BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00039436
         (551 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP51629.1| Retrovirus-related Pol polyprotein from transposo...   181   3e-55
gb|KYP65704.1| Retrovirus-related Pol polyprotein from transposo...   187   2e-53
gb|KYP40999.1| Retrovirus-related Pol polyprotein from transposo...   186   1e-51
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo...   184   8e-51
gb|KYP51126.1| Retrovirus-related Pol polyprotein from transposo...   173   1e-50
gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposo...   182   3e-50
gb|KYP47160.1| Retrovirus-related Pol polyprotein from transposo...   169   2e-49
ref|XP_012435315.1| PREDICTED: uncharacterized protein LOC105761...   176   7e-49
gb|KYP42518.1| Retrovirus-related Pol polyprotein from transposo...   177   1e-48
gb|KYP70579.1| Retrovirus-related Pol polyprotein from transposo...   168   1e-48
gb|KYP54917.1| Retrovirus-related Pol polyprotein from transposo...   167   2e-48
gb|KYP47181.1| Retrovirus-related Pol polyprotein from transposo...   169   6e-48
gb|KYP76882.1| Retrovirus-related Pol polyprotein from transposo...   162   1e-47
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   174   2e-47
gb|KYP34124.1| Retrovirus-related Pol polyprotein from transposo...   164   2e-47
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo...   174   4e-47
gb|KYP40816.1| Retrovirus-related Pol polyprotein from transposo...   173   8e-47
gb|KYP64431.1| Retrovirus-related Pol polyprotein from transposo...   172   9e-47
ref|XP_010420948.1| PREDICTED: uncharacterized protein LOC104706...   171   1e-46
gb|KYP70978.1| Retrovirus-related Pol polyprotein from transposo...   164   1e-46

>gb|KYP51629.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 191

 Score =  181 bits (460), Expect = 3e-55
 Identities = 96/191 (50%), Positives = 117/191 (61%), Gaps = 15/191 (7%)
 Frame = +1

Query: 22  MIGFAKESGGLYHFQLSNVAC--------NLTTASVS---LWHARLGHASSKVLGFL--- 159
           MIG A    GLYH  ++   C        N  TA+ +   LWH RLGH S   L  L   
Sbjct: 1   MIGLASLKQGLYHLVINKEGCLPTFSSSANSLTANTNNKNLWHLRLGHLSGSRLNLLHEQ 60

Query: 160 -PHVNSTCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGPFGTPSHNGFKY 336
            P ++   N   ++CD+CH +KQK+ P+   TS     FDL+H DIWGPF  PS  G KY
Sbjct: 61  FPFISKHIN---ETCDICHLSKQKKFPYSISTSRATKMFDLIHMDIWGPFSKPSIYGHKY 117

Query: 337 FLTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDNGSEFSLPLFYA 516
           FLTI+DDFSR TWI LLK K+E + H + F  +++ QFH  IKILRSDNG EFSL  F+A
Sbjct: 118 FLTILDDFSRYTWIVLLKSKAEVQSHVQNFIALIENQFHTTIKILRSDNGPEFSLKNFFA 177

Query: 517 SNGIIHQTSCV 549
           S GIIHQTSCV
Sbjct: 178 SKGIIHQTSCV 188


>gb|KYP65704.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 603

 Score =  187 bits (476), Expect = 2e-53
 Identities = 100/199 (50%), Positives = 122/199 (61%), Gaps = 16/199 (8%)
 Frame = +1

Query: 1   QDMNTKKMIGFAKESGGLYHFQ---------------LSNVACNLTTASVSLWHARLGHA 135
           QD+ +KKMIGFA+    LY  Q               + N     TT+S  LWH RLGH 
Sbjct: 370 QDLTSKKMIGFAEVKNHLYILQRPSKDNSISACKSNSVLNAQLKATTSSFDLWHYRLGHP 429

