BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00035681
         (2039 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080768.1| PREDICTED: putative tRNA pseudouridine synth...   822   0.0  
ref|XP_012839130.1| PREDICTED: putative tRNA pseudouridine synth...   742   0.0  
emb|CDP04070.1| unnamed protein product [Coffea canephora]            651   0.0  
ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synth...   639   0.0  
ref|XP_010650837.1| PREDICTED: putative tRNA pseudouridine synth...   639   0.0  
ref|XP_010650836.1| PREDICTED: putative tRNA pseudouridine synth...   639   0.0  
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   640   0.0  
emb|CBI15850.3| unnamed protein product [Vitis vinifera]              635   0.0  
ref|XP_009592048.1| PREDICTED: putative tRNA pseudouridine synth...   635   0.0  
ref|XP_009789296.1| PREDICTED: putative tRNA pseudouridine synth...   630   0.0  
ref|XP_007017040.1| Pseudouridine synthase family protein [Theob...   628   0.0  
ref|XP_015088255.1| PREDICTED: putative tRNA pseudouridine synth...   625   0.0  
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth...   625   0.0  
ref|XP_015088254.1| PREDICTED: putative tRNA pseudouridine synth...   625   0.0  
ref|XP_012471711.1| PREDICTED: putative tRNA pseudouridine synth...   620   0.0  
ref|XP_009592044.1| PREDICTED: putative tRNA pseudouridine synth...   621   0.0  
gb|KHG01898.1| hypothetical protein F383_22524 [Gossypium arboreum]   618   0.0  
gb|KHG01897.1| hypothetical protein F383_22524 [Gossypium arboreum]   618   0.0  
ref|XP_012078395.1| PREDICTED: putative tRNA pseudouridine synth...   600   0.0  
ref|XP_015573835.1| PREDICTED: putative tRNA pseudouridine synth...   600   0.0  

>ref|XP_011080768.1| PREDICTED: putative tRNA pseudouridine synthase [Sesamum indicum]
          Length = 561

 Score =  822 bits (2122), Expect = 0.0
 Identities = 421/525 (80%), Positives = 449/525 (85%), Gaps = 4/525 (0%)
 Frame = -2

Query: 1969 SHLQISFTSMAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATTQ 1790
            S +  S T+M VSFLR+P+SPWW+TP TTN   +N  N KPLK  IL  STS ++AATTQ
Sbjct: 37   SSISRSCTTMVVSFLRLPISPWWVTPFTTNFSLQNPTNCKPLKACILCLSTS-FSAATTQ 95

Query: 1789 VSPSETALKWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRD 1610
            V+  E A KWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRD
Sbjct: 96   VTSLEAARKWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRD 155

Query: 1609 SNYGDLHKIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENI 1430
            SN+GDLHKIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFAL SY+NS+LPENI
Sbjct: 156  SNFGDLHKIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALVSYVNSHLPENI 215

Query: 1429 RVFSILPSQRSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGE 1250
            RVFSILPSQRSFDARRECSIRKYSYLLPAEIIGVKENFTA EVDNHLSDFNDILNTFEGE
Sbjct: 216  RVFSILPSQRSFDARRECSIRKYSYLLPAEIIGVKENFTADEVDNHLSDFNDILNTFEGE 275

Query: 1249 HPFHNYTVRAKYRKQ-PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGT 1073
            HPFHNYT+R+KYRKQ  R SSGNG V KR   S +Q  SE E SD ED HE+NESLA   
Sbjct: 276  HPFHNYTIRSKYRKQLQRGSSGNGCVLKRATPSNMQGGSELEESDEEDTHEANESLATEF 335

Query: 1072 GE---NXXXXXXXXXSAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQ 902
            GE   +          A +FD  + N K +N  +PV ARWLHEPD++D+LSASHFRKIFQ
Sbjct: 336  GETKTDSLLPSSGRTLAGLFDEDKANSKGQNLIVPVCARWLHEPDDRDRLSASHFRKIFQ 395

Query: 901  CCCGKLEQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIV 722
            C CGKLEQLSG+NYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDIL+LSLSKFSRIV
Sbjct: 396  CRCGKLEQLSGLNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILQLSLSKFSRIV 455

Query: 721  VPLAPSEVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLD 542
            +PLAPSEVLILRGNNFVIRKRPGNI RPEMLTLVESEEILKLVDDFY SVMLPQLS FLD
Sbjct: 456  LPLAPSEVLILRGNNFVIRKRPGNITRPEMLTLVESEEILKLVDDFYNSVMLPQLSRFLD 515

Query: 541  PLRPPWKDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKKTA 407
            P   PW DWVEILDANT IPE+QL EVR AWKLWKEEF SRKK A
Sbjct: 516  PSNSPWNDWVEILDANTGIPETQLIEVRNAWKLWKEEFQSRKKMA 560


>ref|XP_012839130.1| PREDICTED: putative tRNA pseudouridine synthase [Erythranthe guttata]
            gi|604347444|gb|EYU45681.1| hypothetical protein
            MIMGU_mgv1a004890mg [Erythranthe guttata]
          Length = 506

 Score =  742 bits (1915), Expect = 0.0
 Identities = 391/518 (75%), Positives = 428/518 (82%), Gaps = 7/518 (1%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPY--AAATTQVSPSETA 1769
            MAVSFLR   SP W+T LT +RRFK L ++KP K+ +L FSTS    AAA  +VSPSE A
Sbjct: 1    MAVSFLR---SPRWVT-LTPHRRFKYLTDFKPFKLSVLGFSTSSSSAAAAAVEVSPSENA 56

Query: 1768 LKWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLH 1589
             KWEPFRKKKVVMRVGYVGSDY+GLQIQRD+   STIEGELE AI+KAGGIRDSN+GDL+
Sbjct: 57   DKWEPFRKKKVVMRVGYVGSDYKGLQIQRDQPEFSTIEGELENAIYKAGGIRDSNFGDLN 116

Query: 1588 KIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILP 1409
            KIGWARSSRTDKGVHSLATMI+LKLEIPE AW+NDPNGFALA+Y+NSYLP NIRVFSILP
Sbjct: 117  KIGWARSSRTDKGVHSLATMITLKLEIPESAWNNDPNGFALATYVNSYLPRNIRVFSILP 176

Query: 1408 SQRSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYT 1229
            SQRSFDARRECSIRKYSYLLPAEIIGVKEN TA EVD+HLSDFNDILNTF+GEHPFHNYT
Sbjct: 177  SQRSFDARRECSIRKYSYLLPAEIIGVKENSTASEVDHHLSDFNDILNTFQGEHPFHNYT 236

Query: 1228 VRAKYRKQ-PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHES----NESLAIGTGEN 1064
            VR+KYRKQ P+  S   S SK   S  VQS   SEGSD E+  E      ESLA    E 
Sbjct: 237  VRSKYRKQFPKKGS---SASKMGKSLDVQSEFVSEGSDDEEEEEDTNVVTESLATEAEET 293

Query: 1063 XXXXXXXXXSAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKL 884
                             ED  K++N   PVLARWLHEPDEKD++SASHFRKIFQC CGKL
Sbjct: 294  KYDSLLPKD-------EEDQPKKQNLVSPVLARWLHEPDEKDRISASHFRKIFQCSCGKL 346

Query: 883  EQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPS 704
            EQLSG+N+VEISICGESFMLHQIRKMVGTAIA+KR+LLPRDILKLSLSKFSRIVVPLAPS
Sbjct: 347  EQLSGMNFVEISICGESFMLHQIRKMVGTAIAVKRDLLPRDILKLSLSKFSRIVVPLAPS 406

Query: 703  EVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPW 524
            EVLILRGNNFVIR RPGNI RPEMLTLVES+EILKLVDDFYYSVMLPQLS FLDP++ PW
Sbjct: 407  EVLILRGNNFVIRNRPGNIKRPEMLTLVESKEILKLVDDFYYSVMLPQLSVFLDPVKSPW 466

