BLASTX nr result
ID: Rehmannia27_contig00035069
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00035069
(5733 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera] 682 0.0
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 664 0.0
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 654 0.0
gb|KYP40999.1| Retrovirus-related Pol polyprotein from transposo... 630 0.0
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo... 546 0.0
ref|XP_010683397.1| PREDICTED: uncharacterized protein LOC104898... 598 0.0
gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposo... 439 0.0
gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposo... 462 0.0
gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposo... 606 0.0
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera] 481 0.0
gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposo... 427 0.0
gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposo... 598 0.0
emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera] 588 0.0
gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposo... 582 e-180
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 406 e-178
gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposo... 402 e-177
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera] 313 e-176
gb|KYP43329.1| Retrovirus-related Pol polyprotein from transposo... 301 e-171
gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposo... 558 e-167
emb|CAN81715.1| hypothetical protein VITISV_032902 [Vitis vinifera] 311 e-166
>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
Length = 1059
Score = 682 bits (1759), Expect = 0.0
Identities = 421/1066 (39%), Positives = 584/1066 (54%), Gaps = 34/1066 (3%)
Frame = -1
Query: 3099 AGDPLQLHGSDHPGMVLVTNQLNGNNYLPWRRSMLIALGAKTKLGFINGKLPKPDETSED 2920
A +P LH SDHPGMVLV+ LNG+NY W R+M I+L AK+KLGFI+G P T +
Sbjct: 14 AANPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTMPSATDKP 73
Query: 2919 FE--KWQKTDFMVISWLLNSISRDIVDAFIYAQTSKELWDELEQRFGQCNGP*LYQLQRE 2746
E W+K + M++SW+LNS+S+D+ D+ I++ T++E+W++L F Q N P ++Q++R+
Sbjct: 74 BEHASWKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLRDHFSQSNAPRIFQIERD 133
Query: 2745 IASITQGNNTVIAYFTRLKRLWDE---YHSLVPMPHCTCDAGKQWCDNDANVKLIQFLMG 2575
IA +TQ TV AY+TRLK+LWDE Y+ V C+C A + +L+QFLMG
Sbjct: 134 IACLTQDQMTVXAYYTRLKKLWDELGSYNDTV----CSCGADHK------RRRLMQFLMG 183
Query: 2574 LNESFEQARSQVLMMDPLPDVNKAYSMILRIERQRSVHQVFPEVLDNAAMLTHTXXXXXX 2395
LNES+ R Q+L+M+PLPDV KAYS I++ +QRS+ + E +N+AM+
