BLASTX nr result
ID: Rehmannia27_contig00041278
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00041278
(1755 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera] 166 1e-39
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 164 5e-39
gb|KYP53212.1| Retrovirus-related Pol polyprotein from transposo... 154 3e-37
gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposo... 154 6e-36
gb|KYP45414.1| Retrovirus-related Pol polyprotein from transposo... 149 4e-35
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 150 1e-34
ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643... 149 3e-34
ref|XP_012491075.1| PREDICTED: uncharacterized protein LOC105803... 148 6e-34
gb|KYP46802.1| Retrovirus-related Pol polyprotein from transposo... 147 8e-34
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ... 146 1e-33
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo... 147 2e-33
gb|KYP66597.1| Retrovirus-related Pol polyprotein from transposo... 144 2e-33
gb|KYP66618.1| Retrovirus-related Pol polyprotein from transposo... 144 5e-33
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 144 1e-32
ref|XP_012471034.1| PREDICTED: uncharacterized protein LOC105788... 137 1e-32
gb|KYP38888.1| Retrovirus-related Pol polyprotein from transposo... 141 2e-32
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 143 3e-32
gb|KYP59913.1| Retrovirus-related Pol polyprotein from transposo... 133 3e-31
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] 135 8e-30
emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera] 133 4e-29
>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
Length = 2203
Score = 166 bits (419), Expect = 1e-39
Identities = 108/341 (31%), Positives = 153/341 (44%), Gaps = 34/341 (9%)
Frame = +1
Query: 835 CQICGKNNHIASKCFKRFDVNFPGI----NLSAAQAHVVTAPGFNPESQSTAGFQN-SVS 999
CQ+CGK H A KCF RFDV F N + H P P + +
Sbjct: 170 CQLCGKMGHTAMKCFHRFDVYFQSPPHAQNQQFSSLHQPQQPQLRPPPLHQPQYYSIGPL 229
Query: 1000 ATSYDVNSSPGTTDSPCFA--GYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTG 1173
S + +S DS + Y WFVDSGAT+H+T D L + Y+G
Sbjct: 230 VPSRPIQNSHQQLDSTNTSPHAYIVAPDLNSNTSWFVDSGATHHMTTDSNTLDVFDHYSG 289
Query: 1174 PDKLTIGNGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYV 1353
+ +GNG L IS +G +L VP ITKNL+S++KFT+DN V +
Sbjct: 290 TGNVVVGNGQTLDISSVGHTSFPSRKSSKSLHLANVLHVPQITKNLISVAKFTQDNDVIL 349
Query: 1354 EFHFDSCLVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQ--STPL 1527
EF C VKD + +LL+G LK+GLYQLD++ + + +TP
Sbjct: 350 EFDSHCCFVKDKKSREILLQGNLKEGLYQLDISKVSSNRQFVGFSEDTNVFLPHLATTPS 409
Query: 1528 ------------YSF-VSSVDNV-----------NLWQKRLGHPCNKVLSIV-XXXXXXX 1632
YS V+ +++ +LW +RLGHPCNK++S+V
Sbjct: 410 TVNKQSVAPSVGYSLQVNKIESTRCVEDNNTGVGHLWHQRLGHPCNKIVSLVLDRLGIKS 469
Query: 1633 XXXXXXNFCDAYKMGKIHNMHFPTVESKATAPFDIIYSDLW 1755
NFC A +GK PT +K PF++++SD+W
Sbjct: 470 KLQNELNFCTACPLGKAKQFPLPTTINKTQVPFELVFSDVW 510
Score = 87.8 bits (216), Expect = 2e-14
Identities = 38/78 (48%), Positives = 51/78 (65%)
Frame = +3
Query: 3 TTFKVFQCDSGG*YKPIYTFLHSLGVHVRHPCPYTHQQNGKPERKHQHITEMGLSMLATA 182
T K Q D GG + P+ + L G+ RHPCP+ HQQNGK ERKH+ I E+GL++LA +
Sbjct: 563 TKLKCLQTDWGGEFHPLQSLLQKKGILFRHPCPHVHQQNGKVERKHRSIVEIGLTLLAKS 622
Query: 183 NLPMKFWWDAFVSSDTML 236
LP FWW AF ++ +L
Sbjct: 623 QLPFTFWWHAFSTATYLL 640
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 164 bits (414), Expect = 5e-39
Identities = 104/313 (33%), Positives = 144/313 (46%), Gaps = 3/313 (0%)
Frame = +1
Query: 826 KPSCQICGKNNHIASKCFKRFDVNFPGINLSAAQAHVVTAPGFNPESQSTAGFQNSVSAT 1005
KP+CQ+CGK H+ ++C+ RFD H P QN S
Sbjct: 307 KPACQLCGKIGHVVAQCYYRFD-------------HTFQVP------------QNLSSR- 340
Query: 1006 SYDVNSSPGT--TDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTGPD 1179
NSSP + SP G S + W+ DSGA+NH+T + NL + + G +
Sbjct: 341 ----NSSPRAYYSFSPQVNGVIPTSEVFSDDNWYPDSGASNHVTPNPENLMKSAEFAGQN 396
Query: 1180 KLTIGNGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYVEF 1359
++ +GNG+ L I HIG +L VP ITKNLLS+SKF KDN V+ EF
Sbjct: 397 QVHVGNGTGLSIKHIGQSEFLSPFSSKPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEF 456
Query: 1360 HFDSCLVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPLYSFV 1539
