+M+PLP++++AYS EKQR + A SA ++ SN + T+K
Sbjct: 157 SAIRGQILLMNPLPSVHQAYSSVSQEEKQRLLISTNAAAESAASAAMAVRSNGKSSATWK 216
Query: 762 SAANNSSGYRNKGT---------------------------YRRTKEEKAKLRCDHCQVM 860
+ S+ R + T RR + + +C +C M
Sbjct: 217 DGIDRSNTERMEPTDRPFGSQNFRVNRSSQGQDGRPFFDQDRRRMGSGRGRPQCSYCGDM 276
Query: 861 GHEVSECFKLHGYPEWFKTFKEQKGKQSSANLVGSDNIRPAANTEGKSTQMPDMSMMIQQ 1040
GH V +CF+LHGYP + G S+ N S + + EGKS + +
Sbjct: 277 GHWVQKCFQLHGYPPGHPKARMNLGSNSNRNKSFSAANQVSEADEGKSAVA-----LSET 331
Query: 1041 EIAKFLSGKMMNNPTSPDPSVSFAHFADFAGKLTPLTTHYAMSTLENLDSNSWILDTGAS 1220
++ + LS ++NN S K+ +T L + +WI+D+GA+
Sbjct: 332 QLKQLLS--LLNNQDENSSS-----------KVNAVTK----PGLSKVAFRNWIIDSGAT 374
Query: 1221 RHMCATPSFISQITPLSSIITVCLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSFKHNLL 1400
H+ ++ + + S+ V LP G + + L L DVL + +FK +L+
Sbjct: 375 DHITSSSKLLHK-DKNCSLPPVLLPSGEKANIVTKWTLPLNSVYYLHDVLFVLTFKVDLI 433
Query: 1401 SISQLTQQSNLKCIFYPYHCVLQDL----TSGSGQVTWKALHITARTL*Y*FC*CQYS*Q 1568
+S+LT+ N F+PY C+LQ+L T G G+ ++ A + S
Sbjct: 434 LVSRLTRGLNCSMTFFPYWCILQNLATRRTIGLGKQRDGLYYLVALAT-------EKSLT 486
Query: 1569 HQCIXXXXXXXXXXXXAQEAWSCLPLSVATSS-EFLKPLCKPDVFKESQSCDIYHQSKQH 1745
+ + + W V+ S F+ + + +C I +KQ
Sbjct: 487 NHSSSTNQPACNLAISSTDLWHSRLGHVSPSRLSFIAKNFLNFSVQSNNACPICPLAKQS 546
Query: 1746 RIVFPHSTIQSTSIFDLIHVDIWGLYKAECITNTPFLLNIVDDYSRATWTFLMTHKSQTL 1925
R+ F S I ST F++IH IWG Y+ + + L IVDDY+R TW FLM HK +
Sbjct: 547 RLPFGTSAISSTKPFEIIHCHIWGRYQHPSLFGAHYFLTIVDDYTRFTWIFLMRHKDEAQ 606
Query: 1926 QLLKSFFTMIHTQFNVKIKAIRSDNGSEFLSHDCQNFFQTCGVIHQKSCVYTPQQNGVVE 2105
LLK FF+ + TQF IK R+DNG EF S +FFQ GVI Q S VYTPQQNGVVE
Sbjct: 607 SLLKRFFSYVFTQFEFCIKTFRNDNGREFTS--LHSFFQDNGVIFQHSYVYTPQQNGVVE 664
Query: 2106 RRHRHLLNIARALMFQSQVPHHLWPFSILTATYIANRLPHSSLNWQTPFSVLYNRHPDYT 2285
R+HRH+L + RAL F +QVP W LTA +I N LP L+++TPF +LY++ P Y+
Sbjct: 665 RKHRHILQVTRALKFHAQVPTQFWGECALTAVHIINWLPSPVLSFKTPFELLYSKPPSYS 724
Query: 2286 LLKPFGCLAYATNLSPQKSKFAQRAHKCIFVGYVPGQKGYTLYDLESHSLHTSRDVLFVE 2465
L FGCLAYATN+ KF RA IF+GY GQK Y L+DL + + TSRDV F E
Sbjct: 725 YLHVFGCLAYATNVH-TSHKFDYRAMSSIFIGYPVGQKAYKLFDLSTKKVFTSRDVKFHE 783
Query: 2466 SCFP 2477
FP
Sbjct: 784 DIFP 787
>ref|XP_015575166.1| PREDICTED: uncharacterized protein LOC107261307 [Ricinus communis]
Length = 608
Score = 402 bits (1033), Expect = e-125
