BLASTX nr result

ID: Rehmannia27_contig00038389 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00038389
         (408 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011090831.1| PREDICTED: pentatricopeptide repeat-containi...    89   4e-18
ref|XP_012827854.1| PREDICTED: pentatricopeptide repeat-containi...    75   3e-13

>ref|XP_011090831.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18950
           [Sesamum indicum]
          Length = 640

 Score = 89.0 bits (219), Expect = 4e-18
 Identities = 43/62 (69%), Positives = 52/62 (83%)
 Frame = -2

Query: 191 MARLPSFFSNIYIRQNPKSFQGTTPQIRTRNRNLSIDQINGSSEEVLQHSRKPDEIFAQN 12
           MAR+PSFFSN+ +RQNPKS +  TPQIR  NRNLS+DQ NG+SEE+ Q  +KPDEIFAQN
Sbjct: 1   MARIPSFFSNLCLRQNPKSLRAITPQIR--NRNLSLDQFNGNSEELAQQPQKPDEIFAQN 58

Query: 11  QI 6
           +I
Sbjct: 59  RI 60


>ref|XP_012827854.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18950
           [Erythranthe guttata]
          Length = 680

 Score = 75.1 bits (183), Expect = 3e-13
 Identities = 40/72 (55%), Positives = 50/72 (69%)
 Frame = -2

Query: 221 DENSIELVFGMARLPSFFSNIYIRQNPKSFQGTTPQIRTRNRNLSIDQINGSSEEVLQHS 42
           + +S+EL   MAR+PSF SN+ +RQNPKS Q TTPQI  R+RNLS+DQ NG+        
Sbjct: 49  ENDSVELALAMARIPSFLSNLCLRQNPKSLQPTTPQI--RSRNLSVDQFNGN-------- 98

Query: 41  RKPDEIFAQNQI 6
             PDEI AQN+I
Sbjct: 99  --PDEISAQNRI 108


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