H DSC VKD T VL+ G ++DGLY D + L S+ + +
Sbjct: 457 HSDSCFVKDQVTQAVLMVGKVRDGLYAFDSSHLALRPTQSLSKSPSVVASSFSSKVCT-T 515
Query: 1540 SSVDNVNLWQKRLGHP-CNKVLSIVXXXXXXXXXXXXXNFCDAYKMGKIHNMHFPTVESK 1716
S +LW KRLGHP + +++ NFC + +GKIH F +
Sbjct: 516 SLSSTFDLWHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTT 575
Query: 1717 ATAPFDIIYSDLW 1755
T P ++I+ DLW
Sbjct: 576 YTKPLELIHLDLW 588
Score = 89.0 bits (219), Expect = 8e-15
Identities = 39/63 (61%), Positives = 53/63 (84%)
Frame = -2
Query: 674 WCDNISAISLASNPVFHARTKHIEVDVHFIREQVKRNEVDVRFLASKDQLADILTKPVSI 495
WCDN+S + L++NPV HARTKHIE+D++F+RE+V R EV+VR + S DQLAD+LTK VS
Sbjct: 1369 WCDNLSTVLLSANPVLHARTKHIELDLYFVREKVIRKEVEVRHVPSADQLADVLTKTVSS 1428
Query: 494 SRF 486
++F
Sbjct: 1429 TQF 1431
Score = 67.8 bits (164), Expect = 3e-08
Identities = 32/68 (47%), Positives = 45/68 (66%)
Frame = +3
Query: 12 KVFQCDSGG*YKPIYTFLHSLGVHVRHPCPYTHQQNGKPERKHQHITEMGLSMLATANLP 191
K Q D GG ++ ++L G+ R CP+T QQNG ERKH+ I E GL++L TA+LP
Sbjct: 644 KSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLP 703
Query: 192 MKFWWDAF 215
+KFW ++F
Sbjct: 704 LKFWDESF 711
>gb|KYP53212.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 533
Score = 154 bits (390), Expect = 3e-37
Identities = 103/313 (32%), Positives = 142/313 (45%), Gaps = 3/313 (0%)
Frame = +1
Query: 826 KPSCQICGKNNHIASKCFKRFDVNFPGINLSAAQAHVVTAPGFNPESQS-TAGFQNSVSA 1002
K CQ+CGK HIA C+ R+D + NL+ V PG + Q+ AG QN V
Sbjct: 136 KQPCQVCGKIGHIAFHCWHRYDQQYTEPNLN--HNTNVYNPGNQQQMQAMIAGSQNMV-- 191
Query: 1003 TSYDVNSSPGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTGPDK 1182
++ QW+ DSGATNH+T+DL NL + YTG DK
Sbjct: 192 ---------------------------YDDQWYPDSGATNHLTSDLNNLGSKTDYTGQDK 224
Query: 1183 LTIGNGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYVEFH 1362
+ +GNG + I+H G +L VP ITKNLLS+SKF KDN VYVEFH
Sbjct: 225 IHMGNGQAIGINHTGTSFFHTPMSSKIFTLKELLHVPHITKNLLSVSKFCKDNNVYVEFH 284
Query: 1363 FDSCLVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPLYSFVS 1542
+ CLVK + LLRG LK+GLY D + T LY
Sbjct: 285 TNYCLVKSQDSKETLLRGNLKNGLYVFDEVQI---LKPDVYEHTVDSVPTNRTTLY-VQR 340
Query: 1543 SVDNVNLWQKRLGHPCNKVLSIVXXXXXXXXXXXXXN--FCDAYKMGKIHNMHFPTVESK 1716
+ + ++W RL H K++ V + C + +GK H + F +
Sbjct: 341 TRKSYDVWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKSHTLPFSDSYTV 400
Query: 1717 ATAPFDIIYSDLW 1755
+P +++YSD+W
Sbjct: 401 YNSPLELVYSDVW 413
Score = 62.0 bits (149), Expect = 1e-06
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +3
Query: 12 KVFQCDSGG*YKPIYTFLHSLGVHVRHPCPYTHQQNGKPERKHQHITEMGLSMLATANLP 191
K+FQ D G + + + G+ R CP++HQQNG ERKH+HITE+GL++L+++ LP
Sbjct: 469 KMFQSDGGKEFTCLTKLFNENGITHRLSCPHSHQQNGTAERKHRHITEVGLTLLSSSGLP 528
Query: 192 MKF 200
F
Sbjct: 529 HIF 531
>gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1403
Score = 154 bits (390), Expect = 6e-36
Identities = 103/313 (32%), Positives = 142/313 (45%), Gaps = 3/313 (0%)
Frame = +1
Query: 826 KPSCQICGKNNHIASKCFKRFDVNFPGINLSAAQAHVVTAPGFNPESQS-TAGFQNSVSA 1002
K CQ+CGK HIA C+ R+D + NL+ V PG + Q+ AG QN V
Sbjct: 270 KQPCQVCGKIGHIAFHCWHRYDQQYTEPNLN--HNTNVYNPGNQQQMQAMIAGSQNMV-- 325
Query: 1003 TSYDVNSSPGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTGPDK 1182
++ QW+ DSGATNH+T+DL NL + YTG DK
Sbjct: 326 ---------------------------YDDQWYPDSGATNHLTSDLNNLGSKTDYTGQDK 358
Query: 1183 LTIGNGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYVEFH 1362
+ +GNG + I+H G +L VP ITKNLLS+SKF KDN VYVEFH
Sbjct: 359 IHMGNGQAIGINHTGTSFFHTPMSSKIFTLKELLHVPHITKNLLSVSKFCKDNNVYVEFH 418
Query: 1363 FDSCLVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPLYSFVS 1542
+ CLVK + LLRG LK+GLY D + T LY
Sbjct: 419 TNYCLVKSQDSKETLLRGNLKNGLYVFDEVQI---LKPDVYEHTVDSVPTNRTTLY-VQR 474
Query: 1543 SVDNVNLWQKRLGHPCNKVLSIVXXXXXXXXXXXXXN--FCDAYKMGKIHNMHFPTVESK 1716
+ + ++W RL H K++ V + C + +GK H + F +
Sbjct: 475 TRKSYDVWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKSHTLPFSDSYTV 534
Query: 1717 ATAPFDIIYSDLW 1755
+P +++YSD+W
Sbjct: 535 YNSPLELVYSDVW 547
Score = 72.4 bits (176), Expect = 1e-09
Identities = 32/72 (44%), Positives = 50/72 (69%)
Frame = -2
Query: 674 WCDNISAISLASNPVFHARTKHIEVDVHFIREQVKRNEVDVRFLASKDQLADILTKPVSI 495