Identities = 214/507 (42%), Positives = 305/507 (60%), Gaps = 8/507 (1%)
Frame = +3
Query: 15 DTPSEIVEIKDGDPLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGK 194
D+ + +GDP LQGSDHPG LV+ PLTG N+L+WSRSM IALGAK KLGF+NGK
Sbjct: 3 DSDNPTNRTSNGDPFLLQGSDHPGMVLVTAPLTGINFLTWSRSMKIALGAKMKLGFVNGK 62
Query: 195 ISAPDIASPMYEKWKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGP 374
I PD S +E W +V+CM +LW++IAER+GE NGP
Sbjct: 63 IPIPDEESLEFETWTRVNCM------------------------ELWDEIAERYGESNGP 98
Query: 375 LLFQLKKEISNLKQGNSSVVVYFTKLKKLWDELSCLSPLPACSCGTSKLLSERDMNDRLM 554
LL+QL++EIS++ QGN SV Y+T+LK+LWDE +CL PLPAC CG SK +S+ +RLM
Sbjct: 99 LLYQLQREISSVSQGNESVSTYYTRLKRLWDEFACLLPLPACFCGASKAVSDLHSMNRLM 158
Query: 555 QFLMGLNDTYEHVRNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIADPLENSAMLSKLS 734
QFLMGLND Y + +NQIL+M+PLP++N+AYSM L+VEKQ+ V + + +E + ++ K
Sbjct: 159 QFLMGLNDCYNNTKNQILVMEPLPSVNRAYSMMLSVEKQKEVHINFNEHIEGTGLMVK-- 216
Query: 735 NYPHNNTYKSAANNSSGYRNKGTYRR--TKEEKAKLRCDHCQVMGHEVSECFKLHGYPEW 908
++ K + + +K++K K +C+HC+ GH CFKLHGYP+W
Sbjct: 217 -------------TQGSFQEKPFFSKVLSKKDKEKQQCEHCKQKGHLKESCFKLHGYPDW 263
Query: 909 FKTFKEQKGK---QSSANLVGSD-NIRPAANTEGKSTQMPDMSMMIQQEIAKFLSGKMMN 1076
FK K+Q+ K +++ N+V S + EGK + D+++++QQEI + + GK++
Sbjct: 264 FKELKDQQKKGILKATTNMVDSPLDYDSEGKEEGKKNRQDDIAILVQQEIQRLMKGKVLT 323
Query: 1077 NPTSPDPSVSFAHFADFAGKLTPL--TTHYAMSTLENLDSNSWILDTGASRHMCATPSFI 1250
++ A +AGK + L A ST ++ +WILDTGA+ HM T F
Sbjct: 324 EGN----FMNLAMMDGYAGKDSQLKFPLSVASSTANLSETGAWILDTGATNHMIGTKFFF 379
Query: 1251 SQITPLSSIITVCLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSFKHNLLSISQLTQQSN 1430
+ P V LPDG+ + + G+I L + L DVL IPSFK NL+S+ +L + +
Sbjct: 380 KHLKPPHRPTPVFLPDGTIRYIDSIGNINLENKITLNDVLYIPSFKFNLISVHKLAKTAQ 439
Query: 1431 LKCIFYPYHCVLQDLTSGSGQVTWKAL 1511
L+CIF P C LQDL + + T KAL
Sbjct: 440 LECIFTPTDCTLQDLQTKTILATGKAL 466
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 422 bits (1086), Expect = e-125
Identities = 266/827 (32%), Positives = 413/827 (49%), Gaps = 19/827 (2%)
Frame = +3
Query: 54 PLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGKISAPDIASPMYEK 233
P L SD+PG+ + S LTG+NY WS ML AL AK K GFING IS P + +P YE
Sbjct: 26 PYTLASSDNPGAMISSVMLTGDNYNEWSTKMLNALQAKRKTGFINGSISKPPLDNPDYEN 85
Query: 234 WKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGPLLFQLKKEISNLK 413
W+ V+ M++ WI SI + + A LW ++ +RF N + Q+K +++ +
Sbjct: 86 WQAVNSMIVGWIRASIEPKVKSTVTFICDAHQLWSELKQRFSVGNKVHVHQIKTQLAACR 145
Query: 414 QGNSSVVVYFTKLKKLWDELSCLSPLPACSCG------TSKLLSERDMNDRLMQFLMGLN 575
Q V+ Y+ +L KLW+E P+ C CG T + ER+ +++ QF++GL+
Sbjct: 146 QDGQPVIDYYGRLCKLWEEFQIYKPITVCKCGLCTCGATLEPSKERE-EEKIHQFVLGLD 204
Query: 576 DT-YEHVRNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIADPLENS-AMLSKLSNYPHN 749
D+ + + ++ MDP P++ + YS + E+QR + I + +++ L++ S +
Sbjct: 205 DSRFGGLSATLIAMDPFPSLGEIYSRVVR-EEQRLASVQIREQQQSAIGFLTRQSEVTAD 263
Query: 750 NTYKSAANNSSGYRNKGTYRRTKEEKAKLRCDHCQVMGHEVSECFKLHGYPEWFKTFKEQ 929
S+ K + C HC GHE +C+++ G+P+W+
Sbjct: 264 GRTDSSI--------------IKSRDRSVLCSHCGRSGHEKKDCWQIVGFPDWWTERTNG 309
Query: 930 KGKQSSANLVGSDNIRPAANTEGKSTQMPDMSMMIQQEIAKFLSGKMMNNPTSPDPSVSF 1109
G+ SS+ G +N G+ + + + SP P +
Sbjct: 310 GGRGSSSR--GRGGRSSGSNNSGRGR-------------GQVTAAHATTSNLSPFPEFT- 353
Query: 1110 AHFADFAGKLTPLTTHYAMSTLENLDSN----SWILDTGASRHMCATPSFISQITPLSSI 1277
D +T + + T + L ILDTGAS HM S ++ I + S
Sbjct: 354 ---PDQLRVITQMIQNKNNGTSDKLSGKMKLGDVILDTGASHHMTGQLSLLTNIVTIPSC 410
Query: 1278 ITVCLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSFKHNLLSISQLTQQSNLKCIFYPYH 1457
+V DG G L+ T+ L +VL +P+ +L+S+S+L +Q +F
Sbjct: 411 -SVGFADGRKTFAISMGTFKLSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTI 469
Query: 1458 CVLQDLTS----GSGQVTWKALHIT---ARTL*Y*FC*CQYS*QHQCIXXXXXXXXXXXX 1616
CVLQD S G+G+ ++T T+ ++ HQ +
Sbjct: 470 CVLQDRFSRTLIGTGEERDGVYYLTDAATTTVHKVDITTDHALWHQRLGHPSF------- 522
Query: 1617 AQEAWSCLPLSVATSSEFLKPLCKPDVFKESQSCDIYHQSKQHRIVFPHSTIQSTSIFDL 1796
S LPL +S S+SCD+ ++KQ R VFP S+ +ST F L
Sbjct: 523 --SVLSSLPLFSGSSCSV-----------SSRSCDVCFRAKQTREVFPDSSNKSTDCFSL 569
Query: 1797 IHVDIWGLYKAECITNTPFLLNIVDDYSRATWTFLMTHKSQTLQLLKSFFTMIHTQFNVK 1976
IH D+WG Y+ + L IVDD+SR+ WT+L+ KS+ +L +F QF
Sbjct: 570 IHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKS 629
Query: 1977 IKAIRSDNGSEFLSHDCQNFFQTCGVIHQKSCVYTPQQNGVVERRHRHLLNIARALMFQS 2156
+K IRSDNG+EF+ ++F+ G++HQ SCV TPQQNG VER+HRH+LN++RAL+FQ+
Sbjct: 630 VKIIRSDNGTEFMC--LSSYFKEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRALLFQA 687
Query: 2157 QVPHHLWPFSILTATYIANRLPHSSLNWQTPFSVLYNRHPDYTLLKPFGCLAYATNLSPQ 2336
+P W +++TA Y+ NR P S N +P+ +L+ PDY L+ FG YA ++
Sbjct: 688 SLPIKFWGEAVMTAAYLINRTPSSIHNGLSPYELLHGCKPDYDQLRVFGSACYAHRVTRD 747
