BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00035236
         (1815 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012843907.1| PREDICTED: pentatricopeptide repeat-containi...   798   0.0  
ref|XP_011075826.1| PREDICTED: pentatricopeptide repeat-containi...   766   0.0  
gb|EYU45363.1| hypothetical protein MIMGU_mgv1a022626mg [Erythra...   723   0.0  
ref|XP_009592011.1| PREDICTED: pentatricopeptide repeat-containi...   657   0.0  
ref|XP_009773679.1| PREDICTED: pentatricopeptide repeat-containi...   654   0.0  
ref|XP_009773680.1| PREDICTED: pentatricopeptide repeat-containi...   651   0.0  
ref|XP_015088942.1| PREDICTED: pentatricopeptide repeat-containi...   639   0.0  
ref|XP_006351327.1| PREDICTED: pentatricopeptide repeat-containi...   636   0.0  
ref|XP_004249757.1| PREDICTED: pentatricopeptide repeat-containi...   635   0.0  
emb|CDP11622.1| unnamed protein product [Coffea canephora]            629   0.0  
ref|XP_010662150.1| PREDICTED: pentatricopeptide repeat-containi...   621   0.0  
ref|XP_007029495.1| Pentatricopeptide repeat-containing protein,...   617   0.0  
ref|XP_010275173.1| PREDICTED: pentatricopeptide repeat-containi...   617   0.0  
gb|KHG03831.1| hypothetical protein F383_26634 [Gossypium arboreum]   613   0.0  
gb|KJB76397.1| hypothetical protein B456_012G086600 [Gossypium r...   610   0.0  
ref|XP_012459106.1| PREDICTED: pentatricopeptide repeat-containi...   610   0.0  
gb|KJB76398.1| hypothetical protein B456_012G086600 [Gossypium r...   610   0.0  
ref|XP_012459104.1| PREDICTED: pentatricopeptide repeat-containi...   610   0.0  
ref|XP_012459103.1| PREDICTED: pentatricopeptide repeat-containi...   610   0.0  
ref|XP_012459102.1| PREDICTED: pentatricopeptide repeat-containi...   610   0.0  

>ref|XP_012843907.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Erythranthe guttata]
          Length = 514

 Score =  798 bits (2060), Expect = 0.0
 Identities = 392/514 (76%), Positives = 446/514 (86%)
 Frame = -3

Query: 1687 MQHMLLFRPPSLAILHEFSSLFQFSLNFHDKCSKPIALISSQTRRCKLAKHSDSESVNSP 1508
            MQ M+LF P   AI H+    FQFS N ++  S PI LI  Q+ R K A+ +DSES+N  
Sbjct: 1    MQLMMLFAPQPRAIFHKPPFFFQFSFNLNENYSNPIYLIYPQSIRSKFARKTDSESINCS 60

Query: 1507 LTTISEHASFNGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLIT 1328
            +TT SEH +  GKE S D+YNEMLCE+CEEGE+DDAMALLSQMEALG RP S SYS LIT
Sbjct: 61   VTTSSEHINSEGKEFSVDVYNEMLCEMCEEGEVDDAMALLSQMEALGVRPYSISYSYLIT 120

Query: 1327 GLGNVGRTLEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLER 1148
             L + GRTLEADA+ QEMLISGC+PKIRL NA+L SCLKKGLLE+ +KVL+AID+LGL R
Sbjct: 121  RLADAGRTLEADAILQEMLISGCKPKIRLLNAMLTSCLKKGLLELSEKVLIAIDDLGLHR 180

Query: 1147 NRKTFEILIDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVL 968
            NRKTFEILIDY+VS+GRLNDTWLVIAEMKRKGY PNSYVYSKIIEIYRDNGMWKKAM V+
Sbjct: 181  NRKTFEILIDYHVSSGRLNDTWLVIAEMKRKGYYPNSYVYSKIIEIYRDNGMWKKAMAVM 240

Query: 967  GEVRAMGMALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPDVETWNSLIRWHCKF 788
            GE+R MG+A+DR IYSSIIDTF ++GELGEALE+FEKMQ+D +KPD+ TWNSLIRWHCK+
Sbjct: 241  GEIREMGLAMDRRIYSSIIDTFARYGELGEALELFEKMQKDGIKPDINTWNSLIRWHCKY 300

Query: 787  GDCSGALDLFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIF 608
            GD  GAL LF RMQE+G YPDPKIF+TIISTLGEQGKWD I+K FENMK +GQQ+SGAI+
Sbjct: 301  GDSGGALGLFGRMQEEGIYPDPKIFVTIISTLGEQGKWDVIRKNFENMKVRGQQKSGAIY 360

Query: 607  GVLVDIYGQYGKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEA 428
             VLVDIYGQYGKFQNA+DC+ ALK EGV+LS ++FCVLA+AYAQQGLCEQ V+VLQLMEA
Sbjct: 361  AVLVDIYGQYGKFQNAEDCVMALKSEGVELSRSVFCVLADAYAQQGLCEQVVKVLQLMEA 420

Query: 427  EGIETNLIMLNMLINAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQ 248
            EG+E NLIMLN+LINAFA AGR  EAL+VYHHI ESGISPDVVTYSTLMKAFLW+KKFDQ
Sbjct: 421  EGMEMNLIMLNVLINAFAIAGRDTEALSVYHHILESGISPDVVTYSTLMKAFLWAKKFDQ 480

Query: 247  VPKIYSEMEASGCSPDRKAREMLKSALLILERKH 146
            VPKIYSEMEASGCSPDRKAREMLKSAL+ LE++H
Sbjct: 481  VPKIYSEMEASGCSPDRKAREMLKSALIALEQRH 514


>ref|XP_011075826.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Sesamum indicum]
          Length = 432

 Score =  766 bits (1977), Expect = 0.0
 Identities = 374/432 (86%), Positives = 407/432 (94%)
 Frame = -3

Query: 1441 MLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADALFQEMLISG 1262
            M+CELCEEGE+++A+ALLSQMEALG RPN  SYSCL+TGLGNVGRTLEADA+FQEMLISG
Sbjct: 1    MICELCEEGELNNALALLSQMEALGYRPNLISYSCLVTGLGNVGRTLEADAIFQEMLISG 60

Query: 1261 CRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYVSAGRLNDTW 1082
            CRPK RLFNALL  CLKKGLLE+ DKVL AID+LGL+RNRKTFEILIDYYVS+GRLNDTW
Sbjct: 61   CRPKTRLFNALLTGCLKKGLLELSDKVLKAIDDLGLDRNRKTFEILIDYYVSSGRLNDTW 120

Query: 1081 LVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTF 902
            LVIAEMKRKGY+PNSYVYSKIIEIYRDNGMWKKAMGVLGEVRA GMALDR IY+SIIDTF
Sbjct: 121  LVIAEMKRKGYNPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAKGMALDRKIYNSIIDTF 180

Query: 901  GKHGELGEALEVFEKMQEDCVKPDVETWNSLIRWHCKFGDCSGALDLFDRMQEQGTYPDP 722
            GK+GELGEALEVFEKMQED +KPDV+TWNSLIRWHCKFG+ SGA+ LF RMQEQG YPDP
Sbjct: 181  GKYGELGEALEVFEKMQEDHIKPDVKTWNSLIRWHCKFGEISGAVTLFARMQEQGIYPDP 240

Query: 721  KIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNADDCIQA 542
            KIFMTIIS LGEQGKWD I+KIFENM+ KGQQRSGAI+ +LVDIYGQYGKFQNA+DCI A
Sbjct: 241  KIFMTIISCLGEQGKWDVIRKIFENMRGKGQQRSGAIYAILVDIYGQYGKFQNAEDCILA 300

Query: 541  LKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGR 362
            LK EG+QLSP++FCVLANAYAQQGLCEQTV+VLQLMEAEG+E NLIMLN+LINAFATAGR
Sbjct: 301  LKSEGIQLSPSMFCVLANAYAQQGLCEQTVKVLQLMEAEGMEPNLIMLNVLINAFATAGR 360

Query: 361  HMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGCSPDRKAREM 182
            HMEAL++Y HIRESGISPDVVTYSTLMKAFLW+KKFDQVPKIYSEMEASGCSPDRKAREM
Sbjct: 361  HMEALSIYQHIRESGISPDVVTYSTLMKAFLWAKKFDQVPKIYSEMEASGCSPDRKAREM 420

Query: 181  LKSALLILERKH 146
            LKSA+ ILER H
Sbjct: 421  LKSAVSILERGH 432


>gb|EYU45363.1| hypothetical protein MIMGU_mgv1a022626mg [Erythranthe guttata]
          Length = 432