WCDN A+ L++NPV H +TKH E+D+ F+RE+V R ++ V+ + ++ Q+AD+LTK S
Sbjct: 1316 WCDNQGAVLLSANPVLHTKTKHFELDLWFVRERVARGQIQVKHIPARFQVADLLTKAPSS 1375
Query: 494 SRFKMLCPKFSL 459
S F L K ++
Sbjct: 1376 SIFLALRHKLTV 1387
Score = 71.2 bits (173), Expect = 3e-09
Identities = 32/68 (47%), Positives = 46/68 (67%)
Frame = +3
Query: 12 KVFQCDSGG*YKPIYTFLHSLGVHVRHPCPYTHQQNGKPERKHQHITEMGLSMLATANLP 191
K+FQ D G + + + G+ R CP++HQQNG ERKH+HITE+GL++L+++ LP
Sbjct: 603 KMFQSDGGKEFTCLTKLFNENGITHRLSCPHSHQQNGTAERKHRHITEVGLTLLSSSGLP 662
Query: 192 MKFWWDAF 215
FW DAF
Sbjct: 663 HIFWSDAF 670
>gb|KYP45414.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 567
Score = 149 bits (376), Expect = 4e-35
Identities = 99/320 (30%), Positives = 136/320 (42%), Gaps = 10/320 (3%)
Frame = +1
Query: 826 KPSCQICGKNNHIASKCFKRFDVNFPGINLSAAQAHVVTAPGFNPESQSTAGFQNSVSAT 1005
K CQ+CGK HIA C+ R+D F P FN + ST
Sbjct: 179 KQQCQVCGKIGHIAFYCWHRYDQQF-------------AEPNFNNNTNST---------- 215
Query: 1006 SYDVNSSPGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTGPDKL 1185
NS F G + + ++ QW+ DSGATNH+T DL NL + G DK+
Sbjct: 216 ----NSGTSQQMQAMFVG---SQTMPYDDQWYPDSGATNHLTPDLNNLGSRTTTIGQDKI 268
Query: 1186 TIGNGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYVEFHF 1365
+GNG + I+H G +L VP ITKNLLS+SK +DN VY+EFH
Sbjct: 269 HMGNGQAIGINHTGTSMFHTRMSPKVFILKDLLHVPHITKNLLSVSKLCRDNEVYLEFHI 328
Query: 1366 DSCLVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPLYSFVSS 1545
+ C VK + +LL+G LK+GLY D S VS+
Sbjct: 329 NHCFVKSQDSKEILLQGNLKNGLYVFD-------------AVKFLKPDANSAAYVPTVST 375
Query: 1546 VDNVN-------LWQKRLGHPCNKVLSIV---XXXXXXXXXXXXXNFCDAYKMGKIHNMH 1695
+ NV +W RL H K++ V + C + +GK H +
Sbjct: 376 ILNVQRYEKSYVVWHNRLSHASRKIVEAVMKTCNIPLTVHNNKDFSVCKSCCIGKSHALP 435
Query: 1696 FPTVESKATAPFDIIYSDLW 1755
F + AP ++IYSD+W
Sbjct: 436 FSDSNNLYNAPLELIYSDVW 455
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 150 bits (380), Expect = 1e-34
Identities = 101/312 (32%), Positives = 139/312 (44%), Gaps = 2/312 (0%)
Frame = +1
Query: 826 KPSCQICGKNNHIASKCFKRFDVNFPGINLSAAQAHVVTAPGFNPESQSTAGFQNSVSAT 1005
KP CQ+CG+ H+ +C+ RFD +F G + G P+ + A +S
Sbjct: 283 KPQCQLCGRIGHVVMQCYYRFDQSFTGPS---------QLQGNRPQG-NMAHLHQQLSEX 332
Query: 1006 SYDVNSSPGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTGPDKL 1185
+ PGT + + + W+ DSGAT+H+T +L NL S + D++
Sbjct: 333 FF-----PGTPSVK-----PTTAEIIQDNNWYPDSGATHHLTPNLNNLLTKSQFPSSDEV 382
Query: 1186 TIGNGSQLLISHIGXXXXXXXXXXXXXXXXX-ILCVPDITKNLLSISKFTKDNGVYVEFH 1362
+GNG L I HIG +L VP+ITKNLLS+SKF DN V+ EFH
Sbjct: 383 FVGNGKGLPIHHIGHTSFSSSFIPSKTLALKQLLHVPEITKNLLSVSKFAADNHVFFEFH 442
Query: 1363 FDSCLVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPLYSFVS 1542
SC VKD +T VL+ G LK GLY D L + T S
Sbjct: 443 PTSCFVKDPSTRTVLMHGQLKGGLYVFDNTQLKLPLHNSSCFASTALPSKEPTVP---AS 499
Query: 1543 SVDNVNLWQKRLGHPCNKVLSIVXXXXXXXXXXXXXN-FCDAYKMGKIHNMHFPTVESKA 1719
LW RLGHP + ++S+V + C MGKIH F S
Sbjct: 500 PTSPFTLWHNRLGHPSSHIVSLVLNKCNLPHLNKIPSLICSXCCMGKIHKSSFLHSTSSY 559
Query: 1720 TAPFDIIYSDLW 1755
T P ++I++DLW
Sbjct: 560 TKPLELIHTDLW 571
Score = 81.3 bits (199), Expect = 2e-12
Identities = 33/71 (46%), Positives = 51/71 (71%)
Frame = -2
Query: 674 WCDNISAISLASNPVFHARTKHIEVDVHFIREQVKRNEVDVRFLASKDQLADILTKPVSI 495
WCDN+S + L++NP+ HARTKHI++D++F+RE+V + ++ + + S DQLAD+ TK
Sbjct: 1283 WCDNLSTVYLSANPILHARTKHIKIDLYFVREKVLQKQIQIHHVPSSDQLADVFTKATPN 1342
Query: 494 SRFKMLCPKFS 462
SRF + K S
Sbjct: 1343 SRFLTIRAKLS 1353
Score = 77.0 bits (188), Expect = 4e-11
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +3
Query: 12 KVFQCDSGG*YKPIYTFLHSLGVHVRHPCPYTHQQNGKPERKHQHITEMGLSMLATANLP 191
K Q D GG Y+ +L S G+ R CPYTH+QNG ERKH+HI E G+++LA A+LP
Sbjct: 627 KAVQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQASLP 686
Query: 192 MKFWWDAFVSS 224
K+W +AF +S
Sbjct: 687 FKYWDEAFRTS 697
>ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643719 [Jatropha curcas]
Length = 1003
Score = 149 bits (376), Expect = 3e-34
Identities = 102/317 (32%), Positives = 143/317 (45%), Gaps = 7/317 (2%)
Frame = +1
Query: 826 KPSCQICGKNNHIASKCFKRFDVNFPGINLSAAQA------HVVTAPGFNPESQSTAGFQ 987
K CQICG NH A KC +R+ + P N + + + + P +P ++ F
