BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00035514
         (370 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP76577.1| Retrovirus-related Pol polyprotein from transposo...   189   3e-57
gb|KYP68472.1| Retrovirus-related Pol polyprotein from transposo...   190   6e-55
gb|ADB85411.1| putative retrotransposon protein [Phyllostachys e...   187   2e-54
ref|WP_042516828.1| hypothetical protein [Lactobacillus brevis] ...   177   3e-54
ref|WP_042516817.1| hypothetical protein [Lactobacillus brevis] ...   179   4e-54
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     189   2e-53
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     189   2e-53
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   189   2e-53
gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japoni...   182   1e-52
gb|ABF96975.1| retrotransposon protein, putative, Ty1-copia subc...   182   2e-52
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   184   5e-52
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   185   5e-52
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   184   1e-51
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   184   1e-51
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     184   1e-51
gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Jap...   181   1e-51
gb|AAL83352.1|AC074282_19 Putative polyprotein [Oryza sativa Jap...   173   1e-51
gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subc...   181   2e-51
emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]         182   2e-51
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   182   5e-51

>gb|KYP76577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 368

 Score =  189 bits (481), Expect = 3e-57
 Identities = 88/123 (71%), Positives = 112/123 (91%)
 Frame = +1

Query: 1   VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
           VCKL+RSIYGLK+ASRSWNI+F++TIK FDF +  +E C+YK+VSGS + F++LYVDDIL
Sbjct: 33  VCKLERSIYGLKKASRSWNIQFNKTIKKFDFVRCEEEPCVYKRVSGSTIIFLMLYVDDIL 92

Query: 181 LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
           LIGND+  LQST+ WLS+QFSMKDLG+A++ILGIKIYRDRS+RM+GLSQSMYID +L+R+
Sbjct: 93  LIGNDIPFLQSTKIWLSEQFSMKDLGEAAYILGIKIYRDRSKRMLGLSQSMYIDTILRRY 152

Query: 361 SME 369
           +ME
Sbjct: 153 NME 155


>gb|KYP68472.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 676

 Score =  190 bits (483), Expect = 6e-55
 Identities = 89/123 (72%), Positives = 112/123 (91%)
 Frame = +1

Query: 1   VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
           VCKL+RSIYGLKQASRSWNI+F++TIK FDF +  +E C+YK+VSGS + F++LYVDDIL
Sbjct: 483 VCKLERSIYGLKQASRSWNIQFNKTIKNFDFVRCEEEPCVYKRVSGSTIIFLMLYVDDIL 542

Query: 181 LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
           LIGND+  LQST+ WLS+QFSMKDLG+A++ILGIKIYRDRS+RM+GLSQSMYI+ +LKR+
Sbjct: 543 LIGNDIPSLQSTKIWLSEQFSMKDLGEAAYILGIKIYRDRSKRMLGLSQSMYINTILKRY 602

Query: 361 SME 369
           +ME
Sbjct: 603 NME 605


>gb|ADB85411.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 566

 Score =  187 bits (474), Expect = 2e-54
 Identities = 88/123 (71%), Positives = 107/123 (86%)
 Frame = +1

Query: 1   VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
           VCKL +SIYGLKQASRSWNIRFDE +K FDF KN +E C+YKKVSGS + F++LYVDDIL
Sbjct: 398 VCKLNKSIYGLKQASRSWNIRFDEVVKGFDFIKNEEEPCVYKKVSGSKLVFLILYVDDIL 457

Query: 181 LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
           L+ ND+ ML+S +T L   FS+KDLGDAS+ILGI+IYRDRS+R+IGLSQ MYIDK+LKRF
Sbjct: 458 LVENDIPMLESVKTSLRNSFSIKDLGDASYILGIRIYRDRSKRLIGLSQDMYIDKVLKRF 517

Query: 361 SME 369
           +M+
Sbjct: 518 NMQ 520


>ref|WP_042516828.1| hypothetical protein [Lactobacillus brevis]
           gi|754297743|gb|KIO93501.1| hypothetical protein
           QP38_2422 [Lactobacillus brevis]
          Length = 216

 Score =  177 bits (449), Expect = 3e-54
 Identities = 86/123 (69%), Positives = 106/123 (86%)
 Frame = +1

Query: 1   VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
           VC LQRSIYGL QA RSWN RFDE IK F F + + E+CIYKKVSGS+VAF++LYVDD+L
Sbjct: 16  VCMLQRSIYGLVQAYRSWNKRFDEVIKAFGFIQVVGESCIYKKVSGSSVAFLILYVDDVL 75

