BLASTX nr result

ID: Rehmannia27_contig00037828 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00037828
         (735 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004289487.1| PREDICTED: uncharacterized protein ycf36 [Fr...    50   5e-06
ref|XP_011097233.1| PREDICTED: uncharacterized protein ycf36 [Se...    57   6e-06

>ref|XP_004289487.1| PREDICTED: uncharacterized protein ycf36 [Fragaria vesca subsp.
           vesca]
          Length = 309

 Score = 50.1 bits (118), Expect(2) = 5e-06
 Identities = 28/43 (65%), Positives = 30/43 (69%)
 Frame = +3

Query: 174 PEKKELK*TLVGTGELLVAAVSLFMLATQVHDIIQKTFVQKEN 302
           P  K LK TLVGTG LLV+AV LF+ AT V D IQ TF  KEN
Sbjct: 203 PVIKLLKQTLVGTGVLLVSAVMLFIFATPVEDFIQTTFSTKEN 245



 Score = 28.1 bits (61), Expect(2) = 5e-06
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +2

Query: 356 GRPVYCRDRYSGAL 397
           GRPVYCRDR+  AL
Sbjct: 282 GRPVYCRDRFYRAL 295


>ref|XP_011097233.1| PREDICTED: uncharacterized protein ycf36 [Sesamum indicum]
          Length = 310

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 47/114 (41%), Positives = 55/114 (48%), Gaps = 26/114 (22%)
 Frame = +3

Query: 174 PEKKELK*TLVGTGELLVAAVSLFMLATQVHDIIQKTFVQKENPPMFQPQRSSLSSK*G- 350
           P  K LK TLVGTG LLVA VSLF+ AT V D I+ TF QKE+P       S +S+K   
Sbjct: 199 PVIKLLKQTLVGTGALLVAGVSLFIFATPVEDFIKTTFAQKEDPS--DVSASKISTKFNI 256

Query: 351 -------------SMEDLSIVET----GILVH--------*LGG*YCKWGDLLK 437
                        S +DL+        G  V+          GG YCKW DLLK
Sbjct: 257 RKEELLRLPVDVKSDDDLAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLLK 310


Top