Sbjct: 252 KGPCQICGYRNHTADKCRRRYHRSNPSQNQNQVRYPPPMANYSYSYPSPSPYPSPSSHFS 311
Query: 988 NSVSATSYDVNSSPGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAY 1167
+ S T+Y + SP A YS+ S + W D+ A H+T D+ +LS + Y
Sbjct: 312 SPQSVTNY-------YSPSPPMANYSAASPT--QNLWHPDTAANYHVTPDIQSLSATTEY 362
Query: 1168 TGPDKLTIGNGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGV 1347
G D L +GNG L ISH G LCVP I KNLLS+ KFT DN
Sbjct: 363 QGHDNLHVGNGVGLPISHTGTVVIPSSNGALQLKHT--LCVPKIVKNLLSVQKFTTDNCC 420
Query: 1348 YVEFHFDSCLVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPL 1527
+ EF VKD T ++LL+G +DG+Y L L PL
Sbjct: 421 FFEFWPHCFFVKDQVTKKILLQGPSEDGIYSLKL------------------------PL 456
Query: 1528 YSFVS-SVDNVNLWQKRLGHPCNKVLSIVXXXXXXXXXXXXXNFCDAYKMGKIHNMHFPT 1704
S +S +V + + W LGHP + +S + N C A +GK+ + +
Sbjct: 457 KSVMSATVPSFSDWHSALGHPHRRTVSKIIKDFNLPCSSFQFNPCSACNLGKLSRLSLAS 516
Query: 1705 VESKATAPFDIIYSDLW 1755
VE K+T PF II+SD W
Sbjct: 517 VEHKSTGPFQIIHSDFW 533
Score = 92.8 bits (229), Expect = 4e-16
Identities = 38/63 (60%), Positives = 52/63 (82%)
Frame = -2
Query: 674 WCDNISAISLASNPVFHARTKHIEVDVHFIREQVKRNEVDVRFLASKDQLADILTKPVSI 495
WCDNI AI L SNPVFHARTKHIE+DVHF+R+QV+ ++ ++F++ +DQ+ADI+TKP+
Sbjct: 925 WCDNIGAIYLTSNPVFHARTKHIELDVHFVRDQVQHKKIQIKFISGQDQIADIMTKPLGS 984
Query: 494 SRF 486
F
Sbjct: 985 RLF 987
>ref|XP_012491075.1| PREDICTED: uncharacterized protein LOC105803429 [Gossypium raimondii]
Length = 1268
Score = 148 bits (374), Expect = 6e-34
Identities = 97/315 (30%), Positives = 136/315 (43%), Gaps = 5/315 (1%)
Frame = +1
Query: 826 KPSCQICGKNNHIASKCFKRFDVNFPGIN--LSAAQAHVVTAPGFNPESQSTAGFQNSVS 999
+P CQ+CGK HI + RFD NF G N ++ QAH +T
Sbjct: 257 RPQCQLCGKIGHIVQNYYHRFDENFFGQNPSINFHQAHGLT------------------- 297
Query: 1000 ATSYDVNSSPGTTDSP--CFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTG 1173
P T S C S +SS Q W+ DSGATNH+T D NL S YTG
Sbjct: 298 ---------PATACSHVHCSGSCSCSSSTTSGQTWYPDSGATNHVTPDDSNLVSVSPYTG 348
Query: 1174 PDKLTIGNGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYV 1353
++ GNG I+++G +L VP + KNLLS+ +F KDNGVY
Sbjct: 349 TGQVVTGNGKSASIANVGSSTVMAGSRLLHLQH--VLHVPTVCKNLLSVGQFAKDNGVYF 406
Query: 1354 EFHFDSCLVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPLYS 1533
EFH C VKD ++LL G + D LY+ + +S+ +
Sbjct: 407 EFHPYLCFVKDLQIGKILLEGHMHDDLYRFQFS---------KSTFGIDRSKLKSSSCFI 457
Query: 1534 FVSSVDNVNLWQKRLGHPCNKVLS-IVXXXXXXXXXXXXXNFCDAYKMGKIHNMHFPTVE 1710
+ LW RLGHPC+ L+ ++ C A ++G H + F +
Sbjct: 458 NSAQFSTATLWHNRLGHPCSTALTRVLKSCKIPFVQSHLDQICTACQIGNAHKLPFSLSQ 517
Query: 1711 SKATAPFDIIYSDLW 1755
+ PFD++ SD+W
Sbjct: 518 TVYKFPFDLVVSDVW 532
>gb|KYP46802.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 787
Score = 147 bits (371), Expect = 8e-34
Identities = 99/311 (31%), Positives = 141/311 (45%), Gaps = 1/311 (0%)
Frame = +1
Query: 826 KPSCQICGKNNHIASKCFKRFDVNFPGINLSAAQAHVVTAPGFNPESQSTAGFQNSVSAT 1005
KP+CQICGK HIA C+ R++ + Q H P N +G+ S + T
Sbjct: 297 KPTCQICGKIGHIALNCYYRYNQEY--------QNH----PQANNTQFQPSGYDISETTT 344
Query: 1006 SYDVNSSPGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTGPDKL 1185
++P T P W+ DSGA+ HIT D NLS+ SAYTG D +
Sbjct: 345 L----ATPSTVQDPL---------------WYPDSGASYHITHDESNLSMKSAYTGTDSV 385
Query: 1186 TIGNGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYVEFHF 1365
IGN + L ISH+G +L VP ITKNLLS+SKF +DN V+ EF
Sbjct: 386 NIGNSTGLHISHVGHSYFHNPMSSKHFVRHNLLHVPSITKNLLSVSKFARDNRVFFEFWP 445
Query: 1366 DSCLVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPLYSFVSS 1545
D C VK T ++L+G LKD LY + P+ S+
Sbjct: 446 DCCNVKTQDTKDMILQGHLKDDLY--------------VFPQFQKVQIVYAHPVQK-DSN 490
Query: 1546 VDNVNLWQKRLGHPCNKVLSIVXXXXXXXXXXXXXNF-CDAYKMGKIHNMHFPTVESKAT 1722
LW RLGHP +++ + +F CD+ MGK H + F ++
Sbjct: 491 HSLFQLWHSRLGHPSPRIVKLALKHCNIPSSHFPDSFLCDSCCMGKAHQLPFVQSTTEYK 550
Query: 1723 APFDIIYSDLW 1755
+P +++++D+W
Sbjct: 551 SPLELVFTDIW 561
Score = 67.8 bits (164), Expect = 3e-08
Identities = 32/75 (42%), Positives = 47/75 (62%)
Frame = +3
Query: 12 KVFQCDSGG*YKPIYTFLHSLGVHVRHPCPYTHQQNGKPERKHQHITEMGLSMLATANLP 191
K Q D+ Y +L G+ R CP TH+QNG ERKH+HI E GL++LA A+LP
Sbjct: 617 KALQSDNAKEYIKFTKYLTEHGIKHRFSCPDTHEQNGSLERKHRHIVETGLTLLANASLP 676