Query: 523  KDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKKT 410
             +WV++LDANT IPESQL EVR AWKLW+EEF   +KT
Sbjct: 467  NEWVDLLDANTCIPESQLEEVRSAWKLWREEFYGPRKT 504


>emb|CDP04070.1| unnamed protein product [Coffea canephora]
          Length = 538

 Score =  651 bits (1680), Expect = 0.0
 Identities = 349/539 (64%), Positives = 405/539 (75%), Gaps = 29/539 (5%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLT-TNRRFKNLNNYKPLKVIILRFSTSPYAA-ATTQVS----P 1781
            MAV  LR+P+SPW       T  +F N N  KPLK  +LRFSTS  A+ A  Q S    P
Sbjct: 1    MAVIPLRLPLSPWLAARAAPTTLQFFNPN--KPLKPFLLRFSTSAAASDAAAQDSVPLPP 58

Query: 1780 SETAL-----KWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGI 1616
            S +       KWEPFRKKKVVMRVGYVGSDYRGLQ+QRDEHAL TIEGELEKA+ KAGGI
Sbjct: 59   SSSPSPPPQNKWEPFRKKKVVMRVGYVGSDYRGLQMQRDEHALPTIEGELEKALHKAGGI 118

Query: 1615 RDSNYGDLHKIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPE 1436
            RDSN+GDL KI WARSSRTDKGVHSLATMIS K+EIPE AW +DPNG ALA+Y+NS+LPE
Sbjct: 119  RDSNFGDLQKIAWARSSRTDKGVHSLATMISFKMEIPENAWKDDPNGIALANYVNSFLPE 178

Query: 1435 NIRVFSILPSQRSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFE 1256
            NI VFSILPSQRSFDARREC +RKYSYLLPAEIIG++  FTA EVD HLS+FN  LN+FE
Sbjct: 179  NICVFSILPSQRSFDARRECDVRKYSYLLPAEIIGIRNEFTAAEVDLHLSEFNGFLNSFE 238

Query: 1255 GEHPFHNYTVRAKYRKQPRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIG 1076
            GEHPFHNYT+RAKYRKQ R  S N    K   SS  ++  E EGSD + + E  E   + 
Sbjct: 239  GEHPFHNYTIRAKYRKQLRTRSSN-ICDKGARSSDEEAACEHEGSDGDLVSEGKEVDTVD 297

Query: 1075 TGENXXXXXXXXXSAE----VFDAH------------ED--NLKEENRTIPVLARWLHEP 950
              +            E    ++D+             ED  +LK++N  +P+ ARWL+EP
Sbjct: 298  ESDGVEPIDGQKVVPELVKRIYDSSPSFCESPSSSYGEDGRSLKKQNSALPI-ARWLYEP 356

Query: 949  DEKDKLSASHFRKIFQCCCGKLEQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLL 770
            D +DKLSA+HFRKIFQC CGKLE++ G+NYVEI ICGESFMLHQIRKMVGTA+AIKR LL
Sbjct: 357  DARDKLSAAHFRKIFQCYCGKLERMCGMNYVEIWICGESFMLHQIRKMVGTAVAIKRKLL 416

Query: 769  PRDILKLSLSKFSRIVVPLAPSEVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVD 590
            P D+L+LSLSKFSRIV+PLAPSEVLILRGNNF +RKRPG   RPEMLTL+ESEEI+  VD
Sbjct: 417  PVDVLQLSLSKFSRIVLPLAPSEVLILRGNNFALRKRPGKETRPEMLTLLESEEIVTAVD 476

Query: 589  DFYYSVMLPQLSTFLDPLRPPWKDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 413
            +FY+SVMLPQ+STFL+P + PW DWV  LDANTSIPE QL EVR AWKLWKE+ +++ K
Sbjct: 477  EFYHSVMLPQVSTFLNPSKYPWNDWVNTLDANTSIPEFQLAEVRTAWKLWKEKPENKIK 535


>ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Solanum
            tuberosum]
          Length = 487

 Score =  639 bits (1647), Expect = 0.0
 Identities = 327/510 (64%), Positives = 390/510 (76%), Gaps = 2/510 (0%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATTQVSPSETALK 1763
            MA   +R+P  P       TN RF   +  K    I+  FSTSP          S  + K
Sbjct: 1    MAGLCVRLPQIP------VTNLRFSRSSTLK----IVRCFSTSPEDL-------SVQSNK 43

Query: 1762 WEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKI 1583
            W+PF KKKVVMRVGYVGSDYRGLQ+QRDEH LSTIEGELEKAIFKAGGIRDSN+G+L+KI
Sbjct: 44   WDPFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRDSNFGNLYKI 103

Query: 1582 GWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQ 1403
            GWARSSRTDKGVHSLATMISLK+EIP  AW++DPNG ALA+ +NS LPENIRVFSILPS+
Sbjct: 104  GWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGIALANCVNSSLPENIRVFSILPSK 163

Query: 1402 RSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVR 1223
            + FDARREC+ RKYSYL+PAEIIG+K + T+ E++ H+++FNDILN+FEGEHPFHNYT+R
Sbjct: 164  KRFDARRECNARKYSYLIPAEIIGIKNDSTSSEIEYHIANFNDILNSFEGEHPFHNYTIR 223

Query: 1222 AKYRKQPRVSS--GNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENXXXXX 1049
            +KYRKQ    +   N S+ K+   S  + +S SE SD E   +    + I   EN     
Sbjct: 224  SKYRKQSPARNLLKNESLLKKGRPSSEKEISGSEESDGEQNGKEKGVVTIVEAENQNPEG 283

Query: 1048 XXXXSAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSG 869
                          + K+ N  IP+ ARWLHEPD +DKLS++HFR+IF C CGKLE+L G
Sbjct: 284  NCNEKVS-------HSKDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLG 336

Query: 868  VNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLIL 689
            +NYVE+SICGESFMLHQIRKMVGTA+AIKRNLLP DIL++SL KFSRIV+PLAPSEVL+L
Sbjct: 337  MNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDILRMSLCKFSRIVLPLAPSEVLVL 396

Query: 688  RGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVE 509
            +GNNF +R  PGNIIRPEMLTL+ES++ILK VDDFYYS MLPQLS FLDP + PW +WVE
Sbjct: 397  KGNNFALRNHPGNIIRPEMLTLLESDDILKAVDDFYYSTMLPQLSRFLDPSKSPWSEWVE 456

Query: 508  ILDANTSIPESQLNEVRIAWKLWKEEFDSR 419
            ILDANTSIP+SQL EVR+AWKLWK ++DSR
Sbjct: 457  ILDANTSIPDSQLEEVRVAWKLWKAQYDSR 486


>ref|XP_010650837.1| PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Vitis
            vinifera]
          Length = 516

 Score =  639 bits (1649), Expect = 0.0
 Identities = 330/517 (63%), Positives = 400/517 (77%), Gaps = 7/517 (1%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATTQVSPSETALK 1763
            M VS LR P+ PW ++  T+N RF   +N + L    L  S+S  ++  T+ +P ++  K
Sbjct: 1    MVVSSLRFPLFPWIISNHTSNLRF---SNPRILPQWSLHCSSSS-SSTVTESNPDQSVQK 56

Query: 1762 WEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKI 1583
            WE FRKKKVVMRVGYVG++YRGLQ+QRDE +LSTIEGELE A+FKAGGIRDSNYG+LHKI
Sbjct: 57   WESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKI 116

Query: 1582 GWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQ 1403
            GW RSSRTDKGVHSLATMISLK+EIP  AW  DPNG ALA+Y+N +LP NI+VFSILPSQ
Sbjct: 117  GWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQ 176

Query: 1402 RSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVR 1223
            RSFDARREC +R+YSYLLPAEIIG+K N +A E+D+H+++FNDILNTFEGEHPF NYT+R
Sbjct: 177  RSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIR 236

