BLASTX nr result

ID: Rehmannia27_contig00041178 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00041178
         (510 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AMP82929.1| LRR receptor-like serine/threonine-protein kinase...   176   5e-48
ref|XP_011095177.1| PREDICTED: transcription termination factor ...   175   1e-47
ref|XP_012832310.1| PREDICTED: DNA repair protein RAD16 isoform ...   171   3e-46
ref|XP_012832312.1| PREDICTED: DNA repair protein RAD16 isoform ...   107   3e-24
gb|EPS68824.1| chromatin remodeling complex subunit, partial [Ge...    77   2e-13
emb|CDP04863.1| unnamed protein product [Coffea canephora]             66   1e-09

>gb|AMP82929.1| LRR receptor-like serine/threonine-protein kinase [Catalpa bungei]
          Length = 1055

 Score =  176 bits (445), Expect = 5e-48
 Identities = 97/162 (59%), Positives = 115/162 (70%), Gaps = 4/162 (2%)
 Frame = -1

Query: 474 MPEHVDPEDSILKFTQRRAIFGGILDCLRRFSFVVSSAFGYSSELVSLRGNNPFVAMAXX 295
           MP+HVDP D ILKF++   IFGGILDCLRR S  V S FGYSSEL+S  GN+ FVAMA  
Sbjct: 1   MPDHVDPVDGILKFSRGHNIFGGILDCLRRVSCEVISTFGYSSELISPPGNHSFVAMA-- 58

Query: 294 XXXXXXXXXXXXXXXXDLREIDNYRDESPVRDTASSISVRVLPSWAPSNHSNLTGRK--- 124
                           DLREIDNY+DESPVRDTASSI+ R+LP+WA   HSNLTG     
Sbjct: 59  --SADPIDISSTDSDSDLREIDNYKDESPVRDTASSINSRILPAWAHPTHSNLTGYDGVS 116

Query: 123 -DPSSSKRQIVHDEMSSRPHKRLNIAETVGASSSRIDESIYQ 1
              SSS+++IVHDE+SSRPHKR +I ET GASSSR+D +++Q
Sbjct: 117 IKESSSRKRIVHDEISSRPHKRPSIGETFGASSSRMDGNVHQ 158


>ref|XP_011095177.1| PREDICTED: transcription termination factor 2 [Sesamum indicum]
          Length = 1059

 Score =  175 bits (443), Expect = 1e-47
 Identities = 104/164 (63%), Positives = 117/164 (71%), Gaps = 6/164 (3%)
 Frame = -1

Query: 474 MPEHVDPEDSILKFTQRRAIFGGILDCLRRFSFVVSSAFGYSSEL-VSLRGNNPFVAMAX 298
           MP+HVD   SILKF++  +IFGGILD LRRFS VVSSAF YSSEL V+   N+   AMA 
Sbjct: 1   MPDHVD---SILKFSRGHSIFGGILDYLRRFSCVVSSAFVYSSELLVNAPSNHSLAAMAS 57

Query: 297 XXXXXXXXXXXXXXXXXDLREIDNYRDESPVRDTASSISVRVLPSWAPSNHSNLTG---- 130
                             LREIDNYRDESPVRDTASSI+ R+LPSWA S HSNLTG    
Sbjct: 58  VDPIDISSTDSDSD----LREIDNYRDESPVRDTASSINSRILPSWASSAHSNLTGYNGL 113

Query: 129 -RKDPSSSKRQIVHDEMSSRPHKRLNIAETVGASSSRIDESIYQ 1
            RKDPSSSKRQIV+DEM SRPHKRLN AETVGA+SS +D ++ Q
Sbjct: 114 SRKDPSSSKRQIVYDEMPSRPHKRLNTAETVGAASSWMDGNVKQ 157


>ref|XP_012832310.1| PREDICTED: DNA repair protein RAD16 isoform X1 [Erythranthe
           guttata] gi|848863079|ref|XP_012832311.1| PREDICTED: DNA
           repair protein RAD16 isoform X1 [Erythranthe guttata]
          Length = 1057

 Score =  171 bits (432), Expect = 3e-46
 Identities = 97/161 (60%), Positives = 115/161 (71%), Gaps = 3/161 (1%)
 Frame = -1