Query: 2337 KSKFAQRAHKCIFVGYVPGQKGYTLYDLESHSLHTSRDVLFVESCFP 2477
K KF +R+ CIFVGY GQKG+ +YDL ++ SRDV+F E+ FP
Sbjct: 748 KDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVVFRENVFP 794
>gb|KYP40816.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1298
Score = 231 bits (590), Expect(3) = e-124
Identities = 113/254 (44%), Positives = 162/254 (63%)
Frame = +3
Query: 1716 CDIYHQSKQHRIVFPHSTIQSTSIFDLIHVDIWGLYKAECITNTPFLLNIVDDYSRATWT 1895
CD H +KQ ++ FP S + S FDLIH+DIWG I + L IVDD+SR TW
Sbjct: 570 CDYCHLAKQCKLSFPISINSTASCFDLIHMDIWGPLSICSIHGHKYFLTIVDDFSRNTWV 629
Query: 1896 FLMTHKSQTLQLLKSFFTMIHTQFNVKIKAIRSDNGSEFLSHDCQNFFQTCGVIHQKSCV 2075
FLM KS+T L+++F ++ TQ+ K+K IRSDNG EF D F+ + G+IHQ SCV
Sbjct: 630 FLMKAKSETRTLIQNFISLTFTQYKKKVKIIRSDNGIEFRMPD---FYNSQGIIHQTSCV 686
Query: 2076 YTPQQNGVVERRHRHLLNIARALMFQSQVPHHLWPFSILTATYIANRLPHSSLNWQTPFS 2255
TPQQN V ER+HRH+LN+AR+L+F S +P+ W +++L A ++ N+LP + L ++PF
Sbjct: 687 ETPQQNAVAERKHRHILNVARSLLFHSNLPNVYWSYAVLHAIHLINKLPTAVLKGKSPFE 746
Query: 2256 VLYNRHPDYTLLKPFGCLAYATNLSPQKSKFAQRAHKCIFVGYVPGQKGYTLYDLESHSL 2435
+L + P Y LK FG L + + L+ ++K RA KC+++G G KGY DL + +
Sbjct: 747 ILNKKTPAYLDLKVFGSLCFVSTLTQHRNKLDPRAKKCVYLGIKVGTKGYIALDLTTREI 806
Query: 2436 HTSRDVLFVESCFP 2477
SR+V+F E+ FP
Sbjct: 807 LISRNVIFYENIFP 820
Score = 225 bits (573), Expect(3) = e-124
Identities = 153/501 (30%), Positives = 244/501 (48%), Gaps = 23/501 (4%)
Frame = +3
Query: 39 IKDGD-------PLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGKI 197
IK GD P +L ++ + VS L G NY SWS+ M L ++ K F++G I
Sbjct: 13 IKKGDESQNPNSPYYLHPGENINTLTVSPVLDGPNYHSWSKLMKRGLQSRNKYKFVDGTI 72
Query: 198 SAPDIASPMYEKWKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGPL 377
P +++ W + + MVISWI S+S I + +Y A DLW+D+ +RF + +
Sbjct: 73 KEPPANDFLHDVWIRCNTMVISWITRSVSLQIAQSIVYIDNAEDLWKDLRDRFSKGDHFR 132
Query: 378 LFQLKKEISNLKQGNSSVVVYFTKLKKLWDELSCLSPLPACSCGTS------KLLSERDM 539
+ L +EI ++KQG ++ Y T LK LW+EL L P+PACSC K +
Sbjct: 133 MSDLLQEIHSIKQGERTISTYHTDLKTLWEELEILRPIPACSCTVKCTCDLVKTVRNYKE 192
Query: 540 NDRLMQFLMGLNDTYEHVRNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIADPLENSAM 719
+ ++ FL GLND+Y VR+Q+L+MDPLPNINK +S+ L E+Q + + L+ +
Sbjct: 193 TEYVICFLKGLNDSYNTVRSQVLMMDPLPNINKVFSLVLQQERQ-----VLGNLLQEVNL 247
Query: 720 LSKLSNYPHNNTYKSAANNSSGYRNKGTY-RRTKEEKAKLRCDHCQVMGHEVSECFKLHG 896
