BLASTX nr result
ID: Rehmannia27_contig00035728
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00035728
(430 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011085494.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 72 4e-12
ref|XP_011085493.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 72 4e-12
ref|XP_011085492.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 72 4e-12
ref|XP_012830112.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 67 3e-10
ref|XP_015973676.1| PREDICTED: E3 ubiquitin-protein ligase COP1 ... 65 1e-09
ref|XP_006383838.1| hypothetical protein POPTR_0004s00430g [Popu... 64 2e-09
ref|XP_013634733.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 61 2e-09
gb|KOM46805.1| hypothetical protein LR48_Vigan07g050900 [Vigna a... 61 3e-09
dbj|BAE98955.1| photomorphogenesis repressor [Arabidopsis thaliana] 64 3e-09
ref|XP_011047014.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 64 4e-09
gb|AAA32772.1| regulatory protein [Arabidopsis thaliana] 64 4e-09
ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis t... 64 4e-09
ref|XP_006293448.1| hypothetical protein CARUB_v10022726mg [Caps... 64 4e-09
ref|XP_010509945.1| PREDICTED: E3 ubiquitin-protein ligase COP1 ... 63 5e-09
gb|AEA86331.1| E3 ubiquitin-protein ligase COP1 [Solanum nigrum] 61 6e-09
ref|XP_011096017.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 63 7e-09
ref|XP_010469527.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 63 7e-09
ref|XP_004491092.1| PREDICTED: E3 ubiquitin-protein ligase COP1 ... 62 1e-08
ref|XP_002879425.1| hypothetical protein ARALYDRAFT_902362 [Arab... 62 1e-08
emb|CAB89693.1| constitutively photomorphogenic 1 protein [Pisum... 62 1e-08
>ref|XP_011085494.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like isoform X3
[Sesamum indicum]
Length = 601
Score = 72.0 bits (175), Expect = 4e-12
Identities = 36/59 (61%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = -2
Query: 174 MGDISMGTVVPAVDNTA-PGGXXXXXXXXXXXXLCPICMQLIKDAFLTACGHSFCYMCI 1
MG+ SMG VVPA D G LCPICMQ+IKDAFLTACGHSFCYMCI
Sbjct: 1 MGESSMGAVVPAADKAELKGDDALAFAMAEKELLCPICMQIIKDAFLTACGHSFCYMCI 59
>ref|XP_011085493.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like isoform X2
[Sesamum indicum]
Length = 626
Score = 72.0 bits (175), Expect = 4e-12
Identities = 36/59 (61%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = -2
Query: 174 MGDISMGTVVPAVDNTA-PGGXXXXXXXXXXXXLCPICMQLIKDAFLTACGHSFCYMCI 1
MG+ SMG VVPA D G LCPICMQ+IKDAFLTACGHSFCYMCI
Sbjct: 1 MGESSMGAVVPAADKAELKGDDALAFAMAEKELLCPICMQIIKDAFLTACGHSFCYMCI 59
>ref|XP_011085492.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like isoform X1
[Sesamum indicum]
Length = 661
Score = 72.0 bits (175), Expect = 4e-12
