BLASTX nr result
ID: Rehmannia27_contig00038063
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00038063
(1047 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011075347.1| PREDICTED: mediator of RNA polymerase II tra... 61 1e-14
ref|XP_011075354.1| PREDICTED: mediator of RNA polymerase II tra... 61 1e-14
ref|XP_012840887.1| PREDICTED: mediator of RNA polymerase II tra... 60 1e-13
gb|EYU34519.1| hypothetical protein MIMGU_mgv1a0001481mg, partia... 60 1e-13
gb|EPS67818.1| hypothetical protein M569_06952, partial [Genlise... 60 7e-13
gb|ALT31534.1| mediator of RNA polymerase II transcription subun... 59 9e-13
ref|XP_012479007.1| PREDICTED: mediator of RNA polymerase II tra... 52 9e-11
ref|XP_012479008.1| PREDICTED: mediator of RNA polymerase II tra... 52 9e-11
gb|KJB30762.1| hypothetical protein B456_005G158900 [Gossypium r... 52 9e-11
gb|KVH97672.1| Mediator complex, subunit Med23 [Cynara carduncul... 49 2e-10
ref|XP_006349464.1| PREDICTED: mediator of RNA polymerase II tra... 49 1e-09
ref|XP_007045240.1| WD repeat-containing protein 42A isoform 1 [... 52 1e-09
ref|XP_007045241.1| WD repeat-containing protein 42A isoform 2 [... 52 1e-09
ref|XP_009767998.1| PREDICTED: mediator of RNA polymerase II tra... 51 1e-09
ref|XP_015076091.1| PREDICTED: mediator of RNA polymerase II tra... 49 2e-09
ref|XP_010321042.1| PREDICTED: mediator of RNA polymerase II tra... 49 2e-09
gb|KHG26882.1| Mediator of RNA polymerase II transcription subun... 52 3e-09
ref|XP_010110607.1| hypothetical protein L484_003995 [Morus nota... 52 3e-09
gb|KHG26881.1| Mediator of RNA polymerase II transcription subun... 52 3e-09
gb|KFK44412.1| hypothetical protein AALP_AA1G253700 [Arabis alpina] 47 5e-09
>ref|XP_011075347.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform X1 [Sesamum indicum]
Length = 1626
Score = 61.2 bits (147), Expect(3) = 1e-14
Identities = 32/48 (66%), Positives = 36/48 (75%), Gaps = 3/48 (6%)
Frame = +3
Query: 399 RGLIHDVTK*LLH*SG---DHRTLRLAENICVNLILSMMESFYVKRNG 533
+GLIHDVTK L G DHR RLAEN+C+NLILSM E FYVKR+G
Sbjct: 813 KGLIHDVTKMLATLKGKRGDHRAFRLAENLCMNLILSMREFFYVKRDG 860
Score = 35.4 bits (80), Expect(3) = 1e-14
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPT+ TET++ I VTTLAI+++ AEVE
Sbjct: 862 GPTDFTETLNRITVTTLAIIIKTRGVAEVE 891
Score = 31.2 bits (69), Expect(3) = 1e-14
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QHAWS+K L +FP+IL
Sbjct: 906 TSQHAWSEKTLRYFPSIL 923
>ref|XP_011075354.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform X2 [Sesamum indicum]
Length = 1624
Score = 61.2 bits (147), Expect(3) = 1e-14
Identities = 32/48 (66%), Positives = 36/48 (75%), Gaps = 3/48 (6%)
Frame = +3
Query: 399 RGLIHDVTK*LLH*SG---DHRTLRLAENICVNLILSMMESFYVKRNG 533
+GLIHDVTK L G DHR RLAEN+C+NLILSM E FYVKR+G
Sbjct: 811 KGLIHDVTKMLATLKGKRGDHRAFRLAENLCMNLILSMREFFYVKRDG 858
Score = 35.4 bits (80), Expect(3) = 1e-14
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPT+ TET++ I VTTLAI+++ AEVE
Sbjct: 860 GPTDFTETLNRITVTTLAIIIKTRGVAEVE 889
Score = 31.2 bits (69), Expect(3) = 1e-14
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QHAWS+K L +FP+IL
Sbjct: 904 TSQHAWSEKTLRYFPSIL 921
>ref|XP_012840887.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Erythranthe guttata]
Length = 1610
Score = 60.5 bits (145), Expect(3) = 1e-13