++ ++N N N SS R +G + +R + + C C H V C+ HG
Sbjct: 248 VASITN---NKQSFGGRNGSSSGRGRGRFNQRNFSNQPQKICTFCGKERHTVETCYFKHG 304
Query: 897 YPEWFKTFKEQKGKQSSANLVGSDNIRPAANTEGK-----STQMPDMSMMIQQE----IA 1049
+P F FK+ K + S+ N SD+ EG + ++S I E +
Sbjct: 305 FPPNF-NFKD-KRQTSTVNSYTSDSSTSPNTVEGSDHKITGKEYTEVSSTITTEQYNQLM 362
Query: 1050 KFLSGKMMNNPTSPDPSVSFAHFADFAGKLTPLTTHYAMSTLENLDSNSWILDTGASRHM 1229
+ L G ++ T + + G + L+T + L N WILD+GA+ H+
Sbjct: 363 EILKGSNVSGETH-----AVDNLQQHPGNI--LSTQKE----QKLPDNVWILDSGATDHV 411
Query: 1230 CATPSFISQITPLSSIITVCLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSFKHNLLSIS 1409
+ S + I + LP+G +G + + LQDVL IP F +N++S+
Sbjct: 412 SNSLSCYDSYNTIEP-IRIKLPNGFITQTQISGTVAFSGRFFLQDVLYIPDFNYNIISVG 470
Query: 1410 QLTQQSNLKCIFYPYHCVLQD 1472
++ + N K +F C +QD
Sbjct: 471 KIVKNFNCKIVFDKLCCYIQD 491
Score = 42.0 bits (97), Expect(3) = e-124
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +1
Query: 1474 LLVGVGKLHGRLYILQQGLSS----TNSVDVSTPSNISVSHFLSCNLSFDLWHKRLGHAS 1641
L++G L LYILQ+ S NS S+ +N++ N +FDLWH RLGH S
Sbjct: 496 LMIGPANLQCNLYILQRQNFSENKIVNSARTSSDNNMN-------NSNFDLWHYRLGHPS 548
Query: 1642 PYLLQHL 1662
+LQ +
Sbjct: 549 DSVLQQI 555
>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 419 bits (1076), Expect = e-123
Identities = 304/1016 (29%), Positives = 447/1016 (43%), Gaps = 57/1016 (5%)
Frame = +3
Query: 51 DPLHLQGSDHPGSTLVSTPLTGNNYLSWSRSMLIALGAKTKLGFINGKISAPDIASPMYE 230
+PL L SDHPG ++V+ L G+NY SWS +M I+L AK KLGF++G + P + +
Sbjct: 56 NPLLLHSSDHPGLSIVAHILDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPSVDDSTFR 115
Query: 231 KWKKVDCMVISWILNSISKDIVDAFIYASTARDLWEDIAERFGECNGPLLFQLKKEISNL 410
W + + MV N P +QL++ + L
Sbjct: 116 IWSRCNSMVN-----------------------------------NLPRRYQLEQAVMTL 140
Query: 411 KQGNSSVVVYFTKLKKLWDELSCLSP--LPACSCGTSKLLSERDMNDRLMQFLMGLNDTY 584
+QG + YFTK K LW++L+ + C C K L E R++QFLMGL+D +
Sbjct: 141 QQGKLDLSTYFTKKKTLWEQLANTKSRSVKKCDCDQVKELLEEAETSRVIQFLMGLSDDF 200
Query: 585 EHVRNQILIMDPLPNINKAYSMFLTVEKQRSVQLAIAD-PLENSAMLSKLSNYPHNNTYK 761
+R+QI M P P +N+ Y+M E QR V A P + A NT
Sbjct: 201 NTIRSQIFNMKPRPGLNEIYNMLDQDESQRLVGFAAKSVPSPSPAAFQTQGVLNDQNTIL 260
Query: 762 SAANNSSGYRNKGTYRRTKEEKAKLRCDHCQVMGHEVSECFKLHGYPEWFKTFKEQKGKQ 941
A N K +C HC +GH V +C+K+HGYP KE
Sbjct: 261 LAQGNFK----------------KPKCTHCNRIGHTVDKCYKVHGYPPGHPRAKENT-YV 303
