BLASTX nr result

ID: Rehmannia27_contig00037584 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00037584
         (1176 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008386770.1| PREDICTED: WD repeat-containing protein 89 h...    58   4e-06
ref|XP_011079679.1| PREDICTED: WD repeat-containing protein 89 h...    58   8e-06

>ref|XP_008386770.1| PREDICTED: WD repeat-containing protein 89 homolog, partial [Malus
           domestica]
          Length = 275

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 25/38 (65%), Positives = 27/38 (71%)
 Frame = -2

Query: 620 FAVHCLSNVYMQILFWDWRTMKQTACLEESHTEDVTQV 507
           F   C    Y QILFWDWR+ KQ ACLE+SH EDVTQV
Sbjct: 23  FPPSCCLTCYAQILFWDWRSNKQVACLEDSHVEDVTQV 60


>ref|XP_011079679.1| PREDICTED: WD repeat-containing protein 89 homolog [Sesamum
           indicum]
          Length = 386

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 25/27 (92%), Positives = 25/27 (92%)
 Frame = -2

Query: 587 QILFWDWRTMKQTACLEESHTEDVTQV 507
           QILFWDWRTMKQ ACLEESH EDVTQV
Sbjct: 146 QILFWDWRTMKQVACLEESHMEDVTQV 172


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