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 3/48 (6%)
Frame = +3
Query: 399 RGLIHDVTK*LLH*SG---DHRTLRLAENICVNLILSMMESFYVKRNG 533
+GLIHDVTK + G DHR RLAEN+C+NLILSM E FYVKR+G
Sbjct: 803 KGLIHDVTKIIATLKGKRGDHRAFRLAENLCLNLILSMREFFYVKRDG 850
Score = 32.7 bits (73), Expect(3) = 1e-13
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ VT LAI+++ AEVE
Sbjct: 852 GPTEFTETLNRTTVTNLAIIIKTRGVAEVE 881
Score = 31.2 bits (69), Expect(3) = 1e-13
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QHAWS+K L +FP+IL
Sbjct: 896 TSQHAWSEKTLRYFPSIL 913
>gb|EYU34519.1| hypothetical protein MIMGU_mgv1a0001481mg, partial [Erythranthe
guttata]
Length = 933
Score = 60.5 bits (145), Expect(3) = 1e-13
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 3/48 (6%)
Frame = +3
Query: 399 RGLIHDVTK*LLH*SG---DHRTLRLAENICVNLILSMMESFYVKRNG 533
+GLIHDVTK + G DHR RLAEN+C+NLILSM E FYVKR+G
Sbjct: 803 KGLIHDVTKIIATLKGKRGDHRAFRLAENLCLNLILSMREFFYVKRDG 850
Score = 32.7 bits (73), Expect(3) = 1e-13
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ VT LAI+++ AEVE
Sbjct: 852 GPTEFTETLNRTTVTNLAIIIKTRGVAEVE 881
Score = 31.2 bits (69), Expect(3) = 1e-13
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QHAWS+K L +FP+IL
Sbjct: 896 TSQHAWSEKTLRYFPSIL 913
>gb|EPS67818.1| hypothetical protein M569_06952, partial [Genlisea aurea]
Length = 982
Score = 59.7 bits (143), Expect(3) = 7e-13
Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 3/48 (6%)
Frame = +3
Query: 399 RGLIHDVTK*LLH*SG---DHRTLRLAENICVNLILSMMESFYVKRNG 533
+GL+H++TK + G DHRT RLAEN+C+NLILSM E FYVKR+G
Sbjct: 795 KGLLHEITKRIATLKGKRGDHRTFRLAENLCMNLILSMREFFYVKRDG 842
Score = 33.5 bits (75), Expect(3) = 7e-13
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ I VT+LAI+++ EVE
Sbjct: 844 GPTEFTETLNRIAVTSLAIIIKTRGIGEVE 873
Score = 28.9 bits (63), Expect(3) = 7e-13
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QHAWS+ L +FP++L
Sbjct: 888 TSQHAWSENTLRYFPSVL 905
>gb|ALT31534.1| mediator of RNA polymerase II transcription subunit 23-like
protein, partial [Rehmannia glutinosa]
Length = 1209
Score = 58.5 bits (140), Expect(3) = 9e-13
Identities = 30/47 (63%), Positives = 36/47 (76%), Gaps = 3/47 (6%)
Frame = +3
Query: 399 RGLIHDVTK*LLH*SG---DHRTLRLAENICVNLILSMMESFYVKRN 530
+GLIHDVTK + G DHR+ RLAEN+C+NLILSM E FYVKR+
Sbjct: 812 KGLIHDVTKIIATLKGKRGDHRSFRLAENLCMNLILSMREFFYVKRD 858
Score = 34.7 bits (78), Expect(3) = 9e-13
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ I VT LAI+++ AEVE
Sbjct: 861 GPTEFTETLNRITVTNLAIIIKTRGVAEVE 890
Score = 28.5 bits (62), Expect(3) = 9e-13
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T++HAWS+K L +FP IL
Sbjct: 905 TSKHAWSEKTLRYFPNIL 922
>ref|XP_012479007.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform X1 [Gossypium raimondii]
gi|763763509|gb|KJB30763.1| hypothetical protein
B456_005G158900 [Gossypium raimondii]
Length = 1603
Score = 52.0 bits (123), Expect(3) = 9e-11
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Frame = +3
Query: 396 CRGLIHDVTK*---LLH*SGDHRTLRLAENICVNLILSMMESFYVKRNG 533
C+ L++DVTK L GDHR RLAEN+C+NLILS+ + F VKR G
Sbjct: 787 CKPLMYDVTKIISALKGKRGDHRVFRLAENLCINLILSLRDFFSVKREG 835
Score = 33.9 bits (76), Expect(3) = 9e-11
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QH WS+K LC+FP+IL
Sbjct: 881 TSQHRWSEKTLCYFPSIL 898
Score = 28.9 bits (63), Expect(3) = 9e-11
