BLASTX nr result

ID: Rehmannia27_contig00039300 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00039300
         (550 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011094293.1| PREDICTED: transcription initiation factor T...    67   6e-10
ref|XP_011094291.1| PREDICTED: transcription initiation factor T...    67   6e-10
ref|XP_012839744.1| PREDICTED: transcription initiation factor T...    58   9e-07

>ref|XP_011094293.1| PREDICTED: transcription initiation factor TFIID subunit 2 isoform X2
            [Sesamum indicum]
          Length = 1474

 Score = 67.4 bits (163), Expect = 6e-10
 Identities = 50/111 (45%), Positives = 58/111 (52%), Gaps = 38/111 (34%)
 Frame = -2

Query: 549  PSVELPGGETRVGG----------VESGGKEHLPETRQD--------------------- 463
            PS+ELP  E R+G           VESG K+ +  TRQD                     
Sbjct: 1365 PSLELPSQERRIGAANNLDAKPTVVESGSKQ-VSGTRQDMVRGEGATSSSKELHKLHSTS 1423

Query: 462  --TVGGLRP---EPSEANV--NRTDGSVSATPSAPSHKIKIKFKNRTLGKQ 331
               VG ++P   EP EANV  NRTDGSV+   SA SHKIKIKFKNRTLGK+
Sbjct: 1424 GINVGSVQPKPAEPVEANVVVNRTDGSVNVPQSATSHKIKIKFKNRTLGKK 1474


>ref|XP_011094291.1| PREDICTED: transcription initiation factor TFIID subunit 2 isoform X1
            [Sesamum indicum] gi|747093008|ref|XP_011094292.1|
            PREDICTED: transcription initiation factor TFIID subunit
            2 isoform X1 [Sesamum indicum]
          Length = 1508

 Score = 67.4 bits (163), Expect = 6e-10
 Identities = 50/111 (45%), Positives = 58/111 (52%), Gaps = 38/111 (34%)
 Frame = -2

Query: 549  PSVELPGGETRVGG----------VESGGKEHLPETRQD--------------------- 463
            PS+ELP  E R+G           VESG K+ +  TRQD                     
Sbjct: 1399 PSLELPSQERRIGAANNLDAKPTVVESGSKQ-VSGTRQDMVRGEGATSSSKELHKLHSTS 1457

Query: 462  --TVGGLRP---EPSEANV--NRTDGSVSATPSAPSHKIKIKFKNRTLGKQ 331
               VG ++P   EP EANV  NRTDGSV+   SA SHKIKIKFKNRTLGK+
Sbjct: 1458 GINVGSVQPKPAEPVEANVVVNRTDGSVNVPQSATSHKIKIKFKNRTLGKK 1508


>ref|XP_012839744.1| PREDICTED: transcription initiation factor TFIID subunit 2
            [Erythranthe guttata] gi|604330496|gb|EYU35524.1|
            hypothetical protein MIMGU_mgv1a000175mg [Erythranthe
            guttata]
          Length = 1495

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 46/101 (45%), Positives = 50/101 (49%), Gaps = 29/101 (28%)
 Frame = -2

Query: 549  PSVELPGGETRVGGVESGGKEHLPETRQDTVGG-------------------------LR 445
            PS+ LP  E  V GV        PETRQD VGG                         ++
Sbjct: 1400 PSINLPSHEKTVEGVLE------PETRQDIVGGERAASAASAKESSQKINDSESNVSNIQ 1453

Query: 444  PEPSEAN--VNRTDGSVSATP-SAPS-HKIKIKFKNRTLGK 334
            P+  E N  V RTDGSV AT  SAPS HKIKIKFKNRTL K
Sbjct: 1454 PKQGEVNAVVPRTDGSVGATTASAPSSHKIKIKFKNRTLDK 1494


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