BLASTX nr result
ID: Rehmannia27_contig00038173
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00038173
(611 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP50175.1| Copia protein [Cajanus cajan] 63 5e-24
ref|XP_015888278.1| PREDICTED: uncharacterized mitochondrial pro... 72 1e-22
ref|XP_014633505.1| PREDICTED: uncharacterized mitochondrial pro... 84 2e-22
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 82 4e-22
gb|ABW74566.1| integrase [Boechera divaricarpa] 85 6e-22
ref|XP_008237766.1| PREDICTED: uncharacterized protein LOC103336... 82 1e-21
gb|KYP40234.1| Retrovirus-related Pol polyprotein from transposo... 80 1e-21
gb|KYP67390.1| Retrovirus-related Pol polyprotein from transposo... 81 2e-21
gb|KYP73058.1| Retrovirus-related Pol polyprotein from transposo... 80 5e-21
gb|KYP39799.1| Retrovirus-related Pol polyprotein from transposo... 80 5e-21
gb|KYP38330.1| Retrovirus-related Pol polyprotein from transposo... 79 7e-21
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera] 76 9e-21
gb|KYP52389.1| Retrovirus-related Pol polyprotein from transposo... 79 2e-20
gb|KYP71432.1| Retrovirus-related Pol polyprotein from transposo... 76 3e-20
gb|KYP58998.1| Retrovirus-related Pol polyprotein from transposo... 81 3e-20
gb|KYP42299.1| Retrovirus-related Pol polyprotein from transposo... 82 4e-20
gb|KYP35753.1| Retrovirus-related Pol polyprotein from transposo... 77 7e-20
gb|KYP39660.1| Retrovirus-related Pol polyprotein from transposo... 77 7e-20
gb|KYP69985.1| Retrovirus-related Pol polyprotein from transposo... 77 8e-20
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 84 1e-19
>gb|KYP50175.1| Copia protein [Cajanus cajan]
Length = 309
Score = 63.2 bits (152), Expect(4) = 5e-24
Identities = 27/49 (55%), Positives = 39/49 (79%)
Frame = +2
Query: 299 SLVGPLIYLTNTRPYIVYPINLVSRFIHDPSKLHYATTKRILRYVQGIR 445
SL+G L+YLT TRP I+Y ++L+SRF+ PS++H+ KRILRY+QG +
Sbjct: 87 SLIGSLLYLTATRPDIMYVVSLLSRFMQKPSQIHFGAAKRILRYLQGTK 135
Score = 49.7 bits (117), Expect(4) = 5e-24
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 444 EELDIKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTIS 608
+E I Y + L+GYTD D VG +D KST Y F LGS I SWAS KQ T++
Sbjct: 135 KEFGIWYKTMTNSSLLGYTDSDWVGSVDDMKSTFGYAFSLGSGIFSWASKKQATVA 190
Score = 33.1 bits (74), Expect(4) = 5e-24
Identities = 18/30 (60%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +2
Query: 59 EFKDAMME-YDMTHLGLMEYFLGI*VRQ*K 145
EFK+ MM+ ++M LGLM YFLGI V Q K
Sbjct: 6 EFKEDMMKTFEMMDLGLMNYFLGIEVSQKK 35
Score = 32.3 bits (72), Expect(4) = 5e-24
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +1