Identities = 36/59 (61%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = -2
Query: 174 MGDISMGTVVPAVDNTA-PGGXXXXXXXXXXXXLCPICMQLIKDAFLTACGHSFCYMCI 1
MG+ SMG VVPA D G LCPICMQ+IKDAFLTACGHSFCYMCI
Sbjct: 1 MGESSMGAVVPAADKAELKGDDALAFAMAEKELLCPICMQIIKDAFLTACGHSFCYMCI 59
>ref|XP_012830112.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Erythranthe
guttata] gi|604344384|gb|EYU43138.1| hypothetical
protein MIMGU_mgv1a002549mg [Erythranthe guttata]
Length = 660
Score = 66.6 bits (161), Expect = 3e-10
Identities = 34/59 (57%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = -2
Query: 174 MGDISMGTVVPAVDNTAPGGXXXXXXXXXXXXL-CPICMQLIKDAFLTACGHSFCYMCI 1
MGD S+G VVPA + L CPICMQ+IKDAFLTACGHSFCYMCI
Sbjct: 1 MGDSSIGVVVPAAELQGDEALEEAEAEAEEKELMCPICMQMIKDAFLTACGHSFCYMCI 59
>ref|XP_015973676.1| PREDICTED: E3 ubiquitin-protein ligase COP1 [Arachis duranensis]
Length = 682
Score = 64.7 bits (156), Expect = 1e-09
Identities = 35/69 (50%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -2
Query: 204 PTAPI-PDHLRMGDISMGTVVPAVDNTAPGGXXXXXXXXXXXXLCPICMQLIKDAFLTAC 28
PTA P +G +S G + PA + P LCPICMQ+IKDAFLTAC
Sbjct: 21 PTAAADPSAATVGAVSGGEIFPASEAVMP--------ELDKDFLCPICMQIIKDAFLTAC 72
Query: 27 GHSFCYMCI 1
GHSFCYMCI
Sbjct: 73 GHSFCYMCI 81
>ref|XP_006383838.1| hypothetical protein POPTR_0004s00430g [Populus trichocarpa]
gi|550339983|gb|ERP61635.1| hypothetical protein
POPTR_0004s00430g [Populus trichocarpa]
Length = 406
Score = 64.3 bits (155), Expect = 2e-09
Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -2
Query: 171 GDISMGTVVPAVDNTAPGGXXXXXXXXXXXXL-CPICMQLIKDAFLTACGHSFCYMCI 1
G+ SMG +VP+V++ A + CPICMQ+IKDAFLT+CGHSFCY+CI
Sbjct: 20 GESSMGALVPSVNSEATTSKMQPPTEELDKDILCPICMQIIKDAFLTSCGHSFCYLCI 77
>ref|XP_013634733.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Brassica oleracea
var. oleracea]
Length = 136
Score = 61.2 bits (147), Expect = 2e-09
Identities = 28/45 (62%), Positives = 29/45 (64%)
Frame = -2
Query: 135 DNTAPGGXXXXXXXXXXXXLCPICMQLIKDAFLTACGHSFCYMCI 1
D GG LCPICMQ+IKDAFLTACGHSFCYMCI
Sbjct: 33 DEGGSGGLEIGAPDLDKDLLCPICMQVIKDAFLTACGHSFCYMCI 77
>gb|KOM46805.1| hypothetical protein LR48_Vigan07g050900 [Vigna angularis]
Length = 133
Score = 60.8 bits (146), Expect = 3e-09
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -2
Query: 75 CPICMQLIKDAFLTACGHSFCYMCI 1
CPICMQ+IKDAFLTACGHSFCYMCI
Sbjct: 50 CPICMQIIKDAFLTACGHSFCYMCI 74
>dbj|BAE98955.1| photomorphogenesis repressor [Arabidopsis thaliana]
Length = 391
Score = 63.5 bits (153), Expect = 3e-09
Identities = 36/76 (47%), Positives = 39/76 (51%), Gaps = 18/76 (23%)
Frame = -2
Query: 174 MGDISMGTVVPAV------------------DNTAPGGXXXXXXXXXXXXLCPICMQLIK 49
M +IS VVPAV D+ GG LCPICMQ+IK
Sbjct: 1 MEEISTDPVVPAVKPDPRTSSVGEGANRHENDDGGSGGSEIGAPDLDKDLLCPICMQIIK 60