Query: 181 LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
           LIGN+V  L+S + +L+K FSMKDLG+A++ILGIKIYRDRSRR+IGLSQS ++DK+LK+F
Sbjct: 76  LIGNNVEFLESVKDYLNKYFSMKDLGEATYILGIKIYRDRSRRVIGLSQSTFLDKVLKKF 135

Query: 361 SME 369
            ME
Sbjct: 136 KME 138


>ref|WP_042516817.1| hypothetical protein [Lactobacillus brevis]
           gi|754298066|gb|KIO93795.1| hypothetical protein
           QP38_2416 [Lactobacillus brevis]
          Length = 283

 Score =  179 bits (454), Expect = 4e-54
 Identities = 87/123 (70%), Positives = 106/123 (86%)
 Frame = +1

Query: 1   VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
           +CKLQRSIYGL QASRSWN RFDE IK F F + + E+CIYKKVSGS+V F++LYVDDIL
Sbjct: 1   MCKLQRSIYGLVQASRSWNKRFDEVIKAFGFIQVVGESCIYKKVSGSSVVFLILYVDDIL 60

Query: 181 LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
           LIGN+V  L+S + +L+K FSMKDLG+A++ILGIKIYRDRS+R+IGLSQS Y+D +LKRF
Sbjct: 61  LIGNNVEFLESIKDYLNKSFSMKDLGEAAYILGIKIYRDRSKRVIGLSQSTYLDNVLKRF 120

Query: 361 SME 369
            ME
Sbjct: 121 KME 123


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  189 bits (479), Expect = 2e-53
 Identities = 88/123 (71%), Positives = 108/123 (87%)
 Frame = +1

Query: 1    VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
            +CKLQ+SIYGLKQASRSWNIRFDE +K   F KN +E C+YKK+SGSA+ F++LYVDDIL
Sbjct: 857  ICKLQKSIYGLKQASRSWNIRFDELVKALGFLKNEEEPCVYKKISGSALVFLILYVDDIL 916

Query: 181  LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
            LIGND+ ML+S +T L   FSMKDLG+A++ILGI+IYRDRS+R+IGLSQS YIDKMLKRF
Sbjct: 917  LIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKMLKRF 976

Query: 361  SME 369
            +M+
Sbjct: 977  NMQ 979


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  189 bits (479), Expect = 2e-53
 Identities = 89/122 (72%), Positives = 108/122 (88%)
 Frame = +1

Query: 1    VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
            +CKLQ+SIYGLKQASRSWNIRFDE IK F F KN +E C+YKKVSGSA+ F++LYVDDIL
Sbjct: 937  ICKLQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIVFLILYVDDIL 996

Query: 181  LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
            LIGND+ ML+S ++ L   FSMKDLG+A++ILGI+IYRDRS+R+IGLSQS YIDK+LKRF
Sbjct: 997  LIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 1056

Query: 361  SM 366
            +M
Sbjct: 1057 NM 1058


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1073

 Score =  189 bits (479), Expect = 2e-53
 Identities = 88/123 (71%), Positives = 108/123 (87%)
 Frame = +1

Query: 1    VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
            +CKLQ+SIYGLKQASRSWNIRFDE +K   F KN +E C+YKK+SGSA+ F++LYVDDIL
Sbjct: 867  ICKLQKSIYGLKQASRSWNIRFDELVKALGFLKNEEEPCVYKKISGSALVFLILYVDDIL 926

Query: 181  LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
            LIGND+ ML+S +T L   FSMKDLG+A++ILGI+IYRDRS+R+IGLSQS YIDKMLKRF
Sbjct: 927  LIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKMLKRF 986

Query: 361  SME 369
            +M+
Sbjct: 987  NMQ 989


>gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|41393192|gb|AAS01915.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 547

 Score =  182 bits (461), Expect = 1e-52
 Identities = 85/123 (69%), Positives = 106/123 (86%)
 Frame = +1

Query: 1   VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
           +CKLQ+SIYGLKQASRSWNI FDE +K   F KN +E C+YKK+SGSA+ F++LYVDDIL
Sbjct: 227 ICKLQKSIYGLKQASRSWNIHFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDIL 286

Query: 181 LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
           LIGN + ML+S +T L   FSMKDLG+A++ILGI+IYRDRS+R+IGLSQS YIDK+LKRF
Sbjct: 287 LIGNVIPMLESIKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 346