 Score =  723 bits (1866), Expect = 0.0
 Identities = 351/432 (81%), Positives = 394/432 (91%)
 Frame = -3

Query: 1441 MLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADALFQEMLISG 1262
            MLCE+CEEGE+DDAMALLSQMEALG RP S SYS LIT L + GRTLEADA+ QEMLISG
Sbjct: 1    MLCEMCEEGEVDDAMALLSQMEALGVRPYSISYSYLITRLADAGRTLEADAILQEMLISG 60

Query: 1261 CRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYVSAGRLNDTW 1082
            C+PKIRL NA+L SCLKKGLLE+ +KVL+AID+LGL RNRKTFEILIDY+VS+GRLNDTW
Sbjct: 61   CKPKIRLLNAMLTSCLKKGLLELSEKVLIAIDDLGLHRNRKTFEILIDYHVSSGRLNDTW 120

Query: 1081 LVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTF 902
            LVIAEMKRKGY PNSYVYSKIIEIYRDNGMWKKAM V+GE+R MG+A+DR IYSSIIDTF
Sbjct: 121  LVIAEMKRKGYYPNSYVYSKIIEIYRDNGMWKKAMAVMGEIREMGLAMDRRIYSSIIDTF 180

Query: 901  GKHGELGEALEVFEKMQEDCVKPDVETWNSLIRWHCKFGDCSGALDLFDRMQEQGTYPDP 722
             ++GELGEALE+FEKMQ+D +KPD+ TWNSLIRWHCK+GD  GAL LF RMQE+G YPDP
Sbjct: 181  ARYGELGEALELFEKMQKDGIKPDINTWNSLIRWHCKYGDSGGALGLFGRMQEEGIYPDP 240

Query: 721  KIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNADDCIQA 542
            KIF+TIISTLGEQGKWD I+K FENMK +GQQ+SGAI+ VLVDIYGQYGKFQNA+DC+ A
Sbjct: 241  KIFVTIISTLGEQGKWDVIRKNFENMKVRGQQKSGAIYAVLVDIYGQYGKFQNAEDCVMA 300

Query: 541  LKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGR 362
            LK EGV+LS ++FCVLA+AYAQQGLCEQ V+VLQLMEAEG+E NLIMLN+LINAFA AGR
Sbjct: 301  LKSEGVELSRSVFCVLADAYAQQGLCEQVVKVLQLMEAEGMEMNLIMLNVLINAFAIAGR 360

Query: 361  HMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGCSPDRKAREM 182
              EAL+VYHHI ESGISPDVVTYSTLMKAFLW+KKFDQVPKIYSEMEASGCSPDRKAREM
Sbjct: 361  DTEALSVYHHILESGISPDVVTYSTLMKAFLWAKKFDQVPKIYSEMEASGCSPDRKAREM 420

Query: 181  LKSALLILERKH 146
            LKSAL+ LE++H
Sbjct: 421  LKSALIALEQRH 432



 Score = 84.3 bits (207), Expect = 8e-14
 Identities = 56/248 (22%), Positives = 118/248 (47%), Gaps = 3/248 (1%)
 Frame = -3

Query: 1453 MYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADALFQEM 1274
            +Y+ ++      GE+ +A+ L  +M+  G +P+  +++ LI      G +  A  LF  M
Sbjct: 172  IYSSIIDTFARYGELGEALELFEKMQKDGIKPDINTWNSLIRWHCKYGDSGGALGLFGRM 231

Query: 1273 LISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYVSAGRL 1094
               G  P  ++F  ++ +  ++G  ++  K    +   G +++   + +L+D Y   G+ 
Sbjct: 232  QEEGIYPDPKIFVTIISTLGEQGKWDVIRKNFENMKVRGQQKSGAIYAVLVDIYGQYGKF 291

Query: 1093 NDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSI 914
             +    +  +K +G   +  V+  + + Y   G+ ++ + VL  + A GM ++  + + +
Sbjct: 292  QNAEDCVMALKSEGVELSRSVFCVLADAYAQQGLCEQVVKVLQLMEAEGMEMNLIMLNVL 351

Query: 913  IDTFGKHGELGEALEVFEKMQEDCVKPDVETWNSLIR---WHCKFGDCSGALDLFDRMQE 743
            I+ F   G   EAL V+  + E  + PDV T+++L++   W  KF        ++  M+ 
Sbjct: 352  INAFAIAGRDTEALSVYHHILESGISPDVVTYSTLMKAFLWAKKFDQVP---KIYSEMEA 408

Query: 742  QGTYPDPK 719
             G  PD K
Sbjct: 409  SGCSPDRK 416



 Score = 62.4 bits (150), Expect = 9e-07
 Identities = 43/216 (19%), Positives = 96/216 (44%)
 Frame = -3

Query: 1477 NGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLE 1298
            +G +   + +N ++   C+ G+   A+ L  +M+  G  P+   +  +I+ LG  G+   
Sbjct: 199  DGIKPDINTWNSLIRWHCKYGDSGGALGLFGRMQEEGIYPDPKIFVTIISTLGEQGKWDV 258

Query: 1297 ADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILID 1118
                F+ M + G +    ++  L+    + G  +  +  ++A+   G+E +R  F +L D
Sbjct: 259  IRKNFENMKVRGQQKSGAIYAVLVDIYGQYGKFQNAEDCVMALKSEGVELSRSVFCVLAD 318

Query: 1117 YYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGMAL 938
             Y   G       V+  M+ +G   N  + + +I  +   G   +A+ V   +   G++ 
Sbjct: 319  AYAQQGLCEQVVKVLQLMEAEGMEMNLIMLNVLINAFAIAGRDTEALSVYHHILESGISP 378

Query: 937  DRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPD 830
            D   YS+++  F    +  +  +++ +M+     PD
Sbjct: 379  DVVTYSTLMKAFLWAKKFDQVPKIYSEMEASGCSPD 414


>ref|XP_009592011.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Nicotiana tomentosiformis]
            gi|697166361|ref|XP_009592012.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Nicotiana tomentosiformis]
            gi|697166363|ref|XP_009592013.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Nicotiana tomentosiformis]
          Length = 523

 Score =  657 bits (1694), Expect = 0.0
 Identities = 328/529 (62%), Positives = 416/529 (78%), Gaps = 13/529 (2%)
 Frame = -3

Query: 1693 MEMQHMLLFRPPSLAILHEFSSLFQFSLNFH-DKCSKPIA------LISSQTRRCKLAKH 1535
            M+M+  LLFR       H    L    L  H D   + +       L+ S+ +RC     
Sbjct: 1    MQMRQKLLFRSSPAICPHGVWDLAPVYLKHHVDPIKRKMLPTSIKLLLQSRAKRCGF--- 57

Query: 1534 SDSESVNSPLTTI----SEHASF--NGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEA 1373
                SVN    TI    +E  +F  NG+E+S D+YN  +CELC EG++D AM LLSQMEA
Sbjct: 58   ----SVNCLFGTIDYSSNEQQTFHINGEEISYDLYNASICELCSEGDVDKAMGLLSQMEA 113

Query: 1372 LGCRPNSTSYSCLITGLGNVGRTLEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEM 1193
            LG   N  SY+ LI  LG+VGRTLEADA+F EML SG RP +++FNALL+S L+KGLL +
Sbjct: 114  LGFHANYLSYTSLIAALGSVGRTLEADAIFHEMLSSGRRPGVKVFNALLRSFLRKGLLRL 173

Query: 1192 CDKVLVAIDELGLERNRKTFEILIDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIE 1013
             DKVL+ +++L +ERN++T+EIL++YYV+AGRL DTWL++++M+R+ Y  NS+VYSKIIE
Sbjct: 174  ADKVLMLLEDLDVERNQETYEILLEYYVNAGRLEDTWLIVSKMRRESYRLNSFVYSKIIE 233

Query: 1012 IYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKP 833
            +YRDNGMWKKA+G++ E+R MG+ LD+ +++SIIDTFGK+GELGEALEVFEKM+ D +KP
Sbjct: 234  LYRDNGMWKKALGIVEEIREMGLRLDKRLFNSIIDTFGKYGELGEALEVFEKMRRDGIKP 293

Query: 832  DVETWNSLIRWHCKFGDCSGALDLFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIF 653
            D  TWNSLIRWHCKFG    A+DLFD MQEQG YPDPKIF+ II+ L EQG+WD I KI 
Sbjct: 294  DFRTWNSLIRWHCKFGHLDTAIDLFDEMQEQGLYPDPKIFIIIITHLVEQGRWDVINKIL 353

