BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00036284
         (4235 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]   629   0.0  
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]   580   0.0  
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   582   e-179
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   575   e-179
gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposo...   537   e-173
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   566   e-173
gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposo...   537   e-173
ref|XP_008365969.1| PREDICTED: uncharacterized protein LOC103429...   558   e-173
dbj|BAH94406.1| Os08g0544300 [Oryza sativa Japonica Group]            545   e-172
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   562   e-172
ref|XP_009359358.1| PREDICTED: uncharacterized protein LOC103949...   556   e-172
gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposo...   532   e-171
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   545   e-171
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   559   e-171
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   555   e-171
ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513, p...   538   e-171
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]   547   e-170
emb|CCH50966.1| T4.5 [Malus x robusta]                                561   e-170
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   550   e-169
gb|AAB82754.1| retrofit [Oryza longistaminata]                        554   e-169

>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score =  629 bits (1622), Expect = 0.0
 Identities = 312/541 (57%), Positives = 396/541 (73%), Gaps = 5/541 (0%)
 Frame = +1

Query: 1282 HSMVTRSKNGIIKPKLFS-----ALTSSSSLEHEPYTVNGALADTRWSDAMLDEYNALVT 1446
            H M TRSK G IKPKL         TS S  +  P TV+ AL +  W   M++EY ALV 
Sbjct: 458  HPMTTRSKVGTIKPKLLPDHITYLSTSVSPSDQLPTTVSQALKNPNWHTTMVEEYQALVR 517

Query: 1447 KNTWILVPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVI 1626
             NTW LVP  P M+VI +KW+FR+K  +DGT++R+KARLVA+GF+Q AGV+F +TFSPVI
Sbjct: 518  NNTWTLVPFHPSMNVIDSKWIFRVKYNSDGTIQRYKARLVAKGFQQYAGVEFTDTFSPVI 577

Query: 1627 KPCTIRLIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKA 1806
            K  TIR++FTLA+T  W I+QID +NAFLNG++ ETVY++QP GFVST+HP +VCKLQKA
Sbjct: 578  KASTIRVVFTLAITYNWEIRQIDFNNAFLNGEITETVYLSQPAGFVSTSHPQHVCKLQKA 637

Query: 1807 LYGLKQAPRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPS 1986
            LYGLKQAPR WF KL+E L + GF +S SDTSLF  + NG  L +L+YVDD+L TGN+  
Sbjct: 638  LYGLKQAPRVWFHKLREALHTWGFISSTSDTSLFIYKHNGNFLLLLVYVDDLLITGNNVP 697

Query: 1987 AIDSVIQLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASP 2166
             + ++IQ L  +FALK LG V  FLG EA R ++GL LTQSKY  DLL KT M   K  P
Sbjct: 698  LVQTLIQDLQNRFALKDLGLVKDFLGFEALRTTTGLHLTQSKYTTDLLIKTKMHSAKPVP 757

Query: 2167 TPLSTSQKLSLLDSKLFEHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQ 2346
            TP+S + KL       F  P+LYRSTIG LQYLT TRPDI+FAVNKLSQ+L QPT  HW 
Sbjct: 758  TPMSAALKLHAASGPAFSDPTLYRSTIGALQYLTYTRPDIAFAVNKLSQYLQQPTELHWT 817

Query: 2347 ACKRLLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWS 2526
            ACKR+LRYLKG  H G+ FTP + + ++ ++DADWAS +DDRRST G+C+FLG+NL  WS
Sbjct: 818  ACKRVLRYLKGIVHRGLHFTPASSLHLQVYTDADWASSIDDRRSTTGYCVFLGTNLFTWS 877

Query: 2527 AKKQSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNV 2706
            ++KQ VV+RSS ++EYR+LA  + +V WL SL  E+G+S  +  ++WCDN  A ALA+N 
Sbjct: 878  SRKQPVVARSSTKAEYRALAHASXEVAWLRSLFSELGISLVNTPVIWCDNQGAGALAANP 937

Query: 2707 VFHARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERFQLLCSKLPLCS 2886
            VFH+RTKH+E+DV +VRE++L K++ V Y+ + EQ ADLFTKPLS  RFQ L +KL L  
Sbjct: 938  VFHSRTKHIEVDVXYVREQVLDKKLVVSYVPSVEQXADLFTKPLSIPRFQYLLTKLNLXV 997

Query: 2887 S 2889
            S
Sbjct: 998  S 998



 Score =  152 bits (383), Expect = 1e-33
 Identities = 116/401 (28%), Positives = 163/401 (40%), Gaps = 45/401 (11%)
 Frame = +1

Query: 3148 PANHSGGMESSSPISTAAFIPHFTPLTIRLDRSNYNFWKVQVLTTVRAHGFDGFLLGNLP 3327
            PA +S  + S   I T        P++++LDR+NY  W+ QVL + RAH  D  L+G LP
Sbjct: 21   PARNSSEVSS---ILTGQISSTLHPISVKLDRNNYTIWRSQVLPSARAHRLDQILIGKLP 77

Query: 3328 APIQ----TIVCDGTSVINPEYVLWMRRDQLLMSWMLSSISESMLGHISRCSTSHEVWST 3495
             P +    T V       NPEY  W+  D  L+SW+L+SISE+M GH+  C TS EVWS 
Sbjct: 78   KPPRFSQSTSVNSSQPTSNPEYDQWVILDXFLLSWILASISEAMYGHVVNCQTSAEVWSV 137

Query: 3496 FVNLFATQSKARALQLRFMLQTLKKGDLSIDAYILKMKSIADDLNSIGHIIADDDLVLYI 3675
               LF +  K+            K    ++ A I+K +S                     
Sbjct: 138  LEKLFVSDYKS------------KNSSTTVHATIIKERS--------------------- 164

Query: 3676 LGGLGTDYESVVVNLTTRVDSISLQEAQFVLQTHEMRLQSQISSTPINVHTSFVSPSADS 3855
                               ++ISLQE  ++LQ+HE+RL+   +++ I+     V P+A  
Sbjct: 165  -------------------EAISLQEVHYLLQSHEIRLEQLSAASVID-----VPPAAHI 200

Query: 3856 TPSANVAHLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITCQLCGKPNHVASKCYKRFD 4035
            T    V  +                              I CQLCGK  H A KC+ RFD
Sbjct: 201  T----VGGVQNSNTNNGQFRGSSSKNFRPRNVRNPQTSRIVCQLCGKMGHTAMKCFHRFD 256

Query: 4036 ISFKGSESSNSAPLS---------------EQPQAYLTGPSAPSM--------------- 4125
            + F+    + +   S                QPQ Y TGP  PS                
Sbjct: 257  VYFQSPPRAQNQQFSSLHQPQQPQLRPPPLHQPQYYSTGPLVPSRPIQNSHQQLDSTSTS 316

Query: 4126 ---------VDSN--WYFDSGATNHVTADLENLSIKSDYRG 4215
                     +DSN  W+ DSGAT+H+T D   L++   Y G
Sbjct: 317  PHAYIVAPDLDSNTSWFVDSGATHHMTTDSNTLNVSDHYCG 357


>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
          Length = 773

 Score =  580 bits (1496), Expect = 0.0
 Identities = 287/536 (53%), Positives = 379/536 (70%)
 Frame = +1

Query: 1267 VPTPCHSMVTRSKNGIIKPKLFSALTSSSSLEHEPYTVNGALADTRWSDAMLDEYNALVT 1446
            +P   H MVTR+K+GI K + F    ++     EP T + A  +  W  AM  EY AL+ 
Sbjct: 177  LPLNTHPMVTRAKSGIHKKRSFIVQHTT-----EPRTYSQAFKNDSWVQAMNSEYQALLR 231

Query: 1447 KNTWILVPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVI 1626
             NTW LVPP     ++  +W++++K R DG+++R KARLVA+GF Q  G+D+F+TFSPV+
Sbjct: 232  NNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDTFSPVV 291

Query: 1627 KPCTIRLIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKA 1806
            KPCTIRLI  LAV+ QWS++Q+DV N FLNGDL+E V+M QP+GFV+ T+PTYVCKL KA
Sbjct: 292  KPCTIRLILALAVSFQWSVRQLDVENGFLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKA 351

Query: 1807 LYGLKQAPRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPS 1986
            LYGLKQAPRAWF KL+  L   GF++S +DTSLF       +L +L+YVDDIL TG++P+
Sbjct: 352  LYGLKQAPRAWFQKLRIALLDYGFQSSRADTSLFIFHTATDILILLVYVDDILVTGSNPT 411

Query: 1987 AIDSVIQLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASP 2166
             +   I  L  KFAL+ LG ++YFLG++A +  S L L Q KY+ DLL++T M   K +P
Sbjct: 412  LVSHFISYLRTKFALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAP 471

Query: 2167 TPLSTSQKLSLLDSKLFEHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQ 2346
            TP    + LS  D      PS YR T+G LQY+TLTRPDI+FAVNK  QF+ +P+  HW 
Sbjct: 472  TPGRLGRTLSQSDGVSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWM 531

Query: 2347 ACKRLLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWS 2526
            A KR+LRYLKGT HLG+ F P   M  + +SDADWASC DDRRST G+C+FLGSNL+ WS
Sbjct: 532  AVKRILRYLKGTIHLGLHFQPAASMEXQGYSDADWASCPDDRRSTSGYCVFLGSNLISWS 591

Query: 2527 AKKQSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNV 2706
            + KQ +VS+SSAESEYR L   T ++VW+ SLL E+ + T SP ILWCDN SA  LA+N 
Sbjct: 592  SSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPT-SPPILWCDNQSAAHLAANP 650

Query: 2707 VFHARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERFQLLCSKL 2874
            VFH+R+KH+E+D+HF+REK+L +E+ + Y+ + +Q AD+FTK L   +F  L SKL
Sbjct: 651  VFHSRSKHIELDLHFIREKVLRQELQICYVPSGDQLADIFTKHLPITQFCNLRSKL 706



 Score =  119 bits (298), Expect = 1e-23
 Identities = 54/114 (47%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
 Frame = +1

Query: 724  LAQAGMPLKFWWDAFLASVFIINKLPSAVLANTSPHEKLFGLVPDYQFLKVFGCSCYPYL 903
            +AQ+ +P K+W  AF  +V++IN LP+ +L   SP + LF  +P+Y  L+VFGC C+P L
Sbjct: 1    MAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSL 60

Query: 904  RPYNSHKFQFRSSRCLFLGYSPDHKGYKCLS-SDGKLYIACTVEFNEKEFPYSA 1062
            RPY  HK  +RS+ C+FLGY+P HKGY CL  S  ++YI+  V F+E  FP+ +
Sbjct: 61   RPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPFQS 114


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  582 bits (1499), Expect = e-179
 Identities = 288/536 (53%), Positives = 380/536 (70%)
 Frame = +1

Query: 1267 VPTPCHSMVTRSKNGIIKPKLFSALTSSSSLEHEPYTVNGALADTRWSDAMLDEYNALVT 1446
            +P   H MVTR+K+GI K + F    ++     EP T + A  +  W  AM  EY AL+ 
Sbjct: 830  LPLNTHPMVTRAKSGIHKKRSFIVQHTT-----EPRTYSQASKNDSWVQAMNSEYQALLR 884

Query: 1447 KNTWILVPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVI 1626
             NTW LVPP     ++  +W++++K R DG+++R KARLVA+GF Q  G+D+F+TFSPV+
Sbjct: 885  NNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDTFSPVV 944

Query: 1627 KPCTIRLIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKA 1806
            KPCTIRLI  LAV+ QWS++Q+DV NAFLNGDL+E V+M QP+GFV+ T+PTYVCKL KA
Sbjct: 945  KPCTIRLILALAVSFQWSVRQLDVENAFLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKA 1004

Query: 1807 LYGLKQAPRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPS 1986
            LYGLKQAPRAWF KL+  L   GF++S +DTSLF       +L +L+YVDDIL TG++P 
Sbjct: 1005 LYGLKQAPRAWFQKLRIALLDYGFQSSRADTSLFIFHTATDILILLVYVDDILVTGSNPM 1064

Query: 1987 AIDSVIQLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASP 2166
             +   I  L  KFAL+ LG ++YFLG++A +  S L L Q KY+ DLL++T M   K +P
Sbjct: 1065 LVSHFISYLRTKFALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAP 1124

Query: 2167 TPLSTSQKLSLLDSKLFEHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQ 2346
            TP    + LS  D      PS YR T+G LQY+TLTRPDI+FAVNK  QF+ +P+  HW 
Sbjct: 1125 TPGRLGRTLSQSDGMSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWM 1184

Query: 2347 ACKRLLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWS 2526
            A KR+LRYLKGT HLG+ F P   M ++ +SDADWASC DDRRST G+C+FLGSNL+ WS
Sbjct: 1185 AVKRILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSGYCVFLGSNLISWS 1244

Query: 2527 AKKQSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNV 2706
            + KQ +VS+SSAESEYR L   T ++VW+ SLL E+ + T SP ILWCDN SA  LA+N 
Sbjct: 1245 SSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPT-SPPILWCDNQSAAHLAANP 1303

Query: 2707 VFHARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERFQLLCSKL 2874
            VFH+R+KH+E+D+HF+REK+L +E+ + Y+ + +Q AD+FTK L   +F  L SKL
Sbjct: 1304 VFHSRSKHIELDLHFIREKVLRQELQICYVPSGDQLADIFTKHLPITQFCNLRSKL 1359



 Score =  220 bits (561), Expect = 1e-54
 Identities = 133/376 (35%), Positives = 195/376 (51%), Gaps = 21/376 (5%)
 Frame = +1

Query: 3169 MESSSPISTAAFIPHFTPLTIRLDRSNYNFWKVQVLTTVRAHGFDGFLLGNLPAPIQTIV 3348
            + SSS  ++ + +     L I+LDRSNY  WK Q+   V A+GF+ ++ G    P + + 
Sbjct: 12   LPSSSNHNSVSLLSLNHALPIKLDRSNYILWKTQMENVVYANGFEDYIEGTKSCPPKELP 71

Query: 3349 CDGTSVINPEYVLWMRRDQLLMSWMLSSISESMLGHISRCSTSHEVWSTFVNLFATQSKA 3528
               T  +NP++V W R D++++SWM S+++  ++G I    TSHE W     +F+  SKA
Sbjct: 72   ---TGDLNPDFVQWRRFDRMVLSWMYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKA 128

Query: 3529 RALQLRFMLQTLKKGDLSIDAYILKMKSIADDLNSIGHIIADDDLVLYILGGLGTDYESV 3708
            R +QLR   QT KKG  ++  YILKMK+I+D+L ++G  + + D +L +LGGLG DY S+
Sbjct: 129  RIMQLRLEFQTTKKGGDAMLDYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDYNSI 188

Query: 3709 VVNLTTRVDSISLQEAQFVLQTHEMRLQSQISSTPINVHTSFVSPSADSTPS--ANVAHL 3882
            V +LT R D +SL     +L THE RL  Q SS       SF S    S PS   N  H 
Sbjct: 189  VASLTAREDDLSLHSVHSILLTHEQRLHLQHSSP---TDPSFASAHMASVPSRQPNRPHQ 245

Query: 3883 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIT-------------------CQLCGKPNH 4005
            P                                                  CQLCGK  H
Sbjct: 246  PRHYHHPSRPQHQASSSSNRPPTRFHPQQPRNNHPIPSAHNKPHHLSTRPQCQLCGKFGH 305