Sbjct: 184 LNESYNAIRGQILLMNPLPDVAKAYSSIVQEXKQRSLGAI-RETTENSAMVVQRAEPMAL 242
Query: 2394 XXXXXXXXXXXXGMRGRGVPHRTREEKSK-LKCSYCHFNGHEAHECFKLHGYPDWYKQFK 2218
G+G R+ K L C+YC + H C+KL+GYP + +
Sbjct: 243 XVRX-----------GQGSSSRSNPSNRKSLHCTYCDRDHHVRETCWKLNGYPPEHPKHA 291
Query: 2217 DQR-----------NAVVANMTNVEVPKEESQTVKKESNPDIAGLIQSEIAKYMATLGTG 2071
R N+ ++ NV+ + V +E GL +I + ++ +
Sbjct: 292 SNRSNHGSTHFKRNNSHQSSANNVK-----ERPVMQEVPSMTNGLSDLQIQQILSIMQGK 346
Query: 2070 NVDNGANFAHFAGYTGIDASQFALSTFEPIGSGS*ILDTGASKHMCISPSLLTDLTPIIS 1891
N A +G+ + L I+D+GA+ H+ SP+LL +
Sbjct: 347 GTTQSTNPKANAAASGLLQTLLHLHRL--------IIDSGATDHITSSPTLLVNSRKNTF 398
Query: 1890 PITVFLPDGTSKSVTHTGTARLSENLILTDVLLVPSFKYNLLSISQLTHTSNFKCVFFPS 1711
V +P G +T G L+ L +VL VPSFK +L+S+S++T N FFP
Sbjct: 399 LPPVAMPSGEQAPITSIGNLPLNSAATLKNVLGVPSFKVDLMSVSRVTKDLNCSVTFFPH 458
Query: 1710 HCVLQDLKTERVIATGKAVGKLYVLTT--SPDPYCSSFSKFHIPCTSSSFLFTCNSVLDL 1537
C+LQDL T I G+ LY L S P + S C S S T ++ L
Sbjct: 459 WCILQDLTTRTTIGLGEQRDGLYYLVALASEKPKTQTPSXXATSCRSPSSQVTSSTAL-- 516
Query: 1536 WHKRLGHASSGTLSHLHFLKPFLNNCNQTQLKDCDICHLSKQHRQPFPLRTECAGSVFEL 1357
WH RLGH SS S L F+ L N CD+C L+KQ R PF + + + FEL
Sbjct: 517 WHXRLGHLSS---SRLDFMAKHLLNFPFQSNNACDVCXLAKQRRLPFSVSSISSVRPFEL 573
Query: 1356 IHLDVWGPFHSGNLFSNTPYFLTLVDDHSRCTWTYLMSHKSQVPSLLEKFILMIKV*FDI 1177
IH D WGP+ +L S FLT+VDD+SR TW + M HKS+ LL KF ++ F +
Sbjct: 574 IHCDXWGPYKIASL-SGAKXFLTIVDDYSRFTWVFFMHHKSETQHLLVKFFSFVQTQFHV 632
Query: 1176 SIKAFRSDNGREFINQWCSELFKSHGILHQRSCAYTPQQNGVVERKHRHLLDTARALLFQ 997
SI R DNG EF + E FK G +Q SC YT QQNGVVERKHRH+L++ RA FQ
Sbjct: 633 SIANIRVDNGGEFFSM--REFFKQKGTTYQHSCVYTSQQNGVVERKHRHILESTRAFRFQ 690
Query: 996 SKLPIDFWPFSLLTTTYLINRLPSSLLHWKSPYEVLYGKAPDYTLLKPFGCTAFATNI-F 820
+ LP+ FW + T ++INRLP+ LL ++P+E LYGK P Y+ ++ FGC A+ATN+
Sbjct: 691 AHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFERLYGKLPSYSHIRVFGCLAYATNVHV 750
Query: 819 PHKGKFDPRAHKCIFLGYEIGMKGYRLYNLTTKKLLVTREVHFLEHEFP--SI-SPSPNT 649
PH KF PRA +CIFLGY +G K Y+LY+L T ++ +R+V F E FP SI SPS N+
Sbjct: 751 PH--KFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHETIFPYESIPSPSSNS 808
Query: 648 DTPLPHAXXXXXXXXXXXXSP--------PHXXXXXXXXXXXXXSLP-IALRKPSRPSKL 496
D +P + P P P LR+ RP
Sbjct: 809 DPVIPLSISDLSPPVPQPSPPEPISPIQQPSLPNSVSTQPSPASPPPEPILRRSQRPHHP 868
Query: 495 PAKLQDYVV--YTTVDQLPPSVLTTQTTGHVSSYSISTFPYYISPCFSPSYVAFLANVSK 322
P L+DYV T+ + L P + Q + + Y + F Y +SP + +F VS+
Sbjct: 869 PMALRDYVCNQVTSPNHLLPLSSSPQKS---TCYPLCNFVSYHH--YSPQHRSFTTAVSQ 923
Query: 321 IQEPSTYAQAKCDPQWVEAMDRELEALEKNQTWEVTDLPPGKKAIGCKWVYKVKLNPDGI 142