Query: 136 SSKVLGFLP-HVNSTCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGPFGT 312
           S  VL  +  H       K  +CD C+F KQ RLPFP  TS +LS FDLVH DIWGP   
Sbjct: 430 SHVVLQIVKSHFPYVTYNKNITCDYCYFGKQARLPFPTSTSKSLSFFDLVHMDIWGPLAI 489

Query: 313 PSHNGFKYFLTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDNGSE 492
           P+ +G KYFLTIVDD+SR TWIY +K K ET+   + F + VQTQF K IK++RSDNG E
Sbjct: 490 PTIHGHKYFLTIVDDYSRHTWIYFMKSKGETRNLIQNFISYVQTQFTKHIKVIRSDNGVE 549

Query: 493 FSLPLFYASNGIIHQTSCV 549
           F++   YA+ GI+HQTSCV
Sbjct: 550 FAMDQLYATYGIVHQTSCV 568


>gb|KYP40999.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1029

 Score =  186 bits (473), Expect = 1e-51
 Identities = 97/198 (48%), Positives = 124/198 (62%), Gaps = 15/198 (7%)
 Frame = +1

Query: 1    QDMNTKKMIGFAKESGGLY------HFQLSNVACNLTTASV---------SLWHARLGHA 135
            Q+  T + IG AK   GLY      H   S++A    TASV         SLWH RLGH 
Sbjct: 435  QEHKTLRKIGIAKAQNGLYVMDFLTHKDSSSLA-TFNTASVTFTSKIDPSSLWHFRLGHP 493

Query: 136  SSKVLGFLPHVNSTCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGPFGTP 315
            S +    +       ++ F++CD CHF+KQK+LPF + T+++ +  DL+H DIWGP+ TP
Sbjct: 494  SGQCYSHIQKQYPFVSSSFNTCDFCHFSKQKKLPFNNSTTISANVLDLIHVDIWGPYATP 553

Query: 316  SHNGFKYFLTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDNGSEF 495
            S  G KYFLTIVDD SR TWI L++ K+ET+ H   F    +TQFHK IKI+RSDNG EF
Sbjct: 554  SVLGHKYFLTIVDDKSRFTWIRLMQNKNETRQHLLNFITFTETQFHKTIKIIRSDNGQEF 613

Query: 496  SLPLFYASNGIIHQTSCV 549
            ++P  YAS GIIHQ SCV
Sbjct: 614  NMPQLYASKGIIHQLSCV 631


>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1427

 Score =  184 bits (468), Expect = 8e-51
 Identities = 103/202 (50%), Positives = 122/202 (60%), Gaps = 19/202 (9%)
 Frame = +1

Query: 1    QDMNTKKMIGFAKESGGLYHFQL-----------SNVACNL----TTASVSLWHARLGHA 135
            QD+ +KK IG A+    LY  Q            SN   N     TT+S  LWH RLGH 
Sbjct: 439  QDLTSKKTIGLAEVKNHLYILQRPSKDNSISACKSNSVLNAQPKGTTSSFDLWHYRLGHP 498

Query: 136  SSKVLG----FLPHVNSTCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGP 303
            S  VL       P+V    N    +CD CHF KQ RLPFP  T+ +LS FDLVH DIWGP
Sbjct: 499  SHVVLQTVKRLFPYVTYNKNI---TCDYCHFGKQARLPFPTSTTKSLSCFDLVHMDIWGP 555

Query: 304  FGTPSHNGFKYFLTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDN 483
               PS +G KYFLTIVDD+SR TWIY +K K ET+   + F + VQTQF K IK+LRSDN
Sbjct: 556  LAIPSIHGHKYFLTIVDDYSRHTWIYFMKSKGETRNLIQNFISYVQTQFTKHIKVLRSDN 615

Query: 484  GSEFSLPLFYASNGIIHQTSCV 549
            G EF++   YA+ GI+HQTSCV
Sbjct: 616  GVEFAMDQLYATYGIVHQTSCV 637


>gb|KYP51126.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 289

 Score =  173 bits (438), Expect = 1e-50
 Identities = 90/195 (46%), Positives = 121/195 (62%), Gaps = 12/195 (6%)
 Frame = +1