Query: 48 DAFLTACGHSFCYMCI 1
DAFLTACGHSFCYMCI
Sbjct: 61 DAFLTACGHSFCYMCI 76
>ref|XP_011047014.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like isoform X1
[Populus euphratica]
Length = 602
Score = 63.5 bits (153), Expect = 4e-09
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = -2
Query: 171 GDISMGTVVPAVDNTAPGGXXXXXXXXXXXXL-CPICMQLIKDAFLTACGHSFCYMCI 1
G+ SMG +VP+V++ + CPICMQ+IKDAFLT+CGHSFCY+CI
Sbjct: 3 GESSMGALVPSVNSKGTNSKMQPPTEELDKDMLCPICMQIIKDAFLTSCGHSFCYLCI 60
>gb|AAA32772.1| regulatory protein [Arabidopsis thaliana]
Length = 675
Score = 63.5 bits (153), Expect = 4e-09
Identities = 36/76 (47%), Positives = 39/76 (51%), Gaps = 18/76 (23%)
Frame = -2
Query: 174 MGDISMGTVVPAV------------------DNTAPGGXXXXXXXXXXXXLCPICMQLIK 49
M +IS VVPAV D+ GG LCPICMQ+IK
Sbjct: 1 MEEISTDPVVPAVKPDPRTSSVGEGANRHENDDGGSGGSEIGAPDLDKDLLCPICMQIIK 60
Query: 48 DAFLTACGHSFCYMCI 1
DAFLTACGHSFCYMCI
Sbjct: 61 DAFLTACGHSFCYMCI 76
>ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
gi|20141387|sp|P43254.2|COP1_ARATH RecName: Full=E3
ubiquitin-protein ligase COP1; AltName:
Full=Constitutive photomorphogenesis protein 1
gi|2702280|gb|AAB91983.1| COP1 regulatory protein
[Arabidopsis thaliana] gi|95147316|gb|ABF57293.1|
At2g32950 [Arabidopsis thaliana]
gi|330253672|gb|AEC08766.1| E3 ubiquitin-protein ligase
COP1 [Arabidopsis thaliana]
Length = 675
Score = 63.5 bits (153), Expect = 4e-09
Identities = 36/76 (47%), Positives = 39/76 (51%), Gaps = 18/76 (23%)
Frame = -2
Query: 174 MGDISMGTVVPAV------------------DNTAPGGXXXXXXXXXXXXLCPICMQLIK 49
M +IS VVPAV D+ GG LCPICMQ+IK
Sbjct: 1 MEEISTDPVVPAVKPDPRTSSVGEGANRHENDDGGSGGSEIGAPDLDKDLLCPICMQIIK 60
Query: 48 DAFLTACGHSFCYMCI 1
DAFLTACGHSFCYMCI
Sbjct: 61 DAFLTACGHSFCYMCI 76
>ref|XP_006293448.1| hypothetical protein CARUB_v10022726mg [Capsella rubella]
gi|482562156|gb|EOA26346.1| hypothetical protein
CARUB_v10022726mg [Capsella rubella]
Length = 723
Score = 63.5 bits (153), Expect = 4e-09
Identities = 36/77 (46%), Positives = 39/77 (50%), Gaps = 19/77 (24%)
Frame = -2
Query: 174 MGDISMGTVVPAV-------------------DNTAPGGXXXXXXXXXXXXLCPICMQLI 52
M DIS +VPAV D+ GG LCPICMQ+I
Sbjct: 48 MEDISTDPLVPAVKPDPRTSSAGGEGANRLENDDGGSGGSEIGAPDLDKDLLCPICMQII 107
Query: 51 KDAFLTACGHSFCYMCI 1
KDAFLTACGHSFCYMCI
Sbjct: 108 KDAFLTACGHSFCYMCI 124
>ref|XP_010509945.1| PREDICTED: E3 ubiquitin-protein ligase COP1 isoform X1 [Camelina
sativa]
Length = 678
Score = 63.2 bits (152), Expect = 5e-09
Identities = 32/65 (49%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = -2
Query: 189 PDHLRMGDISMGTVVPAVDNT--APGGXXXXXXXXXXXXLCPICMQLIKDAFLTACGHSF 16
PD +R G ++N GG LCPICMQ+IKDAFLTACGHSF
Sbjct: 15 PDPMRTSSAGGGEGANRIENDDGGSGGSEIGAPDLDKDLLCPICMQVIKDAFLTACGHSF 74
Query: 15 CYMCI 1
CYMCI