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ I + TLAI ++ A+ +
Sbjct: 837 GPTEFTETLNRITIITLAITIKTRGIADAD 866
>ref|XP_012479008.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform X2 [Gossypium raimondii]
gi|763763510|gb|KJB30764.1| hypothetical protein
B456_005G158900 [Gossypium raimondii]
Length = 1602
Score = 52.0 bits (123), Expect(3) = 9e-11
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Frame = +3
Query: 396 CRGLIHDVTK*---LLH*SGDHRTLRLAENICVNLILSMMESFYVKRNG 533
C+ L++DVTK L GDHR RLAEN+C+NLILS+ + F VKR G
Sbjct: 786 CKPLMYDVTKIISALKGKRGDHRVFRLAENLCINLILSLRDFFSVKREG 834
Score = 33.9 bits (76), Expect(3) = 9e-11
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QH WS+K LC+FP+IL
Sbjct: 880 TSQHRWSEKTLCYFPSIL 897
Score = 28.9 bits (63), Expect(3) = 9e-11
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ I + TLAI ++ A+ +
Sbjct: 836 GPTEFTETLNRITIITLAITIKTRGIADAD 865
>gb|KJB30762.1| hypothetical protein B456_005G158900 [Gossypium raimondii]
Length = 1561
Score = 52.0 bits (123), Expect(3) = 9e-11
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Frame = +3
Query: 396 CRGLIHDVTK*---LLH*SGDHRTLRLAENICVNLILSMMESFYVKRNG 533
C+ L++DVTK L GDHR RLAEN+C+NLILS+ + F VKR G
Sbjct: 745 CKPLMYDVTKIISALKGKRGDHRVFRLAENLCINLILSLRDFFSVKREG 793
Score = 33.9 bits (76), Expect(3) = 9e-11
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QH WS+K LC+FP+IL
Sbjct: 839 TSQHRWSEKTLCYFPSIL 856
Score = 28.9 bits (63), Expect(3) = 9e-11
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ I + TLAI ++ A+ +
Sbjct: 795 GPTEFTETLNRITIITLAITIKTRGIADAD 824
>gb|KVH97672.1| Mediator complex, subunit Med23 [Cynara cardunculus var. scolymus]
Length = 1619
Score = 49.3 bits (116), Expect(3) = 2e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Frame = +3
Query: 405 LIHDVTK*LLH*SG---DHRTLRLAENICVNLILSMMESFYVKRNG 533
L++DVTK L G DHR RLAEN+C+NLI+S+ E F+V+R G
Sbjct: 822 LMYDVTKILSTLKGKRGDHRVFRLAENLCMNLIMSLREFFFVRREG 867
Score = 32.3 bits (72), Expect(3) = 2e-10
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+ H WS K LC+FPA+L
Sbjct: 913 TSHHTWSDKTLCYFPAVL 930
Score = 31.6 bits (70), Expect(3) = 2e-10
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ + V TLAI+++ A+ E
Sbjct: 869 GPTEFTETLNRVTVVTLAIIIKTRGIADAE 898
>ref|XP_006349464.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Solanum tuberosum] gi|971554030|ref|XP_015165074.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 23 [Solanum tuberosum]
Length = 1608
Score = 49.3 bits (116), Expect(3) = 1e-09
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Frame = +3
Query: 405 LIHDVTK*---LLH*SGDHRTLRLAENICVNLILSMMESFYVKRNG 533
L++DVTK L GDHR RLAEN+C+NLILS+ + F+VKR G
Sbjct: 804 LMYDVTKMISTLKGKRGDHRIFRLAENLCMNLILSLRDFFFVKREG 849
Score = 32.0 bits (71), Expect(3) = 1e-09
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE-LCHQSTCM 738
GPTE TET++ I + TLAI+++ E E L H T +
Sbjct: 851 GPTEFTETLNRITIVTLAIIIKTRGIGEFEHLLHLQTML 889
Score = 29.6 bits (65), Expect(3) = 1e-09
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QH WS+K L +FP+IL
Sbjct: 895 TSQHTWSEKTLRYFPSIL 912
>ref|XP_007045240.1| WD repeat-containing protein 42A isoform 1 [Theobroma cacao]
gi|508709175|gb|EOY01072.1| WD repeat-containing protein
42A isoform 1 [Theobroma cacao]
Length = 1606
Score = 52.0 bits (123), Expect(3) = 1e-09