Query: 1   QDMNTKKMIGFAKESGGLYHFQLSN--VACNLTTASVS------LWHARLGHAS----SK 144
           QD+ T KMIG A+   GLY  Q+S      NL  A+ S      LWH RLGH S    ++
Sbjct: 91  QDLTTMKMIGSAEALNGLYFMQVSKHQTQANLAEATSSSFPNTVLWHFRLGHISFSKMNQ 150

Query: 145 VLGFLPHVNSTCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGPFGTPSHN 324
           ++   P++ ++   K   CD+CHFA+Q+RLP+ D        FDL+H D+WG F T S  
Sbjct: 151 MISLYPYLQNS--NKRHICDICHFARQRRLPYSDSLHNASKPFDLLHLDVWGTFKTKSIQ 208

Query: 325 GFKYFLTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDNGSEFSLP 504
             KYFLTI+DD+SR  W+  LK KSET++H  +F  MV+TQF+  IK +R++NGS+F L 
Sbjct: 209 NHKYFLTILDDYSRYLWVIFLKHKSETEVHLRSFTQMVETQFNTTIKTIRTNNGSKFFLA 268

Query: 505 LFYASNGIIHQTSCV 549
            FY   GIIHQT+CV
Sbjct: 269 SFYRDKGIIHQTTCV 283


>gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1115

 Score =  182 bits (463), Expect = 3e-50
 Identities = 98/194 (50%), Positives = 119/194 (61%), Gaps = 11/194 (5%)
 Frame = +1

Query: 1   QDMNTKKMIGFAKESGGLYHFQL-------SNVACNLTTASVSLWHARLGHASSKVLGFL 159
           QDMNT KMIG A    GL+H  +       +N A      + +LWH RLGH SS  L  L
Sbjct: 152 QDMNTLKMIGSANLKEGLFHLDIGKERRSSTNNATATPINNSNLWHFRLGHLSSNRLNVL 211

Query: 160 ----PHVNSTCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGPFGTPSHNG 327
               P ++   N   + CDVCHFAKQK+L +   +S     FDL+H DIWGPF   S +G
Sbjct: 212 NQQFPFISKHSN---EVCDVCHFAKQKKLSYSPSSSRVSKIFDLIHMDIWGPFSKASIHG 268

Query: 328 FKYFLTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDNGSEFSLPL 507
            KYFLTI+DDFSR TW+ LLK KSE K H   F N+V+ Q+  K+K +RSDNG EF L  
Sbjct: 269 HKYFLTILDDFSRYTWVVLLKSKSEVKTHVHNFINLVENQYETKVKCIRSDNGPEFFLRD 328

Query: 508 FYASNGIIHQTSCV 549
           F+ S GIIHQTSCV
Sbjct: 329 FFNSKGIIHQTSCV 342


>gb|KYP47160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 284

 Score =  169 bits (429), Expect = 2e-49
 Identities = 93/199 (46%), Positives = 122/199 (61%), Gaps = 16/199 (8%)
 Frame = +1

Query: 1   QDMNTKKMIGFAKESGGLYHFQL-----SNVACNLTTASVS-------LWHARLGHASSK 144
           QD  T++MIG AK +  LY         SN  CN    S +       LWH RLGH S +
Sbjct: 2   QDPTTQRMIGLAKANQHLYLMHNPCVSHSNSICNSAFVSKTQNKNMFDLWHFRLGHPSYQ 61

Query: 145 VLGFL----PHVNSTCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGPFGT 312
           VL  +    P+V    NT    CD CH AKQ RLPFP   S + S F+LVH DIWGP   
Sbjct: 62  VLKIVKKHSPYVEFNDNTV---CDYCHLAKQSRLPFPVSNSKSFSCFELVHMDIWGPIAI 118

Query: 313 PSHNGFKYFLTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDNGSE 492
            S +G ++FLTIV+DFSR TW +L+K K+ET+     F  +++T+F+K+IK +R+DNGSE
Sbjct: 119 TSIHGHRFFLTIVNDFSRHTWTFLMKSKAETRKLIHNFVALIETRFNKRIKTIRTDNGSE 178