Query: 1222 AKYRKQ--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLA--IGTGENXXX 1055
            +KYRKQ   + S GNG V +R  SS   S SE E SD E+    N  ++     GEN   
Sbjct: 237  SKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGINGVISSDYDEGENQNS 296

Query: 1054 XXXXXXSAEVFDAHEDN---LKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKL 884
                        +  +N   LKE++  + V ARWLH PDE+D++SASHFRKIF C CGKL
Sbjct: 297  SESTSFVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKL 356

Query: 883  EQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPS 704
            E+  G++YVE+SICGESFMLHQIRKMVGTAIA+KR LLPRDIL LSL+KFSRIV+PLAPS
Sbjct: 357  EKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPS 416

Query: 703  EVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPW 524
            EVLILRGN+F +RK+PGN+ RPEMLTL+ESEEILK VD+FY SV+LPQ+S FLDP + PW
Sbjct: 417  EVLILRGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPW 476

Query: 523  KDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 413
             DW+E L   +SIPE++L++VR AWKLWKE F SR K
Sbjct: 477  HDWLENLTL-SSIPEAELDDVRTAWKLWKENFRSRTK 512


>ref|XP_010650836.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Vitis
            vinifera]
          Length = 520

 Score =  639 bits (1649), Expect = 0.0
 Identities = 330/517 (63%), Positives = 400/517 (77%), Gaps = 7/517 (1%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATTQVSPSETALK 1763
            M VS LR P+ PW ++  T+N RF   +N + L    L  S+S  ++  T+ +P ++  K
Sbjct: 1    MVVSSLRFPLFPWIISNHTSNLRF---SNPRILPQWSLHCSSSS-SSTVTESNPDQSVQK 56

Query: 1762 WEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKI 1583
            WE FRKKKVVMRVGYVG++YRGLQ+QRDE +LSTIEGELE A+FKAGGIRDSNYG+LHKI
Sbjct: 57   WESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKI 116

Query: 1582 GWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQ 1403
            GW RSSRTDKGVHSLATMISLK+EIP  AW  DPNG ALA+Y+N +LP NI+VFSILPSQ
Sbjct: 117  GWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQ 176

Query: 1402 RSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVR 1223
            RSFDARREC +R+YSYLLPAEIIG+K N +A E+D+H+++FNDILNTFEGEHPF NYT+R
Sbjct: 177  RSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIR 236

Query: 1222 AKYRKQ--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLA--IGTGENXXX 1055
            +KYRKQ   + S GNG V +R  SS   S SE E SD E+    N  ++     GEN   
Sbjct: 237  SKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGINGVISSDYDEGENQNS 296

Query: 1054 XXXXXXSAEVFDAHEDN---LKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKL 884
                        +  +N   LKE++  + V ARWLH PDE+D++SASHFRKIF C CGKL
Sbjct: 297  SESTSFVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKL 356

Query: 883  EQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPS 704
            E+  G++YVE+SICGESFMLHQIRKMVGTAIA+KR LLPRDIL LSL+KFSRIV+PLAPS
Sbjct: 357  EKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPS 416

Query: 703  EVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPW 524
            EVLILRGN+F +RK+PGN+ RPEMLTL+ESEEILK VD+FY SV+LPQ+S FLDP + PW
Sbjct: 417  EVLILRGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPW 476

Query: 523  KDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 413
             DW+E L   +SIPE++L++VR AWKLWKE F SR K
Sbjct: 477  HDWLENLTL-SSIPEAELDDVRTAWKLWKENFRSRTK 512


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  640 bits (1650), Expect = 0.0
 Identities = 330/517 (63%), Positives = 400/517 (77%), Gaps = 7/517 (1%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATTQVSPSETALK 1763
            M VS LR P+ PW ++  T+N RF   +N + L    L  S+S  ++  T+ +P ++  K
Sbjct: 1    MVVSSLRFPLFPWIISNHTSNLRF---SNPRILPQWSLHCSSSS-SSTVTESNPDQSVQK 56

Query: 1762 WEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKI 1583
            WE FRKKKVVMRVGYVG++YRGLQ+QRDE +LSTIEGELE A+FKAGGIRDSNYG+LHKI
Sbjct: 57   WESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKI 116

Query: 1582 GWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQ 1403
            GW RSSRTDKGVHSLATMISLK+EIP  AW  DPNG ALA+Y+N +LP NI+VFSILPSQ
Sbjct: 117  GWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQ 176

Query: 1402 RSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVR 1223
            RSFDARREC +R+YSYLLPAEIIG+K N +A E+D+H+++FNDILNTFEGEHPF NYT+R
Sbjct: 177  RSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIR 236

Query: 1222 AKYRKQ--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLA--IGTGENXXX 1055
            +KYRKQ   + S GNG V +R  SS   S SE E SD E+    N  ++     GEN   
Sbjct: 237  SKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGVNGVISSDYDEGENQNS 296

Query: 1054 XXXXXXSAEVFDAHEDN---LKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKL 884
                        +  +N   LKE++  + V ARWLH PDE+D++SASHFRKIF C CGKL
Sbjct: 297  SESTSFVEHPVGSSNNNEKGLKEQSSKLVVRARWLHGPDERDRISASHFRKIFNCSCGKL 356

Query: 883  EQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPS 704
            E+  G++YVE+SICGESFMLHQIRKMVGTAIA+KR LLPRDIL LSL+KFSRIV+PLAPS
Sbjct: 357  EKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPS 416

Query: 703  EVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPW 524
            EVLILRGN+F +RK+PGN+ RPEMLTL+ESEEILK VD+FY SV+LPQ+S FLDP + PW
Sbjct: 417  EVLILRGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPW 476

Query: 523  KDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 413
             DW+E L   +SIPE++L++VR AWKLWKE F SR K
Sbjct: 477  HDWLENLTL-SSIPEAELDDVRTAWKLWKENFRSRTK 512


>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  635 bits (1637), Expect = 0.0
 Identities = 325/513 (63%), Positives = 398/513 (77%), Gaps = 3/513 (0%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATTQVSPSETALK 1763
            M VS LR P+ PW ++  T+N RF   +N + L    L  S+S  ++  T+ +P ++  K
Sbjct: 1    MVVSSLRFPLFPWIISNHTSNLRF---SNPRILPQWSLHCSSSS-SSTVTESNPDQSVQK 56

Query: 1762 WEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKI 1583
            WE FRKKKVVMRVGYVG++YRGLQ+QRDE +LSTIEGELE A+FKAGGIRDSNYG+LHKI
Sbjct: 57   WESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKI 116

Query: 1582 GWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQ 1403
            GW RSSRTDKGVHSLATMISLK+EIP  AW  DPNG ALA+Y+N +LP NI+VFSILPSQ
Sbjct: 117  GWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQ 176

Query: 1402 RSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVR 1223
            RSFDARREC +R+YSYLLPAEIIG+K N +A E+D+H+++FNDILNTFEGEHPF NYT+R
Sbjct: 177  RSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIR 236

Query: 1222 AKYRKQ--PRVSSGNGSVSKRVMSSIVQS-VSESEGSDAEDIHESNESLAIGTGENXXXX 1052
            +KYRKQ   + S GNG V +R  SS++ S   E E  ++ +     E   +G+  N    
Sbjct: 237  SKYRKQFPAKQSPGNGGVFRRAKSSVISSDYDEGENQNSSESTSFVEH-PVGSSNN---- 291

Query: 1051 XXXXXSAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLS 872
                        +E  LKE++  + V ARWLH PDE+D++SASHFRKIF C CGKLE+  
Sbjct: 292  ------------NEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFL 339

Query: 871  GVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLI 692
            G++YVE+SICGESFMLHQIRKMVGTAIA+KR LLPRDIL LSL+KFSRIV+PLAPSEVLI
Sbjct: 340  GLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLI 399