Query: 652  ENMKRKGQQRSGAIFGVLVDIYGQYGKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQ 473
            +NM+ +G  +SGAI+ VLVDIYGQ G+FQ+A+ C+ ALKLEG+QLSP+IFCVLA+AYAQQ
Sbjct: 354  KNMQGRGHHKSGAIYAVLVDIYGQQGRFQDAEYCLNALKLEGLQLSPSIFCVLAHAYAQQ 413

Query: 472  GLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYHHIRESGISPDVVTY 293
            GLCEQTV+VLQ+MEAEG+E NLIMLN+LINAF TAGRHMEAL++Y HIRE GI+PDVVTY
Sbjct: 414  GLCEQTVKVLQIMEAEGMEPNLIMLNVLINAFGTAGRHMEALSIYQHIREMGITPDVVTY 473

Query: 292  STLMKAFLWSKKFDQVPKIYSEMEASGCSPDRKAREMLKSALLILERKH 146
            STLMKAF+ +KKFDQVPKIYSEME++GC+PDRKARE+L+SAL+ILE++H
Sbjct: 474  STLMKAFMRAKKFDQVPKIYSEMESAGCTPDRKAREVLQSALMILEQRH 522


>ref|XP_009773679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Nicotiana sylvestris]
          Length = 560

 Score =  654 bits (1687), Expect = 0.0
 Identities = 330/546 (60%), Positives = 419/546 (76%), Gaps = 13/546 (2%)
 Frame = -3

Query: 1744 VLFHWRAKSQEILPR*SMEMQHMLLFRPPSLAILHEFSSLFQFSLNFH-DKCSKPIA--- 1577
            V+  WRA   +     SM+M+  LLFR       H    L    L  H D   + +    
Sbjct: 25   VILSWRAYFLQK----SMQMRQNLLFRSSPAICRHGVWDLVPVYLKHHVDPIKRKMLHTS 80

Query: 1576 ---LISSQTRRCKLAKHSDSESVNSPLTTI----SEHASF--NGKELSCDMYNEMLCELC 1424
               ++ S+ +RC          VN    TI    +E  SF  NG+E+S D+YN  +CELC
Sbjct: 81   IQLILQSRAKRCGFL-------VNCRFGTIDYSSNEQQSFHINGEEISYDLYNASICELC 133

Query: 1423 EEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADALFQEMLISGCRPKIR 1244
             EG++D AM LLSQMEALG   N  SYS LI  LG+VGRTLEADA+F EML SG RP ++
Sbjct: 134  SEGDVDKAMGLLSQMEALGFHANYLSYSSLIAALGSVGRTLEADAIFHEMLSSGRRPGVK 193

Query: 1243 LFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYVSAGRLNDTWLVIAEM 1064
            + NALL+S L+KG L + DKVL+ +++L +ERN++T+EIL++YYV+AGRL DTW ++++M
Sbjct: 194  VVNALLRSFLRKGFLRLADKVLMFLEDLDVERNQETYEILLEYYVNAGRLEDTWSIVSKM 253

Query: 1063 KRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGEL 884
            +R+ Y  NS+VYSKIIE+YRDNGMWKKA+G++ E+R MG+ LD+ +++SIIDTFGK+GEL
Sbjct: 254  RRESYGLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRLDKRLFNSIIDTFGKYGEL 313

Query: 883  GEALEVFEKMQEDCVKPDVETWNSLIRWHCKFGDCSGALDLFDRMQEQGTYPDPKIFMTI 704
            GEALEVFEKM+ D +KPD  TWNSLIRWHCKFG    A+DLFD MQEQG YPDPKIF+ I
Sbjct: 314  GEALEVFEKMRRDGIKPDFRTWNSLIRWHCKFGHLDAAIDLFDEMQEQGLYPDPKIFIII 373

Query: 703  ISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNADDCIQALKLEGV 524
            I+ L EQG+WD I KI +NM+ +G  +SGAI+ VLVDIYGQ G+FQ+A+ C+ ALKLEG+
Sbjct: 374  ITHLVEQGRWDVINKILKNMQGRGHHKSGAIYAVLVDIYGQQGRFQDAEYCLNALKLEGL 433

Query: 523  QLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALA 344
            QLSP+IFCVLA+AYAQQGLCEQTV+VLQ+MEAEG+E NLIMLN+LINAF TAGRHMEAL+
Sbjct: 434  QLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPNLIMLNVLINAFGTAGRHMEALS 493

Query: 343  VYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGCSPDRKAREMLKSALL 164
            +Y HIRE GI+PDVVTYSTLMKAF+ +KKFDQVPKIYSEME++GC+PDRKARE+L+SAL+
Sbjct: 494  IYQHIREMGITPDVVTYSTLMKAFMRAKKFDQVPKIYSEMESAGCTPDRKAREVLQSALM 553

Query: 163  ILERKH 146
            ILE++H
Sbjct: 554  ILEQRH 559


>ref|XP_009773680.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Nicotiana sylvestris]
            gi|698567110|ref|XP_009773681.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Nicotiana sylvestris]
          Length = 523

 Score =  651 bits (1680), Expect = 0.0
 Identities = 325/529 (61%), Positives = 412/529 (77%), Gaps = 13/529 (2%)
 Frame = -3

Query: 1693 MEMQHMLLFRPPSLAILHEFSSLFQFSLNFH-DKCSKPIA------LISSQTRRCKLAKH 1535
            M+M+  LLFR       H    L    L  H D   + +       ++ S+ +RC     
Sbjct: 1    MQMRQNLLFRSSPAICRHGVWDLVPVYLKHHVDPIKRKMLHTSIQLILQSRAKRCGFL-- 58

Query: 1534 SDSESVNSPLTTI----SEHASF--NGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEA 1373
                 VN    TI    +E  SF  NG+E+S D+YN  +CELC EG++D AM LLSQMEA
Sbjct: 59   -----VNCRFGTIDYSSNEQQSFHINGEEISYDLYNASICELCSEGDVDKAMGLLSQMEA 113

Query: 1372 LGCRPNSTSYSCLITGLGNVGRTLEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEM 1193
            LG   N  SYS LI  LG+VGRTLEADA+F EML SG RP +++ NALL+S L+KG L +
Sbjct: 114  LGFHANYLSYSSLIAALGSVGRTLEADAIFHEMLSSGRRPGVKVVNALLRSFLRKGFLRL 173

Query: 1192 CDKVLVAIDELGLERNRKTFEILIDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIE 1013
             DKVL+ +++L +ERN++T+EIL++YYV+AGRL DTW ++++M+R+ Y  NS+VYSKIIE
Sbjct: 174  ADKVLMFLEDLDVERNQETYEILLEYYVNAGRLEDTWSIVSKMRRESYGLNSFVYSKIIE 233

Query: 1012 IYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKP 833
            +YRDNGMWKKA+G++ E+R MG+ LD+ +++SIIDTFGK+GELGEALEVFEKM+ D +KP
Sbjct: 234  LYRDNGMWKKALGIVEEIREMGLRLDKRLFNSIIDTFGKYGELGEALEVFEKMRRDGIKP 293

Query: 832  DVETWNSLIRWHCKFGDCSGALDLFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIF 653
            D  TWNSLIRWHCKFG    A+DLFD MQEQG YPDPKIF+ II+ L EQG+WD I KI 
Sbjct: 294  DFRTWNSLIRWHCKFGHLDAAIDLFDEMQEQGLYPDPKIFIIIITHLVEQGRWDVINKIL 353

Query: 652  ENMKRKGQQRSGAIFGVLVDIYGQYGKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQ 473
            +NM+ +G  +SGAI+ VLVDIYGQ G+FQ+A+ C+ ALKLEG+QLSP+IFCVLA+AYAQQ
Sbjct: 354  KNMQGRGHHKSGAIYAVLVDIYGQQGRFQDAEYCLNALKLEGLQLSPSIFCVLAHAYAQQ 413

Query: 472  GLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYHHIRESGISPDVVTY 293
            GLCEQTV+VLQ+MEAEG+E NLIMLN+LINAF TAGRHMEAL++Y HIRE GI+PDVVTY
Sbjct: 414  GLCEQTVKVLQIMEAEGMEPNLIMLNVLINAFGTAGRHMEALSIYQHIREMGITPDVVTY 473

Query: 292  STLMKAFLWSKKFDQVPKIYSEMEASGCSPDRKAREMLKSALLILERKH 146
            STLMKAF+ +KKFDQVPKIYSEME++GC+PDRKARE+L+SAL+ILE++H
Sbjct: 474  STLMKAFMRAKKFDQVPKIYSEMESAGCTPDRKAREVLQSALMILEQRH 522