Query: 493 FSLPLFYASNGIIHQTSCV 549
           F +  FYA +GI+HQTSC+
Sbjct: 179 FLMHDFYAQHGILHQTSCI 197


>ref|XP_012435315.1| PREDICTED: uncharacterized protein LOC105761928 [Gossypium
           raimondii]
          Length = 601

 Score =  176 bits (445), Expect = 7e-49
 Identities = 93/187 (49%), Positives = 120/187 (64%), Gaps = 10/187 (5%)
 Frame = +1

Query: 19  KMIGFAKESGGLYHFQLS---------NVACNLTTASVSLWHARLGHAS-SKVLGFLPHV 168
           KM+G AK   GLY  +LS          V   ++ +  SLWH RLGH S S++     ++
Sbjct: 355 KMMGTAKVFNGLYVLELSVLPTPSPSTKVFAVMSVSPASLWHHRLGHLSDSRLKSLYSNI 414

Query: 169 NSTCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGPFGTPSHNGFKYFLTI 348
           +S+       C  CH AKQK+L FP   SV+ + FDL+H DIWGP G  S  G +YFLTI
Sbjct: 415 SSSPFVANLPCKTCHLAKQKKLVFPLSQSVSKALFDLIHVDIWGPNGIVSIIGHRYFLTI 474

Query: 349 VDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDNGSEFSLPLFYASNGI 528
           VDDFS  TWI LLK KSE + H  +F ++V+TQF  KIK++R+DNG EF++P FYASN I
Sbjct: 475 VDDFSSFTWIVLLKSKSEARFHLLSFRSLVETQFPLKIKVIRTDNGPEFTIPSFYASNRI 534

Query: 529 IHQTSCV 549
           +HQTSCV
Sbjct: 535 LHQTSCV 541


>gb|KYP42518.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 769

 Score =  177 bits (449), Expect = 1e-48
 Identities = 91/192 (47%), Positives = 119/192 (61%), Gaps = 9/192 (4%)
 Frame = +1

Query: 1   QDMNTKKMIGFAKESGGLYHFQLSNVACNLTTAS---VSLWHARLGHASSKVLGFLPHVN 171
           QD   K+MIGF +   G+Y F       +L  +S    +LWHAR+GH S +VL  L  + 
Sbjct: 384 QDQTRKRMIGFGRLCDGIYIFTQQVGGYSLVASSGDITTLWHARMGHPSDQVLSKLSTII 443

Query: 172 S---TCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGPFGTPSHNGFKYFL 342
           S     N K + CD+CH +KQ RLPF    +     FDL+HCD+WG + T SHNG  YFL
Sbjct: 444 SFSFNANNKMECCDICHRSKQCRLPFSLNYNKVSKVFDLIHCDLWGKYHTASHNGSHYFL 503

Query: 343 TIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDNGSEF---SLPLFY 513
           TIVDDF+R  WIYLLK K+ET      ++ MVQTQF  K+K++RSDNG++F    +  F+
Sbjct: 504 TIVDDFTRAVWIYLLKDKTETTNVIINYYRMVQTQFDTKVKVVRSDNGTKFVNSKIHSFF 563

Query: 514 ASNGIIHQTSCV 549
              GI+HQTSCV
Sbjct: 564 QEVGILHQTSCV 575


>gb|KYP70579.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 288

 Score =  168 bits (425), Expect = 1e-48
 Identities = 92/192 (47%), Positives = 116/192 (60%), Gaps = 16/192 (8%)
 Frame = +1

Query: 22  MIGFAKESGGLYHF------------QLSNVACNLTTASVS-LWHARLGHASSKVLGFLP 162
           MIGFA+E  GLY+             Q++  + + +T S + LWH RLGH S   L  L 
Sbjct: 1   MIGFAEEVDGLYYLIKTCQKPTTNTSQINTSSTHNSTYSPNALWHFRLGHISESRLNMLS 60