Query: 474 MPEHVDPEDSILKFTQRRAIFGGILDCLRRFSFVVSSAFGYSSELVSLRGNNPFVAMAXX 295
           MP+HVDP D+ILKF++R AIFGGILD LRRFS+VVSSAFG S EL+S   N+ F AM   
Sbjct: 1   MPDHVDPVDNILKFSRRHAIFGGILDYLRRFSYVVSSAFGQSIELLSPTHNSSFEAM--- 57

Query: 294 XXXXXXXXXXXXXXXXDLREIDNYRDESPVRDTASSISVRVLPSWAPSNHS-NLTG--RK 124
                           DLREIDNYRDESP RDT SS++ R+LPSWA S HS   TG  RK
Sbjct: 58  -DSVGPIDISSTDSDSDLREIDNYRDESPERDTLSSMNSRILPSWASSTHSTGQTGLSRK 116

Query: 123 DPSSSKRQIVHDEMSSRPHKRLNIAETVGASSSRIDESIYQ 1
           DPSSSKR  V++ +S RPHKRLNIAET G S++R DE++Y+
Sbjct: 117 DPSSSKRPNVNNGISPRPHKRLNIAETAGVSNTRTDENVYK 157


>ref|XP_012832312.1| PREDICTED: DNA repair protein RAD16 isoform X2 [Erythranthe
           guttata]
          Length = 1001

 Score =  107 bits (268), Expect = 3e-24
 Identities = 56/84 (66%), Positives = 67/84 (79%), Gaps = 3/84 (3%)
 Frame = -1

Query: 243 LREIDNYRDESPVRDTASSISVRVLPSWAPSNHSN-LTG--RKDPSSSKRQIVHDEMSSR 73
           LREIDNYRDESP RDT SS++ R+LPSWA S HS   TG  RKDPSSSKR  V++ +S R
Sbjct: 18  LREIDNYRDESPERDTLSSMNSRILPSWASSTHSTGQTGLSRKDPSSSKRPNVNNGISPR 77

Query: 72  PHKRLNIAETVGASSSRIDESIYQ 1
           PHKRLNIAET G S++R DE++Y+
Sbjct: 78  PHKRLNIAETAGVSNTRTDENVYK 101


>gb|EPS68824.1| chromatin remodeling complex subunit, partial [Genlisea aurea]
          Length = 570

 Score = 77.0 bits (188), Expect = 2e-13
 Identities = 43/78 (55%), Positives = 54/78 (69%)
 Frame = -1

Query: 243 LREIDNYRDESPVRDTASSISVRVLPSWAPSNHSNLTGRKDPSSSKRQIVHDEMSSRPHK 64
           LREIDNY D+SPVRD ASS   RVLP W  S++++L    D SSSKR+IV+D MS    K
Sbjct: 15  LREIDNYTDKSPVRDAASSGGSRVLPPWPVSSNNDLA---DVSSSKRKIVNDGMSPTTSK 71

Query: 63  RLNIAETVGASSSRIDES 10
           R NI +T+G +SS  + S
Sbjct: 72  RQNIGKTIGTTSSMTNGS 89


>emb|CDP04863.1| unnamed protein product [Coffea canephora]
          Length = 345

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 54/153 (35%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
 Frame = -1

Query: 474 MPEHVDPEDSILKFTQRRAIFGGILDCLRR-FSFVVSSAFGYSSELVSLRGNNPFVAMAX 298
           M +H DP    +  T++  ++    + L R    VV S FG SS+LV  R N     MA 
Sbjct: 1   MSDHGDPLHFGVDSTKKTWLYWPFAELLLRPLRRVVGSLFGSSSKLVFARENPHSAGMAS 60

Query: 297 XXXXXXXXXXXXXXXXXDLREIDNYRDESPVRDTASSISVRVLPSWAPSNHSNLTGRKDP 118
                             LREID Y DESP+RD+A+S + R LP+WA S+ SN+ GR   
Sbjct: 61  VDPIDISSSDDSI-----LREIDEYFDESPLRDSATSSNARSLPNWAFSSSSNMAGRGST 115

Query: 117 SSSK-RQIVHDEMSSRPHKRLNIAETVGASSSR 22
           SSS  R +    M S  +  +N   +  ASS +
Sbjct: 116 SSSNARTLPSWAMPSPSNTAVNGGPSRTASSPK 148


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