>ref|XP_015088942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum pennellii]
            gi|970054609|ref|XP_015088943.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum pennellii]
            gi|970054611|ref|XP_015088944.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum pennellii]
            gi|970054613|ref|XP_015088945.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum pennellii]
          Length = 523

 Score =  639 bits (1648), Expect = 0.0
 Identities = 299/444 (67%), Positives = 382/444 (86%)
 Frame = -3

Query: 1477 NGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLE 1298
            NG+E+S D+YNE +CELC EG+ID AM LLS+MEALG  P+  SYS LI  LG+VGRT E
Sbjct: 79   NGEEISYDLYNESICELCTEGDIDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTAE 138

Query: 1297 ADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILID 1118
            ADA+FQEML S  +P+I++FN LL+S L+KGLL + DKVL+ +D+L ++RN++T+EIL++
Sbjct: 139  ADAIFQEMLCSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYEILLE 198

Query: 1117 YYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGMAL 938
            YYVSAGRL DTWL++A+M+R+ Y  NS+VYSKIIE+YRDNGMWKKA+G++ E+R MG+ L
Sbjct: 199  YYVSAGRLEDTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRL 258

Query: 937  DRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPDVETWNSLIRWHCKFGDCSGALDLF 758
            D+ +++SIIDTFGK+GELGEAL +F+KM+++ +KPD  TWNSLIRWHCK+G    A++LF
Sbjct: 259  DKRLFNSIIDTFGKYGELGEALGMFDKMRQEGIKPDFRTWNSLIRWHCKYGHLDSAIELF 318

Query: 757  DRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQY 578
            + MQEQG YPDPKIF+ I + L EQG+WD I  I ENM+ +G  RSGAI+ VLVDIYGQ 
Sbjct: 319  NEMQEQGLYPDPKIFIIINTHLVEQGRWDDIDTILENMQGRGHHRSGAIYAVLVDIYGQQ 378

Query: 577  GKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIML 398
            G+F++A+ C+ ALKLEG+QLSP+IFCVLA+AYAQQGLCEQTV+VLQ+MEAEG+E NLIML
Sbjct: 379  GRFEDAEYCLNALKLEGLQLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPNLIML 438

Query: 397  NMLINAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEA 218
            NMLINAF  AGRHMEA ++Y HI+E GI+PDV+TYSTLMKAFL +KKFDQVPKIYSEME+
Sbjct: 439  NMLINAFGNAGRHMEAQSIYQHIKEMGITPDVITYSTLMKAFLRAKKFDQVPKIYSEMES 498

Query: 217  SGCSPDRKAREMLKSALLILERKH 146
            +GC+PDRKAREML+SAL+ILE++H
Sbjct: 499  TGCTPDRKAREMLQSALMILEQRH 522



 Score = 81.6 bits (200), Expect = 9e-13
 Identities = 68/336 (20%), Positives = 144/336 (42%)
 Frame = -3

Query: 1219 CLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYVSAGRLNDTWLVIAEMKRKGYSPN 1040
            CLK  +  +  K+L    +L L+   K F  L+      G + ++        R G   +
Sbjct: 27   CLKHHINPVKHKLLHTSCQLILQSRGKRFGFLVSCL--NGTIENSNNEQQTCYRNGEEIS 84

Query: 1039 SYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEALEVFE 860
              +Y++ I      G   KAM +L E+ A+G       YSS+I   G  G   EA  +F+
Sbjct: 85   YDLYNESICELCTEGDIDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTAEADAIFQ 144

Query: 859  KMQEDCVKPDVETWNSLIRWHCKFGDCSGALDLFDRMQEQGTYPDPKIFMTIISTLGEQG 680
            +M     KP ++ +N L+R   + G    A  +   + +     + + +  ++      G
Sbjct: 145  EMLCSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYEILLEYYVSAG 204

Query: 679  KWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNADDCIQALKLEGVQLSPNIFC 500
            + +    I   M+R+    +  ++  ++++Y   G ++ A   ++ ++  G++L   +F 
Sbjct: 205  RLEDTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRLDKRLFN 264

Query: 499  VLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYHHIRES 320
             + + + + G   + + +   M  EGI+ +    N LI      G    A+ +++ ++E 
Sbjct: 265  SIIDTFGKYGELGEALGMFDKMRQEGIKPDFRTWNSLIRWHCKYGHLDSAIELFNEMQEQ 324

Query: 319  GISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASG 212
            G+ PD   +  +    +   ++D +  I   M+  G
Sbjct: 325  GLYPDPKIFIIINTHLVEQGRWDDIDTILENMQGRG 360


>ref|XP_006351327.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum tuberosum]
            gi|565369411|ref|XP_006351329.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum tuberosum]
            gi|971557414|ref|XP_015165937.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum tuberosum]
            gi|971557417|ref|XP_015165938.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum tuberosum]
          Length = 523

 Score =  636 bits (1641), Expect = 0.0
 Identities = 316/526 (60%), Positives = 411/526 (78%), Gaps = 10/526 (1%)
 Frame = -3

Query: 1693 MEMQHMLLFRPPSLAILHEFSSLFQFSLNFHDKCSKPIALISSQTRRCKLAKHSDSES-- 1520
            M+M+  LLFR       H         L  H    K   L +S    C+L   S  +   
Sbjct: 1    MQMRQKLLFRSSPAICPHSVCGFVPVCLKHHINPVKHKMLHTS----CQLILQSRGKRFG 56

Query: 1519 --VNSPLTTI----SEHASF--NGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGC 1364
              VN    TI    +EH +   N +E+S D+YNE +CELC EG++D AM LLS+MEALG 
Sbjct: 57   FLVNCLNGTIENSNNEHQTCYRNDEEISYDLYNESICELCTEGDVDKAMRLLSEMEALGF 116

Query: 1363 RPNSTSYSCLITGLGNVGRTLEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDK 1184
             P+  SYS LI  LG+VGRT EADA+FQEML S  +P+I++FN LL+S L+KGLL + DK
Sbjct: 117  HPSFVSYSSLIAALGSVGRTSEADAIFQEMLCSSRKPRIKVFNILLRSFLRKGLLRLADK 176

Query: 1183 VLVAIDELGLERNRKTFEILIDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYR 1004
            VL+ +D+L ++RN++T+EIL++YYVSAGRL DTWL++A+M+R+ Y  NS+VYSKIIE+YR
Sbjct: 177  VLMLLDDLAVDRNQETYEILLEYYVSAGRLEDTWLIVAKMRRESYPLNSFVYSKIIELYR 236

Query: 1003 DNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPDVE 824
            DNGMWKKA+G++ E+R MG+ LD+ I++SIIDTFGK+GELGEALE+F+KM+++ +KPD  
Sbjct: 237  DNGMWKKALGIVEEIREMGLRLDKRIFNSIIDTFGKYGELGEALEMFDKMRQEGIKPDFR 296

Query: 823  TWNSLIRWHCKFGDCSGALDLFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENM 644
            TWNSLIRWHCK+G    A++LF+ MQ+QG YPDPKIF+ II+ L EQG+W  I  I ENM
Sbjct: 297  TWNSLIRWHCKYGHLDTAIELFNEMQDQGLYPDPKIFIIIITHLVEQGRWAVIDTILENM 356

Query: 643  KRKGQQRSGAIFGVLVDIYGQYGKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQGLC 464
            + +G  +SGAI+ VLVDIYGQ+G+F++A+ C+ +LKLEG+QLSP+IFCVLA+AYAQQGLC
Sbjct: 357  QGRGHHKSGAIYAVLVDIYGQHGRFEDAEYCLNSLKLEGLQLSPSIFCVLAHAYAQQGLC 416

Query: 463  EQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYHHIRESGISPDVVTYSTL 284
            EQTV+VLQ+MEAEG+E NLIMLNMLINAF  AGRHMEA ++Y HI+E GI+PDV+TYSTL
Sbjct: 417  EQTVKVLQIMEAEGMEPNLIMLNMLINAFGNAGRHMEAQSIYLHIKEMGITPDVITYSTL 476

Query: 283  MKAFLWSKKFDQVPKIYSEMEASGCSPDRKAREMLKSALLILERKH 146
            MKAF+ +KKFDQVPKIYSEME++GC+PDRKAREML+SAL+ILE++H
Sbjct: 477  MKAFMRAKKFDQVPKIYSEMESTGCTPDRKAREMLQSALMILEQRH 522