EP++YA+A W EAM EL ALE N TW +T LPPGKK IGC+WVYK+K + DG
Sbjct: 924 DIEPTSYAEAASHSHWQEAMQSELAALEANHTWSLTSLPPGKKPIGCRWVYKIKRHSDGT 983
Query: 141 VERFKARLVAKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATLKGW 4
+ERFK RLVAKGY Q G+DY D+FSP AK++TVR L+A+A + W
Sbjct: 984 IERFKDRLVAKGYTQLEGIDYHDTFSPTAKMITVRCLLALAAAQNW 1029
Score = 271 bits (693), Expect(2) = 1e-76
Identities = 151/338 (44%), Positives = 206/338 (60%), Gaps = 21/338 (6%)
Frame = -1
Query: 5733 YTPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYE 5554
YT QQNGVVERKHRH+L++ RA FQ+ LP+ FW + TA ++INRLP LL ++P+E
Sbjct: 665 YTSQQNGVVERKHRHILESTRAFRFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFE 724
Query: 5553 ILYGKAPDYTLLKPFGCAAFATNIH-PHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKK 5377
LYGK P Y+ ++ FGC A+ATN+H PH KF PRA +C+F+GY +G K Y+LY+L T +
Sbjct: 725 RLYGKLPSYSHIRVFGCLAYATNVHVPH--KFAPRAKRCIFLGYPVGQKAYKLYDLDTHQ 782
Query: 5376 VIITREVYFLESEFPSVSLPHATDTPLPIPPSFDSSDSASIPVSDPP--------ISTPL 5221
+ +R+V F E+ FP S+P + P+ P S S +P PP S P
Sbjct: 783 MFTSRDVVFHETIFPYESIPSPSSNSDPVIPLSISDLSPPVPQPSPPEPISPIQQPSLPN 842
Query: 5220 AFST----------PIAIRKPHRSSKLPAKFQDYVV--YTAVDQLPPGTITPHATGCAPS 5077
+ ST PI +R+ R P +DYV T+ + L P + +P + C
Sbjct: 843 SVSTQPSPASPPPEPI-LRRSQRPHHPPMALRDYVCNQVTSPNHLLPLSSSPQKSTC--- 898
Query: 5076 YPLSTFPYYISPCFSASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKNQTW 4897
YPL F Y +S + +F VS+ EPT+Y++A + +HW EAM EL ALE N TW
Sbjct: 899 YPLCNFVSYHH--YSPQHRSFTTAVSQDIEPTSYAEAASHSHWQEAMQSELAALEANHTW 956
Query: 4896 VVTDLPPGKKAIGCKWVYKVKLNLDGTVERFKARLVAR 4783
+T LPPGKK IGC+WVYK+K + DGT+ERFK RLVA+
Sbjct: 957 SLTSLPPGKKPIGCRWVYKIKRHSDGTIERFKDRLVAK 994
Score = 47.8 bits (112), Expect(2) = 1e-76
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRW 4679
+KGY Q G+DY D+FSP AK++TVR L+A+A W
Sbjct: 993 AKGYTQLEGIDYHDTFSPTAKMITVRCLLALAAAQNW 1029
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 664 bits (1713), Expect = 0.0
Identities = 399/1086 (36%), Positives = 559/1086 (51%), Gaps = 57/1086 (5%)
Frame = -1
Query: 3090 PLQLHGSDHPGMVLVTNQLNGNNYLPWRRSMLIALGAKTKLGFINGKLPKPDETSEDF-- 2917
PL +H SD PG VLV +LNG NY W ++++ AL K K+GF++G + +P + E F
Sbjct: 302 PLYIHHSDQPGHVLVPIKLNGVNYQSWSKAVIHALTTKKKIGFVDGTVEEPSQEDEPFMF 361
Query: 2916 EKWQKTDFMVISWLLNSISRDIVDAFIYAQTSKELWDELEQRFGQCNGP*LYQLQREIAS 2737
E+W + + M++SWL +++ DI + I+A+T++E+W +L +F Q N P ++Q+Q+ IA+
Sbjct: 362 EQWNQCNSMILSWLTHAVESDIAEGIIHAKTAREVWVDLRDQFSQKNAPAVFQIQKSIAT 421