Query: 691  LRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWV 512
            LRGN+F +RK+PGN+ RPEMLTL+ESEEILK VD+FY SV+LPQ+S FLDP + PW DW+
Sbjct: 400  LRGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWL 459

Query: 511  EILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 413
            E L   +SIPE++L++VR AWKLWKE F SR K
Sbjct: 460  ENLTL-SSIPEAELDDVRTAWKLWKENFRSRTK 491


>ref|XP_009592048.1| PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Nicotiana
            tomentosiformis]
          Length = 521

 Score =  635 bits (1637), Expect = 0.0
 Identities = 328/523 (62%), Positives = 392/523 (74%), Gaps = 13/523 (2%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYA---------AATTQ 1790
            M    LR+P+ P       TN RF +    KPL  I+  FSTSP           A    
Sbjct: 1    MTALSLRLPLIP------LTNLRFSSYTR-KPL-TILCSFSTSPSVIPSEPCTTTAEDLS 52

Query: 1789 VSPSETALKWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRD 1610
              P   + KWEPF KKKVVMRVGYVGSDYRGLQ+QRDEH LSTIEGELEKAIFKAGGIRD
Sbjct: 53   PPPPARSNKWEPFIKKKVVMRVGYVGSDYRGLQMQRDEHELSTIEGELEKAIFKAGGIRD 112

Query: 1609 SNYGDLHKIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENI 1430
            SN+G+L+KIGWARSSRTDKGVHSL+TMISLK+EIPE AW +DPNG +LA+ +NSYLPENI
Sbjct: 113  SNFGNLYKIGWARSSRTDKGVHSLSTMISLKMEIPEDAWQDDPNGISLANCVNSYLPENI 172

Query: 1429 RVFSILPSQRSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGE 1250
            RVFSILPS++ FDARREC+ RKYSYLLPAEIIG+K   T+ E+D HLS+FNDILN+FEGE
Sbjct: 173  RVFSILPSKKRFDARRECNARKYSYLLPAEIIGIKNGSTSSEIDYHLSNFNDILNSFEGE 232

Query: 1249 HPFHNYTVRAKYRKQ--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIG 1076
            HPFHNYT+R+KYRK    R       + K+   S  + +S  E SD E+  + N  +   
Sbjct: 233  HPFHNYTIRSKYRKHSPARKLLQYDCLLKKGRPSTEEEISGCEESDGEENCKENGVVTTV 292

Query: 1075 TGENXXXXXXXXXSAEV--FDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQ 902
              EN           +   ++    + KE    +P+LARWLHE D +DKLS++HFR+IF 
Sbjct: 293  EDENQNPVCNLSTGNQAGNYNGKLSHSKELYPVLPILARWLHETDARDKLSSAHFRRIFH 352

Query: 901  CCCGKLEQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIV 722
            C CGKLE+L  +NYVE+SICGESFMLHQIRKMVGTA+AIKRNLLP D+L++SL KFSRIV
Sbjct: 353  CHCGKLEKLFSMNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPPDVLRMSLCKFSRIV 412

Query: 721  VPLAPSEVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLD 542
            +PLAPSEVL+L+GNNF +R +PGNI RPEMLTL+ESE+I+K VD+FYYS +L QLS FLD
Sbjct: 413  LPLAPSEVLVLKGNNFALRNQPGNITRPEMLTLLESEDIIKAVDEFYYSTVLTQLSKFLD 472

Query: 541  PLRPPWKDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 413
            P + PW DWVEILDANTSIPESQL EVRI+WKLWKE+++SR K
Sbjct: 473  PSKYPWSDWVEILDANTSIPESQLEEVRISWKLWKEQYESRTK 515


>ref|XP_009789296.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Nicotiana
            sylvestris] gi|698485021|ref|XP_009789297.1| PREDICTED:
            putative tRNA pseudouridine synthase isoform X1
            [Nicotiana sylvestris]
          Length = 531

 Score =  630 bits (1625), Expect = 0.0
 Identities = 329/533 (61%), Positives = 392/533 (73%), Gaps = 23/533 (4%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSP-------YAAATTQVS 1784
            M    LR+P+ P       TN RF +    KPL V+   FSTSP       Y      +S
Sbjct: 1    MTALSLRLPLIP------LTNLRFSSYTT-KPLTVLC-SFSTSPSVIPSEPYTTTAEDLS 52

Query: 1783 PSET------------ALKWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEK 1640
            P               + KWEPF KKKVVMRVGYVGSDYRGLQ+QRDEH LSTIEGELEK
Sbjct: 53   PPPPQSTSPSTIFPARSNKWEPFIKKKVVMRVGYVGSDYRGLQMQRDEHELSTIEGELEK 112

Query: 1639 AIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALAS 1460
            AIFKAGGIRDSN+G+L+KIGWARSSRTDKGVHSL+TMISLK+EIPE AW +DPNG +LA+
Sbjct: 113  AIFKAGGIRDSNFGNLYKIGWARSSRTDKGVHSLSTMISLKMEIPEDAWQDDPNGISLAN 172

Query: 1459 YINSYLPENIRVFSILPSQRSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDF 1280
             +NSYLPENIRVFSILPS++ FDARREC+ RKYSYLLPAEIIG+K   T+ E+D HLS F
Sbjct: 173  CVNSYLPENIRVFSILPSKKRFDARRECNARKYSYLLPAEIIGIKNGSTSSEIDYHLSSF 232

Query: 1279 NDILNTFEGEHPFHNYTVRAKYRKQ--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDI 1106
            NDILN+FEGEHPFHNYT+R+KYRK    R       + K+   S  + +S  E SD E+ 
Sbjct: 233  NDILNSFEGEHPFHNYTIRSKYRKHSPARKLLQYDCLLKKGRPSTEEEISWCEESDGEEN 292

Query: 1105 HESNESLAIGTGENXXXXXXXXXSAEVFDAHE--DNLKEENRTIPVLARWLHEPDEKDKL 932
             +    +     EN           +  + +E   + KE    +P+LARWLHE D +DKL
Sbjct: 293  CKEKGVVTTVEDENQNPVCNLSTRNQAGNYNEKLSHSKELYSALPILARWLHETDARDKL 352

Query: 931  SASHFRKIFQCCCGKLEQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILK 752
            S++HFR+IF C CGKLE+L  +NYVE+SICGESFMLHQIRKMVGTA+AIKRNLLP D+L+
Sbjct: 353  SSAHFRRIFHCHCGKLEKLLSMNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPPDVLR 412

Query: 751  LSLSKFSRIVVPLAPSEVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSV 572
            +SL KFSRIV+PLAPSEVL+L+GNNF +R +PGNI RPEMLTL+ESE+I+K VD+FYYS 
Sbjct: 413  MSLCKFSRIVLPLAPSEVLVLKGNNFALRNQPGNITRPEMLTLLESEDIIKAVDEFYYST 472

Query: 571  MLPQLSTFLDPLRPPWKDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 413
            ML QLS FLDP + PW DWVEILDANT IPESQL EVRI+WKLWKE+++SR K
Sbjct: 473  MLTQLSKFLDPAKYPWSDWVEILDANTRIPESQLEEVRISWKLWKEQYESRTK 525


>ref|XP_007017040.1| Pseudouridine synthase family protein [Theobroma cacao]
            gi|508787403|gb|EOY34659.1| Pseudouridine synthase family
            protein [Theobroma cacao]
          Length = 507

 Score =  628 bits (1620), Expect = 0.0
 Identities = 322/510 (63%), Positives = 388/510 (76%), Gaps = 6/510 (1%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKV----IILRFSTSPYAAATTQVSPSE 1775
            MA+S LR P++PW +             N  PLK+    I LRF  S   ++T Q  P  
Sbjct: 1    MAISCLRAPLAPWLM----------KTRNPPPLKLPCPRIQLRFLCS---SSTAQPLPPA 47