>ref|XP_004249757.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
            gi|723738498|ref|XP_010312136.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
            gi|723738501|ref|XP_010312137.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
            gi|723738504|ref|XP_010312138.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
            gi|723738507|ref|XP_010312139.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
            gi|723738510|ref|XP_010312140.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
            gi|723738513|ref|XP_010312142.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
          Length = 523

 Score =  635 bits (1637), Expect = 0.0
 Identities = 297/444 (66%), Positives = 382/444 (86%)
 Frame = -3

Query: 1477 NGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLE 1298
            NG+E+S D+YNE +CELC EG+ID AM LLS+MEALG  P+  SYS LI  LG+VGRT E
Sbjct: 79   NGEEISYDLYNESICELCTEGDIDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTSE 138

Query: 1297 ADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILID 1118
            ADA+FQEML S  +P+I++FN LL+S L+KGLL + DKVL+ +D+L ++RN++T+EIL++
Sbjct: 139  ADAIFQEMLCSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYEILLE 198

Query: 1117 YYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGMAL 938
            YYVSAGRL DTWL++A+M+R+ Y  NS+VYSKIIE+YRDNGMWKKA+G++ E+R MG+ L
Sbjct: 199  YYVSAGRLEDTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRL 258

Query: 937  DRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPDVETWNSLIRWHCKFGDCSGALDLF 758
            D+ +++SIIDTFGK+GELGEAL +F+KM+++ +KPD  TWNSLIRWHCK+G    A++LF
Sbjct: 259  DKRLFNSIIDTFGKYGELGEALGMFDKMRQEGIKPDFRTWNSLIRWHCKYGHLDTAIELF 318

Query: 757  DRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQY 578
            + MQEQG YPDPKIF+ I + L EQG+WD I  I E+M+ +G  +SGAI+ VLVDIYGQ 
Sbjct: 319  NEMQEQGLYPDPKIFIIINTHLVEQGRWDDIDTILESMQGRGHHKSGAIYAVLVDIYGQQ 378

Query: 577  GKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIML 398
            G+F++A+ C+ ALKLEG+QLSP+IFCVLA+AYAQQGLCEQTV+VLQ+MEAEG+E NLIML
Sbjct: 379  GRFEDAEYCLNALKLEGLQLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPNLIML 438

Query: 397  NMLINAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEA 218
            NMLINAF  AGRHMEA ++Y HI+E GI+PDV+TYSTLMKAFL +KKFDQVPKIYSEME+
Sbjct: 439  NMLINAFGNAGRHMEAQSIYQHIKEMGITPDVITYSTLMKAFLRAKKFDQVPKIYSEMES 498

Query: 217  SGCSPDRKAREMLKSALLILERKH 146
            +GC+PDRKAREML+SAL+ILE++H
Sbjct: 499  TGCTPDRKAREMLQSALMILEQRH 522



 Score = 81.6 bits (200), Expect = 9e-13
 Identities = 68/336 (20%), Positives = 145/336 (43%)
 Frame = -3

Query: 1219 CLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYVSAGRLNDTWLVIAEMKRKGYSPN 1040
            CLK  +  +  K+L    +L L+   K F  L++     G + ++        R G   +
Sbjct: 27   CLKHHINPVKHKLLHTSCQLILQSRGKRFGFLVNCL--NGTIENSNNEQQTCYRNGEEIS 84

Query: 1039 SYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEALEVFE 860
              +Y++ I      G   KAM +L E+ A+G       YSS+I   G  G   EA  +F+
Sbjct: 85   YDLYNESICELCTEGDIDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTSEADAIFQ 144

Query: 859  KMQEDCVKPDVETWNSLIRWHCKFGDCSGALDLFDRMQEQGTYPDPKIFMTIISTLGEQG 680
            +M     KP ++ +N L+R   + G    A  +   + +     + + +  ++      G
Sbjct: 145  EMLCSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYEILLEYYVSAG 204

Query: 679  KWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNADDCIQALKLEGVQLSPNIFC 500
            + +    I   M+R+    +  ++  ++++Y   G ++ A   ++ ++  G++L   +F 
Sbjct: 205  RLEDTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRLDKRLFN 264

Query: 499  VLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYHHIRES 320
             + + + + G   + + +   M  EGI+ +    N LI      G    A+ +++ ++E 
Sbjct: 265  SIIDTFGKYGELGEALGMFDKMRQEGIKPDFRTWNSLIRWHCKYGHLDTAIELFNEMQEQ 324

Query: 319  GISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASG 212
            G+ PD   +  +    +   ++D +  I   M+  G
Sbjct: 325  GLYPDPKIFIIINTHLVEQGRWDDIDTILESMQGRG 360


>emb|CDP11622.1| unnamed protein product [Coffea canephora]
          Length = 555

 Score =  629 bits (1621), Expect = 0.0
 Identities = 310/522 (59%), Positives = 403/522 (77%), Gaps = 6/522 (1%)
 Frame = -3

Query: 1693 MEMQHMLLFRPPSLAILHEFSSLFQFSLNFHDKCSKPIALIS---SQTRRCKLAKHSD-- 1529
            MEMQ ++       A +   S LF    N  D      ++++   S++  CKL  +    
Sbjct: 26   MEMQRLMPCNSRLAAFISCRSCLFAVCQNSRDNWIPRSSVVNVPFSRSGTCKLCLNPPKC 85

Query: 1528 SESVNSPLTTISEHASFNGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNST 1349
            S   N+    +      +G+ELS   +NE +CE+C  GE+++AM+LLSQMEALG RPN  
Sbjct: 86   SNDANNCSNFVQPFGREDGEELSYISFNESICEMCMSGEVNEAMSLLSQMEALGSRPNLK 145

Query: 1348 SYSCLITGLGNVGRTLEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAI 1169
            SY+ LIT LGNVGRTLEADA+FQEM   G RP+++ FN LL+  L+KGL  + DKVL+ +
Sbjct: 146  SYTLLITALGNVGRTLEADAIFQEMTSLGYRPRVKAFNVLLRCFLRKGLPGLADKVLLTL 205

Query: 1168 DELGLERNRKTFEILIDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMW 989
            D+LG++RNR+T+EIL++Y+  A RL DTWLVIAEM+R+GY PNS+VYSK+IE+YRDNGMW
Sbjct: 206  DDLGIQRNRETYEILLEYHARAKRLADTWLVIAEMRREGYHPNSFVYSKVIELYRDNGMW 265

Query: 988  KKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPDVETWNSL 809
            +KA  ++GE+R MG++LDR IY+SIIDTF K+GELGEA+EVF+ MQ + + PD+ TWNSL
Sbjct: 266  RKATSIVGEIRGMGLSLDRKIYNSIIDTFCKYGELGEAVEVFKTMQLEGIMPDITTWNSL 325

Query: 808  IRWHCKFGDCSGALDLFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQ 629
            IRWHCKFGD S ALD+F  MQEQG YPDPKIF+TIIS L EQGKWD IKK  EN+K +G 
Sbjct: 326  IRWHCKFGDVSNALDMFISMQEQGLYPDPKIFITIISRLAEQGKWDVIKKTSENIKHRGH 385

Query: 628  QRSGAIFGVLVDIYGQYGKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVR 449
             RSGAI+ VL DIYGQYG+FQ+AD+CI AL+ EGV+LS + FC++ANAYAQQGLCEQT++
Sbjct: 386  HRSGAIYAVLADIYGQYGRFQDADNCINALRSEGVKLSASTFCIIANAYAQQGLCEQTIK 445

Query: 448  VLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYHHIRESGISPDV-VTYSTLMKAF 272
            VLQLMEAEGIE NL+MLN+L+NAF+TAGRH+EAL+V++HIRE+       +TYSTLMKAF
Sbjct: 446  VLQLMEAEGIELNLLMLNVLLNAFSTAGRHLEALSVFNHIRETARPLTFSITYSTLMKAF 505

Query: 271  LWSKKFDQVPKIYSEMEASGCSPDRKAREMLKSALLILERKH 146
            + +KKFDQVP IY EME +GC+PDRKAREML++A ++L+++H
Sbjct: 506  IRAKKFDQVPSIYKEMEYAGCTPDRKAREMLQAAEMVLQQRH 547


>ref|XP_010662150.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Vitis vinifera]
          Length = 503

 Score =  621 bits (1601), Expect = 0.0
 Identities = 308/499 (61%), Positives = 389/499 (77%), Gaps = 15/499 (3%)
 Frame = -3