Query: 4006 VASKCYKRFDISFKGSESSNSAPLSEQPQAYLTGPSAPSMVDSNWYFDSGATNHVTADLE 4185
             A KCY RFDI+++G   +N  PL++ P ++    +AP   DS W+FD+GAT+H++   +
Sbjct: 306  TAIKCYHRFDINYQG---NNGVPLAQAPFSHAMLAAAPDHQDS-WFFDTGATHHLSHSAQ 361

Query: 4186 NLSIKSDYRGSEQLTV 4233
             LS    Y G++Q+T+
Sbjct: 362  TLSCVQPYSGTDQVTI 377



 Score =  181 bits (459), Expect = 2e-42
 Identities = 86/183 (46%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
 Frame = +1

Query: 517  FSTIQCVC*KTISSKIQCLQTDWGGEYRSFKPILANLGIQFRHPCPHTHQQHGKAERKHL 696
            F T + +    + + I+C+Q+D GGE+ +FKP L   GI  +  CPHT QQ+G+AERK  
Sbjct: 585  FITFRKMVENQLQTTIKCIQSDNGGEFLAFKPYLEAHGILHQFSCPHTPQQNGRAERKIR 644

Query: 697  HIVEMGLSLLAQAGMPLKFWWDAFLASVFIINKLPSAVLANTSPHEKLFGLVPDYQFLKV 876
            H+VE GL+L+AQ+ +P K+W  AF  +V++IN LP+ +L   SP + LF  +P+Y  L+V
Sbjct: 645  HLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRV 704

Query: 877  FGCSCYPYLRPYNSHKFQFRSSRCLFLGYSPDHKGYKCLS-SDGKLYIACTVEFNEKEFP 1053
            FGC C+P LRPY  HK  +RS+ C+FLGY+P HKGY CL  S  ++YI+  V F+E  FP
Sbjct: 705  FGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFP 764

Query: 1054 YSA 1062
            + +
Sbjct: 765  FQS 767



 Score =  109 bits (272), Expect = 3e-20
 Identities = 70/218 (32%), Positives = 101/218 (46%), Gaps = 2/218 (0%)
 Frame = +2

Query: 2   DHSSKQILLAGVLKDGLYQLDLTHLKSLKSPSHPGXXXXXXXXXXXXXXXXXXXCTQFAG 181
           D  +K+ILL G L+DGLY+       S  SP                          F  
Sbjct: 440 DQVTKKILLKGWLRDGLYEF------SSSSPPRA-----------------------FVT 470

Query: 182 VSCTTDIATWHNKLGHPCNNVLSHVLQTLKIKSTP--SSIPFCQACKLGKLHQMHFSSQP 355
               +D A WH++LGHP   +LS  L +     T   + I  C  C L K H + +S   
Sbjct: 471 TGSFSDGAIWHSRLGHPAVPILSKALASCNPSVTLQINKIAPCIICPLAKSHSLPYSLSS 530

Query: 356 TKTTKPFQLLHSDLWGPSHVTSISGYRYYMHFVDDYTRYTWIFPLKSKYEALSIFQQFNV 535
           +  + P  L+H+DLWGP+  TSI+G RY++ F+DDY+R+TWI+ L +K +AL  F  F  
Sbjct: 531 SHASHPLALIHTDLWGPAPSTSITGARYFLIFIDDYSRHTWIYFLSTKDQALQSFITFRK 590

Query: 536 FVERQFHPKFNACKLIGEGNIVLLNLFLPILVFNFVIH 649
            VE Q        +    G  +    F P L  + ++H
Sbjct: 591 MVENQLQTTIKCIQSDNGGEFL---AFKPYLEAHGILH 625


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  575 bits (1483), Expect = e-179
 Identities = 289/546 (52%), Positives = 383/546 (70%)
 Frame = +1

Query: 1270 PTPCHSMVTRSKNGIIKPKLFSALTSSSSLEHEPYTVNGALADTRWSDAMLDEYNALVTK 1449
            PT  H MVTR+KNGI K K++      SS   EP T   A+ D+ W  AM  E++AL   
Sbjct: 684  PTNQHPMVTRAKNGISKKKVYF-----SSHISEPTTFTQAVKDSNWVLAMEKEFSALQRN 738

Query: 1450 NTWILVPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIK 1629
            NTW LVPP    ++I  KWV+++K + DGTV+R+KARLVA+GF Q  G+++FETFSPV+K
Sbjct: 739  NTWHLVPPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLVAQGFTQTLGLBYFETFSPVVK 798

Query: 1630 PCTIRLIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKAL 1809
              TIR+I  +A++  WS+ Q+DV NAFL+GDL+E V+M QP GF+++ +P++VCKL KAL
Sbjct: 799  ASTIRIILAVALSFNWSVHQLDVQNAFLHGDLEEHVFMQQPPGFINSQYPSHVCKLNKAL 858

Query: 1810 YGLKQAPRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPSA 1989
            YGLKQAPRAW+ KL   L   GF+AS +D+S+F       +L +LIYVDDIL TG+S + 
Sbjct: 859  YGLKQAPRAWYNKLSTSLLGWGFQASRADSSMFIHHSTHDVLILLIYVDDILVTGSSSAQ 918

Query: 1990 IDSVIQLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASPT 2169
            + S I  L   FAL+ LG VNYFLG+E  R+ +   L+Q KY  DLLS+T ML  K + T
Sbjct: 919  VSSFITRLNSSFALRDLGYVNYFLGIEVVRSGTMFHLSQHKYTQDLLSRTAMLDSKPATT 978

Query: 2170 PLSTSQKLSLLDSKLFEHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQA 2349
            P    Q LS LD + F   +LYRST+G LQYLTLTRPDISFAVNK  QF+  PT  HW A
Sbjct: 979  PGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATPTTTHWLA 1038

Query: 2350 CKRLLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWSA 2529
             KR+LRYLKGT   GI     T + +  ++DADWASC DDRRSTGG+ IFLG NL+ WS+
Sbjct: 1039 VKRILRYLKGTLSYGIQMQQSTSLDIHGYTDADWASCPDDRRSTGGYGIFLGPNLVSWSS 1098

Query: 2530 KKQSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNVV 2709
             KQ VVSRSSAESEYR+LA  T++++W+  +L E+ +S+ SP +LWCDN SA  LA+N V
Sbjct: 1099 NKQKVVSRSSAESEYRALASATSEMIWIQYVLQELCLSSSSPPLLWCDNKSAAHLAANPV 1158

Query: 2710 FHARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERFQLLCSKLPLCSS 2889
            FHARTKH+E+D+HF+R+ +L K++ ++Y+ + EQ AD+FTK +S+ +F    +KL +  S
Sbjct: 1159 FHARTKHIEMDLHFIRDHVLRKQLVIQYLPSAEQVADIFTKHISSSQFLSFRTKLSVVPS 1218

Query: 2890 AVKTTG 2907
             V   G
Sbjct: 1219 PVSLRG 1224



 Score =  190 bits (482), Expect = 3e-45
 Identities = 124/387 (32%), Positives = 189/387 (48%), Gaps = 7/387 (1%)
 Frame = +1

Query: 3094 KELEPVVLTFSSPATDIFPANHSGGMESSSPIS-TAAFIPHFTPLTIRLDRSNYNFWKVQ 3270
            KE+  ++   SS  +    A   G + SS+  + T   + H  P  I+LDR+NY  W+ Q
Sbjct: 100  KEITSILFMMSSTQSSGLQA---GTLPSSTGATQTMQMLNHALP--IKLDRNNYILWRTQ 154

Query: 3271 VLTTVRAHGFDGFLLGNLPAPIQTIVCDGTSVINPEYVLWMRRDQLLMSWMLSSISESML 3450
            +   V A+GF+  + G    P Q      T   NP++V+W R D++++SW+ SS++  ++
Sbjct: 155  MENVVFANGFEDHIEGLKICPPQKTSSGET---NPDFVMWRRFDRMILSWIYSSLTPEIM 211

Query: 3451 GHISRCSTSHEVWSTFVNLFATQSKARALQLRFMLQTLKKGDLSIDAYILKMKSIADDLN 3630
            G I    +SH  W     +F+  S+AR +QLR   QT +KG L++  YILK+KS+AD+L 
Sbjct: 212  GQIVGYQSSHAAWFALERIFSASSRARVMQLRLEFQTTRKGSLTMMEYILKLKSLADNLA 271

Query: 3631 SIGHIIADDDLVLYILGGLGTDYESVVVNLTTRVDSISLQEAQFVLQTHEMRLQSQISST 3810
            +IG  + D D +L +LGGLG DY S+V +LT    S   Q   F     E  + S   +T
Sbjct: 272  AIGEPVTDRDQILQLLGGLGADYNSIVASLTAPFYSPMKQRLSFQNSVAEDNVISANLAT 331

Query: 3811 PINVHTSFVSPSADSTPSANVAHLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITCQLC 3990
            P   H +    S  +  S                                      CQLC
Sbjct: 332  PQYQHFNNKRSSGQNRQSG-----------------FNTRRGTNGGRSQSSQHRPQCQLC 374

Query: 3991 GKPNHVASKCYKRFDISFKG------SESSNSAPLSEQPQAYLTGPSAPSMVDSNWYFDS 4152
            GK  H   +CY RFDI+F+G      +  +N      Q QA +  PS  S  D  W+FD+
Sbjct: 375  GKFGHTVVRCYHRFDINFQGYNPNMDTVQTNKPNAKNQVQAMMASPSTIS--DEAWFFDT 432

Query: 4153 GATNHVTADLENLSIKSDYRGSEQLTV 4233
            GAT+H++  ++ LS    Y G++++ V
Sbjct: 433  GATHHLSQSIDPLSDVQPYMGNDKVIV 459



 Score =  172 bits (435), Expect = 1e-39
 Identities = 79/155 (50%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
 Frame = +1

Query: 601  SFKPILANLGIQFRHPCPHTHQQHGKAERKHLHIVEMGLSLLAQAGMPLKFWWDAFLASV 780
            +F   LA  GI+ +  CP+T +Q+G+AERK  HI+E GL+LLA A +P KFW  AF  ++
Sbjct: 462  AFSSYLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTTI 521

Query: 781  FIINKLPSAVLANTSPHEKLFGLVPDYQFLKVFGCSCYPYLRPYNSHKFQFRSSRCLFLG 960
            F+IN+LP+ VL   SP + LFG  P+Y   K+FGC CYPY+RPYN +K  +RSS+C+FLG
Sbjct: 522  FLINRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLG 581

Query: 961  YSPDHKGYKCLSS-DGKLYIACTVEFNEKEFPYSA 1062
            YS +HKGY CL+   G+LY+   V F+E  FP+ +
Sbjct: 582  YSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPFQS 616


>gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 539

 Score =  537 bits (1384), Expect = e-173
 Identities = 281/543 (51%), Positives = 370/543 (68%), Gaps = 4/543 (0%)
 Frame = +1

Query: 1288 MVTRSKNGIIKPKLFSALTSSSSLEHEPYTVNGALADTRWSDAMLDEYNALVTKNTWILV 1467
            M TRSK+G   P++  +L  + S   EP TV  ALAD  W  AM  EYNAL+  +TW LV
Sbjct: 1    MQTRSKSGFHNPRIHPSLFLAHS---EPKTVKQALADPNWFSAMQQEYNALMLNHTWDLV 57

Query: 1468 PPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIKPCTIRL 1647
                +   +  KWVFR+K  ADG++++ KARLVA+GF QV G DF ETFSPVIKP TIR+
Sbjct: 58   SLPSDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIRI 117

Query: 1648 IFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKALYGLKQA 1827
            I TLA+TN W++ Q+DV+NAFLNG L+ET+YM QP GF      + VCKL KALYGLKQA
Sbjct: 118  ILTLALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGF-EAGDKSLVCKLNKALYGLKQA 176

Query: 1828 PRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPSAIDSVIQ 2007
            PR WF KLK  L+  GF+AS  D SLF  +     +F+L+YVDDI+ TG+S   I  +  
Sbjct: 177  PRQWFNKLKLTLTRFGFQASKCDPSLFQYQHQTHTIFILVYVDDIIITGSSSLLIQQITN 236

Query: 2008 LLGQKFALKTLGEVNYFLGLEAAR-NSSGLILTQSKYVHDLLSKTNMLHCKASPTPLSTS 2184
             L   F+LK LG ++YFLG+E        L+LTQSKY+ DLL KTN+     +P+P+ ++
Sbjct: 237  QLDSIFSLKQLGSLDYFLGIEVKHLPDKSLVLTQSKYIRDLLFKTNLAEAHGAPSPMFSN 296

Query: 2185 QKLSLLDSKLFEHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQACKRLL 2364
             KLS   +  F  P+ +RS +G LQY TLTRP+ISFAVNK+ QF+  P  +HW A KR+L
Sbjct: 297  CKLSRSGNDFFHDPTFFRSVVGALQYATLTRPEISFAVNKVCQFMATPLDSHWVAVKRIL 356

Query: 2365 RYLKGTSHLGIAFTPVT---RMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWSAKK 2535
            +YLKGT   G+   P      + + AF DADWAS +DDRRST G  IF G NL+ W ++K
Sbjct: 357  KYLKGTLSYGLHMQPAAVNGPISLTAFCDADWASDIDDRRSTSGSAIFFGPNLISWWSRK 416

Query: 2536 QSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNVVFH 2715
            Q V++RSS E+EYRS+A  + ++ W+ +LL E+ V   +P++L CDN SAVA+A N VFH
Sbjct: 417  QRVIARSSTEAEYRSIAQASAELTWIQALLQELKVPFSTPTLL-CDNQSAVAIAHNPVFH 475

Query: 2716 ARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERFQLLCSKLPLCSSAV 2895
            ++TKH+EIDV FVR+K+LSK++ V +I A +Q ADL TKPLSA RF++L  KL + S  V
Sbjct: 476  SKTKHMEIDVFFVRDKVLSKQLLVYHIPALDQWADLLTKPLSAARFEVLWDKLKVQSFCV 535

Query: 2896 KTT 2904
            KT+
Sbjct: 536  KTS 538


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  566 bits (1459), Expect = e-173
 Identities = 272/524 (51%), Positives = 371/524 (70%)
 Frame = +1

Query: 1282 HSMVTRSKNGIIKPKLFSALTSSSSLEHEPYTVNGALADTRWSDAMLDEYNALVTKNTWI 1461
            H M+TR+K+GI+KPK+F A         EP +V+ AL    W  AM+ EY+AL   NTW 
Sbjct: 914  HPMITRAKSGIVKPKIFIAAI------REPSSVSAALQQDEWKKAMVAEYDALQRNNTWS 967

Query: 1462 LVPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIKPCTI 1641
            LVP       I  KWV++ K   DGTV+++KARLVA+GF Q AG DF ETFSPV+KP T+
Sbjct: 968  LVPLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFDFTETFSPVVKPSTV 1027

Query: 1642 RLIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKALYGLK 1821
            R++FT+A++  W+I+Q+DV+NAFLNGDL+E V+M QP+GF+   +P  VC+L KALYGLK
Sbjct: 1028 RVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFIDEQNPNLVCRLHKALYGLK 1087

Query: 1822 QAPRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPSAIDSV 2001
            QAPRAWF KL   L S GF ++ SD SLF +     + +VL+YVDDIL  G+  +AI S+
Sbjct: 1088 QAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYVDDILVIGSDTAAITSL 1147

Query: 2002 IQLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASPTPLST 2181
            I  L  +F+LK LGEV+YFLG++ +  ++GL L+Q+KY+ DLL KT M+HCK + TPL T
Sbjct: 1148 IAQLNSEFSLKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPT 1207

Query: 2182 SQKLSLLDSKLFEHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQACKRL 2361
              KL + D    E    YRST+G LQY+T+TRP++SF+VNK+ QF+  PT  HW+  KR+
Sbjct: 1208 GLKLRVGDGDPVEDLHGYRSTVGALQYVTITRPELSFSVNKVCQFMQNPTEEHWKVVKRI 1267

Query: 2362 LRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWSAKKQS 2541
            LRYL+GT   G+     + + +  F DADWAS LDDRRST GHC+FLG NL+ W +KKQ 
Sbjct: 1268 LRYLQGTLQHGLHLKKSSNLDLIGFCDADWASDLDDRRSTSGHCVFLGPNLISWQSKKQH 1327

Query: 2542 VVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNVVFHAR 2721
            +VSRSS E EYRSLA    ++ WL SLL E+ +    P ++WCDN+S V L++N V HAR
Sbjct: 1328 IVSRSSIEIEYRSLAGLVAEITWLRSLLSELQLPLAKPPLVWCDNLSTVLLSANPVLHAR 1387

Query: 2722 TKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERF 2853
            TKH+E+D++FVREK++ KE++VR++ + +Q AD+ TK +S+ +F
Sbjct: 1388 TKHIELDLYFVREKVIRKEVEVRHVPSADQLADVLTKTVSSTQF 1431



 Score =  216 bits (550), Expect = 3e-53
 Identities = 101/167 (60%), Positives = 125/167 (74%)
 Frame = +1

Query: 559  KIQCLQTDWGGEYRSFKPILANLGIQFRHPCPHTHQQHGKAERKHLHIVEMGLSLLAQAG 738
            KI+ LQTDWGGE+R+F+  LA  GI  R  CPHT QQ+G AERKH  IVE GL+LL  A 
Sbjct: 642  KIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTAS 701

Query: 739  MPLKFWWDAFLASVFIINKLPSAVLANTSPHEKLFGLVPDYQFLKVFGCSCYPYLRPYNS 918
            +PLKFW ++F   V++ N+LP+A+L +  P E LF  +PDY FLKVFGCSC+P LRPYN+
Sbjct: 702  LPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNT 761

Query: 919  HKFQFRSSRCLFLGYSPDHKGYKCLSSDGKLYIACTVEFNEKEFPYS 1059
            HK Q+RS  C FLGYS  HKGYKC+SS+G++YI+  V FNE  FPYS
Sbjct: 762  HKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIFNETSFPYS 808



 Score =  133 bits (334), Expect = 1e-27
 Identities = 80/227 (35%), Positives = 115/227 (50%), Gaps = 11/227 (4%)
 Frame = +2

Query: 2    DHSSKQILLAGVLKDGLYQLDLTHL-----KSL-KSPSHPGXXXXXXXXXXXXXXXXXXX 163
            D  ++ +L+ G ++DGLY  D +HL     +SL KSPS                      
Sbjct: 465  DQVTQAVLMVGKVRDGLYAFDSSHLALRPTQSLSKSPS--------------------VV 504

Query: 164  CTQFAGVSCTTDIAT----WHNKLGHPCNNVLSHVLQTLKIKS-TPSSIPFCQACKLGKL 328
             + F+   CTT +++    WH +LGHP    + +VL    +         FC +C LGK+
Sbjct: 505  ASSFSSKVCTTSLSSTFDLWHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKI 564

Query: 329  HQMHFSSQPTKTTKPFQLLHSDLWGPSHVTSISGYRYYMHFVDDYTRYTWIFPLKSKYEA 508
            H+  FS   T  TKP +L+H DLWGP+ V S SGYRYY+HFVD ++R++WIF L++K EA
Sbjct: 565  HRFPFSLSHTTYTKPLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEA 624

Query: 509  LSIFQQFNVFVERQFHPKFNACKLIGEGNIVLLNLFLPILVFNFVIH 649
            +  F  F   VE QF  K  + +    G       F   L  N ++H
Sbjct: 625  IKTFVNFKTQVELQFDLKIKSLQTDWGGE---FRAFQSYLAENGIVH 668



 Score = 94.7 bits (234), Expect = 7e-16
 Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 6/248 (2%)
 Frame = +1

Query: 3151 ANHSGGMESSSP--ISTAAFIP-HFT-PLTIRLDRSNYNFWKVQVLTTVRAHGFDGFLLG 3318
            AN S  + + +P  +S+  F+P +F   L+++LD  N+  WK Q+++ +R +G   F+  
Sbjct: 3    ANISPAIANPNPNALSSTRFVPINFNHSLSVKLDNKNFLIWKQQIVSAIRGYGLQKFVFS 62

Query: 3319 NLPAPIQTIVCDGTSVINPEYVLWMRRDQLLMSWMLSSISESMLGHISRCSTSHEVWSTF 3498
            +                +PE +  + +     S   + I+   LG       SH   S +
Sbjct: 63   DDEVQFN---------FSPEKMRDLEKQLRNSSSGNNRINYCSLGF------SHLFLSQY 107

Query: 3499 V--NLFATQSKARALQLRFMLQTLKKGDLSIDAYILKMKSIADDLNSIGHIIADDDLVLY 3672
                 FA+Q++A+A Q +  LQ  KKG  +ID Y+ K+K   D L S+G  ++  D V  
Sbjct: 108  FLEQYFASQTRAKAKQFKTQLQHTKKGGSTIDEYLAKIKVCVDSLASVGVSLSTKDHVES 167

Query: 3673 ILGGLGTDYESVVVNLTTRVDSISLQEAQFVLQTHEMRLQSQISSTPINVHTSFVSPSAD 3852
            IL GL  DYES V ++  R D  S++E + +L  HE R++               + S D
Sbjct: 168  ILDGLPNDYESFVTSVILRNDDFSVEEIEALLMAHESRVEKN-------------NNSLD 214

Query: 3853 STPSANVA 3876
            S+PSA+VA
Sbjct: 215  SSPSAHVA 222



 Score = 73.6 bits (179), Expect = 2e-09
 Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
 Frame = +1

Query: 3979 CQLCGKPNHVASKCYKRFDISFKGSE---SSNSAP---LSEQPQAYLTGPSAPSMVDSNW 4140
            CQLCGK  HV ++CY RFD +F+  +   S NS+P    S  PQ     P++    D NW
Sbjct: 310  CQLCGKIGHVVAQCYYRFDHTFQVPQNLSSRNSSPRAYYSFSPQVNGVIPTSEVFSDDNW 369

Query: 4141 YFDSGATNHVTADLENLSIKSDYRGSEQLTV 4233
            Y DSGA+NHVT + ENL   +++ G  Q+ V
Sbjct: 370  YPDSGASNHVTPNPENLMKSAEFAGQNQVHV 400


>gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 538

 Score =  537 bits (1383), Expect = e-173
 Identities = 289/545 (53%), Positives = 375/545 (68%), Gaps = 6/545 (1%)
 Frame = +1

Query: 1288 MVTRSKNGIIKPKLFSALTSSSSLEH-EPYTVNGALADTRWSDAMLDEYNALVTKNTWIL 1464
            M TR+K GI+KP+L   L     L H EP     ALA   W  AM  EYNAL+   TW L
Sbjct: 1    MTTRAKAGIVKPRLQPTLL----LTHIEPKNTKQALASDTWLAAMKQEYNALLNNGTWTL 56

Query: 1465 VPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIKPCTIR 1644
            V   P  + I  KWVFRIK  +DGTV ++KARLVA+GF Q  G D+ ETFSPV+KP TIR
Sbjct: 57   VSLPPNKTAIGCKWVFRIKENSDGTVNKYKARLVAKGFHQQFGSDYNETFSPVVKPVTIR 116

Query: 1645 LIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKALYGLKQ 1824
            LI TLA+T+ WSIQQ+DV+NAFLNG+L+E VYM+QP GF S +  T VCKL KA+YGLKQ
Sbjct: 117  LILTLALTHHWSIQQLDVNNAFLNGNLQEEVYMSQPPGFES-SDKTLVCKLHKAIYGLKQ 175

Query: 1825 APRAWFTKLKEFLSSLGFKASVSDTSLF-FKRDNGVLLFVLIYVDDILFTGNSPSAIDSV 2001
            APRAWF KLK  L  L F+ S  D SLF +  DN V +++L+YVDDI+ TGN+ S + ++
Sbjct: 176  APRAWFDKLKTTLFQLNFQISKCDPSLFVYSHDNNV-IYILVYVDDIIITGNNSSTLQNI 234

Query: 2002 IQLLGQKFALKTLGEVNYFLGLEAARNSSG-LILTQSKYVHDLLSKTNMLHCKASPTPLS 2178
            I  L   F+LK LG +++FLG+E   N+ G L LTQSKY+ DLL++TNM +     +P+ 
Sbjct: 235  IAQLNSAFSLKDLGRLDFFLGIEVKSNTDGSLTLTQSKYIRDLLNRTNMENSNPISSPMV 294

Query: 2179 TSQKLSLLDSKLFEHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQACKR 2358
            +  KLS   S+ F   +LYRS +G LQY T+TRP+ISF+VNK+ QF+  P   HW A KR
Sbjct: 295  SGCKLSRTGSEKFLDVTLYRSVVGALQYATITRPEISFSVNKVCQFMSNPLEQHWSAVKR 354

Query: 2359 LLRYLKGTSHLGIAFTPV---TRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWSA 2529
            +LRYLKGT  LG+   P    + + + A+ DADWAS  DDRRST G  IF+G NL+ W +
Sbjct: 355  ILRYLKGTMFLGLHLQPAPSNSPLSIRAYCDADWASDPDDRRSTSGASIFVGPNLISWWS 414

Query: 2530 KKQSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNVV 2709
            KKQ+VV+RSSAE+EYRSLA  T +V+W+ +LL E+ VS  +P +++CDNMS VALA N V
Sbjct: 415  KKQTVVARSSAEAEYRSLALATAEVLWIQTLLSELHVSHHTP-VVYCDNMSTVALAHNPV 473

Query: 2710 FHARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERFQLLCSKLPLCSS 2889
             HARTKH+E+D+ FVREK+ +  + V ++ A +Q AD+ TK LS  RF  L +KL L  S
Sbjct: 474  LHARTKHMELDLFFVREKVAANSLHVVHVPAIDQYADILTKALSPSRFCELRTKLKLVDS 533

Query: 2890 AVKTT 2904
            + + T
Sbjct: 534  SPQPT 538


>ref|XP_008365969.1| PREDICTED: uncharacterized protein LOC103429605 [Malus domestica]
          Length = 1188

 Score =  558 bits (1439), Expect = e-173
 Identities = 282/544 (51%), Positives = 378/544 (69%), Gaps = 2/544 (0%)
 Frame = +1

Query: 1282 HSMVTRSKNGIIKP--KLFSALTSSSSLEHEPYTVNGALADTRWSDAMLDEYNALVTKNT 1455
            HSM TRS++G++KP  K    +  ++SL  EP   + A+    W +AM+ E+NAL    T
Sbjct: 634  HSMTTRSQSGVLKPNPKYAMHVAVNNSLV-EPTCFSQAVKHQEWREAMVQEFNALQRCGT 692

Query: 1456 WILVPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIKPC 1635
            W LVP S +M+V+ NKWVF+IKRRADGT+ER KARLVA GF Q AGVD+ ETFSPV+K  
Sbjct: 693  WSLVPYSSQMNVLPNKWVFKIKRRADGTIERHKARLVANGFHQKAGVDYTETFSPVVKHS 752

Query: 1636 TIRLIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKALYG 1815
            TIRL+ +LAV+ +W ++Q+DV NAFL+G L E VYM QP GF+    P +VCKLQ++LYG
Sbjct: 753  TIRLVLSLAVSKKWXVRQLDVQNAFLHGYLHEHVYMXQPSGFIDKQFPHHVCKLQRSLYG 812

Query: 1816 LKQAPRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPSAID 1995
            LKQAPRAWF +  +FL  LGF  S    SLF     GV + +LIYVDDIL TGNSP  + 
Sbjct: 813  LKQAPRAWFQRFSDFLFQLGFDESTCXYSLFVFNKRGVYIILLIYVDDILITGNSPRQMA 872

Query: 1996 SVIQLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASPTPL 2175
             +I+ LG  F++K LG ++YFLG+E   N   + L QSKY  DL+++T     K   TP+
Sbjct: 873  HLIKKLGSLFSMKDLGPLSYFLGIEVKYNGDAMHLCQSKYALDLJTRTKFTXAKPISTPV 932

Query: 2176 STSQKLSLLDSKLFEHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQACK 2355
            S+ QKLS      + +  +YRS +G LQYLT+TRPD+S+AVN++ QF+H P   HW A K
Sbjct: 933  SSGQKLSAYVGDPYANXEMYRSVVGALQYLTITRPDLSYAVNQICQFMHSPKNTHWMAVK 992

Query: 2356 RLLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWSAKK 2535
            R+LRYLK T + G+ + P T  L  A+SDAD+A   D R STGG C++LGS+L+ WS+KK
Sbjct: 993  RILRYLKATYNHGLLYKPGTATLT-AYSDADYAGNPDTRHSTGGFCVYLGSSLVSWSSKK 1051

Query: 2536 QSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNVVFH 2715
            Q  VSRSSAE+EYR LA T  ++ WL SL  ++ +    P+I WCDN+S++ALASN VFH
Sbjct: 1052 QKTVSRSSAEAEYRQLAYTAAELSWLRSLYKDLHLHLVPPTI-WCDNISSIALASNPVFH 1110

Query: 2716 ARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERFQLLCSKLPLCSSAV 2895
            +RTKH+E+D H+VREK++ K++ V Y+ +++Q AD+FTK LS+ RF+ L SKLP+    V
Sbjct: 1111 SRTKHLEVDYHYVREKVVRKQLFVSYVCSQDQLADIFTKGLSSSRFKFLVSKLPVVPPPV 1170

Query: 2896 KTTG 2907
               G
Sbjct: 1171 SLRG 1174



 Score =  147 bits (371), Expect = 4e-32
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 14/360 (3%)
 Frame = +1

Query: 3184 PISTAAFIPHFTPLTIRLDRSNYNFWKVQVLTTVRAHGFDGFLLGNLPAPIQTIVCDGTS 3363
            P     F P  T + I+LDR+NY  W  Q+L  +++    G++ G L  P + +   G++
Sbjct: 11   PNPQTTFQPFSTIVNIKLDRTNYPLWLAQILPILKSRDLMGYVDGTLVCPPKHVA--GST 68

Query: 3364 VINPEYVLWMRRDQLLMSWMLSSISESMLGHISRCSTSHEVWSTFVNLFATQSKARALQL 3543
               P Y  W+++D +++SW+  S++ S+L  ++   T+   W      +A+ S+   L L
Sbjct: 69   TXXPAYTXWVQQDXMILSWINGSLTASVLSVVASKRTARATWEALEQRYASTSQNXILFL 128

Query: 3544 RFMLQTLKKGDLSIDAYILKMKSIADDLNSIGHIIADDDLVLYILGGLGTDYESVVVNLT 3723
            R  L   KKGDLS+  Y+ +M +IAD+L   G  ++DD+LV  +L  LG  YE  V    
Sbjct: 129  RNELLQTKKGDLSVADYLDRMNAIADNLALAGQPVSDDELVQIVLNNLGPXYEMTVSAAQ 188

