BLASTX nr result

ID: Rehmannia27_contig00040595 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00040595
         (1141 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011102135.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-12
gb|EYU37193.1| hypothetical protein MIMGU_mgv1a021143mg [Erythra...    77   8e-12
ref|XP_012837736.1| PREDICTED: pentatricopeptide repeat-containi...    77   9e-12
ref|XP_004250478.1| PREDICTED: pentatricopeptide repeat-containi...    59   8e-06

>ref|XP_011102135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Sesamum indicum]
          Length = 588

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 56/149 (37%), Positives = 78/149 (52%), Gaps = 8/149 (5%)
 Frame = +1

Query: 196 FASVLGALGKEKEIQGGMRFHCLIMKIRFELLYLFQIQYWIFTEKLATLRSPTRL----- 360
           FA+VLGA GKEKEIQGG + HC I+K+ FE           F  K+  L    ++     
Sbjct: 247 FAAVLGAFGKEKEIQGGAQLHCSIIKMGFESFTFVCNAALDFYAKIDCLDESFKIFCGMD 306

Query: 361 ---LMRWICMILLAGML*FWMRGYK*F*KKPLYLF*NMILEGFSP*SFDVF*SLTIYSNL 531
              ++ W  +I  AG +     G+    +  +    +M+L+GF P   D++   T    L
Sbjct: 307 VNDIVSWNALI--AGYV---NSGHY---EAAIGFIRSMLLQGFHP---DIY---TYSILL 352

Query: 532 *PFGDLPETVWGEQTHCCVLKPGLSSKVV 618
              GDLP T WG+QTHCC++KPGL S VV
Sbjct: 353 SVCGDLPATEWGKQTHCCIIKPGLDSNVV 381


>gb|EYU37193.1| hypothetical protein MIMGU_mgv1a021143mg [Erythranthe guttata]
          Length = 605

 Score = 77.0 bits (188), Expect = 8e-12
 Identities = 55/149 (36%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
 Frame = +1

Query: 196 FASVLGALGKEKEIQGGMRFHCLIMKIRFELLYLFQIQYWIFTEKLATLRSPTRL----- 360
           FASVLGALG+EKE + G++ HCLI+K+ F+   L       F  K+  L    +      
Sbjct: 264 FASVLGALGREKETRHGIQIHCLIIKLGFQSFTLVSNATSDFYAKIGCLDESFKTFCEME 323

Query: 361 ---LMRWICMILLAGML*FWMRGYK*F*KKPLYLF*NMILEGFSP*SFDVF*SLTIYSNL 531
              ++ W    L+AG L +         +  +    NM+L+GF P  +      T  S L
Sbjct: 324 VHDIVSW--NTLIAGFLNYGRY------ELAIKFIENMLLDGFDPNIY------TYSSIL 369

Query: 532 *PFGDLPETVWGEQTHCCVLKPGLSSKVV 618
              GDLP   WG+QTHC V+KPGL S VV
Sbjct: 370 SVCGDLPAAEWGKQTHCRVIKPGLDSNVV 398


>ref|XP_012837736.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Erythranthe guttata]
          Length = 648

 Score = 77.0 bits (188), Expect = 9e-12
 Identities = 55/149 (36%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
 Frame = +1

Query: 196 FASVLGALGKEKEIQGGMRFHCLIMKIRFELLYLFQIQYWIFTEKLATLRSPTRL----- 360
           FASVLGALG+EKE + G++ HCLI+K+ F+   L       F  K+  L    +      
Sbjct: 307 FASVLGALGREKETRHGIQIHCLIIKLGFQSFTLVSNATSDFYAKIGCLDESFKTFCEME 366

Query: 361 ---LMRWICMILLAGML*FWMRGYK*F*KKPLYLF*NMILEGFSP*SFDVF*SLTIYSNL 531
              ++ W    L+AG L +         +  +    NM+L+GF P  +      T  S L
Sbjct: 367 VHDIVSW--NTLIAGFLNYGRY------ELAIKFIENMLLDGFDPNIY------TYSSIL 412

Query: 532 *PFGDLPETVWGEQTHCCVLKPGLSSKVV 618
              GDLP   WG+QTHC V+KPGL S VV
Sbjct: 413 SVCGDLPAAEWGKQTHCRVIKPGLDSNVV 441


>ref|XP_004250478.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Solanum lycopersicum]
          Length = 702

 Score = 58.5 bits (140), Expect = 8e-06
 Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
 Frame = +1

Query: 196 FASVLGALGKEKEIQGGMRFHCLIMKIRFE-------LLYLFQIQYWIFTEKLATLRSPT 354
           F+SV+GA    KE++ G + HC I+K+ F+        L  F  +  +F E L   +   
Sbjct: 308 FSSVIGAFADVKEVRVGKQIHCRIVKMGFDSFSFVCNALLDFYSKSDLFEESLKLFQEMK 367

Query: 355 RL-LMRWICMILLAGML*FWMRGYK*F*KKPLYLF*NMILEGFSP*SFDVF*SLTIYSNL 531
              ++ W    L+AG +      Y+    + L     M+LEGF P       SL  YS++
Sbjct: 368 EQDVVSW--NTLIAGCV--SSSRYE----EALRFLREMLLEGFEP-------SLYTYSSI 412

Query: 532 *PF-GDLPETVWGEQTHCCVLKPGLSSKVVAE 624
               GDLP   WG+QTHC VLK  L S VV +
Sbjct: 413 LSICGDLPAIEWGKQTHCRVLKSRLDSNVVVD 444


Top