Query: 192 MKFWWDAFVSSDTML 236
+ F +AF+++ T++
Sbjct: 677 LHFLAEAFLTTTTLI 691
>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
Length = 646
Score = 146 bits (368), Expect = 1e-33
Identities = 95/311 (30%), Positives = 141/311 (45%), Gaps = 1/311 (0%)
Frame = +1
Query: 826 KPSCQICGKNNHIASKCFKRFDVNFPGINLSAAQAHVVTAPGFNPESQSTAGFQNSVSAT 1005
+P CQIC K H+A++C+ RFD F Q A N S++
Sbjct: 311 RPQCQICCKIGHVATECWHRFDNQF----------------------QPKASHSNQFSSS 348
Query: 1006 SYDVNSSPGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTGPDKL 1185
+ D + +P G E WF+D+GAT+H+T+DL NLSLH+ ++G DK+
Sbjct: 349 AQDPQALMA---APGLLG---------ETPWFLDTGATHHVTSDLANLSLHNPFSGDDKV 396
Query: 1186 TIGNGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYVEFHF 1365
+GNG L + H G +L VP I NL+S+ K DN YVEF+
Sbjct: 397 IVGNGKGLYVLHTG--HSSIPTSQGALLLKNVLHVPKIAANLVSVQKLCHDNNAYVEFYP 454
Query: 1366 DSCLVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPLYSFVSS 1545
VKD T +LL+G L GLY + A S+ +S
Sbjct: 455 SYFAVKDQKTQAILLKGGLDKGLYSVP----SAYSSHAPQARVFQIFSTSSS------TS 504
Query: 1546 VDNVNLWQKRLGHPCNKVLS-IVXXXXXXXXXXXXXNFCDAYKMGKIHNMHFPTVESKAT 1722
+D++ LW RLGHP +++ ++ CD+ ++ K H + F SKA
Sbjct: 505 IDSMRLWHNRLGHPSLAIVNKVLNHYNLPVFSLQNKLLCDSCQLAKSHKLPFVRNYSKAM 564
Query: 1723 APFDIIYSDLW 1755
PFD++++DLW
Sbjct: 565 KPFDLVHADLW 575
>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1165
Score = 147 bits (370), Expect = 2e-33
Identities = 98/308 (31%), Positives = 134/308 (43%), Gaps = 1/308 (0%)
Frame = +1
Query: 835 CQICGKNNHIASKCFKRFDVNFPGINLSAAQAHVVTAPGFNPESQSTAGFQNSVSATSYD 1014
CQ+C K H AS C+ RF+ N+ G N ++ +N
Sbjct: 177 CQVCCKPGHAASHCYHRFNKNYIGQNSDEQKSEKDKEQNYN------------------- 217
Query: 1015 VNSSPGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTGPDKLTIG 1194
F Y ++ S + W+ DSGA+NH+T D + + G LT+G
Sbjct: 218 ------------FNAYVASPSTVEDLDWYFDSGASNHVTYDQNKVQEVNENDGKSFLTVG 265
Query: 1195 NGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYVEFHFDSC 1374
NG+ L I I IL VP ITKNLLSISK T DN +YVEFH +C
Sbjct: 266 NGANLKI--IACGDSSLDTQQKSLNLKDILYVPKITKNLLSISKLTFDNDIYVEFHDVAC 323
Query: 1375 LVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPLYSFVSSVDN 1554
VKD T R+LL G +KDGLYQL + F S +
Sbjct: 324 FVKDKLTGRILLEGKIKDGLYQLPGGSTSTNKRP-----------------HVFFSIKET 366
Query: 1555 VNLWQKRLGHPCNKVLS-IVXXXXXXXXXXXXXNFCDAYKMGKIHNMHFPTVESKATAPF 1731
W ++LGHP +KVL+ ++ FC+A + GK HN+ F S A P
Sbjct: 367 ---WHRKLGHPNSKVLNEVMKLCNIEASPCENFEFCEACQFGKAHNLPFQNSVSCAKEPL 423
Query: 1732 DIIYSDLW 1755
D+++SD+W
Sbjct: 424 DLVHSDVW 431
Score = 84.3 bits (207), Expect = 2e-13
Identities = 36/88 (40%), Positives = 55/88 (62%)
Frame = +3
Query: 12 KVFQCDSGG*YKPIYTFLHSLGVHVRHPCPYTHQQNGKPERKHQHITEMGLSMLATANLP 191
K QCD GG +K + L G+ +R CPYT QNG+ ERKH+H+ E GL++LA A +P
Sbjct: 487 KTLQCDGGGEFKSLSKVLIKTGIQLRESCPYTSAQNGRAERKHRHVVESGLTLLAQAKMP 546
Query: 192 MKFWWDAFVSSDTMLRVGRKHNRYIEDR 275
+ +WW+AF S + + R + I+++
Sbjct: 547 LHYWWEAF--STAVFLINRLPTQVIKNK 572
>gb|KYP66597.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 562
Score = 144 bits (363), Expect = 2e-33
Identities = 88/308 (28%), Positives = 139/308 (45%), Gaps = 1/308 (0%)
Frame = +1
Query: 835 CQICGKNNHIASKCFKRFDVNFPGINLSAAQAHVVTAPGFNPESQSTAGFQNSVSATSYD 1014
CQ+CGK H A C+ RFD N P P + S A Q +
Sbjct: 237 CQLCGKLGHSAYHCWSRFDENLPD-------------PKTTQHNTSDAVIQEPLHQAMTA 283
Query: 1015 VNSSPGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTGPDKLTIG 1194
+++ + D + W+ D+GA+NH T++L NL + + + G +K+ +G
Sbjct: 284 TSATQSSLD----------------ETWYPDTGASNHFTSNLSNLMIKTPFVGTEKVVVG 327
Query: 1195 NGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYVEFHFDSC 1374
NG+ L I +IG +L VPDITKNLLS+++F K+N + EFH C
Sbjct: 328 NGNCLPIHNIGTSKLKNPSNNIAFTLNKLLHVPDITKNLLSVAQFAKENSCFFEFHSTDC 387
Query: 1375 LVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPLYSFVSSVDN 1554
VK + ++LL+G LK+GLY + + LYS ++ ++
Sbjct: 388 FVKSQGSRKILLQGKLKNGLYAFE-----------NLQIVHPNNDFPVSALYS-STTCNS 435
Query: 1555 VNLWQKRLGHPCNKVLS-IVXXXXXXXXXXXXXNFCDAYKMGKIHNMHFPTVESKATAPF 1731
+ +W RLGH NK++ ++ C + +GK+H F ES T P
Sbjct: 436 LPIWHSRLGHCANKIVKHVLKQCNISVPLHDNATVCGSCCLGKMHKSSFSISESVYTEPL 495