Query: 1774 TALKWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGD 1595
            +  KWEPFRKKKVVMRVGYVG++YRGLQ+QRDEH LSTIE ELE AIFKAGGIRDSNYGD
Sbjct: 48   SP-KWEPFRKKKVVMRVGYVGTNYRGLQVQRDEHQLSTIENELETAIFKAGGIRDSNYGD 106

Query: 1594 LHKIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSI 1415
            LHKI WARSSRTDKGVHSLATMI+LK+EIPE AW  DPNG ALA  +NSYLP++I+VFSI
Sbjct: 107  LHKIAWARSSRTDKGVHSLATMITLKMEIPEDAWKEDPNGIALAKCVNSYLPDSIKVFSI 166

Query: 1414 LPSQRSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHN 1235
            LPSQ+SFD RREC++RKYSYLLPAEIIG+K +F+  E+++H+SDFN ILN FEGEHPFHN
Sbjct: 167  LPSQKSFDPRRECNLRKYSYLLPAEIIGIKSHFSEAEINHHISDFNSILNCFEGEHPFHN 226

Query: 1234 YTVRAKYRKQ--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENX 1061
            YT RAKYR+Q  PR ++ NG V K   +    S SE E SD E+     E+  + + E  
Sbjct: 227  YTQRAKYRRQIPPRQTARNGRVPKGAEAHDESSTSELEESDVEEDPRIEETTTLNSEEK- 285

Query: 1060 XXXXXXXXSAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLE 881
                      +  D   ++L+ ++  + V ARWL+EPDE D+++ASHFRKIF C CG+LE
Sbjct: 286  -STSFDEPRVDCCDGQGNSLQYQSSNVVVRARWLYEPDETDRITASHFRKIFLCSCGRLE 344

Query: 880  QLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSE 701
               G +Y+EISI GESFMLHQIRKMVGTA+A+KRNL PRDIL LSL+KFSRIV+PLAPSE
Sbjct: 345  NSMGFDYIEISIWGESFMLHQIRKMVGTAVAVKRNLFPRDILTLSLAKFSRIVLPLAPSE 404

Query: 700  VLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWK 521
            VLILRGN F++RK P NI RPEMLT+VESEEILK VD FY SV+LPQ+S FLDP + PWK
Sbjct: 405  VLILRGNTFILRKMPSNITRPEMLTMVESEEILKEVDKFYRSVLLPQVSKFLDPSKSPWK 464

Query: 520  DWVEILDANTSIPESQLNEVRIAWKLWKEE 431
            +WVE LDANTS+P+++L+EVR AWKLWKE+
Sbjct: 465  EWVENLDANTSVPDAELDEVRTAWKLWKEK 494


>ref|XP_015088255.1| PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Solanum
            pennellii]
          Length = 496

 Score =  625 bits (1613), Expect = 0.0
 Identities = 321/512 (62%), Positives = 383/512 (74%), Gaps = 2/512 (0%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATTQVSPSETALK 1763
            MA   +R+P  P       TN RF      K    I+L  STS           S  + K
Sbjct: 1    MAGLCVRLPQIP------LTNLRFSRSRTLK----IVLCSSTS-----------SVESNK 39

Query: 1762 WEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKI 1583
            WEPF KKKVVMRVGYVGSDYRGLQ+QRDEH LSTIEGELEKAIFKAGGIR+SN+G+L+KI
Sbjct: 40   WEPFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRESNFGNLYKI 99

Query: 1582 GWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQ 1403
            GWARSSRTDKGVHSLATMISLK+EIP  AW++DPNG  LA+ +NS LPENIRVFSILPS+
Sbjct: 100  GWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGITLANCLNSSLPENIRVFSILPSK 159

Query: 1402 RSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVR 1223
            + FDARREC+ RKYSYL+PAEIIG+K +  + E++ H++ FNDILN+FEGEHPFHNYT+R
Sbjct: 160  KRFDARRECNARKYSYLIPAEIIGIKNDSASSEIEYHIAKFNDILNSFEGEHPFHNYTIR 219

Query: 1222 AKYRKQPRVSS--GNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENXXXXX 1049
            +KYRKQ    +   N S+ K+   S  + +S SE  D E   +    + I   EN     
Sbjct: 220  SKYRKQSPARNLLKNDSLLKKGRPSSEEEISGSEEIDGEQNRKEQRVVTIVEAENQNAEG 279

Query: 1048 XXXXSAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSG 869
                          + K+ N  IP+ ARWLHEPD +DKLS++HFR+IF C CGKLE+L G
Sbjct: 280  NCNLKVS-------HSKDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLG 332

Query: 868  VNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLIL 689
            +NYVE+SICGESFMLHQIRKMVGTA+AIKRNLLP D L++SL KFSRIV+PLAPSEVL+L
Sbjct: 333  MNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDSLRMSLCKFSRIVLPLAPSEVLVL 392

Query: 688  RGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVE 509
            +GNNF +R  PGNIIRPEMLTL+ES++ILK VDDFYYS +LPQLS FLDP + PW +WVE
Sbjct: 393  KGNNFALRNHPGNIIRPEMLTLLESDDILKAVDDFYYSTLLPQLSRFLDPSKSPWSEWVE 452

Query: 508  ILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 413
            ILDANTSIP+ QL EVR+AWKLWK ++DSR K
Sbjct: 453  ILDANTSIPDYQLEEVRVAWKLWKAQYDSRTK 484


>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Solanum
            lycopersicum]
          Length = 496

 Score =  625 bits (1613), Expect = 0.0
 Identities = 321/512 (62%), Positives = 384/512 (75%), Gaps = 2/512 (0%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATTQVSPSETALK 1763
            MA   +R+P  P       TN RF      K    I+L  STS           S  + K
Sbjct: 1    MAGLCVRLPQIP------LTNLRFLRSRTLK----IVLCSSTS-----------SVESNK 39

Query: 1762 WEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKI 1583
            WEPF KKKVVMRVGYVGSDYRGLQ+QRDEH LSTIEGELEKAIFKAGGIR+SN+G+L+KI
Sbjct: 40   WEPFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRESNFGNLYKI 99

Query: 1582 GWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQ 1403
            GWARSSRTDKGVHSLATMISLK+EIP  AW++DPNG  LA+ +NS LPENIRVFSILPS+
Sbjct: 100  GWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGITLANCVNSSLPENIRVFSILPSK 159

Query: 1402 RSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVR 1223
            + FDARREC+ RKYSYL+PAEIIG+K +  + E++ H+++FNDILN+FEGEHPFHNYT+R
Sbjct: 160  KRFDARRECNARKYSYLIPAEIIGIKNDSASSEIEYHIANFNDILNSFEGEHPFHNYTIR 219

Query: 1222 AKYRKQPRVSS--GNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENXXXXX 1049
            +KYRKQ    +   N S+ K+   S  + +S SE  D E   +    + I   EN     
Sbjct: 220  SKYRKQSPARNLLKNDSLLKKGRPSSEEEISGSEEIDGEQNRKEQGVVTIVEAENQNAEG 279

Query: 1048 XXXXSAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSG 869
                          + K+ N  IP+ ARWLHEPD +DKLS++HFR+IF C CGKLE+L G
Sbjct: 280  NCNLKVS-------HSKDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLG 332

Query: 868  VNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLIL 689
            +NYVE+SICGESFMLHQIRKMVGTA+AIKRNLLP D L++SL KFSRIV+PLAPSEVL+L
Sbjct: 333  MNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDTLRMSLCKFSRIVLPLAPSEVLVL 392

Query: 688  RGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVE 509
            +GNNF +R  PGNIIRPEMLTL+ES++ILK VDDFYYS +LPQLS FLDP + PW +WVE
Sbjct: 393  KGNNFALRNHPGNIIRPEMLTLLESDDILKAVDDFYYSTLLPQLSRFLDPSKSPWSEWVE 452

Query: 508  ILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 413
            ILDANTSIP+ QL EVR+AWKLWK ++DSR K
Sbjct: 453  ILDANTSIPDYQLEEVRVAWKLWKAQYDSRTK 484