Sbjct: 75 CYMCI 79
>gb|AEA86331.1| E3 ubiquitin-protein ligase COP1 [Solanum nigrum]
Length = 173
Score = 60.8 bits (146), Expect = 6e-09
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -2
Query: 75 CPICMQLIKDAFLTACGHSFCYMCI 1
CPICMQ+IKDAFLTACGHSFCYMCI
Sbjct: 13 CPICMQIIKDAFLTACGHSFCYMCI 37
>ref|XP_011096017.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Sesamum indicum]
Length = 678
Score = 62.8 bits (151), Expect = 7e-09
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 17/74 (22%)
Frame = -2
Query: 171 GDISMGTVVPAV-----DNTAPG------------GXXXXXXXXXXXXLCPICMQLIKDA 43
G IS GT+VP V D++A G LCPICMQ+IKDA
Sbjct: 4 GSISFGTMVPKVKSELVDSSAQAPPSPAITPSLSFGESEKEQKVDKDMLCPICMQIIKDA 63
Query: 42 FLTACGHSFCYMCI 1
FLTACGHSFCYMCI
Sbjct: 64 FLTACGHSFCYMCI 77
>ref|XP_010469527.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like isoform X1
[Camelina sativa] gi|727592956|ref|XP_010469528.1|
PREDICTED: E3 ubiquitin-protein ligase COP1-like isoform
X2 [Camelina sativa]
Length = 679
Score = 62.8 bits (151), Expect = 7e-09
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = -2
Query: 138 VDNTAPGGXXXXXXXXXXXXLCPICMQLIKDAFLTACGHSFCYMCI 1
+D+ GG LCPICMQ+IKDAFLTACGHSFCYMCI
Sbjct: 35 IDDGGSGGSEIGAPDLDKDLLCPICMQVIKDAFLTACGHSFCYMCI 80
>ref|XP_004491092.1| PREDICTED: E3 ubiquitin-protein ligase COP1 [Cicer arietinum]
Length = 672
Score = 62.4 bits (150), Expect = 1e-08
Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Frame = -2
Query: 174 MGDISMGTVVPAV-----------DNTAPGGXXXXXXXXXXXXL--CPICMQLIKDAFLT 34
M + S+G +VPAV DNT G CPICMQ+IKDAFLT
Sbjct: 1 MEEHSVGPLVPAVVKPEPSKPFSSDNTVAGEIFPVASMSEPDKDFLCPICMQIIKDAFLT 60
Query: 33 ACGHSFCYMCI 1
ACGHSFCYMCI
Sbjct: 61 ACGHSFCYMCI 71
>ref|XP_002879425.1| hypothetical protein ARALYDRAFT_902362 [Arabidopsis lyrata subsp.
lyrata] gi|297325264|gb|EFH55684.1| hypothetical protein
ARALYDRAFT_902362 [Arabidopsis lyrata subsp. lyrata]
Length = 675
Score = 62.4 bits (150), Expect = 1e-08
Identities = 35/76 (46%), Positives = 39/76 (51%), Gaps = 18/76 (23%)
Frame = -2
Query: 174 MGDISMGTVVPAV------------------DNTAPGGXXXXXXXXXXXXLCPICMQLIK 49
M +IS +VPAV D+ GG LCPICMQ+IK
Sbjct: 1 MEEISTDPLVPAVKPDPRTSSVGEGYNRNENDDGGDGGSEIGAPDLDKDLLCPICMQIIK 60
Query: 48 DAFLTACGHSFCYMCI 1
DAFLTACGHSFCYMCI
Sbjct: 61 DAFLTACGHSFCYMCI 76
>emb|CAB89693.1| constitutively photomorphogenic 1 protein [Pisum sativum]
Length = 675
Score = 62.4 bits (150), Expect = 1e-08
Identities = 36/71 (50%), Positives = 40/71 (56%), Gaps = 13/71 (18%)
Frame = -2
Query: 174 MGDISMGTVVPAV-----------DNTAPG--GXXXXXXXXXXXXLCPICMQLIKDAFLT 34
M + S+G +VPAV D TA G LCPICMQ+IKDAFLT
Sbjct: 1 MEEHSVGPLVPAVVKPEPSKNFSTDTTAAGDVSPVPTMSDLDKDFLCPICMQIIKDAFLT 60
Query: 33 ACGHSFCYMCI 1
ACGHSFCYMCI
Sbjct: 61 ACGHSFCYMCI 71