Query: 2736 ITQGNNTVIAYFTRLKRLWDEYHSLVPMPHCTCDAGKQWCDNDANVKLIQFLMGLNESFE 2557
++QG TV AYFT++K LWDE + TC+ + + +L+QFLMGLNES++
Sbjct: 422 MSQGTMTVAAYFTKIKALWDELETY--RSPLTCNQRQAHLEQREEDRLMQFLMGLNESYK 479
Query: 2556 QARSQVLMMDPLPDVNKAYSMILRIERQRSVHQVFPEVLDNAAMLTHTXXXXXXXXXXXX 2377
RS +LMM PLP+V +AYS+I++ E QR V E AA +
Sbjct: 480 AVRSNILMMSPLPNVRQAYSLIVQEEMQRQVSSEPTENFSIAAAVPGKGGNPRQKMCDHC 539
Query: 2376 XXXXXXGMRGRGVPHRTREEKSKLKCSYCHFNGHEAHECFKLHGYPDWYKQFKDQRNAVV 2197
R + K C +C GH C +G + QF+ QR
Sbjct: 540 NRSGHTIDECRTL---------KFHCKFCDKRGHTEDRCRLKNGSNNKTGQFRGQRPFGR 590
Query: 2196 ANMTNVEVPKEESQTVKKESNPDIAGLIQSEIAKYMATLGTGNVDNGANFAHFAGYTGID 2017
N + + + + S+ + G +I + + N N N +A G
Sbjct: 591 GNQPSANATESQEMS-DSTSSSTVQGFTTEQIQQLAQAIRALNHSNSGNIDAYANAAG-- 647
Query: 2016 ASQFALSTFEPIGSGS*ILDTGASKHMCISPSLLTDLTPIISPITVFLPDGTSKSVTHTG 1837
A+ H+ SL TDL P + TV LP+G + +THTG
Sbjct: 648 ----------------------ATDHIVSHMSLFTDLKPS-NVTTVNLPNGVASPITHTG 684
Query: 1836 TARLSENLILTDVLLVPSFKYNLLSISQLTHTSNFKCVFFPSHCVLQDLKTERVIATGKA 1657
T L L DVL VPSF NL+S S+L N +FFP +C+LQDL + ++I +GK
Sbjct: 685 TVIFDSQLTLKDVLCVPSFNLNLISASKLAKDQNCYIIFFPDYCILQDLVSGKMIGSGKQ 744
Query: 1656 VGKLYVLTTSPDPYCSSFSKFHIPCTSSSFLFTCNSVLDLWHKRLGHASSGTLSHLHFLK 1477
G LY + P T+ S +F + DLWH RLGH S S L
Sbjct: 745 RGGLYYMH---------------PSTNKSVVFHVSQPSDLWHLRLGHPS---FSRFKLLS 786
Query: 1476 PFLNNCNQTQLKDCDICHLSKQHRQPFPLRTECAGSVFELIHLDVWGPFHSGNLFSNTPY 1297
L + ++ C IC +KQ R PFP + F L+H DVWGP H + + Y
Sbjct: 787 RLLPDIHKEIGNHCPICPQAKQTRLPFPKSSITTKFPFSLLHCDVWGP-HKIPAHTGSRY 845
Query: 1296 FLTLVDDHSRCTWTYLMSHKSQVPSLLEKFILMIKV*FDISIKAFRSDNGREFINQWCSE 1117
FLT+VDD SRCTW +LM HKS+ SLL F+ +K F ++ R DNG EFI
Sbjct: 846 FLTIVDDFSRCTWIFLMHHKSETQSLLTNFVQFVKTQFHTDVQTVRMDNGTEFIP--LRI 903
Query: 1116 LFKSHGILHQRSCAYTPQQNGVVERKHRHLLDTARALLFQSKLPIDFWPFSLLTTTYLIN 937
++ GI Q SC YTPQQNGVVERKHRH+L+ AR+L+FQS +P++FW +LT YLIN
Sbjct: 904 FLQNKGIELQTSCIYTPQQNGVVERKHRHILNVARSLMFQSNVPLEFWGECVLTAVYLIN 963
Query: 936 RLPSSLLHWKSPYEVLYGKAPDYTLLKPFGCTAFATNIFPHKGKFDPRAHKCIFLGYEIG 757
R+P+ LL KSP+EVLY + P T L+ FGC + TN+ P K KFDPRA C+FLGY G
Sbjct: 964 RIPTPLLSNKSPFEVLYNRPPSLTHLRVFGCECYVTNVHP-KQKFDPRASICVFLGYPHG 1022
Query: 756 MKGYRLYNLTTKKLLVTREVHFLEHEFP-------------------------------- 673
KGY++ +L T+K+ V+R+V F E+ FP
Sbjct: 1023 KKGYKVLDLQTQKISVSRDVFFRENIFPFHSSSSQSQQHSPSLPLPLPISFDSTPQPISL 1082
Query: 672 -----------------SISPSPNTDTPLP------HAXXXXXXXXXXXXSPPHXXXXXX 562
S PS NTD P P + SPP
Sbjct: 1083 PRFSPSSTPPLSHHNPVSSPPSSNTDVPEPLSHESVASPLPSSPSPSSLSSPPSVPLVPS 1142