Query: 361 SME 369
           +M+
Sbjct: 347 NMQ 349


>gb|ABF96975.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 562

 Score =  182 bits (461), Expect = 2e-52
 Identities = 85/123 (69%), Positives = 106/123 (86%)
 Frame = +1

Query: 1   VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
           +CKLQ+SIYGLKQASRSWNI FDE +K   F KN +E C+YKK+SGSA+ F++LYVDDIL
Sbjct: 242 ICKLQKSIYGLKQASRSWNIHFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDIL 301

Query: 181 LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
           LIGN + ML+S +T L   FSMKDLG+A++ILGI+IYRDRS+R+IGLSQS YIDK+LKRF
Sbjct: 302 LIGNVIPMLESIKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 361

Query: 361 SME 369
           +M+
Sbjct: 362 NMQ 364


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  184 bits (468), Expect = 5e-52
 Identities = 87/123 (70%), Positives = 106/123 (86%)
 Frame = +1

Query: 1   VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
           VCKLQ+SIYGLKQASRSWNIRFDE IK F F KN +E C+Y KVSGS +  ++LYVDDIL
Sbjct: 517 VCKLQKSIYGLKQASRSWNIRFDEEIKRFGFIKNKEEPCVYMKVSGSTLVILILYVDDIL 576

Query: 181 LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
           L+GND+ ML+S ++ L K FSMKDLGDA++ILGI+IYRDRS+R+IGLSQ MYIDK+L RF
Sbjct: 577 LVGNDIPMLESVKSSLRKSFSMKDLGDAAYILGIRIYRDRSKRLIGLSQEMYIDKVLNRF 636

Query: 361 SME 369
           +M+
Sbjct: 637 NMQ 639


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  185 bits (469), Expect = 5e-52
 Identities = 85/123 (69%), Positives = 107/123 (86%)
 Frame = +1

Query: 1    VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
            +CKL +SIYGLKQASRSWNIRFDE +K   F +N +E C+YKK+SGSA+ F++LYVDDIL
Sbjct: 808  ICKLHQSIYGLKQASRSWNIRFDEVVKALGFVRNEEEPCVYKKISGSALVFLILYVDDIL 867

Query: 181  LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
            LIGND+ ML+S +T L   FSMKDLG+A++ILGI+IYRDRS+R+IGLSQS YIDK+LKRF
Sbjct: 868  LIGNDISMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 927

Query: 361  SME 369
            +M+
Sbjct: 928  NMQ 930


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  184 bits (466), Expect = 1e-51
 Identities = 86/122 (70%), Positives = 105/122 (86%)
 Frame = +1

Query: 1   VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
           VCKL RSIYGLKQASRSWN+RF+E IK FDF +N +E C+YKK SGSAVAF+VLYVDDIL
Sbjct: 584 VCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDIL 643

Query: 181 LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
           L+GND+ +LQS +TWL   FSMKD+G+A++ILGI+IYRDR  ++IGLSQ  YIDK+L RF
Sbjct: 644 LLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRF 703

Query: 361 SM 366
           +M
Sbjct: 704 NM 705


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  184 bits (466), Expect = 1e-51
 Identities = 86/123 (69%), Positives = 107/123 (86%)
 Frame = +1

Query: 1    VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
            +CKLQ+SIY LKQASRSWNIRFDE +K   F KN +E C+YKK+SGSA+ F++LYVDDIL
Sbjct: 886  ICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDIL 945

Query: 181  LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
            LIGND+ ML+S +T L   FSMKDLG+A++ILGI+IYRDRS+R+IGLSQS YIDK+LKRF
Sbjct: 946  LIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 1005

Query: 361  SME 369
            +M+
Sbjct: 1006 NMQ 1008


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  184 bits (466), Expect = 1e-51
 Identities = 86/123 (69%), Positives = 107/123 (86%)
 Frame = +1

Query: 1    VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
            +CKLQ+SIY LKQASRSWNIRFDE +K   F KN +E C+YKK+SGSA+ F++LYVDDIL
Sbjct: 799  ICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDIL 858

Query: 181  LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
            LIGND+ ML+S +T L   FSMKDLG+A++ILGI+IYRDRS+R+IGLSQS YIDK+LKRF
Sbjct: 859  LIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 918

Query: 361  SME 369
            +M+
Sbjct: 919  NMQ 921


>gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Japonica Group]
          Length = 637

 Score =  181 bits (458), Expect = 1e-51
 Identities = 84/123 (68%), Positives = 105/123 (85%)
 Frame = +1