Query: 163 HVNS---TCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGPFGTPSHNGFK 333
            + S    CN K   CDVCHFAKQ++LPF    S T   F+L+H D+WGP+   + N  +
Sbjct: 61  ELYSFINNCNHKH-VCDVCHFAKQRKLPFSVSNSKTSRPFELLHLDLWGPYSIQTVNHQR 119

Query: 334 YFLTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDNGSEFSLPLFY 513
           YFLTIVDD+SR TW+ LLK KS+T+     F  +V  QFH KIK +R+DNG EF L  FY
Sbjct: 120 YFLTIVDDYSRYTWVILLKNKSQTEQSLRHFSKLVDRQFHSKIKTIRTDNGPEFFLHSFY 179

Query: 514 ASNGIIHQTSCV 549
              GIIHQTSCV
Sbjct: 180 QEEGIIHQTSCV 191


>gb|KYP54917.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 277

 Score =  167 bits (422), Expect = 2e-48
 Identities = 97/203 (47%), Positives = 115/203 (56%), Gaps = 20/203 (9%)
 Frame = +1

Query: 1   QDMNTKKMIGFAKESGGLY-------------HFQLSNVACNLTTASVSLWHARLGHASS 141
           QDM T KMI  A     LY             H   S +A   T     LWH RLGH S 
Sbjct: 48  QDMTTLKMIERADVQNCLYVLSQPTKLQAPNQHIINSIIAKKPTVPFFDLWHFRLGHPSI 107

Query: 142 KVLGFLPHVNSTCN----TKFDS---CDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWG 300
            VL       + C      KFDS   CD CH AKQ +LPFP     + + FDL+H DIWG
Sbjct: 108 LVL------QNICKHFPFIKFDSMKVCDYCHLAKQSKLPFPPGIHKSSAPFDLIHMDIWG 161

Query: 301 PFGTPSHNGFKYFLTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSD 480
           P    S  G KYFLTIVDDF+R TW++L+K K ET++  + F  +VQTQF+K+IKILR+D
Sbjct: 162 PLAISSIQGHKYFLTIVDDFTRHTWLFLMKSKHETRILVKNFITLVQTQFNKRIKILRTD 221

Query: 481 NGSEFSLPLFYASNGIIHQTSCV 549
           NG EFS+   Y   GIIHQTSCV
Sbjct: 222 NGLEFSMSSIYQDLGIIHQTSCV 244


>gb|KYP47181.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 417

 Score =  169 bits (429), Expect = 6e-48
 Identities = 93/199 (46%), Positives = 122/199 (61%), Gaps = 16/199 (8%)
 Frame = +1

Query: 1   QDMNTKKMIGFAKESGGLYHFQL-----SNVACNLTTASVS-------LWHARLGHASSK 144
           QD  T++MIG AK +  LY         SN  CN    S +       LWH RLGH S +
Sbjct: 135 QDPTTQRMIGLAKANQHLYLMHNPCVSHSNSICNSAFVSKTQNKNMFDLWHFRLGHPSYQ 194

Query: 145 VLGFL----PHVNSTCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGPFGT 312
           VL  +    P+V    NT    CD CH AKQ RLPFP   S + S F+LVH DIWGP   
Sbjct: 195 VLKIVKKHSPYVEFNDNTV---CDYCHLAKQSRLPFPVSNSKSFSCFELVHMDIWGPIAI 251

Query: 313 PSHNGFKYFLTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDNGSE 492
            S +G ++FLTIV+DFSR TW +L+K K+ET+     F  +++T+F+K+IK +R+DNGSE
Sbjct: 252 TSIHGHRFFLTIVNDFSRHTWTFLMKSKAETRKLIHNFVALIETRFNKRIKTIRTDNGSE 311

Query: 493 FSLPLFYASNGIIHQTSCV 549
           F +  FYA +GI+HQTSC+
Sbjct: 312 FLMHDFYAQHGILHQTSCI 330


>gb|KYP76882.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 187

 Score =  162 bits (409), Expect = 1e-47
 Identities = 82/155 (52%), Positives = 100/155 (64%), Gaps = 1/155 (0%)
 Frame = +1