Query: 3724 TRVDSISLQEAQFVLQTHEMRLQSQ----ISSTPINVHTSFVSPSADSTPSANVAHLP-- 3885
             R + I     + +L T E RL       +    +N   +               +    
Sbjct: 189  ARDNPIPYPTLESLLLTTERRLAEHNVPLVEGATVNAFVASKGREGGXPRGGGRGNFSNR 248

Query: 3886 --XXXXXXXXXXXXXXXXXXXXXXXXXXXXXITCQLCGKPNHVASKCYKRFDISFKGS-- 4053
                                           I CQ+CGKP H A  CY+R + +F+G   
Sbjct: 249  GGAQRGPNPRHNNASQNNQGTGDRFVSCGDRIICQICGKPGHPALDCYQRMNTAFEGRIP 308

Query: 4054 ----ESSNSAPLSEQPQAYLTGPSAPSMVDSNWYFDSGATNHVTADLENLSIKSDYRGSE 4221
                 +  S+P++   Q            + +W  D+GA  H+T D++NL+   +Y G+E
Sbjct: 309  AKRLXAMTSSPITLNKQQ-----------NGSWLLDTGANAHITPDIQNLAXPKEYHGNE 357


>dbj|BAH94406.1| Os08g0544300 [Oryza sativa Japonica Group]
          Length = 821

 Score =  545 bits (1404), Expect = e-172
 Identities = 267/534 (50%), Positives = 375/534 (70%), Gaps = 5/534 (0%)
 Frame = +1

Query: 1294 TRSKNGIIKPKLFSALTS---SSSLEHEPYTVNGALADTRWSDAMLDEYNALVTKNTWIL 1464
            TR ++GI K K+++  T    + +   EP ++  A+ +  W +AM  EY AL+   TW L
Sbjct: 279  TRLQSGIRKEKVYTDGTVKWLNFTSSGEPQSLEEAVNNKHWKEAMDAEYMALIENKTWHL 338

Query: 1465 VPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIKPCTIR 1644
            VPP    +VI  KWV+++KR+ADG+++R+KARLVA+GF+Q  G+D+ +TFSPV+K  TIR
Sbjct: 339  VPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIR 398

Query: 1645 LIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKALYGLKQ 1824
            ++ +LAV+  WS++Q+DV NAFL+G L+E VYM QP G+   + P YVCKL KALYGLKQ
Sbjct: 399  IVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMEQPPGYEKKSMPNYVCKLDKALYGLKQ 458

Query: 1825 APRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPSAIDSVI 2004
            APRAW+++L   LS LGF  S +DTSLFF +   V +F+LIYVDDI+   + P A  +++
Sbjct: 459  APRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIMASSVPDATSTLL 518

Query: 2005 QLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASPTPLSTS 2184
            Q L + FALK LG+++YFLG+E  +   GL+L+Q KY  DLL +  M  CK   TPLSTS
Sbjct: 519  QELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPLSTS 578

Query: 2185 QKLSLLDSKLF--EHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQACKR 2358
            +KLS+ +  L   +  + YRS +G LQYLTLTRPDISF++NK+ QFLH PT  HW A KR
Sbjct: 579  EKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHWAAVKR 638

Query: 2359 LLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWSAKKQ 2538
            +LRY+K T   G+ F     +LV  FSDADWA   DDRRSTGG  +FLG NL+ WSA+KQ
Sbjct: 639  ILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQ 698

Query: 2539 SVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNVVFHA 2718
            + VSRSS E+EY++LA+ T +++W+ +LL E+GV +   + LWCDN+ A  L++N +FHA
Sbjct: 699  ATVSRSSTEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPIFHA 758

Query: 2719 RTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERFQLLCSKLPL 2880
            RTKH+E+D HFVRE++  K +++ YI+ ++Q AD FTK +   + ++  + L L
Sbjct: 759  RTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAIPVRQMEMFKNNLNL 812



 Score =  121 bits (303), Expect = 3e-24
 Identities = 55/110 (50%), Positives = 78/110 (70%), Gaps = 1/110 (0%)
 Frame = +1

Query: 739  MPLKFWWDAFLASVFIINKLPSAVLANTSPHEKLFGLVPDYQFLKVFGCSCYPYLRPYNS 918
            MP+KFW +A LA+ ++IN+ PS V+    P E+LF   P+Y  L++FGC+ +P LRPYN 
Sbjct: 1    MPIKFWDEAVLAAAYLINRTPSKVINFACPLEQLFKEKPNYTALRIFGCAVWPNLRPYNK 60

Query: 919  HKFQFRSSRCLFLGYSPDHKGYKCLS-SDGKLYIACTVEFNEKEFPYSAM 1065
            HK  FRS RC+FLGYS  HKG+KCL  + G++Y++  V F+E  FP+S +
Sbjct: 61   HKLAFRSKRCVFLGYSNLHKGFKCLEIATGRVYVSRDVTFDESIFPFSEL 110


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  562 bits (1449), Expect = e-172
 Identities = 274/525 (52%), Positives = 375/525 (71%), Gaps = 6/525 (1%)
 Frame = +1

Query: 1294 TRSKNGIIKPKLFSALT----SSSSLEHEPYTVNGALADTRWSDAMLDEYNALVTKNTWI 1461
            TR ++GI KPK F+  T    ++++   EP +V+ ALAD +W  AM  E+ AL   NTW 
Sbjct: 896  TRLQHGISKPKQFTDGTVRYGNAAARITEPSSVSEALADPQWRAAMEAEFQALQKNNTWT 955

Query: 1462 LVPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIKPCTI 1641
            LVPP    ++I  KWVF++K  ADG+++R KARLVA+GF+Q  G+D+ +TFSPV+K  TI
Sbjct: 956  LVPPDRTRNLIDCKWVFKVKYNADGSIDRLKARLVAKGFKQQYGIDYDDTFSPVVKHSTI 1015

Query: 1642 RLIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKALYGLK 1821
            RL+ +LAV+ +WS++Q+DV NAFL+G L+ETVYM QP GF  TTHP Y C LQK+LYGLK
Sbjct: 1016 RLVLSLAVSQKWSLRQLDVQNAFLHGILEETVYMKQPPGFADTTHPNYHCHLQKSLYGLK 1075

Query: 1822 QAPRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPSAIDSV 2001
            Q PRAW+++L E L SLGF  S +D SLF    +   +++L+YVDDI+ TG+SP AID+V
Sbjct: 1076 QRPRAWYSRLSEKLQSLGFVPSKADVSLFIYNAHSTAIYILVYVDDIIITGSSPHAIDNV 1135

Query: 2002 IQLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASPTPLST 2181
            +  L   FA+K LG+++YFLG+E  R   GL+L Q KY  DLL +  M  CK   TP++T
Sbjct: 1136 LAKLKDDFAIKDLGDLHYFLGIEVHRKGDGLLLCQEKYARDLLKRVGMECCKPVHTPVAT 1195

Query: 2182 SQKLSLLDSKLF--EHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQACK 2355
            S+KLS     L   E  + YRS +G LQYLTLTRPD+S+A+N++ QFLH PT  HW A K
Sbjct: 1196 SEKLSASAGTLLSPEETTKYRSVVGALQYLTLTRPDLSYAINRVCQFLHAPTDLHWTAVK 1255

Query: 2356 RLLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWSAKK 2535
            R+LR ++ T  LG+   P   +++ AFSDADWA C DDR+STGG+ +FLG NL+ W++KK
Sbjct: 1256 RILRNIQHTIGLGLTIRPSLSLMLSAFSDADWAGCPDDRKSTGGYALFLGPNLISWNSKK 1315

Query: 2536 QSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNVVFH 2715
            QS VSRSS E+EY+++A+ T +V+WL SLLHE+G+       LWCDN+ A  L+S  +F+
Sbjct: 1316 QSTVSRSSTEAEYKAMANATAEVIWLQSLLHELGIRLTGIPRLWCDNLGATYLSSKPIFN 1375

Query: 2716 ARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAER 2850
            ARTKH+E+D HFVR+++LSK++D+R I+  +Q AD FTK L+  R
Sbjct: 1376 ARTKHIEVDFHFVRDRVLSKKLDIRLISTNDQVADGFTKALTIGR 1420



 Score =  210 bits (534), Expect = 3e-51
 Identities = 97/184 (52%), Positives = 129/184 (70%), Gaps = 1/184 (0%)
 Frame = +1

Query: 517  FSTIQCVC*KTISSKIQCLQTDWGGEYRSFKPILANLGIQFRHPCPHTHQQHGKAERKHL 696
            F   Q +  +    KI   Q+DWGGEY         +GI  +  CPHTHQQ+G AERKH 
Sbjct: 562  FCEFQHLVERMFGRKIIAFQSDWGGEYEKLNAHFKTIGIHHQVSCPHTHQQNGAAERKHR 621

Query: 697  HIVEMGLSLLAQAGMPLKFWWDAFLASVFIINKLPSAVLANTSPHEKLFGLVPDYQFLKV 876
            HIVE+GL+LLAQ+ MPLK+W  AFLA+V++IN+ PS  +A+ +P  KL G  PDY  L++
Sbjct: 622  HIVEVGLALLAQSSMPLKYWDHAFLAAVYLINRTPSKTIAHDTPLHKLTGATPDYSSLRI 681

Query: 877  FGCSCYPYLRPYNSHKFQFRSSRCLFLGYSPDHKGYKCLS-SDGKLYIACTVEFNEKEFP 1053
            FGC+C+P LRPYN HK QFRS+RC+FLGYS  HKG+KCL  S G++YI+  V F+E  FP
Sbjct: 682  FGCACWPNLRPYNQHKLQFRSTRCVFLGYSNMHKGFKCLDISTGRIYISRDVVFDEHVFP 741

Query: 1054 YSAM 1065
            ++++
Sbjct: 742  FASL 745



 Score =  133 bits (335), Expect = 1e-27
 Identities = 77/220 (35%), Positives = 120/220 (54%), Gaps = 4/220 (1%)
 Frame = +1

Query: 3169 MESSSPISTAAFIPHFT-PLTIRLDRSNYNFWKVQVLTTVRAHGFDGFLLGNLPAPIQTI 3345
            M   S +ST+A    F  P++ +L + NY  WK QVL  +RA   D  L G    P +TI
Sbjct: 1    MAMQSSLSTSAIPTSFAIPVSEKLTKGNYLLWKAQVLPAIRAAQLDDILTGVEICPPKTI 60

Query: 3346 --VCDGT-SVINPEYVLWMRRDQLLMSWMLSSISESMLGHISRCSTSHEVWSTFVNLFAT 3516
                D T +V NP Y  W+ RDQ ++ ++LSS+S  +L  +  CSTS  VW+T   ++++
Sbjct: 61   SDASDRTVTVANPAYGRWIARDQAVLGYLLSSLSREVLSSVVNCSTSASVWTTLSEMYSS 120

Query: 3517 QSKARALQLRFMLQTLKKGDLSIDAYILKMKSIADDLNSIGHIIADDDLVLYILGGLGTD 3696
             S+AR +  R  L T KKG  S+  Y  KM+  AD+L + G  + D++ V ++L GL  D
Sbjct: 121  HSRARKVNTRIALATTKKGASSVAEYFAKMRGFADELGAAGKPLDDEEFVSFLLTGLDED 180

Query: 3697 YESVVVNLTTRVDSISLQEAQFVLQTHEMRLQSQISSTPI 3816
            +  +V  +  R D I+  +    L ++E R+  Q  S+ +
Sbjct: 181  FNPLVTAVVARSDPITPGDLYTQLLSYENRMHLQTGSSSL 220



 Score = 97.8 bits (242), Expect = 8e-17
 Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2   DHSSKQILLAGVLKDGLYQLDLTHLKSLKSPSHPGXXXXXXXXXXXXXXXXXXXCTQFAG 181
           D  +K +LL G  +DGLY L          P HP                          
Sbjct: 417 DRQTKAVLLHGKCRDGLYPL----------PPHPDLRLKHNFS----------------- 449

Query: 182 VSCTTDIATWHNKLGHPCNNVLSHVLQT--LKIKSTPSSIPFCQACKLGKLHQMHFSSQP 355
            S    +  WH +LGHP  +++  V+    L   S  S+   C AC   K HQ+ ++   
Sbjct: 450 -STRVPLEHWHKRLGHPSRDIVHRVISNNNLPCLSNNSTTSVCDACLQAKAHQLPYTISM 508

Query: 356 TKTTKPFQLLHSDLWGPSHVTSISGYRYYMHFVDDYTRYTWIFPLKSKYEALSIFQQFNV 535
           ++++ P  L+ SD++GP+ + S   Y+YY+ F+DDY+++TWI+ L+ K +    F +F  
Sbjct: 509 SQSSAPLMLIFSDVFGPA-IDSFGRYKYYVSFIDDYSKFTWIYLLRHKSDVYKSFCEFQH 567

Query: 536 FVERQFHPKFNACKLIGEGNIVLLN 610
            VER F  K  A +    G    LN
Sbjct: 568 LVERMFGRKIIAFQSDWGGEYEKLN 592


>ref|XP_009359358.1| PREDICTED: uncharacterized protein LOC103949948 [Pyrus x
            bretschneideri]
          Length = 1243

 Score =  556 bits (1433), Expect = e-172
 Identities = 285/544 (52%), Positives = 373/544 (68%), Gaps = 2/544 (0%)
 Frame = +1

Query: 1282 HSMVTRSKNGIIKP--KLFSALTSSSSLEHEPYTVNGALADTRWSDAMLDEYNALVTKNT 1455
            H + TRSK+GI KP  K    LT       EP   + A+    W +AM+ E+NAL    T
Sbjct: 498  HVITTRSKSGIHKPNPKYVMHLTVDK-FPVEPTCFSQAIKSQEWRNAMVQEFNALQKCGT 556

Query: 1456 WILVPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIKPC 1635
            W LVP   +M+++ NKWVF++KRRADG+VER KARLVA GF Q AGVD+ ETFSPV+K  
Sbjct: 557  WTLVPYHSKMNLLPNKWVFKVKRRADGSVERHKARLVANGFHQQAGVDYGETFSPVVKHS 616

Query: 1636 TIRLIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKALYG 1815
            TIRL+ +LAV+++W ++Q+DV NAFL+G LKE VYM QP GFV    P++VCKLQ+++YG
Sbjct: 617  TIRLVLSLAVSHRWPVRQLDVQNAFLHGFLKEDVYMRQPRGFVDQQFPSHVCKLQRSIYG 676

Query: 1816 LKQAPRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPSAID 1995
            LKQAPRAWF +  +FL  LGF+ S  D SLF  R  GV L +LIYVDDIL TGNSP  I 
Sbjct: 677  LKQAPRAWFQRFSDFLLELGFQESSCDYSLFVFRQQGVYLILLIYVDDILITGNSPHQIS 736

Query: 1996 SVIQLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASPTPL 2175
            S+I  LG  F++K LG ++YFLG+E   N + + L QSKY  DLLS+TN    K   TP+
Sbjct: 737  SLITRLGTLFSMKDLGPLHYFLGVEVKYNGTAMHLCQSKYALDLLSRTNFTEAKPISTPV 796

Query: 2176 STSQKLSLLDSKLFEHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQACK 2355
             +  KLS    + ++ P +YRS +G LQY+T+TRPD+S+AVN++ QF+H P   HW A K
Sbjct: 797  PSGHKLSAYVGESYDKPDVYRSVVGALQYITITRPDLSYAVNQVCQFMHSPKTTHWMAVK 856