Query: 142 KMRIVNSQ*KYLKA*LKNFEMNNCKPISTLLAVNE*L*LNDGVA*VD 282
K I Q KY +A LK F+M+ CK ++T L E L +DG D
Sbjct: 35 KKGIFICQKKYTEALLKKFKMSGCKTVTTPLVTKEKLQKDDGAPDAD 81
>ref|XP_015888278.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Ziziphus jujuba]
Length = 142
Score = 71.6 bits (174), Expect(2) = 1e-22
Identities = 33/50 (66%), Positives = 42/50 (84%)
Frame = +2
Query: 299 SLVGPLIYLTNTRPYIVYPINLVSRFIHDPSKLHYATTKRILRYVQGIRR 448
SLVG LIYLTNT P IV+ ++ VSRF+H+PSK H+AT KRI+RY+QG R+
Sbjct: 23 SLVGCLIYLTNTMPDIVFAVSYVSRFMHEPSKNHHATAKRIIRYLQGTRK 72
Score = 62.4 bits (150), Expect(2) = 1e-22
Identities = 30/56 (53%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +3
Query: 447 ELDIKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTISL 611
+L IKY K +NKL+GYTD D +D KST Y+FCLG++ ISW+S KQ+T++L
Sbjct: 72 KLGIKYAKEADNKLIGYTDNDWASSVDDSKSTLGYLFCLGTKPISWSSKKQRTVAL 127
>ref|XP_014633505.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Glycine max]
Length = 324
Score = 83.6 bits (205), Expect(2) = 2e-22
Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAMM-EYDMTHLGLMEYFLGI*VRQ*--------K*EX 154
+CLYVDDLI+ EFK +MM E++MTHLG+M YFLGI + Q K
Sbjct: 4 VCLYVDDLIFTGNCTLMFDEFKKSMMNEFEMTHLGMMHYFLGIEIVQSDVGIFLSRKKYV 63
Query: 155 XXXXXXXXXHS*RTLK*TIVSQFQLYLQSMNNYS*MMV*LKLILNCV*SLVGPLIYLTNT 334
H+ ++ + F+L+ K+ +VG L+YLT T
Sbjct: 64 RDILDRFQMHNCNSVYTPVECGFKLHKDPEGK--------KINSTLYKQIVGSLMYLTAT 115
Query: 335 RPYIVYPINLVSRFIHDPSKLHYATTKRILRYVQGIR 445
RP I+Y ++L+S ++ +P+++H KRI+RY+QG R
Sbjct: 116 RPDIMYFVSLISMYMENPTEMHLLAAKRIIRYLQGTR 152
Score = 49.7 bits (117), Expect(2) = 2e-22
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +3
Query: 447 ELDIKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTISL 611
E ++ Y + ++ L+G+TD D G D RKSTS YVF +GS ISW+S KQ I+L
Sbjct: 153 EFELFYKRGEKFNLLGFTDSDYAGDSDDRKSTSGYVFMMGSTAISWSSRKQPIITL 208
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 82.4 bits (202), Expect(2) = 4e-22
Identities = 57/150 (38%), Positives = 83/150 (55%), Gaps = 4/150 (2%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAMME-YDMTHLGLMEYFLGI*VRQ*K*EXXXXXXXXX 178
+CLYVDD+IYI +S + V +FK MM ++M+ LGL++YFLG+ V Q K
Sbjct: 1010 VCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDK---DGIFISQK 1066
Query: 179 XHS*RTLK*TIVSQFQLYLQSMNNYS*MMV*---LKLILNCV*SLVGPLIYLTNTRPYIV 349
++ LK + ++ MN + K SLVG L YLT+TRP I
Sbjct: 1067 KYAEDLLKKFQMMNCEVATTPMNINEKLQRADGTEKANPKLFRSLVGGLNYLTHTRPDIA 1126
Query: 350 YPINLVSRFIHDPSKLHYATTKRILRYVQG 439
+ +++VSRF+ P+K H+ KR+LRYV G
Sbjct: 1127 FSVSVVSRFLQSPTKQHFGAAKRVLRYVAG 1156
Score = 49.7 bits (117), Expect(2) = 4e-22