Query: 73  NVACNLTTASVSLWHARLGHASSKVLGFLP-HVNSTCNTKFDSCDVCHFAKQKRLPFPDR 249
           N     TT+S  LWH RLGH S  VL  +  H       K  +CD CHF KQ  LPFP  
Sbjct: 33  NAQPKATTSSFDLWHYRLGHPSHVVLQTMKIHFPYVTYNKNVTCDYCHFGKQTILPFPTS 92

Query: 250 TSVTLSAFDLVHCDIWGPFGTPSHNGFKYFLTIVDDFSRCTWIYLLKQKSETKLHSEAFH 429
           T+ +LS FDLVH DIWGP   PS +G K FLT+VDD+SR TWIY +K KSET+   + F 
Sbjct: 93  TTKSLSCFDLVHMDIWGPLAIPSIHGHKNFLTVVDDYSRHTWIYFMKSKSETRNMIQNFI 152

Query: 430 NMVQTQFHKKIKILRSDNGSEFSLPLFYASNGIIH 534
           + VQTQF K IK++RSDNG EF++   YA+ GI+H
Sbjct: 153 SYVQTQFPKHIKVIRSDNGVEFAMDQLYATYGIVH 187


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  174 bits (442), Expect = 2e-47
 Identities = 85/191 (44%), Positives = 123/191 (64%), Gaps = 8/191 (4%)
 Frame = +1

Query: 1   QDMNTKKMIGFAKESGGLYHFQLSNVACNLTTA---SVSLWHARLGHASSKVLGFLPH-- 165
           QD  ++ ++G  +  GG +HF+ + +A ++T     +  LWH+R+GH +++V+  +P   
Sbjct: 352 QDRTSRMVMGAGRRVGGTFHFRSTEIAASVTVKEEKNYELWHSRMGHPAARVVSLIPESS 411

Query: 166 --VNSTCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGPFGTPSHNGFKYF 339
             V+ST   K  +CDVCH AKQ R  FP   + TL  F+L++CD+WGP+ TPSH G +YF
Sbjct: 412 VSVSSTHLNK--ACDVCHRAKQTRNSFPLSINKTLRIFELIYCDLWGPYRTPSHTGARYF 469

Query: 340 LTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDNGSEF-SLPLFYA 516
           LTI+DD+SR  W+YLL  KSE   H + F  M   QF+ KIK +RSDNG+EF  L  F+ 
Sbjct: 470 LTIIDDYSRGVWLYLLNDKSEAPCHLKNFFAMTDRQFNVKIKTVRSDNGTEFLCLTKFFQ 529

Query: 517 SNGIIHQTSCV 549
             G+IH+ SCV
Sbjct: 530 EQGVIHERSCV 540


>gb|KYP34124.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 264

 Score =  164 bits (414), Expect = 2e-47
 Identities = 89/195 (45%), Positives = 117/195 (60%), Gaps = 18/195 (9%)
 Frame = +1

Query: 19  KMIGFAKESGGLYHFQLSN-VACN-------LTTASVS---------LWHARLGHASSKV 147
           KMIG A++  GLY  + SN + CN       +  +++S         LWH RLGH S+ +
Sbjct: 18  KMIGAARKIDGLYCLEESNDLNCNEVLQHSVINKSNISVVNAVNTSELWHHRLGHTSNSI 77

Query: 148 LGFLP-HVNSTCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGPFGTPSHN 324
           L  L    N         CD CHFAK K+LPFP R S +   F+L+H DIWGP  T S +
Sbjct: 78  LQLLSSQYNDIIYKNCTPCDTCHFAKHKKLPFPVRISKSSHLFELLHADIWGPLHTISID 137

Query: 325 GFKYFLTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDNGSEFSLP 504
           G KYFLT+VDDFS  TW++LLK K+E K     F ++++ QF  K+K LRSDNG EF L 
Sbjct: 138 GHKYFLTLVDDFSSFTWVHLLKSKAEVKTVLPKFIHLIENQFGIKLKRLRSDNGKEFFLT 197

