BLASTX nr result

ID: Rehmannia27_contig00035790 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00035790
         (384 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011087804.1| PREDICTED: pentatricopeptide repeat-containi...    54   4e-06

>ref|XP_011087804.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Sesamum indicum] gi|747081065|ref|XP_011087805.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Sesamum indicum]
           gi|747081067|ref|XP_011087806.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Sesamum indicum] gi|747081069|ref|XP_011087807.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Sesamum indicum]
           gi|747081071|ref|XP_011087808.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Sesamum indicum] gi|747081073|ref|XP_011087809.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Sesamum indicum]
           gi|747081075|ref|XP_011087810.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Sesamum indicum]
          Length = 552

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 29/52 (55%), Positives = 35/52 (67%)
 Frame = +1

Query: 1   TINCLVSCLRKAGMAREAYEIEQNASNGTRTCLSSSERTTQFSPNMNTPVAI 156
           TI+ L+SCLRKAGMAREA EI++ ASN       SSERT     NM+  VA+
Sbjct: 501 TISSLISCLRKAGMAREANEIQEKASNVVHLGSLSSERTGPIRTNMDITVAV 552


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