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +3
Query: 447 ELDIKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTISL 611
+ I Y K +LVG+TD D G LD RKSTS F GS +++W+S KQ+T++L
Sbjct: 1159 DFGIWYSKAPNFRLVGFTDSDYAGCLDDRKSTSGSCFSFGSGVVTWSSKKQETVAL 1214
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 84.7 bits (208), Expect(2) = 6e-22
Identities = 56/148 (37%), Positives = 85/148 (57%), Gaps = 4/148 (2%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAMME-YDMTHLGLMEYFLGI*VRQ*K*EXXXXXXXXX 178
+CLYVDD+IY+ +S + V EFK +MME ++MT LGL+ +FLG+ V+Q +
Sbjct: 841 VCLYVDDMIYMGSSASLVSEFKASMMEKFEMTDLGLLYFFLGLEVKQVE---DGVFVSQH 897
Query: 179 XHS*RTLK*TIVSQFQLYLQSMNNYS*MMV*---LKLILNCV*SLVGPLIYLTNTRPYIV 349
++ LK ++ MN ++ K SLVG LIYLT+TRP I
Sbjct: 898 KYACDLLKRFDMAGCNAVETPMNVNEKLLAGDGTEKADATKFRSLVGGLIYLTHTRPDIC 957
Query: 350 YPINLVSRFIHDPSKLHYATTKRILRYV 433
+ ++ +SRF+H P+K H+ KR+LRY+
Sbjct: 958 FAVSAISRFMHGPTKQHFGAAKRLLRYI 985
Score = 46.6 bits (109), Expect(2) = 6e-22
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 447 ELDIKYVK*KENKLVGYTDRDRVGLL-DRKSTSRYVFCLGSRIISWASTKQKTISL 611
E + Y + KLVG+TD D G + DRKSTS +VF LGS + W+S KQ +L
Sbjct: 990 EYGLWYCSVSKFKLVGFTDSDWAGCVQDRKSTSGHVFNLGSGAVCWSSKKQNVTAL 1045
>ref|XP_008237766.1| PREDICTED: uncharacterized protein LOC103336496 [Prunus mume]
Length = 3764
Score = 81.6 bits (200), Expect(2) = 1e-21
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAMME-YDMTHLGLMEYFLGI*VRQ*K*EXXXXXXXXX 178
+ LYVDD+IY + P ++EFK MM+ Y+MT LG++ +FLG+ V Q
Sbjct: 740 VSLYVDDIIYTGSCPKMLEEFKQDMMQHYEMTDLGMLHHFLGMGVEQ------------- 786
Query: 179 XHS*RTLK*TIVSQFQLYLQSMNNYS*M---MV*LKLILN---C------------V*SL 304
T K + Q + ++ + + V + L++N C +
Sbjct: 787 -----TDKHIFIHQKKYAMKILEKFGMRDCKSVAIPLVVNEKLCREDGSEAADENEFRQI 841
Query: 305 VGPLIYLTNTRPYIVYPINLVSRFIHDPSKLHYATTKRILRYVQG 439
VG L+YLT TRP +++ +L++RF+H+PSK H T KR+LRY+QG
Sbjct: 842 VGSLLYLTATRPDVMFASSLLARFMHNPSKKHMGTAKRVLRYIQG 886
Score = 48.9 bits (115), Expect(2) = 1e-21
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 447 ELDIKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTISL 611
+ I++ K K L+GY D D G D +STS Y F LGS + SWAS KQ T++L
Sbjct: 889 DFGIEFAKGKTATLIGYCDSDWAGSEDDMRSTSGYAFTLGSGMFSWASIKQNTVAL 944
>gb|KYP40234.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 309
Score = 80.1 bits (196), Expect(2) = 1e-21
Identities = 58/162 (35%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Frame = +2
Query: 8 LYVDDLIYI*TSPT*VQEFKDAMME-YDMTHLGLMEYFL---------GI*VRQ*K*EXX 157
LYVDDLIY + + EFK+ MM+ ++MT LGLM YFL GI + Q K
Sbjct: 1 LYVDDLIYTGNNMKMMTEFKENMMKTFEMTDLGLMNYFLGIEVSQKKKGIFICQKK-YTE 59
