BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00040561
         (504 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012844594.1| PREDICTED: general transcription factor IIH ...    89   6e-18
gb|EPS66674.1| hypothetical protein M569_08097 [Genlisea aurea]        87   3e-17
gb|KVH96938.1| Transcription factor TFIIH subunit p52/Tfb2 [Cyna...    83   8e-16
ref|XP_010100539.1| General transcription factor IIH subunit 4 [...    83   9e-16
ref|XP_010316742.1| PREDICTED: general transcription factor IIH ...    81   3e-15
ref|XP_007213816.1| hypothetical protein PRUPE_ppa005553mg [Prun...    82   3e-15
ref|XP_010316741.1| PREDICTED: general transcription factor IIH ...    81   3e-15
ref|XP_006347058.1| PREDICTED: general transcription factor IIH ...    81   5e-15
ref|XP_004232855.1| PREDICTED: general transcription factor IIH ...    81   5e-15
ref|XP_009631137.1| PREDICTED: general transcription factor IIH ...    81   5e-15
ref|XP_010316740.1| PREDICTED: general transcription factor IIH ...    81   5e-15
ref|XP_009631136.1| PREDICTED: general transcription factor IIH ...    81   5e-15
emb|CBI25875.3| unnamed protein product [Vitis vinifera]               79   5e-15
ref|XP_009338076.1| PREDICTED: general transcription factor IIH ...    81   6e-15
ref|XP_004505045.1| PREDICTED: general transcription factor IIH ...    81   6e-15
ref|XP_009762927.1| PREDICTED: general transcription factor IIH ...    81   6e-15
ref|XP_009631135.1| PREDICTED: general transcription factor IIH ...    81   6e-15
ref|XP_009338006.1| PREDICTED: general transcription factor IIH ...    81   6e-15
ref|XP_008778436.1| PREDICTED: general transcription factor IIH ...    80   7e-15
ref|XP_009392829.1| PREDICTED: general transcription factor IIH ...    80   8e-15

>ref|XP_012844594.1| PREDICTED: general transcription factor IIH subunit 4 [Erythranthe
           guttata] gi|604320464|gb|EYU31406.1| hypothetical
           protein MIMGU_mgv1a006192mg [Erythranthe guttata]
          Length = 453

 Score = 89.4 bits (220), Expect = 6e-18
 Identities = 44/47 (93%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 GVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           GVDT DLISFLLELSFHVTGKAYNLNTLSDIQRNI+KDL DLGLVKL
Sbjct: 221 GVDTADLISFLLELSFHVTGKAYNLNTLSDIQRNILKDLTDLGLVKL 267


>gb|EPS66674.1| hypothetical protein M569_08097 [Genlisea aurea]
          Length = 452

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 42/49 (85%), Positives = 46/49 (93%)
 Frame = -3

Query: 148 DLGVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           D GVDT DL+SF+LELSFH TGKAYNLNTLSD+QR+IIKDLADLGLVKL
Sbjct: 219 DRGVDTADLLSFMLELSFHYTGKAYNLNTLSDVQRDIIKDLADLGLVKL 267


>gb|KVH96938.1| Transcription factor TFIIH subunit p52/Tfb2 [Cynara cardunculus
           var. scolymus]
          Length = 406

 Score = 83.2 bits (204), Expect = 8e-16
 Identities = 39/49 (79%), Positives = 45/49 (91%)
 Frame = -3

Query: 148 DLGVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           D GVD+ DLISFLLELSFHVTG+AYN+NTL+DIQR  +KDLADLGL+KL
Sbjct: 219 DRGVDSADLISFLLELSFHVTGEAYNMNTLTDIQRTTVKDLADLGLIKL 267


>ref|XP_010100539.1| General transcription factor IIH subunit 4 [Morus notabilis]
           gi|587894254|gb|EXB82782.1| General transcription factor
           IIH subunit 4 [Morus notabilis]
          Length = 431

 Score = 83.2 bits (204), Expect = 9e-16
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = -3

Query: 157 RFMDLGVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           +F+D GVD  DLISFLLELSFHVTG+AYN+++L+DIQR  IKDLADLGLVKL
Sbjct: 195 QFLDRGVDPADLISFLLELSFHVTGEAYNISSLTDIQRETIKDLADLGLVKL 246


>ref|XP_010316742.1| PREDICTED: general transcription factor IIH subunit 4 isoform X4
           [Solanum lycopersicum]
          Length = 365