Query: 1597 KCSKPIALISSQTRRCKLAKHSDSESVNSPL--TTISEHA-------------SFNGKEL 1463
            KC + ++L   Q  + K  K     S+  P   T I+ H              S NG+EL
Sbjct: 5    KCCQSVSLFHQQLGQYKPMKMHFMVSLMGPPFPTLINTHMKNKHQVSVEEVSISENGEEL 64

Query: 1462 SCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADALF 1283
            S  +YN  + E C  G++D AM LL+QMEALG   +  SY+ +I  LG+VGRTLEA+A+F
Sbjct: 65   SGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIF 124

Query: 1282 QEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYVSA 1103
            +EM+  G +  +R++N +L+SCL+KGLLE+ DKVL  +D LG+ RNR T+E L+DYY  A
Sbjct: 125  REMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRA 184

Query: 1102 GRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGMALDRSIY 923
            GRLND W VI EM R G+ P+S+VYSK+I +YRDNGMWKKAM ++ E+R MG++LD+ IY
Sbjct: 185  GRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIY 244

Query: 922  SSIIDTFGKHGELGEALEVFEKMQEDCVKPDVETWNSLIRWHCKFGDCSGALDLFDRMQE 743
            +SIIDTFGK GEL EALEVFEKMQE+ VKPD+ TWNSLI+WHCK GD   AL+LF +MQE
Sbjct: 245  NSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQE 304

Query: 742  QGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQN 563
            +G YPDPKIF+TIIS LGEQGKWD IK+ FENMK +G QRSGAI+ +LVDIYGQYG+FQ 
Sbjct: 305  EGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQG 364

Query: 562  ADDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLIN 383
             ++CI ALK EG+Q S ++FCVLANAYAQQGLCEQTV+VLQLME EGIE NLIMLNMLIN
Sbjct: 365  PEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLIN 424

Query: 382  AFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGCSP 203
            AF  AGRH+EAL+VYHHI+++GISPDVVTYSTLMKA + ++KFD+VP+IY EME++GC+P
Sbjct: 425  AFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGCTP 484

Query: 202  DRKAREMLKSALLILERKH 146
            DRKAREML++ALL+L+++H
Sbjct: 485  DRKAREMLQTALLVLQQRH 503


>ref|XP_007029495.1| Pentatricopeptide repeat-containing protein, putative isoform 1
            [Theobroma cacao] gi|508718100|gb|EOY09997.1|
            Pentatricopeptide repeat-containing protein, putative
            isoform 1 [Theobroma cacao]
          Length = 513

 Score =  617 bits (1592), Expect = 0.0
 Identities = 292/446 (65%), Positives = 376/446 (84%)
 Frame = -3

Query: 1483 SFNGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRT 1304
            S +G+EL+ +++N+ +   C+ G++D+AM L++ MEA+G  PNS SY  LI  LG+VGRT
Sbjct: 68   SNSGEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRT 127

Query: 1303 LEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEIL 1124
            LEADALFQEM+  G +P+IRLFN LLK  L+KGLL +  KVLV +DE G+ +N++T+EIL
Sbjct: 128  LEADALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEIL 187

Query: 1123 IDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGM 944
            +DYYV+AGRL DTW+V+ EMK KG   NS+VYSKII +YRDNGMW+KA+G++ E+R  G+
Sbjct: 188  LDYYVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGI 247

Query: 943  ALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPDVETWNSLIRWHCKFGDCSGALD 764
            +LDR IY+SIIDTFGK+GEL EALEVFEKM+++ ++PD+ TWNSLI+WHCK GD + AL+
Sbjct: 248  SLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALE 307

Query: 763  LFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYG 584
            LF  MQEQG YPDPKIFM++IS LGE GKWD IKK FENMK +G Q  GAI+ +LVDIYG
Sbjct: 308  LFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYG 367

Query: 583  QYGKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLI 404
            QYG+FQ+A+ CI ALK EG+  S ++FCVLANAYAQQG CEQTV+VLQ+MEAEGIE N++
Sbjct: 368  QYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEPNIV 427

Query: 403  MLNMLINAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEM 224
            MLN+LINAF  AGRH EAL++YHHIR+SGISPDV+TYSTLMKAF+ +KKFD+VP+IY EM
Sbjct: 428  MLNVLINAFGIAGRHEEALSIYHHIRDSGISPDVITYSTLMKAFIRAKKFDRVPEIYREM 487

Query: 223  EASGCSPDRKAREMLKSALLILERKH 146
            E+SGC+PDRKAR+ML++AL++LE++H
Sbjct: 488  ESSGCTPDRKARQMLQTALMVLEQRH 513



 Score = 95.1 bits (235), Expect = 4e-17
 Identities = 62/260 (23%), Positives = 123/260 (47%)
 Frame = -3

Query: 1498 ISEHASFNGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLG 1319
            I E     G  L   +YN ++    + GE+ +A+ +  +M+    RP+ T+++ LI    
Sbjct: 238  IVEEIREKGISLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHC 297

Query: 1318 NVGRTLEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRK 1139
              G   +A  LF EM   G  P  ++F +L+    + G  ++  K    +   G +    
Sbjct: 298  KAGDLTKALELFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGA 357

Query: 1138 TFEILIDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEV 959
             + IL+D Y   GR  D  + I+ +K +G  P++ ++  +   Y   G  ++ + VL  +
Sbjct: 358  IYAILVDIYGQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIM 417

Query: 958  RAMGMALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPDVETWNSLIRWHCKFGDC 779
             A G+  +  + + +I+ FG  G   EAL ++  +++  + PDV T+++L++   +    
Sbjct: 418  EAEGIEPNIVMLNVLINAFGIAGRHEEALSIYHHIRDSGISPDVITYSTLMKAFIRAKKF 477

Query: 778  SGALDLFDRMQEQGTYPDPK 719
                +++  M+  G  PD K
Sbjct: 478  DRVPEIYREMESSGCTPDRK 497



 Score = 64.7 bits (156), Expect = 2e-07
 Identities = 48/232 (20%), Positives = 101/232 (43%)
 Frame = -3

Query: 1525 ESVNSPLTTISEHASFNGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTS 1346
            ES+   +TT                +N ++   C+ G++  A+ L ++M+  G  P+   
Sbjct: 280  ESIRPDITT----------------WNSLIQWHCKAGDLTKALELFTEMQEQGLYPDPKI 323

Query: 1345 YSCLITGLGNVGRTLEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAID 1166
            +  LI+ LG +G+       F+ M   G +    ++  L+    + G  +  +  + A+ 
Sbjct: 324  FMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYGRFQDAEVCISALK 383

Query: 1165 ELGLERNRKTFEILIDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWK 986
              GL  +   F +L + Y   G    T  V+  M+ +G  PN  + + +I  +   G  +
Sbjct: 384  SEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEPNIVMLNVLINAFGIAGRHE 443

Query: 985  KAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPD 830
            +A+ +   +R  G++ D   YS+++  F +  +     E++ +M+     PD
Sbjct: 444  EALSIYHHIRDSGISPDVITYSTLMKAFIRAKKFDRVPEIYREMESSGCTPD 495


>ref|XP_010275173.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Nelumbo nucifera]
          Length = 536

 Score =  617 bits (1591), Expect = 0.0
 Identities = 293/467 (62%), Positives = 378/467 (80%)
 Frame = -3

Query: 1546 LAKHSDSESVNSPLTTISEHASFNGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALG 1367
            +A      ++N+ +   S  +  N +E+SC++YN  +   C EG+ID +MALL+QMEALG
Sbjct: 58   MASRRCPSTINNLIFNNSNISCSNKEEISCEIYNISIRNYCREGDIDKSMALLAQMEALG 117

Query: 1366 CRPNSTSYSCLITGLGNVGRTLEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCD 1187
             RPN  SY+C+I  LG+VGRTLEADA+FQEM  SG  P+++ +N LLK  L+KGLL + D
Sbjct: 118  IRPNLISYTCVIEALGSVGRTLEADAIFQEMRWSGFEPRVKAYNVLLKGFLRKGLLGLAD 177

Query: 1186 KVLVAIDELGLERNRKTFEILIDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIY 1007
            +VL+ + +L + RN+ T+EIL+DYYV AGRL+DTW VI EMKR+G   NSYVYSKII +Y
Sbjct: 178  RVLLEMGDLDIGRNQDTYEILLDYYVHAGRLDDTWSVINEMKREGLKLNSYVYSKIINLY 237

Query: 1006 RDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPDV 827
            RDNGMW+KAM VL E+R MG+ LDR IY+SIIDTFGK+GEL EA+  FE MQ++ ++PD+
Sbjct: 238  RDNGMWQKAMDVLREMREMGVPLDRRIYNSIIDTFGKYGELEEAVGAFENMQKEGIRPDI 297