Query: 158 XXXXXXXXHS*RTLK*TIVSQFQLYLQS------MNNYS*MMV*LKLILNCV*SLVGPLI 319
+T+ +V++ +L + Y SL+G L+
Sbjct: 60 ALLKKFKMSGCKTVTTPLVTKEKLQKDDGAPDADASRYK--------------SLIGSLL 105
Query: 320 YLTNTRPYIVYPINLVSRFIHDPSKLHYATTKRILRYVQGIR 445
YLT TRPYI+Y ++L+SRF+ PS++H+ KRILRY+QG +
Sbjct: 106 YLTATRPYIMYAVSLLSRFMQKPSQIHFGAAKRILRYLQGTK 147
Score = 50.4 bits (119), Expect(2) = 1e-21
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 444 EELDIKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTIS 608
+E I Y + L+GYTD D G +D KSTS Y F LGS I SWAS KQ T++
Sbjct: 147 KEFGIWYKTLTNSSLLGYTDSDWAGSVDDMKSTSGYAFSLGSGIFSWASKKQATVA 202
>gb|KYP67390.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 508
Score = 80.9 bits (198), Expect(2) = 2e-21
Identities = 54/147 (36%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAMME-YDMTHLGLMEYFLGI*VRQ*K*EXXXXXXXXX 178
+CLYVDDLI+ +P EF++AM++ ++MT LGLM YFLGI V Q
Sbjct: 192 VCLYVDDLIFTGNNPKMFAEFREAMVKCFEMTDLGLMSYFLGIKVDQQDDGIFISQKKFA 251
Query: 179 XHS*RTLK*TIVSQFQLYLQSMNNYS*MMV*LKLILNCV*SLVGPLIYLTNTRPYIVYPI 358
+ K ++ + + K+ SL+G L YLT TRP IVY +
Sbjct: 252 GDILKKFKMENSKPISTPVEEKLKLTSDIEGKKVNPTLYKSLIGSLRYLTATRPDIVYGV 311
Query: 359 NLVSRFIHDPSKLHYATTKRILRYVQG 439
L+SRF+ P H+ KRILRY++G
Sbjct: 312 GLLSRFMEKPRDSHWQAAKRILRYIKG 338
Score = 48.5 bits (114), Expect(2) = 2e-21
Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +3
Query: 456 IKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTISL 611
I Y K + LVGYTD D G ++ RKSTS Y F LGS ISW+S KQ+ ++L
Sbjct: 344 IFYDKDIDVNLVGYTDSDWAGDIETRKSTSGYAFNLGSGTISWSSKKQQVVAL 396
>gb|KYP73058.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 654
Score = 80.1 bits (196), Expect(2) = 5e-21
Identities = 54/147 (36%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAMM-EYDMTHLGLMEYFLGI*VRQ*K*EXXXXXXXXX 178
+ LYVDDLI+ ++ ++EFK+ MM E++MT LGLM+YFLG+ V+Q
Sbjct: 367 VALYVDDLIFTGSNAKLIKEFKEIMMKEFEMTDLGLMKYFLGLEVKQSNEGIFISQERYA 426
Query: 179 XHS*RTLK*TIVSQFQLYLQSMNNYS*MMV*LKLILNCV*SLVGPLIYLTNTRPYIVYPI 358
+ K + ++ S + SLVG L YLT TRP ++ +
Sbjct: 427 LEILKKFKMEDCNPVSTPMEPGTKLSKFDGGERADSGRYRSLVGSLRYLTCTRPDLMLSV 486
Query: 359 NLVSRFIHDPSKLHYATTKRILRYVQG 439
+ SRF+ DPS H+ KRILRYVQG
Sbjct: 487 GMTSRFMEDPSYTHWKALKRILRYVQG 513
Score = 48.1 bits (113), Expect(2) = 5e-21
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 450 LDIKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTISL 611
L I Y K + +LVGY+D D G +D RKSTS YVF LG+ +W S KQ ++L
Sbjct: 517 LGIFYSKSDDYRLVGYSDSDWCGDVDDRKSTSGYVFLLGNTAFTWLSKKQPIVTL 571
>gb|KYP39799.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 502
Score = 80.1 bits (196), Expect(2) = 5e-21