>ref|XP_015088254.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Solanum
            pennellii]
          Length = 503

 Score =  625 bits (1613), Expect = 0.0
 Identities = 321/512 (62%), Positives = 383/512 (74%), Gaps = 2/512 (0%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATTQVSPSETALK 1763
            MA   +R+P  P       TN RF      K    I+L  STS           S  + K
Sbjct: 1    MAGLCVRLPQIP------LTNLRFSRSRTLK----IVLCSSTS-----------SVESNK 39

Query: 1762 WEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKI 1583
            WEPF KKKVVMRVGYVGSDYRGLQ+QRDEH LSTIEGELEKAIFKAGGIR+SN+G+L+KI
Sbjct: 40   WEPFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRESNFGNLYKI 99

Query: 1582 GWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQ 1403
            GWARSSRTDKGVHSLATMISLK+EIP  AW++DPNG  LA+ +NS LPENIRVFSILPS+
Sbjct: 100  GWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGITLANCLNSSLPENIRVFSILPSK 159

Query: 1402 RSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVR 1223
            + FDARREC+ RKYSYL+PAEIIG+K +  + E++ H++ FNDILN+FEGEHPFHNYT+R
Sbjct: 160  KRFDARRECNARKYSYLIPAEIIGIKNDSASSEIEYHIAKFNDILNSFEGEHPFHNYTIR 219

Query: 1222 AKYRKQPRVSS--GNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENXXXXX 1049
            +KYRKQ    +   N S+ K+   S  + +S SE  D E   +    + I   EN     
Sbjct: 220  SKYRKQSPARNLLKNDSLLKKGRPSSEEEISGSEEIDGEQNRKEQRVVTIVEAENQNAEG 279

Query: 1048 XXXXSAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSG 869
                          + K+ N  IP+ ARWLHEPD +DKLS++HFR+IF C CGKLE+L G
Sbjct: 280  NCNLKVS-------HSKDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLG 332

Query: 868  VNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLIL 689
            +NYVE+SICGESFMLHQIRKMVGTA+AIKRNLLP D L++SL KFSRIV+PLAPSEVL+L
Sbjct: 333  MNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDSLRMSLCKFSRIVLPLAPSEVLVL 392

Query: 688  RGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVE 509
            +GNNF +R  PGNIIRPEMLTL+ES++ILK VDDFYYS +LPQLS FLDP + PW +WVE
Sbjct: 393  KGNNFALRNHPGNIIRPEMLTLLESDDILKAVDDFYYSTLLPQLSRFLDPSKSPWSEWVE 452

Query: 508  ILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 413
            ILDANTSIP+ QL EVR+AWKLWK ++DSR K
Sbjct: 453  ILDANTSIPDYQLEEVRVAWKLWKAQYDSRTK 484


>ref|XP_012471711.1| PREDICTED: putative tRNA pseudouridine synthase [Gossypium raimondii]
            gi|763753101|gb|KJB20489.1| hypothetical protein
            B456_003G151400 [Gossypium raimondii]
          Length = 509

 Score =  620 bits (1599), Expect = 0.0
 Identities = 323/523 (61%), Positives = 391/523 (74%), Gaps = 11/523 (2%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATTQ--VSPSETA 1769
            MA+S LR+ ++PW +         K      PLKV   R   +  ++   +  +    +A
Sbjct: 1    MAISCLRLSLAPWLV---------KTPRPRPPLKVTPFRIICTAQSSVVDEKELPLPLSA 51

Query: 1768 LKWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLH 1589
             KWEPFRKKKVVMRVGYVG+DYRGLQ+QRDEH LSTIE ELE AIFKAGGIRDSNYGDLH
Sbjct: 52   CKWEPFRKKKVVMRVGYVGTDYRGLQLQRDEHELSTIENELETAIFKAGGIRDSNYGDLH 111

Query: 1588 KIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILP 1409
            KI WARSSRTDKGVHSLATMISLK+EIPE AW  DPNG ALA  +NSYLP+NIRVFSILP
Sbjct: 112  KIAWARSSRTDKGVHSLATMISLKMEIPEDAWKEDPNGIALAKCVNSYLPDNIRVFSILP 171

Query: 1408 SQRSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYT 1229
            SQ+SFD RREC++RKYSYLLPAEIIG+K +FT  E + H+SDFN ILN FEGEHPFHNYT
Sbjct: 172  SQKSFDPRRECNLRKYSYLLPAEIIGIKSHFTEAETNYHISDFNSILNCFEGEHPFHNYT 231

Query: 1228 VRAKYRKQ--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAED---IHE----SNESLAIG 1076
             RAKYR++  PR ++ NG    R  S    S SE E SD E+   I E    +NE ++ G
Sbjct: 232  QRAKYRRRVPPRQTARNGR-PPRAKSHNGSSTSEMEESDVEEDTRIDETSTVNNEEMSCG 290

Query: 1075 TGENXXXXXXXXXSAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCC 896
             GE            +  ++  +  K+++  + V+ARWLHEPDE D+++ SHFRKIF C 
Sbjct: 291  FGE---------PVVDSCNSQGNGSKDQSPKV-VIARWLHEPDETDRITGSHFRKIFHCS 340

Query: 895  CGKLEQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVP 716
            CGKL+   G +YVEISI GESFMLHQIRKMVGTA+A+KR LLPRDIL LSL+KFSR+V+P
Sbjct: 341  CGKLQNSMGFDYVEISIWGESFMLHQIRKMVGTAVAVKRKLLPRDILTLSLAKFSRVVLP 400

Query: 715  LAPSEVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPL 536
            LAPSEVLILRGN F++RK PGN+ RPEMLT+VES+EILK VD+FY SVMLPQ+S FLDP 
Sbjct: 401  LAPSEVLILRGNTFILRKAPGNVTRPEMLTMVESKEILKAVDEFYKSVMLPQVSKFLDPS 460

Query: 535  RPPWKDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKKTA 407
            + PW++WVE LD NT IP+++L+EVR AWKLWKE+   R+ ++
Sbjct: 461  KSPWEEWVENLDFNTGIPDAELDEVRNAWKLWKEKLPIRRTSS 503


>ref|XP_009592044.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Nicotiana
            tomentosiformis] gi|697166428|ref|XP_009592045.1|
            PREDICTED: putative tRNA pseudouridine synthase isoform
            X1 [Nicotiana tomentosiformis]
            gi|697166430|ref|XP_009592046.1| PREDICTED: putative tRNA
            pseudouridine synthase isoform X1 [Nicotiana
            tomentosiformis] gi|697166432|ref|XP_009592047.1|
            PREDICTED: putative tRNA pseudouridine synthase isoform
            X1 [Nicotiana tomentosiformis]
          Length = 541

 Score =  621 bits (1601), Expect = 0.0
 Identities = 327/543 (60%), Positives = 391/543 (72%), Gaps = 33/543 (6%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYA---------AATTQ 1790
            M    LR+P+ P       TN RF +    KPL  I+  FSTSP           A    
Sbjct: 1    MTALSLRLPLIP------LTNLRFSSYTR-KPL-TILCSFSTSPSVIPSEPCTTTAEDLS 52

Query: 1789 VSPSETALKWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALS------------------ 1664
              P   + KWEPF KKKVVMRVGYVGSDYRGLQ+QRDEH LS                  
Sbjct: 53   PPPPARSNKWEPFIKKKVVMRVGYVGSDYRGLQMQRDEHELSKNHGWLCLANSLLQGDNI 112

Query: 1663 --TIEGELEKAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKLEIPEFAWD 1490
               IEGELEKAIFKAGGIRDSN+G+L+KIGWARSSRTDKGVHSL+TMISLK+EIPE AW 
Sbjct: 113  CVAIEGELEKAIFKAGGIRDSNFGNLYKIGWARSSRTDKGVHSLSTMISLKMEIPEDAWQ 172