Query: 2356 RLLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWSAKK 2535
            R+LRYLK T   G+ + P +   + AFSDAD+A   +   STGG CI+ GSNL+ WS+KK
Sbjct: 857  RILRYLKATHTHGLLYKPGSTQ-ISAFSDADYAGNPNSLHSTGGFCIYHGSNLVSWSSKK 915

Query: 2536 QSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNVVFH 2715
            Q  VS SSAE+EYR LA T  ++ W  SL  ++ +    P I WCDN+S++ALASN VFH
Sbjct: 916  QKTVSWSSAEAEYRQLAYTAAELSWFRSLFKDLHLHLDRPQI-WCDNISSIALASNPVFH 974

Query: 2716 ARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERFQLLCSKLPLCSSAV 2895
            ARTKH+E+D H+VREK++  ++ V YI +++Q ADLFTK LS+ RFQ L SKLP+    V
Sbjct: 975  ARTKHLEVDYHYVREKVVRGQLLVNYICSQDQLADLFTKGLSSSRFQSLVSKLPVVPQPV 1034

Query: 2896 KTTG 2907
               G
Sbjct: 1035 SLRG 1038



 Score =  135 bits (339), Expect = 3e-28
 Identities = 102/398 (25%), Positives = 172/398 (43%), Gaps = 33/398 (8%)
 Frame = +1

Query: 3133 ATDIFPANHSGGMESSSPISTAAFIPHFTPLTIRLDRSNYNFWKVQVLTTVRAHGFDGFL 3312
            A +    + S    +++P S   F    T + I+LDR+NY  W  Q+L  +++    G++
Sbjct: 2    AENTITPSSSTSSPTTNPTSNHPFHLFSTVVNIKLDRTNYPLWLAQILPILKSRDLMGYV 61

Query: 3313 LGNLPAPIQTIVCDGTSVINPEYVLWMRRDQLLMSWMLSSISESMLGHISRCSTSHEVWS 3492
             G L  P + +   GT+ ++P Y  W+++DQ+++SW+  S++ S+L  ++   T+   W 
Sbjct: 62   DGTLIPPSKYL--SGTTTLDPAYSAWVQQDQMILSWINGSLTASVLSVVASKRTARATWE 119

Query: 3493 TFVNLFATQSKARALQLRFMLQTLKKGDLSIDAYILKMKSIADDLNSIGHIIADDDLVLY 3672
                 +A+ S+ R L LR  L   KKGDLS+  Y+ +M +IAD+L   G  ++DD+LV  
Sbjct: 120  ALEQRYASTSQNRILFLRNELLQTKKGDLSVADYLDRMNAIADNLALAGQPVSDDELVQI 179

Query: 3673 ILGGLG--------------TDYESVVVNLTTRVDSISLQEAQFVLQTHEMRLQSQ---- 3798
            +L  LG                +E  V     R   I+    + +L T E R+       
Sbjct: 180  VLNNLGPAVDIKISELFVFTPAFEMTVSAAQARDSPITYPTLEALLLTTERRMAEHTAPL 239

Query: 3799 ISSTPINVHTSF----------VSPSADSTPSANVAHLPXXXXXXXXXXXXXXXXXXXXX 3948
            + S P+N   +               A S+   N  +                       
Sbjct: 240  VDSAPVNAFIASRGHGGGRFRGTGRGASSSYRGNSVN---QRGTGPRSNNNARNVPCSGE 296

Query: 3949 XXXXXXXXITCQLCGKPNHVASKCYKRFDISFKGSESSNSAPLSEQPQAYLTG-PSAPSM 4125
                    I CQ+CGK  H A  CY R + +F+             P   LT   S+P  
Sbjct: 297  RLGPNGERIVCQICGKLGHPALDCYHRMNTAFE----------CRIPATKLTAMASSPIP 346

Query: 4126 VDSN----WYFDSGATNHVTADLENLSIKSDYRGSEQL 4227
            ++ +    W  D+GA  H+T D++NL    +Y G++ +
Sbjct: 347  LNKHKSGTWLLDTGANAHITPDMQNLVNPKEYTGNDTI 384


>gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 539

 Score =  532 bits (1370), Expect = e-171
 Identities = 282/533 (52%), Positives = 362/533 (67%), Gaps = 4/533 (0%)
 Frame = +1

Query: 1288 MVTRSKNGIIKPKLFSALTSSSSLEHEPYTVNGALADTRWSDAMLDEYNALVTKNTWILV 1467
            M TRSK+GI KPK  S L + S    EP  V  AL D +W +AM  EY+AL+  NTW LV
Sbjct: 1    MQTRSKSGIHKPKYPSVLLAQS----EPKNVKQALKDPKWLEAMKQEYSALLKNNTWTLV 56

Query: 1468 PPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIKPCTIRL 1647
               P+ + I  KWVFRIK  +DG+V R+KARLVA+GF Q  G DF ETFSP+IKP TIRL
Sbjct: 57   QLPPDRNAIGCKWVFRIKENSDGSVNRYKARLVAKGFLQQPGFDFNETFSPIIKPVTIRL 116

Query: 1648 IFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKALYGLKQA 1827
            I TLA++N W I Q+DV+NAFLNG L ETVYM QP GF      T VCKL KALYGLKQA
Sbjct: 117  ILTLAISNHWDIHQLDVNNAFLNGSLNETVYMQQPPGF-EVPDSTLVCKLNKALYGLKQA 175

Query: 1828 PRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPSAIDSVIQ 2007
            PR WF +L+  L   GFKAS  D SLF       ++++L+YVDDI+ TGNS      +I 
Sbjct: 176  PRQWFERLQYTLLQFGFKASKCDPSLFTYHMQSNIVYLLVYVDDIIITGNSFQFTQQLID 235

Query: 2008 LLGQKFALKTLGEVNYFLGLEAARNSSG-LILTQSKYVHDLLSKTNMLHCKASPTPLSTS 2184
             L   F+LK LG+++YFLG+E     +G ++LTQSKY+ DLL +TNML   A  +P+ +S
Sbjct: 236  QLNSIFSLKQLGKLDYFLGIEVRHLQNGSVLLTQSKYIRDLLQRTNMLEANAISSPMVSS 295

Query: 2185 QKLSLLDSKLFEHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQACKRLL 2364
             KLS   S      + YRS +G LQY T+TRP++SFAVNK+ QF+  P  +HW A KR+L
Sbjct: 296  CKLSKHGSDTLADSTFYRSVVGALQYATITRPELSFAVNKVCQFMAHPLESHWNAVKRIL 355

Query: 2365 RYLKGTSHLGIAFTPV---TRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWSAKK 2535
            RYLKGT   G+   P        + A+ DADWA+  DDRRST G  IFLG NL+ W ++K
Sbjct: 356  RYLKGTMFYGLHLQPARVHQPFSLYAYCDADWAADPDDRRSTSGAAIFLGPNLISWWSRK 415

Query: 2536 QSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNVVFH 2715
            Q VV+RSS E+EYRSLA  T++V+W+ +LLHE+ V   +P+I +CDN S V+LA N V H
Sbjct: 416  QPVVARSSTEAEYRSLAQATSEVLWIQTLLHELRVPFSTPTI-YCDNQSTVSLAHNPVLH 474

Query: 2716 ARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERFQLLCSKL 2874
            +RTKH+EI++ FVREK+L+ ++ V++I A +Q AD  TKPLS+ RF +L  KL
Sbjct: 475  SRTKHMEINLFFVREKVLANQLTVQHIPASDQWADALTKPLSSTRFLILRDKL 527


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  545 bits (1404), Expect = e-171
 Identities = 267/523 (51%), Positives = 369/523 (70%), Gaps = 5/523 (0%)
 Frame = +1

Query: 1291 VTRSKNGIIKPKLFSALT---SSSSLEHEPYTVNGALADTRWSDAMLDEYNALVTKNTWI 1461
            VTR + GI KPK ++  T      +   EP  +  A+A++ W  AM  EY+A ++  TW 
Sbjct: 397  VTRLQKGISKPKRYTDGTVRYGCLTTTGEPENLREAMANSNWRLAMEQEYSAFMSNKTWH 456

Query: 1462 LVPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIKPCTI 1641
            LVPP+   ++I  KW+++IKR+ADG+++R+KARLVA+GF+Q  G+D+ +TFS V+K  TI
Sbjct: 457  LVPPTQGKNIIDCKWMYKIKRKADGSIDRYKARLVAKGFKQRYGIDYEDTFSLVVKAATI 516

Query: 1642 RLIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKALYGLK 1821
            RLI ++AV+  WS++Q+DV NAFL+G L+E VYM QP GF +   P Y+CKL KALYGLK
Sbjct: 517  RLILSIAVSKGWSLRQLDVQNAFLHGYLEEEVYMRQPPGFENKGQPNYLCKLDKALYGLK 576

Query: 1822 QAPRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPSAIDSV 2001
            QAPRAW+++L   L  LGF +S +DTSLFF    G  +F+L+YVDDI+   +S   + ++
Sbjct: 577  QAPRAWYSRLSTKLQELGFISSKADTSLFFYNKGGCTIFILVYVDDIIVASSSAEVVAAL 636

Query: 2002 IQLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASPTPLST 2181
            ++ L + FALK LG+++YFLG+E  + S GL+L+Q+ Y  D+L +  M  CK + TPLST
Sbjct: 637  LKDLEKDFALKDLGDLHYFLGIEVKKVSQGLVLSQAWYASDILKRAGMSICKPASTPLST 696

Query: 2182 SQKLSLLDSKLF--EHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQACK 2355
            ++KLS+ D         S YRS +G LQYLTLTR D+SF VNK+ QFLH PT  HW A K
Sbjct: 697  TEKLSIEDGDFLGQNDASHYRSIVGALQYLTLTRSDLSFLVNKVCQFLHSPTTVHWSAVK 756

Query: 2356 RLLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWSAKK 2535
            R+LRY+KGT   G+ F     ML+ AFSDADWA C DDRRSTGG  +FLG NL+ WSA+K
Sbjct: 757  RILRYIKGTVEFGLRFGKSDSMLISAFSDADWAGCSDDRRSTGGFAVFLGPNLISWSARK 816

Query: 2536 QSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNVVFH 2715
            Q+ VSRSS E+EY++LA+ TT+V W+  +L E+ ++  S + LWCDN+ A  L++N VFH
Sbjct: 817  QATVSRSSTEAEYKALANATTEVTWVRKILDELRIARPSVAQLWCDNLGATYLSANPVFH 876

Query: 2716 ARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSA 2844
            ARTKH+EID HFVRE++  K +D+++I+  +Q AD FTK L A
Sbjct: 877  ARTKHIEIDYHFVREQVAKKLLDIQFISTTDQLADGFTKSLPA 919



 Score = 81.6 bits (200), Expect = 6e-12
 Identities = 37/84 (44%), Positives = 51/84 (60%)
 Frame = +1

Query: 3976 TCQLCGKPNHVASKCYKRFDISFKGSESSNSAPLSEQPQAYLTGPSAPSMVDSNWYFDSG 4155
            TCQLCGK  H   KC+KRFD SF G + S +   S               VD+NWY DSG
Sbjct: 193  TCQLCGKIGHTVHKCWKRFDASFTGEDKSANVAASSYE------------VDTNWYIDSG 240

Query: 4156 ATNHVTADLENLSIKSDYRGSEQL 4227
            AT+H+T++L+ L++K  Y G++Q+
Sbjct: 241  ATDHITSELDKLTVKDKYAGNDQV 264



 Score = 74.7 bits (182), Expect = 8e-10
 Identities = 45/158 (28%), Positives = 77/158 (48%)
 Frame = +1

Query: 3211 HFTPLTIRLDRSNYNFWKVQVLTTVRAHGFDGFLLGNLPAPIQTIVCDGTSVINPEYVLW 3390
            H   +T +L ++N+  WK QVL T+R     GFL  ++  P             P  ++ 
Sbjct: 12   HGQAVTEKLTKANHVLWKAQVLATLRGAQMAGFLDRSIQPP-------------PAIIIL 58

Query: 3391 MRRDQLLMSWMLSSISESMLGHISRCSTSHEVWSTFVNLFATQSKARALQLRFMLQTLKK 3570
              +D+          +E +   ++  + + +VW     +F +QS+AR +     L +  K
Sbjct: 59   ATKDK-----DGKETTEKVANPVATFTNAADVWDAIEEIFNSQSRARIINTHMALSSTVK 113

Query: 3571 GDLSIDAYILKMKSIADDLNSIGHIIADDDLVLYILGG 3684
            G+ SI  Y+ KMK +AD++ S G  + DDDL+ +IL G
Sbjct: 114  GNRSIAEYVGKMKGLADEMASAGKALDDDDLISHILAG 151


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  559 bits (1441), Expect = e-171
 Identities = 279/544 (51%), Positives = 380/544 (69%), Gaps = 9/544 (1%)
 Frame = +1

Query: 1294 TRSKNGIIKPKLFSALTSSSSLEHEPYTVNG-------ALADTRWSDAMLDEYNALVTKN 1452
            TR ++G+ K K+++    +   +H  +T +G       AL D  W  AM  EY+ALV   
Sbjct: 915  TRLQSGVRKEKVYT--DGTIKYKHSWFTASGEPTNDLEALKDKNWKLAMDSEYDALVKNK 972

Query: 1453 TWILVPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIKP 1632
            TW LVPP    ++I  KWV++IKR+ADGT++R+KARLVA+GF+Q  G+D+ +TFSPV+K 
Sbjct: 973  TWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKA 1032

Query: 1633 CTIRLIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKALY 1812
             TIR+I +LAV+  WS++Q+DV NAFL+G L+E VYM QP GF   T P +VCKL KALY
Sbjct: 1033 ATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKALY 1092

Query: 1813 GLKQAPRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPSAI 1992
            GLKQAPRAWF++L + L  LGFK S  DTSLFF     + +FVL+YVDDI+   +S  A 
Sbjct: 1093 GLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKGDITMFVLVYVDDIIVASSSEKAT 1152

Query: 1993 DSVIQLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASPTP 2172
             +++Q L  +FALK LGE++YFLG+E ++  +G++L Q KY +DLL K  M+ CK + TP
Sbjct: 1153 AALLQDLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTP 1212

Query: 2173 LSTSQKLSLLDSKLF--EHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQ 2346
            LS S+KLSL +  L   E  S YRS +G LQYLTLTRPDI+F+VNK+ QFLH PT  HW 
Sbjct: 1213 LSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWI 1272

Query: 2347 ACKRLLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWS 2526
            A KR+LRYLK  + LG+        LV  FSDADWA CLDDRRSTGG  IFLGSNL+ W+
Sbjct: 1273 AVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDDRRSTGGFAIFLGSNLVSWN 1332

Query: 2527 AKKQSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNV 2706
            A+KQ+ VSRSS ESEY+++A+ T +++W+ +LL E+ + +   + +WCDN+ A  L++N 
Sbjct: 1333 ARKQATVSRSSTESEYKAIANATAEIMWVQTLLAELEIKSPKAAKIWCDNLGAKYLSANP 1392

Query: 2707 VFHARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERFQLLCSKLPLCS 2886
            VFHARTKH+E+D HFVRE++  K +++ +++  +Q AD FTKPLS    +   S L L  
Sbjct: 1393 VFHARTKHIEVDYHFVRERVSQKLLEIDFVSTNDQVADGFTKPLSVRLLENFKSNLNLVR 1452