Identities = 54/147 (36%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAMM-EYDMTHLGLMEYFLGI*VRQ*K*EXXXXXXXXX 178
+ LYVDDLI+ ++ ++EFK+ MM E++MT LGLM+YFLG+ V+Q
Sbjct: 215 VALYVDDLIFTGSNAKLIKEFKEIMMKEFEMTDLGLMKYFLGLEVKQSNEGIFISQERYA 274
Query: 179 XHS*RTLK*TIVSQFQLYLQSMNNYS*MMV*LKLILNCV*SLVGPLIYLTNTRPYIVYPI 358
+ K + ++ S + SLVG L YLT TRP ++ +
Sbjct: 275 LEILKKFKMEDCNPVSTPMEPGTKLSKFDGGERADSGRYRSLVGSLRYLTCTRPDLMLSV 334
Query: 359 NLVSRFIHDPSKLHYATTKRILRYVQG 439
+ SRF+ DPS H+ KRILRYVQG
Sbjct: 335 GMTSRFMEDPSYTHWKALKRILRYVQG 361
Score = 48.1 bits (113), Expect(2) = 5e-21
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 450 LDIKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTISL 611
L I Y K + +LVGY+D D G +D RKSTS YVF LG+ +W S KQ ++L
Sbjct: 365 LGIFYSKSDDYRLVGYSDSDWCGDVDDRKSTSGYVFLLGNTAFTWLSKKQPIVTL 419
>gb|KYP38330.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1189
Score = 79.0 bits (193), Expect(2) = 7e-21
Identities = 59/167 (35%), Positives = 88/167 (52%), Gaps = 21/167 (12%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAMM-EYDMTHLGLMEYFLGI*VRQ*K*EXXXXXXXXX 178
+ LYVDDLI+ ++ ++EFK+ MM E++MT+LGLM+YFLG+ V+Q
Sbjct: 933 VALYVDDLIFTGSNAKLIKEFKEIMMKEFEMTNLGLMKYFLGLEVKQ------------- 979
Query: 179 XHS*RTLK*TIVSQFQLYLQSMNNY---------S*MMV*LKLIL-----------NCV* 298
+ + +SQ + L+ + N+ + M +KL C
Sbjct: 980 -----SDEGIFISQERYALEILKNFKMEDCNPVSTPMEPGMKLSKFDGGERADSGRYC-- 1032
Query: 299 SLVGPLIYLTNTRPYIVYPINLVSRFIHDPSKLHYATTKRILRYVQG 439
SLVG L YLT TRP ++ + + SRF+ DPS H+ KRILRYV+G
Sbjct: 1033 SLVGSLRYLTCTRPDLMLSVGITSRFMEDPSYTHWKALKRILRYVRG 1079
Score = 48.9 bits (115), Expect(2) = 7e-21
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 450 LDIKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTISL 611
L + Y K + +LVGYTD D G +D RKSTS YVF LG+ +W S KQ ++L
Sbjct: 1083 LGLFYSKLDDYRLVGYTDSDWCGDVDDRKSTSGYVFLLGNTAFTWLSKKQPIVTL 1137
>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
Length = 1424
Score = 75.9 bits (185), Expect(2) = 9e-21
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAMME-YDMTHLGLMEYFLGI*VRQ*K*EXXXXXXXXX 178
+ LYVDDLI+ V++F++ MM+ Y+M+ +GL+ YFLGI V Q +
Sbjct: 1100 VALYVDDLIFTGNDEKMVEKFRNEMMKKYEMSDMGLLHYFLGIEVYQEEDGVFICQKRYV 1159
Query: 179 XHS*RTLK*TIVSQFQLYLQSMNNYS*MMV*LKLILN----------CV*SLVGPLIYLT 328
H I+ +F + N S +V + + SLVG L+YLT
Sbjct: 1160 EH--------ILKKFGM--AGCNXVSTPLVVNEKLRKEDGGKMVDETHFRSLVGNLLYLT 1209
Query: 329 NTRPYIVYPINLVSRFIHDPSKLHYATTKRILRYVQG 439
TRP I++ +L+SRF+H PS LH KR+LRY+QG
Sbjct: 1210 ATRPDIMFAASLLSRFMHYPSHLHLGAAKRVLRYLQG 1246
Score = 51.6 bits (122), Expect(2) = 9e-21
