BLASTX nr result

ID: Rehmannia27_contig00037941 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00037941
         (1313 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009767760.1| PREDICTED: DNA-directed RNA polymerase III s...    59   8e-06
ref|XP_009767753.1| PREDICTED: DNA-directed RNA polymerase III s...    59   1e-05

>ref|XP_009767760.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X2
           [Nicotiana sylvestris]
          Length = 442

 Score = 58.5 bits (140), Expect = 8e-06
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = -1

Query: 380 ESFNRLLNARFIERCPASGPFLAPPAEENFCQDLWGSKSAKVVN*T 243
           ++FN+L+NARF+ERCPA  PFL PPAE+       G+KSAK+V  T
Sbjct: 62  DNFNKLVNARFVERCPAPEPFLGPPAEDETAAKKQGAKSAKIVKQT 107


>ref|XP_009767753.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X1
           [Nicotiana sylvestris]
          Length = 539

 Score = 58.5 bits (140), Expect = 1e-05
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = -1

Query: 380 ESFNRLLNARFIERCPASGPFLAPPAEENFCQDLWGSKSAKVVN*T 243
           ++FN+L+NARF+ERCPA  PFL PPAE+       G+KSAK+V  T
Sbjct: 159 DNFNKLVNARFVERCPAPEPFLGPPAEDETAAKKQGAKSAKIVKQT 204


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