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Frame = +3
Query: 396 CRGLIHDVTK*---LLH*SGDHRTLRLAENICVNLILSMMESFYVKRNG 533
C+ L++DVTK L GDHR RLAEN+C+NLILS+ + F VKR G
Sbjct: 788 CKTLMYDVTKIISALKGKRGDHRVFRLAENLCINLILSLRDFFSVKREG 836
Score = 30.0 bits (66), Expect(3) = 1e-09
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QH WS+K L HFP +L
Sbjct: 882 TSQHTWSKKTLRHFPPLL 899
Score = 28.9 bits (63), Expect(3) = 1e-09
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ I + TLAI ++ A+ +
Sbjct: 838 GPTEFTETLNRITIITLAITIKTRGIADAD 867
>ref|XP_007045241.1| WD repeat-containing protein 42A isoform 2 [Theobroma cacao]
gi|508709176|gb|EOY01073.1| WD repeat-containing protein
42A isoform 2 [Theobroma cacao]
Length = 1441
Score = 52.0 bits (123), Expect(3) = 1e-09
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Frame = +3
Query: 396 CRGLIHDVTK*---LLH*SGDHRTLRLAENICVNLILSMMESFYVKRNG 533
C+ L++DVTK L GDHR RLAEN+C+NLILS+ + F VKR G
Sbjct: 623 CKTLMYDVTKIISALKGKRGDHRVFRLAENLCINLILSLRDFFSVKREG 671
Score = 30.0 bits (66), Expect(3) = 1e-09
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QH WS+K L HFP +L
Sbjct: 717 TSQHTWSKKTLRHFPPLL 734
Score = 28.9 bits (63), Expect(3) = 1e-09
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ I + TLAI ++ A+ +
Sbjct: 673 GPTEFTETLNRITIITLAITIKTRGIADAD 702
>ref|XP_009767998.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Nicotiana sylvestris]
Length = 1477
Score = 50.8 bits (120), Expect(3) = 1e-09
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Frame = +3
Query: 405 LIHDVTK*---LLH*SGDHRTLRLAENICVNLILSMMESFYVKRNG 533
L++DVTK L GDHR RLAEN+C+NLILS+ + FYVKR G
Sbjct: 820 LMYDVTKMISTLKGKRGDHRIFRLAENLCMNLILSLRDFFYVKREG 865
Score = 30.0 bits (66), Expect(3) = 1e-09
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLE 690
GPTE TET++ I + TLAI+++
Sbjct: 867 GPTEFTETLNRITIVTLAIIIK 888
Score = 29.6 bits (65), Expect(3) = 1e-09
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QH WS+K L +FP+IL
Sbjct: 911 TSQHTWSEKTLRYFPSIL 928
>ref|XP_015076091.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Solanum pennellii] gi|970029525|ref|XP_015076092.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 23 [Solanum pennellii]
Length = 1608
Score = 49.3 bits (116), Expect(3) = 2e-09
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Frame = +3
Query: 405 LIHDVTK*---LLH*SGDHRTLRLAENICVNLILSMMESFYVKRNG 533
L++DVTK L GDHR RLAEN+C+NLILS+ + F+VKR G
Sbjct: 804 LMYDVTKMISTLKGKRGDHRIFRLAENLCMNLILSLRDFFFVKREG 849
Score = 30.8 bits (68), Expect(3) = 2e-09
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ I + TLAI+++ E E
Sbjct: 851 GPTEFTETLNRITIVTLAIIIKTRGIGEFE 880
Score = 29.6 bits (65), Expect(3) = 2e-09
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QH WS+K L +FP+IL
Sbjct: 895 TSQHTWSEKTLRYFPSIL 912
>ref|XP_010321042.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Solanum lycopersicum]
Length = 1608
Score = 49.3 bits (116), Expect(3) = 2e-09
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Frame = +3
Query: 405 LIHDVTK*---LLH*SGDHRTLRLAENICVNLILSMMESFYVKRNG 533
L++DVTK L GDHR RLAEN+C+NLILS+ + F+VKR G
Sbjct: 804 LMYDVTKMISTLKGKRGDHRIFRLAENLCMNLILSLRDFFFVKREG 849
Score = 30.8 bits (68), Expect(3) = 2e-09
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ I + TLAI+++ E E