 Score = 81.3 bits (199), Expect = 3e-15
 Identities = 38/47 (80%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 GVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           GVD+ DLI+FLLELSFHVTGKAYN NT++D+QR+IIKDL+DLGLVKL
Sbjct: 221 GVDSADLIAFLLELSFHVTGKAYNTNTITDLQRSIIKDLSDLGLVKL 267


>ref|XP_007213816.1| hypothetical protein PRUPE_ppa005553mg [Prunus persica]
           gi|462409681|gb|EMJ15015.1| hypothetical protein
           PRUPE_ppa005553mg [Prunus persica]
          Length = 455

 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 38/47 (80%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 GVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           GVD+ DLISFLLELSFHVTG+AYN+NTL+++Q+N IKDLADLGLVKL
Sbjct: 220 GVDSADLISFLLELSFHVTGEAYNINTLTEVQKNTIKDLADLGLVKL 266


>ref|XP_010316741.1| PREDICTED: general transcription factor IIH subunit 4 isoform X3
           [Solanum lycopersicum]
          Length = 375

 Score = 81.3 bits (199), Expect = 3e-15
 Identities = 38/47 (80%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 GVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           GVD+ DLI+FLLELSFHVTGKAYN NT++D+QR+IIKDL+DLGLVKL
Sbjct: 97  GVDSADLIAFLLELSFHVTGKAYNTNTITDLQRSIIKDLSDLGLVKL 143


>ref|XP_006347058.1| PREDICTED: general transcription factor IIH subunit 4 [Solanum
           tuberosum]
          Length = 453

 Score = 81.3 bits (199), Expect = 5e-15
 Identities = 38/47 (80%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 GVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           GVD+ DLI+FLLELSFHVTGKAYN NT++D+QR+IIKDL+DLGLVKL
Sbjct: 221 GVDSADLIAFLLELSFHVTGKAYNTNTITDLQRSIIKDLSDLGLVKL 267


>ref|XP_004232855.1| PREDICTED: general transcription factor IIH subunit 4 isoform X2
           [Solanum lycopersicum] gi|970009946|ref|XP_015065870.1|
           PREDICTED: general transcription factor IIH subunit 4
           [Solanum pennellii]
          Length = 453

 Score = 81.3 bits (199), Expect = 5e-15
 Identities = 38/47 (80%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 GVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           GVD+ DLI+FLLELSFHVTGKAYN NT++D+QR+IIKDL+DLGLVKL
Sbjct: 221 GVDSADLIAFLLELSFHVTGKAYNTNTITDLQRSIIKDLSDLGLVKL 267


>ref|XP_009631137.1| PREDICTED: general transcription factor IIH subunit 4-like isoform
           X3 [Nicotiana tomentosiformis]
          Length = 386

 Score = 80.9 bits (198), Expect = 5e-15
 Identities = 39/47 (82%), Positives = 44/47 (93%)
 Frame = -3

Query: 142 GVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           GVD+ DLI+FLLELSFHVTGKAYN NTL+DIQR+I KDL+DLGLVKL
Sbjct: 221 GVDSADLIAFLLELSFHVTGKAYNTNTLTDIQRSITKDLSDLGLVKL 267


>ref|XP_010316740.1| PREDICTED: general transcription factor IIH subunit 4 isoform X1
           [Solanum lycopersicum]
          Length = 499

 Score = 81.3 bits (199), Expect = 5e-15
 Identities = 38/47 (80%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 GVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           GVD+ DLI+FLLELSFHVTGKAYN NT++D+QR+IIKDL+DLGLVKL
Sbjct: 221 GVDSADLIAFLLELSFHVTGKAYNTNTITDLQRSIIKDLSDLGLVKL 267


>ref|XP_009631136.1| PREDICTED: general transcription factor IIH subunit 4-like isoform
           X2 [Nicotiana tomentosiformis]
          Length = 391

 Score = 80.9 bits (198), Expect = 5e-15
 Identities = 39/47 (82%), Positives = 44/47 (93%)
 Frame = -3

Query: 142 GVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           GVD+ DLI+FLLELSFHVTGKAYN NTL+DIQR+I KDL+DLGLVKL
Sbjct: 159 GVDSADLIAFLLELSFHVTGKAYNTNTLTDIQRSITKDLSDLGLVKL 205