Query: 2887 SAVK 2898
            S ++
Sbjct: 1453 SGLR 1456



 Score =  215 bits (547), Expect = 7e-53
 Identities = 99/184 (53%), Positives = 130/184 (70%), Gaps = 1/184 (0%)
 Frame = +1

Query: 517  FSTIQCVC*KTISSKIQCLQTDWGGEYRSFKPILANLGIQFRHPCPHTHQQHGKAERKHL 696
            F   Q +  +    KI  +QTDWGGEY+S     + +GI     CPHTHQQ+G AERKH 
Sbjct: 556  FQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHR 615

Query: 697  HIVEMGLSLLAQAGMPLKFWWDAFLASVFIINKLPSAVLANTSPHEKLFGLVPDYQFLKV 876
            HIVE+GLSLL+ A MPLKFW +AF  + ++IN++PS V+ N SP EKLF   PDY  L++
Sbjct: 616  HIVEIGLSLLSHASMPLKFWDEAFQVATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRI 675

Query: 877  FGCSCYPYLRPYNSHKFQFRSSRCLFLGYSPDHKGYKCLS-SDGKLYIACTVEFNEKEFP 1053
            FGC+C+P LRPYN+HK QFRS RC+FLG+S  HKG+KCL  S G++YI+  V F+E  FP
Sbjct: 676  FGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRDVVFDENIFP 735

Query: 1054 YSAM 1065
            ++ +
Sbjct: 736  FTEL 739



 Score =  153 bits (387), Expect = 7e-34
 Identities = 105/361 (29%), Positives = 166/361 (45%), Gaps = 10/361 (2%)
 Frame = +1

Query: 3175 SSSPISTAAFIPHFTPLTIRLDRSNYNFWKVQVLTTVRAHGFDGFLLGNLPAPIQTIVC- 3351
            SSS  +T  F  H  P++ +L ++N+  WKVQV   VR     G L G    P   I   
Sbjct: 4    SSSTAATNPFQGH--PISEKLGKANHALWKVQVSAAVRGARLQGHLTGATKRPPAEIAVT 61

Query: 3352 -DGTSVI--NPEYVLWMRRDQLLMSWMLSSISESMLGHISRCSTSHEVWSTFVNLFATQS 3522
             DG +    NP +  W   DQ ++ ++LSS++  +L  ++ C T+ EVWS    +++T +
Sbjct: 62   KDGATKKEPNPAHEDWEATDQQVLGYLLSSLTREVLMQVATCDTAAEVWSAIEQMYSTHT 121

Query: 3523 KARALQLRFMLQTLKKGDLSIDAYILKMKSIADDLNSI-GHIIADDDLVLYILGGLGTDY 3699
            +ARA+  RF L   KKG++S   Y  KMKS+ D++ +  G  I +++L+ YI+ GLG  Y
Sbjct: 122  RARAINTRFALTNTKKGNMSTPEYFAKMKSLGDEMATAGGRPIDEEELIQYIITGLGEGY 181

Query: 3700 ESVVVNLTTRVDSISLQEAQFVLQTHEMRLQSQISSTPINVHTS---FVSPSADSTPSAN 3870
              VV  +  RV+ IS+ +    +   E R      +  + V+ +     S       +  
Sbjct: 182  SEVVSAVCARVEPISVSDLYSQVLNFEARQAIYRGAQEVTVNVANRGGFSHGGRGNSNGG 241

Query: 3871 VAHLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITCQLCGKPNHVASKCYKRFDISFKG 4050
                                                CQ+C K  H A+ C+ R+D  +  
Sbjct: 242  QGGSRGGGGGGGHGRGNGGGGHGRGRTPGGVDKRPICQVCFKRGHTAADCWYRYDEDY-- 299

Query: 4051 SESSNSAPLSEQPQAYLTGPSAPSM--VDSNWYFDSGATNHVTADLENLSIKSDYRGSEQ 4224
                        P A     +A +   VD+NWY D+GAT+HVT +L+ L++K  Y G EQ
Sbjct: 300  -----------VPDAKHVAAAAVNSYGVDTNWYIDTGATDHVTGELDKLTMKEKYNGGEQ 348

Query: 4225 L 4227
            +
Sbjct: 349  I 349



 Score = 97.8 bits (242), Expect = 9e-17
 Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 1/137 (0%)
 Frame = +2

Query: 209 WHNKLGHPCNNVLSHVLQTLKIK-STPSSIPFCQACKLGKLHQMHFSSQPTKTTKPFQLL 385
           WH++LGHP    +  V+    +  S  SS   C AC+  K HQ+ F    + +  P +L+
Sbjct: 453 WHHRLGHPSITTVKQVVNKFSLPCSDLSSESVCNACQQAKSHQLPFPISSSVSKHPLELV 512

Query: 386 HSDLWGPSHVTSISGYRYYMHFVDDYTRYTWIFPLKSKYEALSIFQQFNVFVERQFHPKF 565
            SD+WGP+   S+   +YY+ F+DD++++TWI+ ++ K +    FQ+F V VERQF  K 
Sbjct: 513 FSDVWGPAP-ESVGRKKYYVSFIDDFSKFTWIYLIQHKSQVFDKFQEFQVMVERQFDRKI 571

Query: 566 NACKLIGEGNIVLLNLF 616
            A +    G    LN F
Sbjct: 572 LAMQTDWGGEYQSLNSF 588


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  555 bits (1430), Expect = e-171
 Identities = 275/525 (52%), Positives = 370/525 (70%), Gaps = 9/525 (1%)
 Frame = +1

Query: 1294 TRSKNGIIKPKLFS-------ALTSSSSLEHEPYTVNGALADTRWSDAMLDEYNALVTKN 1452
            TR + G+ KPK+++         TSS     EPY +N AL D  W DAM  EY+AL+   
Sbjct: 777  TRLQQGVRKPKVYTDGTIRYGCFTSSG----EPYDLNEALGDVNWKDAMDIEYSALMKNK 832

Query: 1453 TWILVPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIKP 1632
            TW LVPP    +VI  KWV++IKR+ADG+++R+KARLVA+G++Q  G+D+ +TFSPV+K 
Sbjct: 833  TWHLVPPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDTFSPVVKH 892

Query: 1633 CTIRLIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKALY 1812
             TIR+I ++AV+  WS+ Q+DV NAFL+G L+E VYM QP G+  +T   YVCKL KALY
Sbjct: 893  ATIRIILSIAVSRGWSLCQLDVQNAFLHGVLEEEVYMQQPPGYEDSTKLNYVCKLDKALY 952

Query: 1813 GLKQAPRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPSAI 1992
            GLKQAPRAW+++L   L SLGF+AS +DTSLFF     V +FVL+YVDDI+   ++  A 
Sbjct: 953  GLKQAPRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSVTIFVLVYVDDIIVASSTHKAT 1012

Query: 1993 DSVIQLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASPTP 2172
            ++++  L ++FALK LG++NYFLG+E  +   G+ILTQ KY  DLL K  M  CK   TP
Sbjct: 1013 EALLSDLNKEFALKDLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVGMSDCKPISTP 1072

Query: 2173 LSTSQKLSLLDSKLFEHPSL--YRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQ 2346
            LSTS+KLS+ +        +  YRS +G LQYLTLTRPDI+F+VNK+ QFLH PT  HW 
Sbjct: 1073 LSTSEKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQFLHAPTTLHWA 1132

Query: 2347 ACKRLLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWS 2526
            A KR+LRY+K  ++LG+        LV AFSDADWA  +DDR+STGG  +FLGSNL+ WS
Sbjct: 1133 AVKRILRYIKQCTNLGLHIHRSDSTLVSAFSDADWAGSVDDRKSTGGFAVFLGSNLVSWS 1192

Query: 2527 AKKQSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNV 2706
            A+KQ  VSRSS ESEY++LA+ T +++W+  LL EI + +   + LWCDN+ A  L++N 
Sbjct: 1193 ARKQPTVSRSSTESEYKALANATAELIWVQILLTEISIKSPRAAKLWCDNLGAKYLSANP 1252

Query: 2707 VFHARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLS 2841
            +FHARTKH+E+D HFVR+++  K +D+ Y+   +Q AD FTKPLS
Sbjct: 1253 IFHARTKHIEVDYHFVRDRVAKKLLDIEYVPTGDQVADGFTKPLS 1297



 Score =  208 bits (529), Expect = 8e-51
 Identities = 96/184 (52%), Positives = 127/184 (69%), Gaps = 1/184 (0%)
 Frame = +1

Query: 517  FSTIQCVC*KTISSKIQCLQTDWGGEYRSFKPILANLGIQFRHPCPHTHQQHGKAERKHL 696
            F   Q +  +    KI  +QTDWGGEY+        +GI     CPH HQQ+G AERKH 
Sbjct: 409  FHEFQSLVERLFDRKILAVQTDWGGEYQRLNTFFNKIGISHLVSCPHAHQQNGSAERKHR 468

Query: 697  HIVEMGLSLLAQAGMPLKFWWDAFLASVFIINKLPSAVLANTSPHEKLFGLVPDYQFLKV 876
            HIVE+GLSLLA A MPLKFW +AFLA+ ++IN+ P+ +L   +P E+LF   PDY  L++
Sbjct: 469  HIVEVGLSLLAHASMPLKFWDEAFLAAAYLINRTPTKILNLDTPFERLFHKQPDYSVLRI 528

Query: 877  FGCSCYPYLRPYNSHKFQFRSSRCLFLGYSPDHKGYKCLS-SDGKLYIACTVEFNEKEFP 1053
            FGC C+P LRPYNSHK QFRS +C+FLGYS  HKG+KCL  S G++Y++  V F+E  FP
Sbjct: 529  FGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVTFDENFFP 588

Query: 1054 YSAM 1065
            ++++
Sbjct: 589  FASL 592



 Score =  112 bits (279), Expect = 4e-21
 Identities = 62/177 (35%), Positives = 99/177 (55%), Gaps = 1/177 (0%)
 Frame = +1

Query: 3262 KVQVLTTVRAHGFDGFLLGNLPAPIQ-TIVCDGTSVINPEYVLWMRRDQLLMSWMLSSIS 3438
            K QV   +R    +G+L G    P + T+   G    NP +  W  +DQ ++S++LSSIS
Sbjct: 5    KAQVRAAMRGARLEGYLTGATKMPDEETVDNKGKKSPNPAFEEWEAKDQQILSYLLSSIS 64

Query: 3439 ESMLGHISRCSTSHEVWSTFVNLFATQSKARALQLRFMLQTLKKGDLSIDAYILKMKSIA 3618
              +   ++   T+ E W +   +FA+Q++ARA+ LR  L T KKG +++  Y  KMK   
Sbjct: 65   REVQIQVTSAKTAAEAWHSIEAMFASQTRARAVNLRLALSTTKKGSMTVAEYYTKMKGYG 124

Query: 3619 DDLNSIGHIIADDDLVLYILGGLGTDYESVVVNLTTRVDSISLQEAQFVLQTHEMRL 3789
            D++ + G  + D+++V YIL GL  ++  +V  L TRVD ISL++    L   E +L
Sbjct: 125  DEMAAAGRPLQDEEMVEYILTGLEEEFLPMVSALVTRVDPISLEDLYSQLLNFETKL 181



 Score = 66.2 bits (160), Expect = 4e-07
 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
 Frame = +1

Query: 3979 CQLCGKPNHVASKCYKRFDISFKGSESSNSAPLSEQPQAYLTGPSAPSM-VDSNWYFDSG 4155
            CQ+C K  H A++C+ RF+  F              P   L G +  S  VD+NWY D+G
Sbjct: 254  CQVCFKKGHTAARCWHRFEEDFV-------------PDEKLAGAATNSYHVDTNWYTDTG 300

Query: 4156 ATNHVTADLENLSIKSDYRGSEQL 4227
            AT+H+T +LE LSI+  Y G +Q+
Sbjct: 301  ATDHITGELEKLSIREKYAGGDQI 324


>ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513, partial [Sorghum bicolor]
          Length = 757

 Score =  538 bits (1385), Expect = e-171
 Identities = 274/527 (51%), Positives = 377/527 (71%), Gaps = 7/527 (1%)
 Frame = +1

Query: 1294 TRSKNGIIKPKLFSALTS-----SSSLEHEPYTVNGALADTRWSDAMLDEYNALVTKNTW 1458
            TR ++GIIKPK+++  T      +++ + EP TV  AL+D +W +AM  E++AL+   TW
Sbjct: 227  TRLQSGIIKPKIYTDGTVRWGMLANTADTEPTTVERALSDPKWVEAMDVEHDALLRNKTW 286

Query: 1459 ILVPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIKPCT 1638
             LVP     ++I  KW++++KRRADG+V+R+KARLVA+GF+Q  G+D+ +TFSPV+K  T
Sbjct: 287  KLVPRPRGENIIGCKWLYKVKRRADGSVDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 346

Query: 1639 IRLIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKALYGL 1818
            IRLI ++AV+N W ++Q+DV NAFL+G L E  YM QP G+VS  HP YVCKL+KALY L
Sbjct: 347  IRLILSIAVSNGWLLRQLDVQNAFLHGVLDEEDYMDQPLGYVSKLHPGYVCKLEKALYEL 406

Query: 1819 KQAPRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPSAIDS 1998
            KQAPRAW+ +L   L SL FK+S +DTSLF+    G  +FVL+YVDDI+   +S  A   
Sbjct: 407  KQAPRAWYARLSSKLISLRFKSSRADTSLFYYNKGGHTIFVLVYVDDIIVASSSLEATKV 466

Query: 1999 VIQLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASPTPLS 2178
            ++  L + FALK LG+++YFLG+E  R+S+GL+L+Q KY +D+L ++ M   K   TPL 
Sbjct: 467  LLSDLQKDFALKDLGDLHYFLGIEVKRDSNGLVLSQGKYANDILVRSGMSKSKPVHTPLP 526

Query: 2179 TSQKLSLLD-SKLFEHP-SLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQAC 2352
            ++QK+S+ D  KL E   + YRS +G LQYLTLTRPDISFAVNK+ QFLH PT  H  A 
Sbjct: 527  STQKISITDGDKLGEEDCTRYRSLVGALQYLTLTRPDISFAVNKVCQFLHAPTTTHLSAV 586

Query: 2353 KRLLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWSAK 2532
            KR+LRY++GTS  G+        +V AFS ADWA  +DDRRSTGG  +FLG NL+ W+A+
Sbjct: 587  KRILRYIQGTSKFGLRIRKSKCRIVSAFSYADWAGDVDDRRSTGGFAVFLGENLISWTAQ 646

Query: 2533 KQSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNVVF 2712
            KQ+ VSRSS E+EY++LA+ T +V+W+  LL E+ V     + LWCDN+ A  L++N VF
Sbjct: 647  KQATVSRSSTEAEYKALANATAEVMWVQKLLAELCVPHARVARLWCDNLGAKYLSANPVF 706

Query: 2713 HARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERF 2853
            HARTKH+EID HFVRE++  K +D+R+I++E+Q AD FTK L   +F
Sbjct: 707  HARTKHIEIDFHFVRERVAQKLLDIRFISSEDQLADGFTKSLPVTKF 753


>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
          Length = 1074

 Score =  547 bits (1410), Expect = e-170
 Identities = 270/548 (49%), Positives = 374/548 (68%), Gaps = 2/548 (0%)
 Frame = +1