Sbjct: 851 GPTEFTETLNRITIVTLAIIIKTRGIGEFE 880
Score = 29.6 bits (65), Expect(3) = 2e-09
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QH WS+K L +FP+IL
Sbjct: 895 TSQHTWSEKTLRYFPSIL 912
>gb|KHG26882.1| Mediator of RNA polymerase II transcription subunit 23 [Gossypium
arboreum] gi|728847665|gb|KHG27108.1| Mediator of RNA
polymerase II transcription subunit 23 [Gossypium
arboreum]
Length = 1578
Score = 52.0 bits (123), Expect(3) = 3e-09
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Frame = +3
Query: 396 CRGLIHDVTK*---LLH*SGDHRTLRLAENICVNLILSMMESFYVKRNG 533
C+ L++DVTK L GDHR RLAEN+C+NLILS+ + F VKR G
Sbjct: 761 CKPLMYDVTKIISALKGKRGDHRVFRLAENLCINLILSLRDFFSVKREG 809
Score = 28.9 bits (63), Expect(3) = 3e-09
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ I + TLAI ++ A+ +
Sbjct: 811 GPTEFTETLNRITIITLAITIKTRGIADAD 840
Score = 28.5 bits (62), Expect(3) = 3e-09
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QH WS+K L FP+IL
Sbjct: 855 TSQHTWSEKTLRFFPSIL 872
>ref|XP_010110607.1| hypothetical protein L484_003995 [Morus notabilis]
gi|587940387|gb|EXC26998.1| hypothetical protein
L484_003995 [Morus notabilis]
Length = 1545
Score = 52.0 bits (123), Expect(3) = 3e-09
Identities = 27/48 (56%), Positives = 35/48 (72%), Gaps = 3/48 (6%)
Frame = +3
Query: 399 RGLIHDVTK*---LLH*SGDHRTLRLAENICVNLILSMMESFYVKRNG 533
+ L++DVTK L GDHR+ RLAEN+C+NLILS+ E F+VKR G
Sbjct: 724 KALMYDVTKIISALKGKRGDHRSFRLAENLCMNLILSLREFFFVKREG 771
Score = 30.0 bits (66), Expect(3) = 3e-09
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ I + TLAI+++ A+ +
Sbjct: 773 GPTEFTETLNRITIITLAIIIKTRGIADAD 802
Score = 27.3 bits (59), Expect(3) = 3e-09
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 725 NQHAWSQKILCHFPAIL 775
+QH WS+K L +FP++L
Sbjct: 818 SQHTWSEKTLRYFPSVL 834
>gb|KHG26881.1| Mediator of RNA polymerase II transcription subunit 23 [Gossypium
arboreum] gi|728847664|gb|KHG27107.1| Mediator of RNA
polymerase II transcription subunit 23 [Gossypium
arboreum]
Length = 1100
Score = 52.0 bits (123), Expect(3) = 3e-09
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Frame = +3
Query: 396 CRGLIHDVTK*---LLH*SGDHRTLRLAENICVNLILSMMESFYVKRNG 533
C+ L++DVTK L GDHR RLAEN+C+NLILS+ + F VKR G
Sbjct: 283 CKPLMYDVTKIISALKGKRGDHRVFRLAENLCINLILSLRDFFSVKREG 331
Score = 28.9 bits (63), Expect(3) = 3e-09
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ I + TLAI ++ A+ +
Sbjct: 333 GPTEFTETLNRITIITLAITIKTRGIADAD 362
Score = 28.5 bits (62), Expect(3) = 3e-09
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QH WS+K L FP+IL
Sbjct: 377 TSQHTWSEKTLRFFPSIL 394
>gb|KFK44412.1| hypothetical protein AALP_AA1G253700 [Arabis alpina]
Length = 1607
Score = 47.4 bits (111), Expect(3) = 5e-09
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Frame = +3
Query: 405 LIHDVTK*---LLH*SGDHRTLRLAENICVNLILSMMESFYVKRNG 533
L++DVTK L GDHR RLAEN+C+NLILS+ + F VKR G
Sbjct: 778 LMYDVTKIISALKGKRGDHRIFRLAENLCMNLILSLRDFFSVKREG 823
Score = 31.2 bits (69), Expect(3) = 5e-09
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 722 TNQHAWSQKILCHFPAIL 775
T+QH WS+K L HFP++L
Sbjct: 869 TSQHTWSEKTLRHFPSLL 886
Score = 30.0 bits (66), Expect(3) = 5e-09
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 625 GPTEVTETMSWIMVTTLAIVLEISKNAEVE 714
GPTE TET++ I + TLAI ++ AE +
Sbjct: 825 GPTEFTETLNRITIMTLAITIKTRGIAEAD 854