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +3
Query: 447 ELDIKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTIS 608
EL IKY + E KL+G+ D D G +D KSTS Y F LGS +ISW S KQ +++
Sbjct: 1249 ELGIKYFRNIEVKLIGHCDSDWGGCIDDMKSTSGYAFSLGSGVISWVSKKQGSVA 1303
>gb|KYP52389.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 493
Score = 78.6 bits (192), Expect(2) = 2e-20
Identities = 55/150 (36%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAMME-YDMTHLGLMEYFLGI*VRQ*K*EXXXXXXXXX 178
+CLYVDDLI+ +P EF++AM++ ++MT LGLM YFLGI V Q +
Sbjct: 177 VCLYVDDLIFTGNNPKMFAEFREAMVKCFEMTDLGLMSYFLGIEVIQ---QDDGIFISQK 233
Query: 179 XHS*RTLK*TIVSQFQLYLQSMNNYS*MMV*L---KLILNCV*SLVGPLIYLTNTRPYIV 349
++ LK + +L + + + K+ SL+G L YL TRP IV
Sbjct: 234 KYAADILKKFKMENSKLVSTPVEGKLKLTSDIEGKKVNPTLYKSLIGSLRYLIATRPDIV 293
Query: 350 YPINLVSRFIHDPSKLHYATTKRILRYVQG 439
Y + L+SRF+ P H+ KRILRY++G
Sbjct: 294 YGVGLLSRFMEKPRDSHWQAAKRILRYIKG 323
Score = 47.8 bits (112), Expect(2) = 2e-20
Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +3
Query: 456 IKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTISL 611
I Y K + LVGYTD D G ++ RKSTS Y F LGS ISW+S KQ ++L
Sbjct: 329 IFYDKDIDVNLVGYTDSDWAGDIEMRKSTSGYAFNLGSGTISWSSKKQPVVAL 381
>gb|KYP71432.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 515
Score = 76.3 bits (186), Expect(2) = 3e-20
Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 16/164 (9%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAMME-YDMTHLGLMEYFL---------GI*VRQ*K*E 151
+ LYVDDLIY + + +FK+ MM+ ++MT LGLM YFL GI + Q K
Sbjct: 193 VSLYVDDLIYTGNNMKMMTKFKEDMMKTFEMTDLGLMNYFLGIEVSQKKKGIFICQKK-Y 251
Query: 152 XXXXXXXXXXHS*RTLK*TIVSQFQLYLQS------MNNYS*MMV*LKLILNCV*SLVGP 313
+T+ +V++ +L + Y SL+G
Sbjct: 252 TEALLKKFKMSGCKTVTTPLVTKEKLQKDDGAPDADASRYK--------------SLIGS 297
Query: 314 LIYLTNTRPYIVYPINLVSRFIHDPSKLHYATTKRILRYVQGIR 445
+YLT TRPYI+Y ++L+SRF+ PS++H+ KRI+RY+QG +
Sbjct: 298 SLYLTATRPYIMYAVSLLSRFMQKPSQIHFGAAKRIIRYLQGTK 341
Score = 49.7 bits (117), Expect(2) = 3e-20
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 444 EELDIKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTIS 608
+E I Y + L+GYTD D VG +D KST Y F LGS I SWAS KQ T++
Sbjct: 341 KEFGIWYKTMTNSSLLGYTDSDWVGSVDDMKSTFGYAFSLGSGIFSWASKKQATVA 396
>gb|KYP58998.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 248
Score = 80.9 bits (198), Expect(2) = 3e-20
Identities = 54/147 (36%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAMME-YDMTHLGLMEYFLGI*VRQ*K*EXXXXXXXXX 178
+CLYVDDLI+ +P EF++AM++ ++MT LGLM YFLGI V Q
Sbjct: 24 VCLYVDDLIFTGNNPKMFAEFREAMVKCFEMTDLGLMSYFLGIKVDQQDDGIFISQKKFA 83