Query: 1732 DIIYSDLW 1755
++YSD+W
Sbjct: 496 QLVYSDIW 503
>gb|KYP66618.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 660
Score = 144 bits (363), Expect = 5e-33
Identities = 88/308 (28%), Positives = 139/308 (45%), Gaps = 1/308 (0%)
Frame = +1
Query: 835 CQICGKNNHIASKCFKRFDVNFPGINLSAAQAHVVTAPGFNPESQSTAGFQNSVSATSYD 1014
CQ+CGK H A C+ RFD N P P + S A Q +
Sbjct: 67 CQLCGKLGHSAYHCWSRFDENLPD-------------PKTTQHNTSDAVIQEPLHQAMTA 113
Query: 1015 VNSSPGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTGPDKLTIG 1194
+++ + D + W+ D+GA+NH T++L NL + + + G +K+ +G
Sbjct: 114 TSATQSSLD----------------ETWYPDTGASNHFTSNLSNLMIKTPFVGTEKVVVG 157
Query: 1195 NGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYVEFHFDSC 1374
NG+ L I +IG +L VPDITKNLLS+++F K+N + EFH C
Sbjct: 158 NGNCLPIHNIGTSKLKNPSNNIAFTLNKLLHVPDITKNLLSVAQFAKENSCFFEFHSTDC 217
Query: 1375 LVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPLYSFVSSVDN 1554
VK + ++LL+G LK+GLY + + LYS ++ ++
Sbjct: 218 FVKSQGSRKILLQGKLKNGLYAFE-----------NLQIVHPNNDFPVSALYS-STTCNS 265
Query: 1555 VNLWQKRLGHPCNKVLS-IVXXXXXXXXXXXXXNFCDAYKMGKIHNMHFPTVESKATAPF 1731
+ +W RLGH NK++ ++ C + +GK+H F ES T P
Sbjct: 266 LPIWHSRLGHCANKIVKHVLKQCNISVPLHDNATVCGSCCLGKMHKSSFSISESVYTEPL 325
Query: 1732 DIIYSDLW 1755
++YSD+W
Sbjct: 326 QLVYSDIW 333
Score = 72.8 bits (177), Expect = 7e-10
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = +3
Query: 12 KVFQCDSGG*YKPIYTFLHSLGVHVRHPCPYTHQQNGKPERKHQHITEMGLSMLATANLP 191
K+ Q D+ Y+ + L G+ R CP+TH+QNG PERKH+HITE GL++LA + L
Sbjct: 389 KILQTDAAKEYQSFSSVLKESGIIHRFSCPHTHEQNGSPERKHRHITETGLTLLAESGLS 448
Query: 192 MKFWWDAF 215
++W+ AF
Sbjct: 449 FEYWYHAF 456
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 144 bits (364), Expect = 1e-32
Identities = 91/310 (29%), Positives = 135/310 (43%)
Frame = +1
Query: 826 KPSCQICGKNNHIASKCFKRFDVNFPGINLSAAQAHVVTAPGFNPESQSTAGFQNSVSAT 1005
+P CQ+CGK H +C+ RFD+NF G N P + + +N V A
Sbjct: 318 RPQCQLCGKFGHTVVRCYHRFDINFQGYN-----------PNMDTVQTNKPNAKNQVQA- 365
Query: 1006 SYDVNSSPGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTGPDKL 1185
+ +SP T ++ WF D+GAT+H++ + LS Y G DK+
Sbjct: 366 ---MMASPSTIS---------------DEAWFFDTGATHHLSQSIDPLSDVQPYMGNDKV 407
Query: 1186 TIGNGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYVEFHF 1365
+GNG L I H G +L VPDI NL+S+S+F DN + EFH
Sbjct: 408 IVGNGKHLRILHTGTTFFPSSSKTFQLRQ--VLHVPDIATNLISVSQFCADNNTFFEFHP 465
Query: 1366 DSCLVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPLYSFVSS 1545
VKD T ++LL+G+L+ GLY+ + + S S +S
Sbjct: 466 RFFFVKDQVTKKILLQGSLEHGLYRFPARFVPS----------PAAFVSSSYDRSSNLSL 515
Query: 1546 VDNVNLWQKRLGHPCNKVLSIVXXXXXXXXXXXXXNFCDAYKMGKIHNMHFPTVESKATA 1725
LW RLGHP + +L + N C A + K H + F S+A+
Sbjct: 516 TTTTTLWHSRLGHPADNILKHILTSCNISHQCHKNNVCCACQFAKSHKLPFNVXVSRASH 575
Query: 1726 PFDIIYSDLW 1755
P ++++DLW
Sbjct: 576 PLALLHADLW 585
Score = 70.9 bits (172), Expect = 4e-09
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = +3
Query: 27 DSGG*YKPIYTFLHSLGVHVRHPCPYTHQQNGKPERKHQHITEMGLSMLATANLPMKFWW 206
D+GG +K ++L + G+ + CPYT +QNG+ ERK +HI E GL++LATA+LP KFW
Sbjct: 646 DNGGEFKAFSSYLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWL 705
Query: 207 DAF 215
AF
Sbjct: 706 YAF 708
Score = 70.5 bits (171), Expect = 5e-09
Identities = 30/49 (61%), Positives = 40/49 (81%)
Frame = -2
Query: 674 WCDNISAISLASNPVFHARTKHIEVDVHFIREQVKRNEVDVRFLASKDQ 528
WCDN SA LA+NPVFHARTKHIE+D+HFIR+ V R ++ +++L S +Q
Sbjct: 1286 WCDNKSAAHLAANPVFHARTKHIEMDLHFIRDHVLRKQLVIQYLPSAEQ 1334
>ref|XP_012471034.1| PREDICTED: uncharacterized protein LOC105788615 [Gossypium raimondii]
Length = 348
Score = 137 bits (346), Expect = 1e-32
Identities = 99/319 (31%), Positives = 140/319 (43%), Gaps = 10/319 (3%)
Frame = +1
Query: 826 KPSCQICGKNNHIASKCFKRFDVNF--------PGINLSAAQAHVVTAPGFNPESQSTAG 981
K CQ+CGK H+ +C+ RFD + P +N+ A V T P +P +Q +
Sbjct: 58 KIQCQLCGKPGHLVDRCYHRFDSTYKSNNYRPPPQVNMCVAGPPVTTWPPSSPSAQWSTP 117
Query: 982 FQNSVSATSYDVNSSPGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHS 1161
VS G T S Y + + W+ DSGAT+H+T + ++
Sbjct: 118 GCTPVS----------GATQSQA---YLATPETVADNSWYPDSGATHHLTNSVTSIGEGG 164
Query: 1162 AYTGPDKLTIGNGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDN 1341
AY GP K+ +GNGS L + G +L VP ITKNLLS+SKF KDN
Sbjct: 165 AYKGPGKVFVGNGSALPVMSTGQSSLLTRSRPLFMRS--LLLVPGITKNLLSVSKFAKDN 222
Query: 1342 GVYVEFHFDSCLVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQST 1521
V EF C V D T VLL+G+ GLY+L LN A ST
Sbjct: 223 QVMFEFFPTQCQVHDLRTREVLLQGSEHQGLYRLHLNKSTA-------------APVSST 269
Query: 1522 PLYSFVSSVD-NVNLWQKRLGHPCNKVLS-IVXXXXXXXXXXXXXNFCDAYKMGKIHNMH 1695
F +++ +++W RLGHPC VL+ + C A +GK +
Sbjct: 270 SAQCFTTTMKLPLSVWHSRLGHPCQAVLTKALARCNIQATDINKMVDCIACHLGKERKLP 329
Query: 1696 FPTVESKATAPFDIIYSDL 1752
F + TAP ++ +D+
Sbjct: 330 FVKSSTVYTAPLQLVIADV 348
>gb|KYP38888.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 546
Score = 141 bits (355), Expect = 2e-32
Identities = 110/333 (33%), Positives = 152/333 (45%), Gaps = 26/333 (7%)
Frame = +1
Query: 835 CQICGKNNHIASKCFKRFDVNF----PGINLSAAQAHVVTAP--GFNP---ESQST---A 978
CQ+C + HIAS C+ RFD NF P N A T P G+NP +SQS A
Sbjct: 191 CQVCHRYGHIASTCYYRFDSNFVPNLPFDNSFPANTST-THPVFGYNPSPFQSQSAPRPA 249
Query: 979 GFQNSVSA-------TSYDVNSSPGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITAD 1137
F N V S SPG + A S+SS G W+ DSGA+NH+T
Sbjct: 250 NFSNGVLGPRPPNPNASLAYLISPGNLHTSASALAMSSSSPG-TNIWYPDSGASNHVTNV 308
Query: 1138 LGNLSLHSAYTGPDKLTIGNGSQLLISHIGXXXXXXXXXXXXXXXXX-ILCVPDITKNLL 1314
N+ ++ + GPD++ IGNG L I+ G +L VP ITKN++
Sbjct: 309 SHNIQQYTPFEGPDQIVIGNGQGLPINSSGVTHFSSPLKPHISLTLHNLLYVPTITKNMI 368
Query: 1315 SISKFTKDNGVYVEFHFDSCLVKDTTTHRVLLRGTL-KDGLYQLDLNGLGAXXXXXXXXX 1491
S+S+F KDN V+ EFH + CLVK ++ LL G + DGLYQ
Sbjct: 369 SVSQFCKDNSVFFEFHSNFCLVKSQDSNETLLHGVVGPDGLYQF---------------- 412
Query: 1492 XXXXXXXQSTPLYSFVSSVDNVNL----WQKRLGHPCNKVL-SIVXXXXXXXXXXXXXNF 1656
Q + FV +V + ++ W RLGH N V+ S+ +F
Sbjct: 413 PSLLLPRQPPAVLPFVHTVSSNSVSYATWHSRLGHAHNDVIKSVFKLCNFPIINKSVSDF 472
Query: 1657 CDAYKMGKIHNMHFPTVESKATAPFDIIYSDLW 1755
C + +GK H + ++ PF++IYSDLW
Sbjct: 473 CTSCCLGKSHKLPSHLSKTVYHTPFELIYSDLW 505
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 143 bits (360), Expect = 3e-32
Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 2/312 (0%)
Frame = +1
Query: 826 KPSCQICGKNNHIASKCFKRFDVNFPGINLSAAQAHVVTAPGFNPESQSTAGFQNSVSAT 1005
KP CQ+CGK H A C+ RFD++F G Q+T
Sbjct: 286 KPQCQLCGKFGHTAQICYHRFDISFQG-------------------GQTT---------I 317
Query: 1006 SYDVNSSPGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTGPDKL 1185
S+ +N+ + P +SN+ A ++ W++DSGA++H+T +LGNL+ S YTG DK+
Sbjct: 318 SHSLNNG-NQNNIPAMVASASNNPA--DESWYLDSGASHHLTQNLGNLTSTSPYTGTDKV 374
Query: 1186 TIGNGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYVEFHF 1365
TIGNG L IS+IG + VP I+ NL+S++KF +N +EFH
Sbjct: 375 TIGNGKHLSISNIG--SKQLHSHTHSFRLKKVFHVPFISANLISVAKFCSENNALIEFHS 432
Query: 1366 DSCLVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPLYS-FVS 1542
++ VKD T VL +G L++GLY+ + ++ +S F S
Sbjct: 433 NAFFVKDLHTKMVLAQGKLENGLYKFPV----------FSNLKPYSSINNASAFHSQFSS 482
Query: 1543 SVDN-VNLWQKRLGHPCNKVLSIVXXXXXXXXXXXXXNFCDAYKMGKIHNMHFPTVESKA 1719
+V+N LW RLGH ++S V C ++ K H + A
Sbjct: 483 TVENKAELWHNRLGHASFDIVSKVMNTCNVASGKYKSFVCSDCQLAKSHRLPTQLSNFHA 542
Query: 1720 TAPFDIIYSDLW 1755
+ P +++Y+D+W
Sbjct: 543 SKPLELVYTDIW 554
Score = 84.0 bits (206), Expect = 3e-13
Identities = 37/66 (56%), Positives = 52/66 (78%)
Frame = -2
Query: 674 WCDNISAISLASNPVFHARTKHIEVDVHFIREQVKRNEVDVRFLASKDQLADILTKPVSI 495
W DNISA +A NPVFHARTKHIE+D+HFIR+QV R ++ ++F+ +++Q D+LTK ++
Sbjct: 1320 WYDNISAYHMAKNPVFHARTKHIEIDLHFIRDQVMRGKIQLQFVPTEEQPVDLLTKHLTS 1379
Query: 494 SRFKML 477
SRF L
Sbjct: 1380 SRFLSL 1385
Score = 76.6 bits (187), Expect = 6e-11
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = +3
Query: 3 TTFKVFQCDSGG*YKPIYTFLHSLGVHVRHPCPYTHQQNGKPERKHQHITEMGLSMLATA 182
T K Q D+GG ++ +FL ++G+ R CPY QNG+ ERKH+H+ E GL++L+ A
Sbjct: 607 TKIKCLQSDNGGEFRSFTSFLQAVGIAHRFSCPYNSXQNGRVERKHRHVVETGLALLSHA 666
Query: 183 NLPMKFWWDAF 215
+LPMK+W AF
Sbjct: 667 SLPMKYWHYAF 677
>gb|KYP59913.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 326
Score = 133 bits (335), Expect = 3e-31
Identities = 79/237 (33%), Positives = 115/237 (48%), Gaps = 3/237 (1%)
Frame = +1