Query: 1   VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
           +CKLQ+SIYGLKQASRSW I FDE +K   F KN +E C+YKK+SGS + F++LYVDDIL
Sbjct: 302 ICKLQKSIYGLKQASRSWKICFDEVVKVLGFVKNEEEPCVYKKISGSTLVFLILYVDDIL 361

Query: 181 LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
           LIGND+ ML+S +T L   FSMKDLG+A++ILGI+IYRDRS+R+IGLSQS YIDK+LKRF
Sbjct: 362 LIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 421

Query: 361 SME 369
           +M+
Sbjct: 422 NMQ 424


>gb|AAL83352.1|AC074282_19 Putative polyprotein [Oryza sativa Japonica Group]
           gi|22711524|gb|AAN04499.1| Putative polyprotein [Oryza
           sativa Japonica Group] gi|31429946|gb|AAP51930.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 309

 Score =  173 bits (439), Expect = 1e-51
 Identities = 81/123 (65%), Positives = 105/123 (85%)
 Frame = +1

Query: 1   VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
           +CKL +SIYGLKQAS SW+IRFDE +K   F KN +E  +YKK+SG+A+ F++LYVDDIL
Sbjct: 124 ICKLHKSIYGLKQASWSWDIRFDEVVKALGFVKNEEEPRVYKKISGNALVFLILYVDDIL 183

Query: 181 LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
           LIGND+ ML+S +T L   FS+KDLG+A++ILGI+IYRDRS+R+IGLSQS YIDK+LKRF
Sbjct: 184 LIGNDIPMLESVKTSLKNSFSVKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 243

Query: 361 SME 369
           +M+
Sbjct: 244 NMQ 246


>gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 649

 Score =  181 bits (458), Expect = 2e-51
 Identities = 84/123 (68%), Positives = 105/123 (85%)
 Frame = +1

Query: 1   VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
           +CKLQ+SIYGLKQASRSW I FDE +K   F KN +E C+YKK+SGS + F++LYVDDIL
Sbjct: 314 ICKLQKSIYGLKQASRSWKICFDEVVKVLGFVKNEEEPCVYKKISGSTLVFLILYVDDIL 373

Query: 181 LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
           LIGND+ ML+S +T L   FSMKDLG+A++ILGI+IYRDRS+R+IGLSQS YIDK+LKRF
Sbjct: 374 LIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 433

Query: 361 SME 369
           +M+
Sbjct: 434 NMQ 436


>emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]
          Length = 746

 Score =  182 bits (461), Expect = 2e-51
 Identities = 85/123 (69%), Positives = 107/123 (86%)
 Frame = +1

Query: 1   VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
           +CKLQ+SIYGLKQASRSWNIRFDE +K   F KN +E C+YKK++ SA+ F++LYVDDIL
Sbjct: 546 ICKLQKSIYGLKQASRSWNIRFDEVVKASGFVKNEEEPCVYKKINRSALGFLILYVDDIL 605

Query: 181 LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
           LIGND+ ML+S +T L   FSMKDLG+A++ILGI+IYRDRS+R+IGLSQS YI+KMLKRF
Sbjct: 606 LIGNDIPMLKSAKTSLKNSFSMKDLGEATYILGIRIYRDRSKRLIGLSQSTYINKMLKRF 665

Query: 361 SME 369
           +M+
Sbjct: 666 NMQ 668


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  182 bits (461), Expect = 5e-51
 Identities = 88/123 (71%), Positives = 104/123 (84%)
 Frame = +1

Query: 1    VCKLQRSIYGLKQASRSWNIRFDETIKTFDFHKNLDETCIYKKVSGSAVAFVVLYVDDIL 180
            VCKLQ+SIYGLKQASRSWNIRFDE IK F F KN +E C+Y KVSGS +  ++LYVDDIL
Sbjct: 933  VCKLQKSIYGLKQASRSWNIRFDEEIKRFGFVKNKEEPCVYMKVSGSTLVILILYVDDIL 992

Query: 181  LIGNDVGMLQSTRTWLSKQFSMKDLGDASFILGIKIYRDRSRRMIGLSQSMYIDKMLKRF 360
            LIGND+ ML+S +  L   FSMKDLG+A++ILGIKIYRDRSRR+IGLSQS YIDK+L RF
Sbjct: 993  LIGNDIPMLESVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYIDKVLIRF 1052

Query: 361  SME 369
            +M+
Sbjct: 1053 NMQ 1055