Query: 179 XHS*RTLK*TIVSQFQLYLQSMNNYS*MMV*LKLILNCV*SLVGPLIYLTNTRPYIVYPI 358
+ K ++ + + K+ SL+G L YLT TRP IVY +
Sbjct: 84 GDILKKFKMENSKPISTPVEEKLKLTSDIGGKKVNPTLYKSLIGSLRYLTATRPNIVYGV 143
Query: 359 NLVSRFIHDPSKLHYATTKRILRYVQG 439
L+SRF+ P H+ KRILRY++G
Sbjct: 144 GLLSRFMEKPRDSHWQAAKRILRYIKG 170
Score = 44.7 bits (104), Expect(2) = 3e-20
Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 456 IKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTISL 611
I Y K + LVGYTD D G + RKS S Y F LGS ISW+S KQ+ ++L
Sbjct: 176 IFYDKGIDVNLVGYTDSDWAGDRETRKSMSGYAFHLGSGTISWSSKKQQVVAL 228
>gb|KYP42299.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 282
Score = 82.0 bits (201), Expect(2) = 4e-20
Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAM-MEYDMTHLGLMEYFLGI*VRQ*K*EXXXXXXXXX 178
+ LYVDDLI+ ++ ++EFK+ M E++MT+LGLM+YFLG+ V+Q
Sbjct: 84 VALYVDDLIFTGSNAKLIKEFKEIMEKEFEMTNLGLMKYFLGLEVKQPDEGIFISQERYA 143
Query: 179 XHS*RTLK*TIVSQFQLYLQSMNNYS*MMV*LKLILNCV*SLVGPLIYLTNTRPYIVYPI 358
+ K + ++S S + SLVG L YLT+TRP ++ +
Sbjct: 144 LEILKNFKLEDCNPVSTPMESGTKLSKFDGGERADSGRYRSLVGSLRYLTSTRPDLMLSV 203
Query: 359 NLVSRFIHDPSKLHYATTKRILRYVQG 439
+ SRF+ DPS H+ T KRILRYV+G
Sbjct: 204 GITSRFMKDPSYTHWKTLKRILRYVRG 230
Score = 43.1 bits (100), Expect(2) = 4e-20
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3
Query: 450 LDIKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTK 593
L + Y K + +LVGY+D D G +D RKSTS YVF LG+ +W S K
Sbjct: 234 LGLFYSKSDDYRLVGYSDSDWCGDVDDRKSTSGYVFLLGNTAFTWLSKK 282
>gb|KYP35753.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1318
Score = 77.0 bits (188), Expect(2) = 7e-20
Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAM-MEYDMTHLGLMEYFLGI*VRQ*K*EXXXXXXXXX 178
+ LYVDDLI+ ++ ++EFK+ M E++MT LGLM+YFLG+ V+Q
Sbjct: 999 VALYVDDLIFTGSNAKLIKEFKEIMEKEFEMTDLGLMKYFLGLEVKQSDEGIFISQERYA 1058
Query: 179 XHS*RTLK*TIVSQFQLYLQSMNNYS*MMV*LKLILNCV*SLVGPLIYLTNTRPYIVYPI 358
+ K + ++ S + SLVG L YLT+TRP ++ +
Sbjct: 1059 LEILKKFKMEDCNPVSTPMEPGTKLSKFDGGDRADSGRYRSLVGSLRYLTSTRPDLMLSV 1118
Query: 359 NLVSRFIHDPSKLHYATTKRILRYVQG 439
+ SRF+ DPS H+ KRILRYV+G
Sbjct: 1119 GITSRFMEDPSYTHWKALKRILRYVRG 1145
Score = 47.4 bits (111), Expect(2) = 7e-20
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 450 LDIKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTISL 611
L + Y K + +LVGY+D D G +D RKSTS YVF LG+ +W S KQ ++L
Sbjct: 1149 LGLFYSKSDDYRLVGYSDSDWCGDVDDRKSTSGYVFLLGNTAFTWLSKKQPIVTL 1203
>gb|KYP39660.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1195
Score = 77.0 bits (188), Expect(2) = 7e-20
Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAM-MEYDMTHLGLMEYFLGI*VRQ*K*EXXXXXXXXX 178