Query: 942 SSANLVGSDNIRPAANTEGKSTQMPDMSMMIQQEIAKFLSGKMMN------------NPT 1085
S NL +D I A +T MS Q++ +LS K+ + + +
Sbjct: 304 GSTNLASTDQIETQAPPTMSATGHETMSNDHIQQLISYLSTKLQSPSITSCFDKAIASSS 363
Query: 1086 SPDPSVSFAHFADFAGKLTPL---------------TTHYAMSTLE-----NLDSNSWIL 1205
+P PS+S A P+ +T+Y M T L +W++
Sbjct: 364 NPVPSISQITDKAIASSSNPVPSISQITGTFFSLYDSTYYEMLTSSIPIETELSLRAWVI 423
Query: 1206 DTGASRHMCATPSFISQITPLSSIITVCLPDGSTKPVTHTGHITLTPTLKLQDVLIIPSF 1385
D+GAS H+ + L V LP+G T + TG I LT L L +VL IP F
Sbjct: 424 DSGASHHVTHERNLYHTYKALDRTF-VRLPNGHTVKIEGTGFIQLTDALSLHNVLFIPEF 482
Query: 1386 KHNLLSISQLTQQSNLKCIFYPYHCVLQ----DLTSGSGQVTWKALHITARTL*Y*FC*C 1553
K NLLS+S LT+ K F C++Q +L G G +
Sbjct: 483 KFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQVGNLYILNL---------- 532
Query: 1554 QYS*QHQCIXXXXXXXXXXXXAQEAWSCLP-----LSVATSSEFLKPLCKPDVFKESQSC 1718
S E W + T S+ L L K + K+S C
Sbjct: 533 DKSLVDVSSFPGKSVCSSVKNESEMWHKRLGHPSFAKIDTLSDVLM-LPKQKINKDSSHC 591
Query: 1719 DIYHQSKQHRIVFPHSTIQSTSIFDLIHVDIWGLYKAECITNTPFLLNIVDDYSRATWTF 1898
+ H SKQ + F F+L+H+D WG + + + + L IVDD+SRATW +
Sbjct: 592 HVCHLSKQKHLPFKSVNHIREKAFELVHIDTWGPFSVPTVDSYRYFLTIVDDFSRATWIY 651
Query: 1899 LMTHKSQTLQLLKSFFTMIHTQFNVKIKAIRSDNGSEFLSHDCQNFFQTCGVIHQKSCVY 2078
L+ KS L + SF M+ TQ++ K+ ++RSDN E ++ F G+ C
Sbjct: 652 LLKQKSDVLTVFPSFLKMVETQYHTKVCSVRSDNAHELKFNE---LFAKEGIKADHPCPE 708
Query: 2079 TPQQNGVVERRHRHLLNIARALMFQSQVPHHLWPFSILTATYIANRLPHSSLNWQTPFSV 2258
TP+QN VVER+H+HLLN+ARALMFQS +P W +LTA ++ NRL +N +TP+
Sbjct: 709 TPEQNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPVINNETPYER 768
Query: 2259 LYNRHPDYTLLKPFGCLAYATNLSPQKSKFAQRAHKCIFVGYVPGQKGYTLYDLESHSLH 2438
L PDY+ LK FGCL Y + ++KF RA CIF+GY G KGY L D+E++S+
Sbjct: 769 LTKGKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVS 828
Query: 2439 TSRDVLFVESCFPCXXXXXXXXXXXXXXXXXMDA---DSFVXXXXXXXXXXXXXXXAE-- 2603
SR V+F E FP + A D + +
Sbjct: 829 ISRHVIFYEDIFPFASSNITDAAKDFFPHIYLPAPNNDEHLPLVQSSSDAPHNHDESSSM 888
Query: 2604 ---PQLRRSTRETRHPAWWEDFVTNVHDDLPSDTNXXXXXXXXXXXXPNTFPYTSSSLFH 2774
P +STR+ + P+ +DF + +++ P+ T T PY ++
Sbjct: 889 IFVPSEPKSTRQRKLPSHLQDF--HCYNNTPTTT--------------KTSPYPLTNYIS 932
Query: 2775 HTYLS-----FLAKVDTIQEPKSYFQAKTNAKWVEAMNQELQALEHNHTWILTDLP 2927
++YLS F+ + + P+ Y +A+ + W +AM +E+ A TW + DLP
Sbjct: 933 YSYLSEPFGAFINIITATKLPQKYSEARLDKVWNDAMGKEISAFVRTGTWSICDLP 988