Query: 826  ETWNSLIRWHCKFGDCSGALDLFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFEN 647
             TWNSLIRWHCK G+  GAL+   +MQEQG YPDPKIF+ IIS L EQGKW+ IKK FEN
Sbjct: 298  MTWNSLIRWHCKAGEVGGALEFLTKMQEQGLYPDPKIFVNIISRLAEQGKWNAIKKNFEN 357

Query: 646  MKRKGQQRSGAIFGVLVDIYGQYGKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQGL 467
            MK +G ++SG I+ VL DIYGQYG+FQ+AD+C+ ALK EG++ S N+FC LANAYAQQGL
Sbjct: 358  MKHRGLRKSGVIYAVLADIYGQYGRFQDADECLLALKSEGLKPSANMFCALANAYAQQGL 417

Query: 466  CEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYHHIRESGISPDVVTYST 287
            CEQTVR+LQLMEA+GIE NLIMLNMLINAF  AGRH+EAL++++H+++SGI+PDVVTYST
Sbjct: 418  CEQTVRILQLMEADGIEPNLIMLNMLINAFGVAGRHLEALSIFYHMKDSGINPDVVTYST 477

Query: 286  LMKAFLWSKKFDQVPKIYSEMEASGCSPDRKAREMLKSALLILERKH 146
            LMKAF+ ++KFDQVP IY EME +GC+PDR+AREML++AL++LE++H
Sbjct: 478  LMKAFIRARKFDQVPGIYKEMECAGCTPDRRAREMLQNALMVLEQRH 524


>gb|KHG03831.1| hypothetical protein F383_26634 [Gossypium arboreum]
          Length = 511

 Score =  613 bits (1580), Expect = 0.0
 Identities = 295/446 (66%), Positives = 371/446 (83%)
 Frame = -3

Query: 1483 SFNGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRT 1304
            S +G+ELS +++N+ + E C+ G++D+AM L++Q+EA+G  PNS SY  LI  LG+VGRT
Sbjct: 66   SNSGEELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRT 125

Query: 1303 LEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEIL 1124
            LEAD LFQEM+  G +P+IRLFNALLK  LKKGLL +  K LV +D +G+ +N++T+EIL
Sbjct: 126  LEADVLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEIL 185

Query: 1123 IDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGM 944
            +DYYVSAGRL DTW+V+ EMK  G   +S+VY K+I +YRDNGMWKKA+G++ E+R  G+
Sbjct: 186  LDYYVSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGI 245

Query: 943  ALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPDVETWNSLIRWHCKFGDCSGALD 764
            +LDR IY+SIIDTFGK+GELGEALEVFEKM+++ + PD+ TWNSLIRWHCK GD + AL 
Sbjct: 246  SLDRQIYNSIIDTFGKYGELGEALEVFEKMKQESILPDITTWNSLIRWHCKAGDLTKALQ 305

Query: 763  LFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYG 584
            LF  MQEQG YPDPKI M++IS LGE GKWD IKK FENMK +G+Q  GAI+ +LVDIYG
Sbjct: 306  LFTEMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMKCRGRQEVGAIYAMLVDIYG 365

Query: 583  QYGKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLI 404
            QYG+FQ+A+D I ALK EG   S ++FCVLANAYAQQG CEQTV+VLQLMEAEGIE N+I
Sbjct: 366  QYGRFQDAEDFITALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELNII 425

Query: 403  MLNMLINAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEM 224
            MLN+LINAF  AGRH EAL++Y HIRESGISPDVVTYSTLMKAF+ +KKFD+VP+IY EM
Sbjct: 426  MLNVLINAFGIAGRHEEALSIYQHIRESGISPDVVTYSTLMKAFIRAKKFDKVPEIYKEM 485

Query: 223  EASGCSPDRKAREMLKSALLILERKH 146
            E+ GC+PDRKAR+ML++AL++LER+H
Sbjct: 486  ESYGCTPDRKARQMLQTALMVLERRH 511


>gb|KJB76397.1| hypothetical protein B456_012G086600 [Gossypium raimondii]
          Length = 482

 Score =  610 bits (1572), Expect = 0.0
 Identities = 293/446 (65%), Positives = 370/446 (82%)
 Frame = -3

Query: 1483 SFNGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRT 1304
            S +G+ELS +++N+ + E C+ G++D+AM L++Q+EA+G  PNS SY  LI  LG+VGRT
Sbjct: 37   SNSGEELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRT 96

Query: 1303 LEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEIL 1124
            LEAD LFQEM+  G +P+IRLFNALLK  LKKGLL +  K LV +D +G+ +N++T+EIL
Sbjct: 97   LEADVLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEIL 156

Query: 1123 IDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGM 944
            +DYYVSAGRL DTW+V+ EMK  G   +S+VY K+I +YRDNGMWKKA+G++ E+R  G+
Sbjct: 157  LDYYVSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGI 216

Query: 943  ALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPDVETWNSLIRWHCKFGDCSGALD 764
            +LDR IY+SIIDTFGK+GELGEALEVFEKM+++ + PD+ TWNSLIRWHCK GD + AL 
Sbjct: 217  SLDRQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQ 276

Query: 763  LFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYG 584
            LF  MQEQG YPDPKI M++IS LGE GKWD IKK FENM  +G+Q  GAI+ +LVDIYG
Sbjct: 277  LFTEMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYG 336

Query: 583  QYGKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLI 404
            QYG+FQ+A+D I ALK EG   S ++FCVLANAYAQQG CEQTV+VLQLMEAEGIE N+I
Sbjct: 337  QYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELNII 396

Query: 403  MLNMLINAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEM 224
            MLN+LINAF  AGRH EAL++Y HI+ESGISPDVVTYSTLMKAF+ +KKFD+VP+IY EM
Sbjct: 397  MLNVLINAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLMKAFIRAKKFDKVPEIYKEM 456

Query: 223  EASGCSPDRKAREMLKSALLILERKH 146
            E+ GC+PDRKAR+ML++AL++LER+H
Sbjct: 457  ESYGCTPDRKARQMLQTALMVLERRH 482


>ref|XP_012459106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X4 [Gossypium raimondii]
          Length = 485

 Score =  610 bits (1572), Expect = 0.0
 Identities = 293/446 (65%), Positives = 370/446 (82%)
 Frame = -3

Query: 1483 SFNGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRT 1304
            S +G+ELS +++N+ + E C+ G++D+AM L++Q+EA+G  PNS SY  LI  LG+VGRT
Sbjct: 37   SNSGEELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRT 96

Query: 1303 LEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEIL 1124
            LEAD LFQEM+  G +P+IRLFNALLK  LKKGLL +  K LV +D +G+ +N++T+EIL
Sbjct: 97   LEADVLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEIL 156

Query: 1123 IDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGM 944
            +DYYVSAGRL DTW+V+ EMK  G   +S+VY K+I +YRDNGMWKKA+G++ E+R  G+
Sbjct: 157  LDYYVSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGI 216

Query: 943  ALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPDVETWNSLIRWHCKFGDCSGALD 764
            +LDR IY+SIIDTFGK+GELGEALEVFEKM+++ + PD+ TWNSLIRWHCK GD + AL 
Sbjct: 217  SLDRQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQ 276

Query: 763  LFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYG 584
            LF  MQEQG YPDPKI M++IS LGE GKWD IKK FENM  +G+Q  GAI+ +LVDIYG
Sbjct: 277  LFTEMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYG 336

Query: 583  QYGKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLI 404
            QYG+FQ+A+D I ALK EG   S ++FCVLANAYAQQG CEQTV+VLQLMEAEGIE N+I
Sbjct: 337  QYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELNII 396

Query: 403  MLNMLINAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEM 224
            MLN+LINAF  AGRH EAL++Y HI+ESGISPDVVTYSTLMKAF+ +KKFD+VP+IY EM
Sbjct: 397  MLNVLINAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLMKAFIRAKKFDKVPEIYKEM 456

Query: 223  EASGCSPDRKAREMLKSALLILERKH 146
            E+ GC+PDRKAR+ML++AL++LER+H
Sbjct: 457  ESYGCTPDRKARQMLQTALMVLERRH 482


>gb|KJB76398.1| hypothetical protein B456_012G086600 [Gossypium raimondii]
          Length = 487

 Score =  610 bits (1572), Expect = 0.0
 Identities = 293/446 (65%), Positives = 370/446 (82%)
 Frame = -3