Query: 505 LFYASNGIIHQTSCV 549
            F++S GI H+TSC+
Sbjct: 198 DFFSSKGIFHETSCI 212


>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1316

 Score =  174 bits (440), Expect = 4e-47
 Identities = 90/193 (46%), Positives = 120/193 (62%), Gaps = 10/193 (5%)
 Frame = +1

Query: 1   QDMNTKKMIGFAKESGGLYHFQLSNVACNLTTA----------SVSLWHARLGHASSKVL 150
           Q+ NT K IG    + GLY F  SN+    T +           + LWH R+GH S + L
Sbjct: 369 QETNTMKKIGTVDVNEGLYSFTASNIHHPSTNSVIVHPKCSIQPIDLWHFRMGHLSHERL 428

Query: 151 GFLPHVNSTCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGPFGTPSHNGF 330
              P ++   +T F SC+ CH AKQK+LPFP   S     FDL+H DIWGP    S +G 
Sbjct: 429 QSFPFLS--VDTSF-SCNTCHHAKQKKLPFPLSHSYASQPFDLLHMDIWGPCSVTSMHGH 485

Query: 331 KYFLTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDNGSEFSLPLF 510
           KYFLTIVDD +R TW++L++ KSET+ H   F N V+TQF K +K++R+DNG EFS+  +
Sbjct: 486 KYFLTIVDDHTRFTWLFLMQNKSETRQHIINFINQVETQFDKHVKVIRTDNGLEFSMTQY 545

Query: 511 YASNGIIHQTSCV 549
           ++S GIIHQT+CV
Sbjct: 546 FSSKGIIHQTTCV 558


>gb|KYP40816.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1298

 Score =  173 bits (438), Expect = 8e-47
 Identities = 98/203 (48%), Positives = 119/203 (58%), Gaps = 20/203 (9%)
 Frame = +1

Query: 1    QDMNTKKMIGFAKESGGLYHFQLSNVA-------------CNLTTASVSLWHARLGHASS 141
            QD N K MIG A     LY  Q  N +              N+  ++  LWH RLGH S 
Sbjct: 490  QDHNNKLMIGPANLQCNLYILQRQNFSENKIVNSARTSSDNNMNNSNFDLWHYRLGHPSD 549

Query: 142  KVL----GFLPHVNSTCNTKFDS---CDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWG 300
             VL    G  P+V      K+D    CD CH AKQ +L FP   + T S FDL+H DIWG
Sbjct: 550  SVLQQIKGQFPYV------KYDHKLVCDYCHLAKQCKLSFPISINSTASCFDLIHMDIWG 603

Query: 301  PFGTPSHNGFKYFLTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSD 480
            P    S +G KYFLTIVDDFSR TW++L+K KSET+   + F ++  TQ+ KK+KI+RSD
Sbjct: 604  PLSICSIHGHKYFLTIVDDFSRNTWVFLMKAKSETRTLIQNFISLTFTQYKKKVKIIRSD 663

Query: 481  NGSEFSLPLFYASNGIIHQTSCV 549
            NG EF +P FY S GIIHQTSCV
Sbjct: 664  NGIEFRMPDFYNSQGIIHQTSCV 686


>gb|KYP64431.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 812

 Score =  172 bits (436), Expect = 9e-47
 Identities = 99/203 (48%), Positives = 117/203 (57%), Gaps = 20/203 (9%)
 Frame = +1

Query: 1   QDMNTKKMIGFAKESGGLY-------------HFQLSNVACNLTTASVSLWHARLGHASS 141
           QDM T KMIG A     LY             H   S +A N T     LWH RLGH S 
Sbjct: 99  QDMTTLKMIGRADVQNCLYVLSQPTKPQVPNQHIINSIIAKNPTVPFFDLWHFRLGHPSI 158

Query: 142 KVLGFLPHVNSTCN----TKFDS---CDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWG 300
            VL       + C      KFDS   CD CH AKQ +LPFP     + + FDL+H DIWG
Sbjct: 159 LVL------QNICKHFLFIKFDSMKVCDYCHLAKQSKLPFPPGIHKSSAPFDLIHIDIWG 212

Query: 301 PFGTPSHNGFKYFLTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSD 480
           P    S  G KYFLTIVDDF+R TW++L+K K ET++  + F  +VQTQF+K+IKILR+D
Sbjct: 213 PLAISSIQGHKYFLTIVDDFTRHTWLFLMKSKHETRILVKNFITLVQTQFNKRIKILRTD 272

Query: 481 NGSEFSLPLFYASNGIIHQTSCV 549
           NG EFS+   Y   GIIHQTSCV
Sbjct: 273 NGLEFSMSSIYQDLGIIHQTSCV 295


>ref|XP_010420948.1| PREDICTED: uncharacterized protein LOC104706448 [Camelina sativa]
          Length = 770

 Score =  171 bits (434), Expect = 1e-46
 Identities = 85/190 (44%), Positives = 125/190 (65%), Gaps = 7/190 (3%)
 Frame = +1

Query: 1   QDMNTKKMIGFAKESGGLYHFQLSNVACNLTTA---SVSLWHARLGHASSKVLGFLPHVN 171
           QD +++ +IG  K  G  +HF+   +A  +TT    ++ LWH R+GH S+KVLG LP ++
Sbjct: 315 QDRSSRMVIGAGKRVGSAFHFRRMELAAAVTTQDTENLELWHKRMGHPSAKVLGVLPCIS 374

Query: 172 ---STCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGPFGTPSHNGFKYFL 342
              S  N   D CDVC  AK+ R  FP   + T + F+L+H  +WGP+  PSH+G +YFL
Sbjct: 375 NSVSVINLNKD-CDVCFCAKKTRESFPLSMNKTSTIFELIHIVLWGPYRVPSHSGARYFL 433

Query: 343 TIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDNGSEF-SLPLFYAS 519
           TIVDD+S+  W+YLL  K+ET+ H +    + + QF+K++K ++SDNG+EF SL  F+  
Sbjct: 434 TIVDDYSKGVWLYLLPNKAETREHLKKLFALTERQFNKQVKTVKSDNGTEFISLTSFFQQ 493

Query: 520 NGIIHQTSCV 549
           NGI+H+TSCV
Sbjct: 494 NGIVHETSCV 503


>gb|KYP70978.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 332

 Score =  164 bits (414), Expect = 1e-46
 Identities = 89/195 (45%), Positives = 117/195 (60%), Gaps = 18/195 (9%)
 Frame = +1

Query: 19  KMIGFAKESGGLYHFQLSN-VACN-------LTTASVS---------LWHARLGHASSKV 147
           KMIG A++  GLY  + SN + CN       +  +++S         LWH RLGH S+ +
Sbjct: 86  KMIGAARKIDGLYCLEESNDLNCNEVLQHSVINKSNISVVNAVNTSELWHHRLGHTSNSI 145

Query: 148 LGFLP-HVNSTCNTKFDSCDVCHFAKQKRLPFPDRTSVTLSAFDLVHCDIWGPFGTPSHN 324
           L  L    N         CD CHFAK K+LPFP R S +   F+L+H DIWGP  T S +
Sbjct: 146 LQLLSSQYNDIIYKNCTPCDTCHFAKHKKLPFPVRISKSSHLFELLHADIWGPLHTISID 205

Query: 325 GFKYFLTIVDDFSRCTWIYLLKQKSETKLHSEAFHNMVQTQFHKKIKILRSDNGSEFSLP 504
           G KYFLT+VDDFS  TW++LLK K+E K     F ++++ QF  K+K LRSDNG EF L 
Sbjct: 206 GHKYFLTLVDDFSSFTWVHLLKSKAEVKTVLPKFIHLIENQFGIKLKRLRSDNGKEFFLT 265

Query: 505 LFYASNGIIHQTSCV 549
            F++S GI H+TSC+
Sbjct: 266 DFFSSKGIFHETSCI 280