Query: 1054 AGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTGPDKLTIGNGSQLLISHIGXX 1233
A ++ + + ++ QW+ DSGATNH+T DL NL YTG DK+ +GNG + I+H G
Sbjct: 6 AMFAGSQNMVYDDQWYPDSGATNHLTPDLNNLGSKIDYTGQDKIHMGNGQAIGINHTGTS 65
Query: 1234 XXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYVEFHFDSCLVKDTTTHRVLLR 1413
+L VP ITKNLLS+SKF KDN VYVE H + CLVK + LLR
Sbjct: 66 FFHTSMSSKVFTLKNLLHVPHITKNLLSVSKFCKDNEVYVEVHTNYCLVKSQDSKETLLR 125
Query: 1414 GTLKDGLYQLD-LNGLGAXXXXXXXXXXXXXXXXQSTPLYSFVSSVDNVNLWQKRLGHPC 1590
G LK+GLY D + L + Y ++ ++W RL H
Sbjct: 126 GNLKNGLYVFDEVQILKPDVYEDTVDPVPTNLTTLNVQRYR-----ESYDVWHNRLAHAS 180
Query: 1591 NKVLSIVXXXXXXXXXXXXXN--FCDAYKMGKIHNMHFPTVESKATAPFDIIYSDLW 1755
K++ +V + C + +GK H + F + +P +++YSD+W
Sbjct: 181 RKIVKVVMKTCNVPLPINNKDSIVCKSCCIGKSHTLPFSYSFTVYNSPLELVYSDVW 237
>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
Length = 1334
Score = 135 bits (341), Expect = 8e-30
Identities = 103/367 (28%), Positives = 152/367 (41%), Gaps = 5/367 (1%)
Frame = +1
Query: 670 HHQSPAAHVASNNGNFGKRFFTSDSGIARGNSFVPXXXXXXXXXXXXXXXXXKPSCQICG 849
HH S H AS++ N F R N +P +P CQ+CG
Sbjct: 250 HHPSRPQHQASSSSNRPPTRFHPQQ--PRNNHPIPSAHNKPHHLST------RPQCQLCG 301
Query: 850 KNNHIASKCFKRFDVNFPGIN-LSAAQAHVVTAPGFNPESQSTAGFQNSVSATSYDVNSS 1026
K H A KC+ RFD+N+ G N + AQA F +++ A + D
Sbjct: 302 KFGHTAIKCYHRFDINYQGNNGVPLAQAP----------------FSHAMXAAAPD---- 341
Query: 1027 PGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTGPDKLTIGNGSQ 1206
H+ WF D+GAT+H++ LS Y+G D++TIG+G+
Sbjct: 342 -------------------HQDSWFFDTGATHHLSHSAQTLSCVQPYSGTDQVTIGDGNS 382
Query: 1207 LLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYVEFHFDSCLVKD 1386
L I + G +L VP ++ NL+S+SKF DN V+ EFH VKD
Sbjct: 383 LPILNTGTKSFFFPSKTFSLNQ--VLHVPHLSTNLISVSKFCTDNAVFFEFHSSCFFVKD 440
Query: 1387 TTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPLYSFVS--SVDNVN 1560
T ++LL+G L+DGLY+ S+P +FV+ S +
Sbjct: 441 QVTKKILLKGWLRDGLYEFS----------------------SSSPPRAFVTTGSFSDGA 478
Query: 1561 LWQKRLGHPCNKVLSIVXXXXXXXXXXXXXNF--CDAYKMGKIHNMHFPTVESKATAPFD 1734
+W RLGHP +LS C + K H++ + S A+ P
Sbjct: 479 IWHSRLGHPAVPILSKALASCNPSVTLQINKIAPCIICPLAKSHSLPYSLSSSHASHPLA 538
Query: 1735 IIYSDLW 1755
+I++DLW
Sbjct: 539 LIHTDLW 545
Score = 65.5 bits (158), Expect = 2e-07
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = +3
Query: 3 TTFKVFQCDSGG*YKPIYTFLHSLGVHVRHPCPYTHQQNGKPERKHQHITEMGLSMLATA 182
TT K Q D+GG + +L + G+ + CP+T QQNG+ ERK +H+ E GL+++A +
Sbjct: 598 TTIKCIQSDNGGEFLAFKPYLEAHGILHQFSCPHTPQQNGRAERKIRHLVETGLALMAQS 657
Query: 183 NLPMKFWWDAF 215
LP K+W AF
Sbjct: 658 FLPSKYWTYAF 668
>emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera]
Length = 1083
Score = 133 bits (335), Expect = 4e-29
Identities = 93/316 (29%), Positives = 139/316 (43%), Gaps = 6/316 (1%)
Frame = +1
Query: 826 KPSCQICGKNNHIASKCFKRFDVNFPGINLSAAQAHVVTAPGFNPESQSTAGFQNSVSAT 1005
KP CQ+CGK HI C+ RFD+++ S S S AG N +
Sbjct: 182 KPQCQLCGKFGHIVQICYXRFDISYQSSQXSNT-------------SPSNAGNPNXI--- 225
Query: 1006 SYDVNSSPGTTDSPCFAGYSSNSSAGHEQQWFVDSGATNHITADLGNLSLHSAYTGPDKL 1185
P S+N + + W++DSGA +H+T +GNL+ S YTG DK+
Sbjct: 226 -------------PAMVASSNNLA---DDTWYLDSGANHHLTQSVGNLTSSSPYTGTDKV 269
Query: 1186 TIGNGSQLLISHIGXXXXXXXXXXXXXXXXXILCVPDITKNLLSISKFTKDNGVYVEFHF 1365
TIGNG L IS+ G + VP I+ NL+S+ KF DN +EF
Sbjct: 270 TIGNGKHLSISNTG--SHRLLSDSHSFHLKKVFHVPFISANLISVVKFCSDNNSLIEFRS 327
Query: 1366 DSCLVKDTTTHRVLLRGTLKDGLYQLDLNGLGAXXXXXXXXXXXXXXXXQSTPLYSFVSS 1545
+S VKD T +VL +G L++GLY+ + S+ YS SS
Sbjct: 328 NSFFVKDLHTKKVLAQGKLENGLYRFPV---------LNNKKVAFVGATNSSTFYSHNSS 378
Query: 1546 V--DNVNLWQKRLGHPCNKVLSIV----XXXXXXXXXXXXXNFCDAYKMGKIHNMHFPTV 1707
+ + V LW RLGH +++ + C + ++ K H +
Sbjct: 379 IFDNKVKLWHYRLGHASTDIVTQIMQSCNVSFEKNKNXVCSTXCSSCQLAKSHRLPTHLS 438
Query: 1708 ESKATAPFDIIYSDLW 1755
S A+ P +++++DLW
Sbjct: 439 LSCASKPLELVHTDLW 454
Score = 83.6 bits (205), Expect = 4e-13
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = -2
Query: 674 WCDNISAISLASNPVFHARTKHIEVDVHFIREQVKRNEVDVRFLASKDQLADILTKPVSI 495
W DNISA +A NPVFHARTKHIE+D+HFI +QV R ++ + F+ ++DQ AD+LTK ++
Sbjct: 988 WYDNISAYHMAKNPVFHARTKHIEIDLHFIXDQVIRGKIQLHFVPTEDQPADLLTKHLTS 1047
Query: 494 SRFKML 477
SRF L
Sbjct: 1048 SRFLSL 1053