Query: 1483 SFNGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRT 1304
            S +G+ELS +++N+ + E C+ G++D+AM L++Q+EA+G  PNS SY  LI  LG+VGRT
Sbjct: 42   SNSGEELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRT 101

Query: 1303 LEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEIL 1124
            LEAD LFQEM+  G +P+IRLFNALLK  LKKGLL +  K LV +D +G+ +N++T+EIL
Sbjct: 102  LEADVLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEIL 161

Query: 1123 IDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGM 944
            +DYYVSAGRL DTW+V+ EMK  G   +S+VY K+I +YRDNGMWKKA+G++ E+R  G+
Sbjct: 162  LDYYVSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGI 221

Query: 943  ALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPDVETWNSLIRWHCKFGDCSGALD 764
            +LDR IY+SIIDTFGK+GELGEALEVFEKM+++ + PD+ TWNSLIRWHCK GD + AL 
Sbjct: 222  SLDRQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQ 281

Query: 763  LFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYG 584
            LF  MQEQG YPDPKI M++IS LGE GKWD IKK FENM  +G+Q  GAI+ +LVDIYG
Sbjct: 282  LFTEMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYG 341

Query: 583  QYGKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLI 404
            QYG+FQ+A+D I ALK EG   S ++FCVLANAYAQQG CEQTV+VLQLMEAEGIE N+I
Sbjct: 342  QYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELNII 401

Query: 403  MLNMLINAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEM 224
            MLN+LINAF  AGRH EAL++Y HI+ESGISPDVVTYSTLMKAF+ +KKFD+VP+IY EM
Sbjct: 402  MLNVLINAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLMKAFIRAKKFDKVPEIYKEM 461

Query: 223  EASGCSPDRKAREMLKSALLILERKH 146
            E+ GC+PDRKAR+ML++AL++LER+H
Sbjct: 462  ESYGCTPDRKARQMLQTALMVLERRH 487


>ref|XP_012459104.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X3 [Gossypium raimondii]
            gi|823252980|ref|XP_012459105.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X3 [Gossypium raimondii]
          Length = 490

 Score =  610 bits (1572), Expect = 0.0
 Identities = 293/446 (65%), Positives = 370/446 (82%)
 Frame = -3

Query: 1483 SFNGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRT 1304
            S +G+ELS +++N+ + E C+ G++D+AM L++Q+EA+G  PNS SY  LI  LG+VGRT
Sbjct: 42   SNSGEELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRT 101

Query: 1303 LEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEIL 1124
            LEAD LFQEM+  G +P+IRLFNALLK  LKKGLL +  K LV +D +G+ +N++T+EIL
Sbjct: 102  LEADVLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEIL 161

Query: 1123 IDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGM 944
            +DYYVSAGRL DTW+V+ EMK  G   +S+VY K+I +YRDNGMWKKA+G++ E+R  G+
Sbjct: 162  LDYYVSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGI 221

Query: 943  ALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPDVETWNSLIRWHCKFGDCSGALD 764
            +LDR IY+SIIDTFGK+GELGEALEVFEKM+++ + PD+ TWNSLIRWHCK GD + AL 
Sbjct: 222  SLDRQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQ 281

Query: 763  LFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYG 584
            LF  MQEQG YPDPKI M++IS LGE GKWD IKK FENM  +G+Q  GAI+ +LVDIYG
Sbjct: 282  LFTEMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYG 341

Query: 583  QYGKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLI 404
            QYG+FQ+A+D I ALK EG   S ++FCVLANAYAQQG CEQTV+VLQLMEAEGIE N+I
Sbjct: 342  QYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELNII 401

Query: 403  MLNMLINAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEM 224
            MLN+LINAF  AGRH EAL++Y HI+ESGISPDVVTYSTLMKAF+ +KKFD+VP+IY EM
Sbjct: 402  MLNVLINAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLMKAFIRAKKFDKVPEIYKEM 461

Query: 223  EASGCSPDRKAREMLKSALLILERKH 146
            E+ GC+PDRKAR+ML++AL++LER+H
Sbjct: 462  ESYGCTPDRKARQMLQTALMVLERRH 487


>ref|XP_012459103.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Gossypium raimondii]
            gi|763809494|gb|KJB76396.1| hypothetical protein
            B456_012G086600 [Gossypium raimondii]
          Length = 511

 Score =  610 bits (1572), Expect = 0.0
 Identities = 293/446 (65%), Positives = 370/446 (82%)
 Frame = -3

Query: 1483 SFNGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRT 1304
            S +G+ELS +++N+ + E C+ G++D+AM L++Q+EA+G  PNS SY  LI  LG+VGRT
Sbjct: 66   SNSGEELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRT 125

Query: 1303 LEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEIL 1124
            LEAD LFQEM+  G +P+IRLFNALLK  LKKGLL +  K LV +D +G+ +N++T+EIL
Sbjct: 126  LEADVLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEIL 185

Query: 1123 IDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGM 944
            +DYYVSAGRL DTW+V+ EMK  G   +S+VY K+I +YRDNGMWKKA+G++ E+R  G+
Sbjct: 186  LDYYVSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGI 245

Query: 943  ALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPDVETWNSLIRWHCKFGDCSGALD 764
            +LDR IY+SIIDTFGK+GELGEALEVFEKM+++ + PD+ TWNSLIRWHCK GD + AL 
Sbjct: 246  SLDRQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQ 305

Query: 763  LFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYG 584
            LF  MQEQG YPDPKI M++IS LGE GKWD IKK FENM  +G+Q  GAI+ +LVDIYG
Sbjct: 306  LFTEMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYG 365

Query: 583  QYGKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLI 404
            QYG+FQ+A+D I ALK EG   S ++FCVLANAYAQQG CEQTV+VLQLMEAEGIE N+I
Sbjct: 366  QYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELNII 425

Query: 403  MLNMLINAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEM 224
            MLN+LINAF  AGRH EAL++Y HI+ESGISPDVVTYSTLMKAF+ +KKFD+VP+IY EM
Sbjct: 426  MLNVLINAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLMKAFIRAKKFDKVPEIYKEM 485

Query: 223  EASGCSPDRKAREMLKSALLILERKH 146
            E+ GC+PDRKAR+ML++AL++LER+H
Sbjct: 486  ESYGCTPDRKARQMLQTALMVLERRH 511


>ref|XP_012459102.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Gossypium raimondii]
            gi|763809493|gb|KJB76395.1| hypothetical protein
            B456_012G086600 [Gossypium raimondii]
          Length = 514

 Score =  610 bits (1572), Expect = 0.0
 Identities = 293/446 (65%), Positives = 370/446 (82%)
 Frame = -3

Query: 1483 SFNGKELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRT 1304
            S +G+ELS +++N+ + E C+ G++D+AM L++Q+EA+G  PNS SY  LI  LG+VGRT
Sbjct: 66   SNSGEELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRT 125

Query: 1303 LEADALFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEIL 1124
            LEAD LFQEM+  G +P+IRLFNALLK  LKKGLL +  K LV +D +G+ +N++T+EIL
Sbjct: 126  LEADVLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEIL 185

Query: 1123 IDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAMGM 944
            +DYYVSAGRL DTW+V+ EMK  G   +S+VY K+I +YRDNGMWKKA+G++ E+R  G+
Sbjct: 186  LDYYVSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGI 245

Query: 943  ALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCVKPDVETWNSLIRWHCKFGDCSGALD 764
            +LDR IY+SIIDTFGK+GELGEALEVFEKM+++ + PD+ TWNSLIRWHCK GD + AL 
Sbjct: 246  SLDRQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQ 305

Query: 763  LFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYG 584
            LF  MQEQG YPDPKI M++IS LGE GKWD IKK FENM  +G+Q  GAI+ +LVDIYG
Sbjct: 306  LFTEMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYG 365

Query: 583  QYGKFQNADDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLI 404
            QYG+FQ+A+D I ALK EG   S ++FCVLANAYAQQG CEQTV+VLQLMEAEGIE N+I
Sbjct: 366  QYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELNII 425

Query: 403  MLNMLINAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEM 224
            MLN+LINAF  AGRH EAL++Y HI+ESGISPDVVTYSTLMKAF+ +KKFD+VP+IY EM
Sbjct: 426  MLNVLINAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLMKAFIRAKKFDKVPEIYKEM 485

Query: 223  EASGCSPDRKAREMLKSALLILERKH 146
            E+ GC+PDRKAR+ML++AL++LER+H
Sbjct: 486  ESYGCTPDRKARQMLQTALMVLERRH 511