Query: 1270 PTPCHSMVTRSKNGIIKPKLFSALTSSSSLEHEPYTVNGALADTRWSDAMLDEYNALVTK 1449
            P P H M+TRSK+GI K K     T  +SL  EP TV   L D  W  AM  EY AL+  
Sbjct: 517  PIPGHPMITRSKSGICKKK-----TYLTSLTIEPRTVKQTLQDPNWKLAMEQEYQALLKN 571

Query: 1450 NTWILVPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIK 1629
             TW LVPP     +I  KWVF++K + +G+++R+KARLVA+GF Q  G+DFFETFSPV+K
Sbjct: 572  QTWSLVPPPSNAKIIRCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVK 631

Query: 1630 PCTIRLIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKAL 1809
            PCTIRL+ ++AV++ W I+Q+DVHNAFLNGDL+E V+M QP GF  ++ PT+VC+LQKAL
Sbjct: 632  PCTIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQEQVFMMQPPGFEDSSCPTHVCRLQKAL 691

Query: 1810 YGLKQAPRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPSA 1989
            YGLKQ PRAWF KL  FL  +GF+ S ++ SLF+      ++ +LIYVDDIL TG++PS 
Sbjct: 692  YGLKQGPRAWFHKLSSFLLQIGFQCSRANASLFYFHSASDIIILLIYVDDILITGSNPSR 751

Query: 1990 IDSVIQLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASPT 2169
            +  +I  L   FAL+ LG+++YFLG++  R S  L L Q  Y+H LL + N+   K++ T
Sbjct: 752  VHQIISQLSSHFALRDLGDISYFLGIKVTRLSHALHLNQQHYIHQLLERANLHEAKSAST 811

Query: 2170 PLSTSQKLSLLDSKLFE--HPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHW 2343
            P +  + LS  D +       + YRS +G LQY+TLTRP+ISFAVN+  Q++ +PT +H 
Sbjct: 812  PGALGKLLSAADGEPLSVLDATHYRSLVGALQYITLTRPEISFAVNRACQYMARPTTSHL 871

Query: 2344 QACKRLLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMW 2523
            QA KR+LRYLKGT+  GI+      + ++ ++D DWASC DD+RST G C+F  +NL+ W
Sbjct: 872  QAAKRILRYLKGTATHGISIHASPSLSLQGYTDVDWASCPDDKRSTSGFCLFFCTNLISW 931

Query: 2524 SAKKQSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASN 2703
            S+ KQ VVSRSSAESEY +LA    +V W+  LL E+ +      ++WCDN+SA ALA+N
Sbjct: 932  SSTKQRVVSRSSAESEYWALALLVAEVSWVQFLLKELCIPQQDTPLIWCDNISATALAAN 991

Query: 2704 VVFHARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERFQLLCSKLPLC 2883
             VFHAR+KH+EID HFVR+K+L KE+ ++Y+ + +Q A++FTK + + +F    ++L + 
Sbjct: 992  SVFHARSKHIEIDFHFVRDKVLHKELLIQYVPSTDQLANVFTKHVPSCQFSAARTRLSVV 1051

Query: 2884 SSAVKTTG 2907
               V   G
Sbjct: 1052 PRPVSLRG 1059



 Score =  145 bits (366), Expect = 2e-31
 Identities = 83/274 (30%), Positives = 135/274 (49%), Gaps = 13/274 (4%)
 Frame = +1

Query: 3283 VRAHGFDGFLLGNLPAPIQTIVCDGTSVINPEYVLWMRRDQLLMSWMLSSISESMLGHIS 3462
            + A+GF+  + G  P P + I    T  +NP++++  R D++++SW+ SS++  ++  I 
Sbjct: 5    IYANGFEDHIEGLRPCPPKKI---STGEVNPDFLVLRRYDRMILSWIYSSLTPDVMRQIV 61

Query: 3463 RCSTSHEVWSTFVNLFATQSKARALQLRFMLQTLKKGDLSIDAYILKMKSIADDLNSIGH 3642
               TSHE W+     F+  +KAR +QLR   QT KKG L++  YI K+K I+D L +IG 
Sbjct: 62   GLQTSHEAWTALQQSFSASTKARTMQLRLAFQTTKKGSLTMMEYIQKLKHISDSLAAIGE 121

Query: 3643 IIADDDLVLYILGGLGTDYESVVVNLTTRVDSISLQEAQFVLQTHEMRLQSQISSTPINV 3822
             + + D +L +L GLG +Y  +V +LT R D I L     +L THE RL  Q ++T  ++
Sbjct: 122  PVPEKDQILQLLSGLGAEYNPIVASLTARDDDIQLHAVHSILLTHEQRLHLQTTATEEDL 181

Query: 3823 ------------HTSFVSPSADSTPSANVAHL-PXXXXXXXXXXXXXXXXXXXXXXXXXX 3963
                         +    PS    P + +  + P                          
Sbjct: 182  LIANFATHNRPRKSQSNKPSQGKPPQSFMPTIRPDTLPDSRQQYPQGYRPNRFNNNRSRT 241

Query: 3964 XXXITCQLCGKPNHVASKCYKRFDISFKGSESSN 4065
                 CQLCGK  H+   CY RFD++++G  +++
Sbjct: 242  NNRPQCQLCGKFGHMVFSCYHRFDVNYQGPRATH 275



 Score =  134 bits (338), Expect = 3e-28
 Identities = 67/138 (48%), Positives = 92/138 (66%), Gaps = 1/138 (0%)
 Frame = +1

Query: 655  HTHQQHGKAERKHLHIVEMGLSLLAQAGMPLKFWWDAFLASVFIINKLPSAVLANTSPHE 834
            H  +Q+G+ E K  H+VE GL+LL  A +P KFW  AF  +V +IN +PS +L  +SP  
Sbjct: 303  HVVEQNGRVECKMRHVVETGLTLLYTATLPSKFWPYAFTTTVTLINCMPSPLLNYSSPFS 362

Query: 835  KLFGLVPDYQFLKVFGCSCYPYLRPYNSHKFQFRSSRCLFLGYSPDHKGYKCLS-SDGKL 1011
             L+   PDY   KVFGC CYP+L+  NS+KFQ RS+ C+FLGY+P HKGY CL+ +  ++
Sbjct: 363  LLYKHPPDYFHFKVFGCLCYPHLKHLNSNKFQPRSTPCIFLGYAPSHKGYLCLNPTTNRV 422

Query: 1012 YIACTVEFNEKEFPYSAM 1065
            YI+  V F E  FP+ A+
Sbjct: 423  YISRHVVFAETTFPFQAL 440


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  561 bits (1447), Expect = e-170
 Identities = 289/562 (51%), Positives = 386/562 (68%), Gaps = 10/562 (1%)
 Frame = +1

Query: 1267 VPTPCHSMVTRSKNGIIKPKLFSA--------LTSSSSLEHEPYTVNGALADTRWSDAML 1422
            +P   H+M+TR+K GI KPK+F+A        + S ++L   P T   A   + W +AM 
Sbjct: 1107 IPVNTHTMITRAKAGIHKPKVFTATKHQLPSTVDSLTALPPTPSTFLQASKSSHWMEAMQ 1166

Query: 1423 DEYNALVTKNTWILVPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDF 1602
             E+ AL +  TW LVP     +++  KWVF++K + DGT+ER+KARLVA+GF Q  G+DF
Sbjct: 1167 FEFQALQSTGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFHQQEGLDF 1226

Query: 1603 FETFSPVIKPCTIRLIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPT 1782
             ETFSPV KP TIR++ ++AV+  W I Q+DV NAFL+G LKE VYM QP GFV  + P 
Sbjct: 1227 SETFSPVAKPTTIRILLSIAVSYYWFIHQLDVSNAFLHGHLKEDVYMVQPPGFVDPSKPH 1286

Query: 1783 YVCKLQKALYGLKQAPRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDI 1962
            +VCKL+K+LYGLKQAPRAW+      + SLGF +S SDTSLF KRD  +  F+L+YVDDI
Sbjct: 1287 HVCKLRKSLYGLKQAPRAWYEAFYTAILSLGFSSSHSDTSLFIKRDTSI-TFILVYVDDI 1345

Query: 1963 LFTGNSPSAIDSVIQLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTN 2142
            + TG+S +   S+I  L   F +K LG++NYFLG+E  ++  GL+L Q+KY  DLL KT+
Sbjct: 1346 IITGSSVTECQSIISQLQTMFPVKDLGDINYFLGIEVHKSDQGLLLHQAKYALDLLKKTD 1405

Query: 2143 MLHCKASPTPLSTSQKLSLLD--SKLFEHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQF 2316
            ML  K   TP+STS+    LD    L   P+ YRST+G LQYLT TRPD++FAVN++ Q+
Sbjct: 1406 MLGAKPCATPVSTSK----LDHSGTLLSDPTSYRSTVGALQYLTWTRPDLAFAVNQVCQY 1461

Query: 2317 LHQPTVNHWQACKRLLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCI 2496
            +H P   H QA KR+LRYLKGT  LG+ FT  ++ L  A+SDADWA C  DRRST G+C+
Sbjct: 1462 MHSPQTIHLQAVKRILRYLKGTVDLGLWFTKGSQCLT-AWSDADWAGCPVDRRSTSGYCV 1520

Query: 2497 FLGSNLLMWSAKKQSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDN 2676
            FLGSNL+ WSAKKQ+ V+RSS E+EYRSLA+T  ++ W+  +LH+I        +++CDN
Sbjct: 1521 FLGSNLISWSAKKQATVARSSTEAEYRSLANTAAEITWVCKILHDISFPLLKTPVIYCDN 1580

Query: 2677 MSAVALASNVVFHARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERFQ 2856
             S +ALA N VFHARTKHVEID H++REK+L   I V+++A+  Q AD+FTKPL+A+RF 
Sbjct: 1581 KSVIALAFNPVFHARTKHVEIDYHYIREKVLLGHIGVQHVASLLQIADIFTKPLAADRFA 1640

Query: 2857 LLCSKLPLCSSAVKTTGIT*SV 2922
             L SKL + S +    G   S+
Sbjct: 1641 ALTSKLSVRSPSFSLRGCVKSI 1662



 Score =  157 bits (397), Expect = 5e-35
 Identities = 94/242 (38%), Positives = 140/242 (57%), Gaps = 9/242 (3%)
 Frame = +1

Query: 367  QTISVTTFRPMGPISCHFY-FWL*ILHAFCG*LYSLYLDISLKIKI*GSFYFSTIQCVC* 543
            Q +    + P    SC  Y F+L I+  F    YS    +  K  +     FST++    
Sbjct: 790  QLLHTDVWGPSPTSSCTGYRFYLIIVDDFTK--YSWLYPLHFKSDV-----FSTLKTFIL 842

Query: 544  KT---ISSKIQCLQTDWGGEY--RSFKPILANLGIQFRHPCPHTHQQHGKAERKHLHIVE 708
            K    +  ++Q +++D GGE+  +S +      GI  +  C HT +Q+G AERKH H+VE
Sbjct: 843  KLQTLLDLQVQSIRSDSGGEFLNKSLQSFFNEQGITHQLSCLHTSEQNGCAERKHRHVVE 902

Query: 709  MGLSLLAQAGMPLKFWWDAFLASVFIINKLP--SAVLANTSPHEKLFGLVPDYQFLKVFG 882
            MG +LL+Q+ +P +FW +AF   V++IN+LP  S+V+   SP E LF   P Y  LK FG
Sbjct: 903  MGRTLLSQSDLPTQFWVEAFQTVVYLINRLPPQSSVI---SPWELLFHASPKYHTLKAFG 959

Query: 883  CSCYPYLRPYNSHKFQFRSSRCLFLGYSPDHKGYKCLSS-DGKLYIACTVEFNEKEFPYS 1059
            C+CYP+L+PY+  K  F+S +C+FLGYS +H GY+C      +LYI+  V F+E  FPY 
Sbjct: 960  CACYPWLQPYSRDKLDFKSKQCVFLGYSLNHSGYRCWDPISNRLYISRHVVFDESLFPYK 1019

Query: 1060 AM 1065
            ++
Sbjct: 1020 SL 1021



 Score =  110 bits (274), Expect = 2e-20
 Identities = 47/113 (41%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
 Frame = +2

Query: 197  DIATWHNKLGHPCNNVLSHVLQT--LKIKSTPSSIPFCQACKLGKLHQMHFSSQPTKTTK 370
            DI TWH +LGHP    L  V+    L +    +++  C AC+LGK +++ FS+ P  +++
Sbjct: 728  DIHTWHRRLGHPSGGTLHSVVHKNHLPVIGYVNNMSVCTACQLGKSYRLSFSTLPCTSSR 787

Query: 371  PFQLLHSDLWGPSHVTSISGYRYYMHFVDDYTRYTWIFPLKSKYEALSIFQQF 529
            P QLLH+D+WGPS  +S +GYR+Y+  VDD+T+Y+W++PL  K +  S  + F
Sbjct: 788  PLQLLHTDVWGPSPTSSCTGYRFYLIIVDDFTKYSWLYPLHFKSDVFSTLKTF 840



 Score =  108 bits (269), Expect = 6e-20
 Identities = 75/254 (29%), Positives = 125/254 (49%), Gaps = 4/254 (1%)
 Frame = +1

Query: 3130 PATDIFPANHSGGMESSSPISTAAFIPHFTP---LTIRLDRSNYNFWKVQVLTTVRAHGF 3300
            PA    PAN    + S+ PI T   I        +  +L+R NY  W+   +  ++    
Sbjct: 240  PANPNSPANLPPSVLSNPPIMTLGTISITNVAGMVPTKLNRQNYITWRSLFIPVLKRFKL 299

Query: 3301 DGFLLG-NLPAPIQTIVCDGTSVINPEYVLWMRRDQLLMSWMLSSISESMLGHISRCSTS 3477
             G + G +L  P       GT V N  +  W  RDQ+LM W+ S++S+ +L        S
Sbjct: 300  IGLVNGEDLCPPPFVRDPSGTCVPNASFETWCERDQILMIWINSTLSKDLLPLTIGMEDS 359

Query: 3478 HEVWSTFVNLFATQSKARALQLRFMLQTLKKGDLSIDAYILKMKSIADDLNSIGHIIADD 3657
              +W +    F+  S+     LR  +QT+ KGD S+  ++  +K I++ L + G  +++ 
Sbjct: 360  RSLWQSLERRFSGASRTHVHSLRSKIQTIHKGDSSMTDFLNSIKEISNKLAAAGEPLSES 419

Query: 3658 DLVLYILGGLGTDYESVVVNLTTRVDSISLQEAQFVLQTHEMRLQSQISSTPINVHTSFV 3837
            DLV YIL GL  +YES V ++ TR +S++  E   +L + E+ LQ + +    + +  F 
Sbjct: 420  DLVAYILSGLPDEYESFVDSIETRNESVTADELHGLLLSKEISLQKRKTRASSSSNAPFH 479

Query: 3838 SPSADSTPSANVAH 3879
            + +A S  S +V H
Sbjct: 480  AYAAQS--STHVGH 491


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1256

 Score =  550 bits (1417), Expect = e-169
 Identities = 271/527 (51%), Positives = 370/527 (70%), Gaps = 5/527 (0%)
 Frame = +1

Query: 1291 VTRSKNGIIKPKLFSALT---SSSSLEHEPYTVNGALADTRWSDAMLDEYNALVTKNTWI 1461
            VT  + GI K K+++  T      +   EP  ++ AL DT W  AM  ++ AL+   TW 
Sbjct: 719  VTHLQKGIRKEKIYTDRTVKYGCLTTTGEPRDLHDALHDTNWKHAMDAKFTALLHNKTWH 778