Query: 1489 NDPNGFALASYINSYLPENIRVFSILPSQRSFDARRECSIRKYSYLLPAEIIGVKENFTA 1310
            +DPNG +LA+ +NSYLPENIRVFSILPS++ FDARREC+ RKYSYLLPAEIIG+K   T+
Sbjct: 173  DDPNGISLANCVNSYLPENIRVFSILPSKKRFDARRECNARKYSYLLPAEIIGIKNGSTS 232

Query: 1309 GEVDNHLSDFNDILNTFEGEHPFHNYTVRAKYRKQP--RVSSGNGSVSKRVMSSIVQSVS 1136
             E+D HLS+FNDILN+FEGEHPFHNYT+R+KYRK    R       + K+   S  + +S
Sbjct: 233  SEIDYHLSNFNDILNSFEGEHPFHNYTIRSKYRKHSPARKLLQYDCLLKKGRPSTEEEIS 292

Query: 1135 ESEGSDAEDIHESNESLAIGTGENXXXXXXXXXSAEV--FDAHEDNLKEENRTIPVLARW 962
              E SD E+  + N  +     EN           +   ++    + KE    +P+LARW
Sbjct: 293  GCEESDGEENCKENGVVTTVEDENQNPVCNLSTGNQAGNYNGKLSHSKELYPVLPILARW 352

Query: 961  LHEPDEKDKLSASHFRKIFQCCCGKLEQLSGVNYVEISICGESFMLHQIRKMVGTAIAIK 782
            LHE D +DKLS++HFR+IF C CGKLE+L  +NYVE+SICGESFMLHQIRKMVGTA+AIK
Sbjct: 353  LHETDARDKLSSAHFRRIFHCHCGKLEKLFSMNYVEVSICGESFMLHQIRKMVGTAVAIK 412

Query: 781  RNLLPRDILKLSLSKFSRIVVPLAPSEVLILRGNNFVIRKRPGNIIRPEMLTLVESEEIL 602
            RNLLP D+L++SL KFSRIV+PLAPSEVL+L+GNNF +R +PGNI RPEMLTL+ESE+I+
Sbjct: 413  RNLLPPDVLRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNQPGNITRPEMLTLLESEDII 472

Query: 601  KLVDDFYYSVMLPQLSTFLDPLRPPWKDWVEILDANTSIPESQLNEVRIAWKLWKEEFDS 422
            K VD+FYYS +L QLS FLDP + PW DWVEILDANTSIPESQL EVRI+WKLWKE+++S
Sbjct: 473  KAVDEFYYSTVLTQLSKFLDPSKYPWSDWVEILDANTSIPESQLEEVRISWKLWKEQYES 532

Query: 421  RKK 413
            R K
Sbjct: 533  RTK 535


>gb|KHG01898.1| hypothetical protein F383_22524 [Gossypium arboreum]
          Length = 509

 Score =  618 bits (1593), Expect = 0.0
 Identities = 321/521 (61%), Positives = 392/521 (75%), Gaps = 9/521 (1%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATTQVSPSETALK 1763
            MA+S LR+ ++PW    L    R +     KP ++I    S+        ++    +A K
Sbjct: 1    MAISCLRLSLAPW----LVKTPRPRPTLKVKPFRIICTAQSS---VVDEKELPLPLSACK 53

Query: 1762 WEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKI 1583
            WEPFRKKKVVMRVGYVG+DYRGLQ+QRDEH LSTIE ELE AIFKAGGIRDSNYGDLHKI
Sbjct: 54   WEPFRKKKVVMRVGYVGTDYRGLQLQRDEHELSTIENELETAIFKAGGIRDSNYGDLHKI 113

Query: 1582 GWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQ 1403
             WARSSRTDKGVHSLATMISLK+EIPE AW  DP+G ALA+ +NSYLP+NIRVFSILPSQ
Sbjct: 114  AWARSSRTDKGVHSLATMISLKMEIPEDAWKEDPSGVALANCVNSYLPDNIRVFSILPSQ 173

Query: 1402 RSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVR 1223
            +SFD RREC++RKYSYLLPAEIIG+K +FT  E + H+SDFN ILN FEGEHPFHNYT R
Sbjct: 174  KSFDPRRECNLRKYSYLLPAEIIGIKSHFTEAETNCHISDFNSILNCFEGEHPFHNYTQR 233

Query: 1222 AKYRKQ--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAED---IHE----SNESLAIGTG 1070
            AKYR +  PR ++ NG    R  S    S SE E SD E+   I E    +NE ++ G G
Sbjct: 234  AKYRSRVPPRQTARNGR-PPRAKSHNGSSTSEIEESDVEEDTRIDETSSVNNEEMSCGFG 292

Query: 1069 ENXXXXXXXXXSAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCG 890
            E            +  ++  +  K+++  + V+ARWLHEPDE D++++SHFRKIF+C CG
Sbjct: 293  E---------PVVDSCNSQGNGSKDQSPKV-VIARWLHEPDETDRITSSHFRKIFRCSCG 342

Query: 889  KLEQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLA 710
            KL+   G +YVEISI GESFMLHQIRKMVGTA+A+KR LLPRDIL LSL+KFSR+V+PLA
Sbjct: 343  KLQNSMGFDYVEISIWGESFMLHQIRKMVGTAVAVKRKLLPRDILTLSLAKFSRVVLPLA 402

Query: 709  PSEVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRP 530
            PSEVLILRGN F++RK PGN+ RPEML +VESEEILK +D+FY SVMLPQ+S FLDP + 
Sbjct: 403  PSEVLILRGNTFILRKAPGNVTRPEMLVMVESEEILKAIDEFYKSVMLPQVSKFLDPSKS 462

Query: 529  PWKDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKKTA 407
            PW++WVE LD NT IP+++L+EVR AWKLWKE+   R+ ++
Sbjct: 463  PWEEWVENLDFNTGIPDAELDEVRNAWKLWKEKLPIRRTSS 503


>gb|KHG01897.1| hypothetical protein F383_22524 [Gossypium arboreum]
          Length = 543

 Score =  618 bits (1593), Expect = 0.0
 Identities = 321/521 (61%), Positives = 392/521 (75%), Gaps = 9/521 (1%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATTQVSPSETALK 1763
            MA+S LR+ ++PW    L    R +     KP ++I    S+        ++    +A K
Sbjct: 1    MAISCLRLSLAPW----LVKTPRPRPTLKVKPFRIICTAQSS---VVDEKELPLPLSACK 53

Query: 1762 WEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKI 1583
            WEPFRKKKVVMRVGYVG+DYRGLQ+QRDEH LSTIE ELE AIFKAGGIRDSNYGDLHKI
Sbjct: 54   WEPFRKKKVVMRVGYVGTDYRGLQLQRDEHELSTIENELETAIFKAGGIRDSNYGDLHKI 113

Query: 1582 GWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQ 1403
             WARSSRTDKGVHSLATMISLK+EIPE AW  DP+G ALA+ +NSYLP+NIRVFSILPSQ
Sbjct: 114  AWARSSRTDKGVHSLATMISLKMEIPEDAWKEDPSGVALANCVNSYLPDNIRVFSILPSQ 173

Query: 1402 RSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVR 1223
            +SFD RREC++RKYSYLLPAEIIG+K +FT  E + H+SDFN ILN FEGEHPFHNYT R
Sbjct: 174  KSFDPRRECNLRKYSYLLPAEIIGIKSHFTEAETNCHISDFNSILNCFEGEHPFHNYTQR 233

Query: 1222 AKYRKQ--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAED---IHE----SNESLAIGTG 1070
            AKYR +  PR ++ NG    R  S    S SE E SD E+   I E    +NE ++ G G
Sbjct: 234  AKYRSRVPPRQTARNGR-PPRAKSHNGSSTSEIEESDVEEDTRIDETSSVNNEEMSCGFG 292

Query: 1069 ENXXXXXXXXXSAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCG 890
            E            +  ++  +  K+++  + V+ARWLHEPDE D++++SHFRKIF+C CG
Sbjct: 293  E---------PVVDSCNSQGNGSKDQSPKV-VIARWLHEPDETDRITSSHFRKIFRCSCG 342

Query: 889  KLEQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLA 710
            KL+   G +YVEISI GESFMLHQIRKMVGTA+A+KR LLPRDIL LSL+KFSR+V+PLA
Sbjct: 343  KLQNSMGFDYVEISIWGESFMLHQIRKMVGTAVAVKRKLLPRDILTLSLAKFSRVVLPLA 402

Query: 709  PSEVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRP 530
            PSEVLILRGN F++RK PGN+ RPEML +VESEEILK +D+FY SVMLPQ+S FLDP + 
Sbjct: 403  PSEVLILRGNTFILRKAPGNVTRPEMLVMVESEEILKAIDEFYKSVMLPQVSKFLDPSKS 462

Query: 529  PWKDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKKTA 407
            PW++WVE LD NT IP+++L+EVR AWKLWKE+   R+ ++
Sbjct: 463  PWEEWVENLDFNTGIPDAELDEVRNAWKLWKEKLPIRRTSS 503


>ref|XP_012078395.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Jatropha
            curcas] gi|802540814|ref|XP_012078403.1| PREDICTED:
            putative tRNA pseudouridine synthase isoform X1 [Jatropha
            curcas] gi|802540816|ref|XP_012078410.1| PREDICTED:
            putative tRNA pseudouridine synthase isoform X1 [Jatropha
            curcas] gi|643740045|gb|KDP45731.1| hypothetical protein
            JCGZ_17338 [Jatropha curcas]
          Length = 516

 Score =  600 bits (1548), Expect = 0.0
 Identities = 315/517 (60%), Positives = 385/517 (74%), Gaps = 5/517 (0%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWL-TPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATTQVSPSET-- 1772
            MA+S LR P+SP+ + +P   + +F  L    P +V +L  S      + +  S S T  
Sbjct: 1    MAISSLRFPLSPFLVKSPREASFKFL-LIPILPSRVSLLCSSCFCSVESPSPPSTSHTLD 59

Query: 1771 --ALKWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYG 1598
              A KW PFRKKKVV+RVGYVG++YRGLQ Q++EH+L TIE ELE+AIFKAGGI DSNYG
Sbjct: 60   YSAQKWVPFRKKKVVLRVGYVGTEYRGLQKQQEEHSLPTIEEELERAIFKAGGILDSNYG 119

Query: 1597 DLHKIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFS 1418
            +LHKI WARSSRTDKGVHSLATMI++K+EIPE AW  DPNG ALA ++N YLP+ IR+FS
Sbjct: 120  NLHKIAWARSSRTDKGVHSLATMITMKMEIPENAWKEDPNGLALAKHVNYYLPDTIRIFS 179

Query: 1417 ILPSQRSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFH 1238
            ILPSQ+SFD RREC  RKYSYLLPAEIIG+K +F+  E+D HLSDFNDIL+ FEGEHPFH
Sbjct: 180  ILPSQKSFDPRRECDQRKYSYLLPAEIIGIKSHFSQAEIDFHLSDFNDILSAFEGEHPFH 239

Query: 1237 NYTVRAKYRKQPRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENXX 1058
            NYTVR+KYRKQ   +S  G V KR  SS  +S +ESE SD E+ + ++E +++   E+  
Sbjct: 240  NYTVRSKYRKQ-FPASKTGQVLKRARSSGERSATESEKSDEEENYRTDEVISLDQIES-- 296

Query: 1057 XXXXXXXSAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQ 878
                    +   D   D LK++     +LARWLHEPDE D++ ASHFRKIF C CG+LE+
Sbjct: 297  --TQKSVKSSFLDQEGDILKDKRANASILARWLHEPDETDRIGASHFRKIFCCSCGRLEK 354

Query: 877  LSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEV 698
              G ++VEISI GESFMLHQIRKM+GTA+A+KR LLPRDIL LSL+KFSRIV+PLAP EV
Sbjct: 355  SRGFDFVEISIWGESFMLHQIRKMIGTAVAVKRGLLPRDILILSLAKFSRIVLPLAPPEV 414

Query: 697  LILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKD 518
            LILRGN+FV+RKRP    RPEMLT+VESEEILK+V++FY ++MLPQ+S FLDP   PWK+
Sbjct: 415  LILRGNSFVLRKRPDKGSRPEMLTIVESEEILKVVNEFYANIMLPQVSKFLDPNGFPWKE 474

Query: 517  WVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKKTA 407
            WVE LD  T IP  QL  VR AWK+WKE F  R   A
Sbjct: 475  WVENLDEYTGIPAEQLVGVRSAWKVWKENFQKRSSLA 511


>ref|XP_015573835.1| PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Ricinus
            communis]
          Length = 500

 Score =  600 bits (1546), Expect = 0.0
 Identities = 313/512 (61%), Positives = 375/512 (73%)
 Frame = -2

Query: 1942 MAVSFLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATTQVSPSETALK 1763
            MA+S LR P     L PL      +    +  + ++  R S+  +A   +Q        K
Sbjct: 1    MALSSLRFP-----LYPLLLRSPRRVFFKFPVIPILPSRLSSQSHAHILSQ--------K 47

Query: 1762 WEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKI 1583
            WEPFRKKKVV+RVGYVG+DYRGLQ Q DEH+LSTIE ELE AIFKAGGI DSNYG+LHKI
Sbjct: 48   WEPFRKKKVVLRVGYVGTDYRGLQKQEDEHSLSTIEAELECAIFKAGGILDSNYGNLHKI 107

Query: 1582 GWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQ 1403
             WARSSRTDKGVHSLATMIS+K+EIPE AW  DPNG ALA  +N YLP+NIR+FSILPSQ
Sbjct: 108  AWARSSRTDKGVHSLATMISMKMEIPENAWKEDPNGIALAECVNYYLPDNIRIFSILPSQ 167

Query: 1402 RSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVR 1223
            +SFD RREC++RKYSYLLPAEIIG+K +FT+ E+DNH+SDFNDILN FEGEHPFHNYT+R
Sbjct: 168  KSFDPRRECNLRKYSYLLPAEIIGIKGHFTSAEIDNHISDFNDILNAFEGEHPFHNYTIR 227

Query: 1222 AKYRKQPRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENXXXXXXX 1043
            +KYRKQ   ++  G V KR  SS  +S SESE SD E+ +E +E   I   ++       
Sbjct: 228  SKYRKQ-YPTAITGRVPKRARSSSERSTSESEKSDGEEDYEIDE---INIEDHNGSIQSS 283

Query: 1042 XXSAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSGVN 863
                         L+++     +LARWL+EPDE D++ ASHFRKIF+C CGKLE   G +
Sbjct: 284  SKFRFSNQQKGGVLEQQQYNAGILARWLYEPDETDRIGASHFRKIFRCSCGKLETSKGFD 343

Query: 862  YVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLILRG 683
            +VEISI GESFMLHQIRKMVGTA+A+KR LLPRDIL LSL+KFSRIV+PLAPSEVL+LRG
Sbjct: 344  FVEISIWGESFMLHQIRKMVGTAVAVKRKLLPRDILPLSLAKFSRIVLPLAPSEVLVLRG 403

Query: 682  NNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVEIL 503
            NNF +RKRP    R EMLT+VESEEIL  V+ FY ++MLPQ+S  LDP   PWK W+E L
Sbjct: 404  NNFSLRKRPDIGARLEMLTMVESEEILNAVNKFYSNIMLPQVSKLLDPCGSPWKIWIEKL 463

Query: 502  DANTSIPESQLNEVRIAWKLWKEEFDSRKKTA 407
            D  TSIP++QL EVR AW LWKE+F +R   A
Sbjct: 464  DEYTSIPDAQLEEVRSAWHLWKEKFQTRNSVA 495