+ LYVDDLI+ ++ ++EFK+ M E++MT LGLM+YFLG+ V+Q
Sbjct: 876 VALYVDDLIFTGSNAKLIKEFKEIMEKEFEMTDLGLMKYFLGLEVKQSDEGIFISQERYA 935
Query: 179 XHS*RTLK*TIVSQFQLYLQSMNNYS*MMV*LKLILNCV*SLVGPLIYLTNTRPYIVYPI 358
+ K + ++ S + SLVG L YLT+TRP ++ +
Sbjct: 936 LEILKKFKMEDCNPVSTPMEPGTKLSKFDGGDRADSGRYRSLVGSLRYLTSTRPDLMLSV 995
Query: 359 NLVSRFIHDPSKLHYATTKRILRYVQG 439
+ SRF+ DPS H+ KRILRYV+G
Sbjct: 996 GITSRFMEDPSYTHWKALKRILRYVRG 1022
Score = 47.4 bits (111), Expect(2) = 7e-20
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 450 LDIKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTISL 611
L + Y K + +LVGY+D D G +D RKSTS YVF LG+ +W S KQ ++L
Sbjct: 1026 LGLFYSKSDDYRLVGYSDSDWCGDVDDRKSTSGYVFLLGNTAFTWLSKKQPIVTL 1080
>gb|KYP69985.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 357
Score = 77.0 bits (188), Expect(2) = 8e-20
Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAM-MEYDMTHLGLMEYFLGI*VRQ*K*EXXXXXXXXX 178
+ LYVDDLI+ ++ ++EFK+ M E++MT LGLM+YFLG+ V+Q
Sbjct: 84 VALYVDDLIFTGSNAKLIKEFKEIMEKEFEMTDLGLMKYFLGLEVKQSDEGIFISQERYA 143
Query: 179 XHS*RTLK*TIVSQFQLYLQSMNNYS*MMV*LKLILNCV*SLVGPLIYLTNTRPYIVYPI 358
+ K + ++ S + SLVG L YLT+TRP ++ +
Sbjct: 144 LEILKKFKMEDCNPVSTPMEPGTKLSKFDGGDRADSGRYRSLVGSLRYLTSTRPDLMLSV 203
Query: 359 NLVSRFIHDPSKLHYATTKRILRYVQG 439
+ SRF+ DPS H+ KRILRYV+G
Sbjct: 204 GITSRFMEDPSYTHWKALKRILRYVRG 230
Score = 47.4 bits (111), Expect(2) = 8e-20
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 450 LDIKYVK*KENKLVGYTDRDRVGLLD-RKSTSRYVFCLGSRIISWASTKQKTISL 611
L + Y K + +LVGY+D D G +D RKSTS YVF LG+ +W S KQ ++L
Sbjct: 234 LGLFYSKSDDYRLVGYSDSDWCGDVDDRKSTSGYVFLLGNTAFTWLSKKQPIVTL 288
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 83.6 bits (205), Expect(2) = 1e-19
Identities = 55/150 (36%), Positives = 85/150 (56%), Gaps = 4/150 (2%)
Frame = +2
Query: 2 ICLYVDDLIYI*TSPT*VQEFKDAMME-YDMTHLGLMEYFLGI*VRQ*K*EXXXXXXXXX 178
ICLYVDD+IY+ +S + + EFK M + ++M+ LGL+ +FLG+ V+Q +
Sbjct: 1110 ICLYVDDMIYMGSSSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVE---DGVFVSQR 1166
Query: 179 XHS*RTLK*TIVSQFQLYLQSMNNYS*MMV*---LKLILNCV*SLVGPLIYLTNTRPYIV 349
++ LK + ++ MN+ + + SLVG LIYLT+TRP I
Sbjct: 1167 KYAVDLLKKFNMLNCKVVAIPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIA 1226
Query: 350 YPINLVSRFIHDPSKLHYATTKRILRYVQG 439
+ + ++SRF+H PSK H TKR+LRY+ G
Sbjct: 1227 FAVGVISRFMHCPSKQHLGATKRLLRYIAG 1256
Score = 40.4 bits (93), Expect(2) = 1e-19
Identities = 22/32 (68%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = +3
Query: 474 KENKLVGYTDRDRVGLL-DRKSTSRYVFCLGS 566
+E KLVGYTD D G L DRKSTS Y+F LGS
Sbjct: 1268 QEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGS 1299