Query: 1462 LVPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIKPCTI 1641
            LVPP    ++I  KWV++IKR+ DG+++R+KARLVA+GF+Q  G+D+ +TFSPV+K  TI
Sbjct: 779  LVPPQKGRNIIDYKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATI 838

Query: 1642 RLIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKALYGLK 1821
            R+I ++AV+  W+++Q+DV NAFL+G L+E VYM QP G+    HP YVCKL KALYGLK
Sbjct: 839  RIILSIAVSRGWTLRQLDVQNAFLHGILEEEVYMKQPPGYEDKVHPDYVCKLDKALYGLK 898

Query: 1822 QAPRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPSAIDSV 2001
            QAPRAW+ KL + L  LGF+ S +DTSLFF    G+++FVL+YVDDI+   +   A+ ++
Sbjct: 899  QAPRAWYAKLSQKLQHLGFQGSKADTSLFFYNKGGLIIFVLVYVDDIIVASSRQDAVPAL 958

Query: 2002 IQLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASPTPLST 2181
            ++ L + FALK LG+++YFLG+E  + SSG++LTQ KYV DLL +  M  CK   TPLST
Sbjct: 959  LKDLQKDFALKDLGDLHYFLGIEVNKASSGIVLTQEKYVTDLLRRVGMTDCKPVSTPLST 1018

Query: 2182 SQKLSLLDSKLF--EHPSLYRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQACK 2355
            S+KL+L +  L      S YRS +G LQYLTLTRPDI F VNK+ QFLH PT+ HW A K
Sbjct: 1019 SEKLTLHEGDLLGPNDASNYRSVVGALQYLTLTRPDIYFPVNKVCQFLHAPTIVHWAAMK 1078

Query: 2356 RLLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWSAKK 2535
            R+LRYLK  + LG+  +    MLV  +SDADWA  +DDRRSTGG  +FLG NL+ W+AKK
Sbjct: 1079 RILRYLKQCTKLGLKISKSKSMLVSGYSDADWAGNIDDRRSTGGFAVFLGDNLVSWNAKK 1138

Query: 2536 QSVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNVVFH 2715
            Q+ V RSS ESEY++LA+ T +++W+ +LL E+ V +   + LWCDN+ A  L+SN VFH
Sbjct: 1139 QATVPRSSTESEYKALANATAEIMWIQTLLEELSVPSPPMARLWCDNLGAKYLSSNPVFH 1198

Query: 2716 ARTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSAERFQ 2856
            ARTKH+E+D HFVRE++  K ++V +I   +Q AD FTK LSA + +
Sbjct: 1199 ARTKHIEVDYHFVRERMQRKLLEVEFIPTGDQVADGFTKALSARQLE 1245



 Score =  216 bits (551), Expect = 2e-53
 Identities = 100/184 (54%), Positives = 130/184 (70%), Gaps = 1/184 (0%)
 Frame = +1

Query: 517  FSTIQCVC*KTISSKIQCLQTDWGGEYRSFKPILANLGIQFRHPCPHTHQQHGKAERKHL 696
            F   QC+  +  + KI  +QTDWGGEY+        +GI     CPHTHQQ+G AERKH 
Sbjct: 391  FQEFQCLVERMFNRKIISMQTDWGGEYQKLNTFFNKIGITHHVSCPHTHQQNGSAERKHR 450

Query: 697  HIVEMGLSLLAQAGMPLKFWWDAFLASVFIINKLPSAVLANTSPHEKLFGLVPDYQFLKV 876
            HIVE+GLSLLA A +PLKFW +A+ + V++IN++P+ VL  +SP E LF   PDYQ L+ 
Sbjct: 451  HIVEVGLSLLAHASLPLKFWDEAYQSGVYLINRMPTKVLGYSSPLECLFKQTPDYQALRT 510

Query: 877  FGCSCYPYLRPYNSHKFQFRSSRCLFLGYSPDHKGYKCL-SSDGKLYIACTVEFNEKEFP 1053
            FGC+C+P LRPYNSHK  FRS RC FLGYSP HKG++CL SS G++YI+  V F+E  FP
Sbjct: 511  FGCACWPDLRPYNSHKMHFRSKRCTFLGYSPLHKGFRCLDSSTGRIYISRDVVFDESVFP 570

Query: 1054 YSAM 1065
            ++ +
Sbjct: 571  FAEL 574



 Score =  169 bits (428), Expect = 8e-39
 Identities = 105/359 (29%), Positives = 171/359 (47%), Gaps = 6/359 (1%)
 Frame = +1

Query: 3169 MESSSPISTAAFIPHFTPLTIRLDRSNYNFWKVQVLTTVRAHGFDGFLLGNLPAPIQTIV 3348
            M SSS  S +  +   T +T +L + NY  WKVQVL  +R    D +L G    P  TI+
Sbjct: 1    MASSSQSSASGSLGGIT-VTEKLSKGNYLIWKVQVLAVIRGARLDSYLTGATKKPSATII 59

Query: 3349 CDGTS----VINPEYVLWMRRDQLLMSWMLSSISESMLGHISRCSTSHEVWSTFVNLFAT 3516
                     V NP    W+  DQ ++ ++L+++S  +L  ++ CS++  +WST   +F++
Sbjct: 60   IKKNEKEVEVSNPAVDEWIANDQQVLGYLLTTMSRDVLSQVATCSSAASLWSTIEGMFSS 119

Query: 3517 QSKARALQLRFMLQTLKKGDLSIDAYILKMKSIADDLNSIGHIIADDDLVLYILGGLGTD 3696
             ++AR++  +  L   KKGDL I  Y+ KM+ +AD+L + G  + ++DL+ YI+ GL  D
Sbjct: 120  ATRARSINTKIALTNTKKGDLGIAEYVSKMRVLADELATSGKPVDEEDLISYIIAGLDED 179

Query: 3697 YESVVVNLTTRVDSISLQEAQFVLQTHE--MRLQSQISSTPINVHTSFVSPSADSTPSAN 3870
            +E ++ +L ++ + +SL EA   L + E  M+++ + S+   N      +P         
Sbjct: 180  FEPIISSLVSKSEHVSLGEAYSQLLSFEQRMKMRQEHSANLANRGRGRGNPGRGRNNKQ- 238

Query: 3871 VAHLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITCQLCGKPNHVASKCYKRFDISFKG 4050
                                                CQLC K  H    C+ R+D  F  
Sbjct: 239  -PQQQQRGHGGNSRGRGRGNNSNQRQGGNGVDYRPKCQLCYKRGHTVIDCWYRYDEDFV- 296

Query: 4051 SESSNSAPLSEQPQAYLTGPSAPSMVDSNWYFDSGATNHVTADLENLSIKSDYRGSEQL 4227
                        P     G +A   VDSNWY D+G T+HVT +LE L+I+  Y+G +Q+
Sbjct: 297  ------------PDEKYAGTTASYGVDSNWYVDTGTTDHVTGELEKLTIRDKYKGQDQV 343


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  554 bits (1427), Expect = e-169
 Identities = 271/522 (51%), Positives = 381/522 (72%), Gaps = 5/522 (0%)
 Frame = +1

Query: 1294 TRSKNGIIKPKLFSALT---SSSSLEHEPYTVNGALADTRWSDAMLDEYNALVTKNTWIL 1464
            TR ++GI K K+++  T      S   EP     AL D  W DAM  EYNAL+  +TW L
Sbjct: 909  TRLRSGIRKEKVYTDGTVKYGCFSSTGEPQNDKEALGDKNWRDAMETEYNALIKNDTWHL 968

Query: 1465 VPPSPEMSVISNKWVFRIKRRADGTVERFKARLVARGFEQVAGVDFFETFSPVIKPCTIR 1644
            VP     ++I  KWV++IKR+ADGT++R+KARLVA+GF+Q  G+D+ +TFSPV+K  TIR
Sbjct: 969  VPYEKGQNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIR 1028

Query: 1645 LIFTLAVTNQWSIQQIDVHNAFLNGDLKETVYMAQPEGFVSTTHPTYVCKLQKALYGLKQ 1824
            +I ++AV+  WS++Q+DV NAFL+G L+E VYM QP GF S++ P YVCKL KALYGLKQ
Sbjct: 1029 IILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESSSKPDYVCKLDKALYGLKQ 1088

Query: 1825 APRAWFTKLKEFLSSLGFKASVSDTSLFFKRDNGVLLFVLIYVDDILFTGNSPSAIDSVI 2004
            APRAW+++L + L  LGF+AS +DTSLFF    G+L+FVL+YVDDI+   ++  A  +++
Sbjct: 1089 APRAWYSRLSKKLVELGFEASKADTSLFFLNKGGILMFVLVYVDDIIVASSTEKATTALL 1148

Query: 2005 QLLGQKFALKTLGEVNYFLGLEAARNSSGLILTQSKYVHDLLSKTNMLHCKASPTPLSTS 2184
            + L ++FALK LG+++YFLG+E  + S+G+ILTQ KY +DLL + NM +CK   TPLS S
Sbjct: 1149 KDLNKEFALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNCKPVSTPLSVS 1208

Query: 2185 QKLSLLD-SKLFEHPSL-YRSTIGTLQYLTLTRPDISFAVNKLSQFLHQPTVNHWQACKR 2358
            +KL+L + S L  + ++ YRS +G LQYLTLTRPDI+++VNK+ QFLH PT +HW A KR
Sbjct: 1209 EKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKR 1268

Query: 2359 LLRYLKGTSHLGIAFTPVTRMLVEAFSDADWASCLDDRRSTGGHCIFLGSNLLMWSAKKQ 2538
            +LRYL   + LG+        LV  +SDADWA  +DDR+STGG  +FLGSNL+ WSA+KQ
Sbjct: 1269 ILRYLNQCTSLGLHIHKSASTLVHGYSDADWAGSIDDRKSTGGFAVFLGSNLVSWSARKQ 1328

Query: 2539 SVVSRSSAESEYRSLADTTTDVVWLHSLLHEIGVST*SPSILWCDNMSAVALASNVVFHA 2718
              VSRSS E+EY+++A+TT +++W+ +LL E+G+ +   + +WCDN+ A  L++N VFHA
Sbjct: 1329 PTVSRSSTEAEYKAVANTTAELIWVQTLLKELGIESPKAAKIWCDNLGAKYLSANPVFHA 1388

Query: 2719 RTKHVEIDVHFVREKLLSKEIDVRYIAAEEQPADLFTKPLSA 2844
            RTKH+E+D HFVRE++  K +++ ++ + +Q AD FTK LSA
Sbjct: 1389 RTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKALSA 1430



 Score =  192 bits (487), Expect = 1e-45
 Identities = 91/185 (49%), Positives = 126/185 (68%), Gaps = 2/185 (1%)
 Frame = +1

Query: 517  FSTIQCVC*KTISSKIQCLQTDW-GGEYRSFKPILANLGIQFRHPCPHTHQQHGKAERKH 693
            F   Q +  +    KI  +QTDW GG Y+      A +G+          +Q+G AERKH
Sbjct: 561  FKEFQALVERMFDRKIIAMQTDWRGGRYQKLNSFFAQIGLIIMCHVLTLIRQNGSAERKH 620

Query: 694  LHIVEMGLSLLAQAGMPLKFWWDAFLASVFIINKLPSAVLANTSPHEKLFGLVPDYQFLK 873
             HIVE+GLSLL+ A MPLKFW +AF+A+ ++IN++PS  + N++P EKLF   PDY  L+
Sbjct: 621  RHIVEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLR 680

Query: 874  VFGCSCYPYLRPYNSHKFQFRSSRCLFLGYSPDHKGYKCLS-SDGKLYIACTVEFNEKEF 1050
            VFGC+C+P+LRPYN+HK QFRS +C+FLG+S  HKG+KCL  S G++YI+  V F+E  F
Sbjct: 681  VFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDENVF 740

Query: 1051 PYSAM 1065
            P+S +
Sbjct: 741  PFSTL 745



 Score =  124 bits (310), Expect = 8e-25
 Identities = 70/209 (33%), Positives = 117/209 (55%), Gaps = 4/209 (1%)
 Frame = +1

Query: 3175 SSSPISTAAFIPHFTPLTIRLDRSNYNFWKVQVLTTVRAHGFDGFLLGNLPAPIQ--TIV 3348
            SSS  + AA +     ++ +L ++N+  WK QV   VR     G+L G++ AP    ++ 
Sbjct: 5    SSSSGAAAANLLQGHSVSEKLGKANHALWKAQVSAAVRGARLLGYLNGDIKAPDAELSVT 64

Query: 3349 CDG--TSVINPEYVLWMRRDQLLMSWMLSSISESMLGHISRCSTSHEVWSTFVNLFATQS 3522
             DG  T+  NP +  W   DQL++ ++LSS+S  +L  ++ C T+ E W +   L++T +
Sbjct: 65   IDGKTTTKPNPAFEDWEANDQLVLGYLLSSLSRDVLIQVATCKTAAEAWRSIEALYSTGT 124

Query: 3523 KARALQLRFMLQTLKKGDLSIDAYILKMKSIADDLNSIGHIIADDDLVLYILGGLGTDYE 3702
            +ARA+  R  L   KKG + I  Y+ KM+++ D++ + GH + ++DLV YI+ GL  D+ 
Sbjct: 125  RARAVNTRLALTNTKKGTMKIAEYVAKMRALGDEMAAGGHPLDEEDLVQYIIAGLNEDFS 184

Query: 3703 SVVVNLTTRVDSISLQEAQFVLQTHEMRL 3789
             +V NL  + D I++ E    L   E  L
Sbjct: 185  PIVSNLCNKSDPITVGELYSQLVNFETLL 213



 Score = 95.5 bits (236), Expect = 4e-16
 Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
 Frame = +2

Query: 200 IATWHNKLGHPCNNVLSHVLQTLKIKSTPSSI--PFCQACKLGKLHQMHFSSQPTKTTKP 373
           ++ WH++LGHP   ++  V+    +  +  S+    C AC+  K HQ+ +    + +  P
Sbjct: 454 LSRWHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFP 513

Query: 374 FQLLHSDLWGPSHVTSISGYRYYMHFVDDYTRYTWIFPLKSKYEALSIFQQFNVFVERQF 553
            +L+ SD+WGP+   S+   +YY+ F+DD++++TWI+ LK K E    F++F   VER F
Sbjct: 514 LELVFSDVWGPAP-ESVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMF 572

Query: 554 HPKFNACKLIGE-GNIVLLNLFLPILVFNFVIHVLILI 664
             K  A +     G    LN F   +    + HVL LI
Sbjct: 573 DRKIIAMQTDWRGGRYQKLNSFFAQIGLIIMCHVLTLI 610



 Score = 66.2 bits (160), Expect = 4e-07
 Identities = 31/84 (36%), Positives = 45/84 (53%)
 Frame = +1

Query: 3976 TCQLCGKPNHVASKCYKRFDISFKGSESSNSAPLSEQPQAYLTGPSAPSMVDSNWYFDSG 4155
            TCQ+C K  H A+ C+ RFD  +   E   +A  +               +D+NWY D+G
Sbjct: 279  TCQVCFKRGHTAADCWYRFDEDYVADEKLVAAATNSYG------------IDTNWYIDTG 326

Query: 4156 ATNHVTADLENLSIKSDYRGSEQL 4227
            AT+H+T +LE L+ K  Y G EQ+
Sbjct: 327  ATDHITGELEKLTTKEKYNGGEQI 350