>emb|CBI25875.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score = 79.3 bits (194), Expect = 5e-15
 Identities = 38/47 (80%), Positives = 42/47 (89%)
 Frame = -3

Query: 142 GVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           GVD  DLISFLLELSFHVTG+AYN+NTL++ QRN IKDL DLGLVKL
Sbjct: 3   GVDPADLISFLLELSFHVTGEAYNINTLTEFQRNTIKDLVDLGLVKL 49


>ref|XP_009338076.1| PREDICTED: general transcription factor IIH subunit 4 isoform X2
           [Pyrus x bretschneideri]
          Length = 426

 Score = 80.9 bits (198), Expect = 6e-15
 Identities = 38/47 (80%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 GVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           G+D+ DLISFLLELSFHVTG+AYN+NTL++ QRNIIKDLADLGL+KL
Sbjct: 220 GLDSADLISFLLELSFHVTGEAYNINTLNERQRNIIKDLADLGLIKL 266


>ref|XP_004505045.1| PREDICTED: general transcription factor IIH subunit 4 [Cicer
           arietinum]
          Length = 451

 Score = 80.9 bits (198), Expect = 6e-15
 Identities = 39/47 (82%), Positives = 43/47 (91%)
 Frame = -3

Query: 142 GVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           GVD  DLISF+LELSFHV G+AYN+NTL+D QRNIIKDLADLGLVKL
Sbjct: 220 GVDAGDLISFMLELSFHVIGEAYNINTLTDFQRNIIKDLADLGLVKL 266


>ref|XP_009762927.1| PREDICTED: general transcription factor IIH subunit 4 [Nicotiana
           sylvestris]
          Length = 453

 Score = 80.9 bits (198), Expect = 6e-15
 Identities = 39/47 (82%), Positives = 44/47 (93%)
 Frame = -3

Query: 142 GVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           GVD+ DLI+FLLELSFHVTGKAYN NTL+DIQR+I KDL+DLGLVKL
Sbjct: 221 GVDSADLIAFLLELSFHVTGKAYNTNTLTDIQRSITKDLSDLGLVKL 267


>ref|XP_009631135.1| PREDICTED: general transcription factor IIH subunit 4-like isoform
           X1 [Nicotiana tomentosiformis]
          Length = 453

 Score = 80.9 bits (198), Expect = 6e-15
 Identities = 39/47 (82%), Positives = 44/47 (93%)
 Frame = -3

Query: 142 GVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           GVD+ DLI+FLLELSFHVTGKAYN NTL+DIQR+I KDL+DLGLVKL
Sbjct: 221 GVDSADLIAFLLELSFHVTGKAYNTNTLTDIQRSITKDLSDLGLVKL 267


>ref|XP_009338006.1| PREDICTED: general transcription factor IIH subunit 4 isoform X1
           [Pyrus x bretschneideri]
          Length = 454

 Score = 80.9 bits (198), Expect = 6e-15
 Identities = 38/47 (80%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 GVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           G+D+ DLISFLLELSFHVTG+AYN+NTL++ QRNIIKDLADLGL+KL
Sbjct: 220 GLDSADLISFLLELSFHVTGEAYNINTLNERQRNIIKDLADLGLIKL 266


>ref|XP_008778436.1| PREDICTED: general transcription factor IIH subunit 4 isoform X2
           [Phoenix dactylifera]
          Length = 401

 Score = 80.5 bits (197), Expect = 7e-15
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = -3

Query: 148 DLGVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           D GVD TDLISFLLELSFH  G+AYNLNTL+D+Q++ IKDLADLGL+KL
Sbjct: 168 DRGVDPTDLISFLLELSFHTLGEAYNLNTLTDVQKHAIKDLADLGLIKL 216


>ref|XP_009392829.1| PREDICTED: general transcription factor IIH subunit 4 isoform X3
           [Musa acuminata subsp. malaccensis]
          Length = 451

 Score = 80.5 bits (197), Expect = 8e-15
 Identities = 40/49 (81%), Positives = 43/49 (87%)
 Frame = -3

Query: 148 DLGVDTTDLISFLLELSFHVTGKAYNLNTLSDIQRNIIKDLADLGLVKL 2
           D GVD TDLISFLLELSFH  G+AYNLNTL+D+QR  IKDLADLGLVKL
Sbjct: 218 DRGVDPTDLISFLLELSFHTLGEAYNLNTLTDVQRIAIKDLADLGLVKL 266