Query: 561 XXXXXXXSLPIALRKPSRPSKLPAKLQDYVVYTTVDQLPPSVLTTQTTGHVSSYSISTFP 382
+ LR+ +R + PA DYV+ ++ + Q T + S +S F
Sbjct: 1143 NTSAPSPTHEPPLRRSTRHIQPPAWHHDYVMSAQLNHSSTQSSSRQGTRYPLSSHLSFFR 1202
Query: 381 YYISPCFSPSYVAFLANVSKIQEPSTYAQAKCDPQWVEAMDRELEALEKNQTWEVTDLPP 202
FSP + AFLA ++ EPS++ QA CDP+W +AM EL+ALE+N TWE+ LPP
Sbjct: 1203 ------FSPHHRAFLALLTAQTEPSSFEQADCDPRWRQAMSTELQALERNNTWEMVPLPP 1256
Query: 201 GKKAIGCKWVYKVKLNPDGIVERFKARLVAKGYHQEYGVDYVDSFSPVAKLVTVRFLIAI 22
G K IGC+WVYK+K + DG +ER+KARLVAKGY Q G+DY ++FSP AKL T+R L+ +
Sbjct: 1257 GHKPIGCRWVYKIKYHSDGTIERYKARLVAKGYTQVAGIDYQETFSPTAKLTTLRCLLTV 1316
Query: 21 ATLKGW 4
A + W
Sbjct: 1317 AASRNW 1322
Score = 276 bits (707), Expect(2) = e-145
Identities = 136/290 (46%), Positives = 188/290 (64%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMS 4610
+KGY Q G+DY ++FSP AKL T+R L+ +A W +HQ+D++NAFLHG L E++YM+
Sbjct: 1286 AKGYTQVAGIDYQETFSPTAKLTTLRCLLTVAASRNWYIHQLDVHNAFLHGNLQEEVYMT 1345
Query: 4609 LPEGYSAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTPSS 4430
P G Q + VC L++S+YGLKQASR W + F + + G+ QS D+ LFTK +
Sbjct: 1346 PPPGLRRQGENLVCRLRKSIYGLKQASRNWFSTFTATVKSAGYIQSKADYSLFTKSQGNK 1405
Query: 4429 FLALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQR 4250
F A++IYVDD+LLTG++L +I +K +L + F IKDLG KYFLG+E R+ G ++ QR
Sbjct: 1406 FTAILIYVDDILLTGNDLHEIKMLKTHLLKRFFIKDLGELKYFLGIEFSRSKKGIFMSQR 1465
Query: 4249 KYILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPDIT 4070
KY LDIL GL G KP P LKL G L +P L +TRPDI
Sbjct: 1466 KYTLDILQDTGLTGVKPEKFPMEQNLKLTNEDGELLHDPSRYRRLVGRLIYLTVTRPDIV 1525
Query: 4069 FSVQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAYC 3920
+SV+ LSQFMN+P HW+AA+ +L Y+KG P QGL ++++L L+A+C
Sbjct: 1526 YSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSENNLTLSAFC 1575
Score = 271 bits (692), Expect(2) = e-145
Identities = 155/377 (41%), Positives = 216/377 (57%), Gaps = 60/377 (15%)
Frame = -1
Query: 5733 YTPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYE 5554
YTPQQNGVVERKHRH+L+ AR+L+FQS +P++FW +LTA YLINR+P LL KSP+E
Sbjct: 918 YTPQQNGVVERKHRHILNVARSLMFQSNVPLEFWGECVLTAVYLINRIPTPLLSNKSPFE 977
Query: 5553 ILYGKAPDYTLLKPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKKV 5374
+LY + P T L+ FGC + TN+HP K KFDPRA C+F+GY G KGY++ +L T+K+
Sbjct: 978 VLYNRPPSLTHLRVFGCECYVTNVHP-KQKFDPRASICVFLGYPHGKKGYKVLDLQTQKI 1036
Query: 5373 IITREVYFLESEFP-----SVSLPHATDTPLPIPPSFDSSD----------------SAS 5257
++R+V+F E+ FP S S H+ PLP+P SFDS+ S
Sbjct: 1037 SVSRDVFFRENIFPFHSSSSQSQQHSPSLPLPLPISFDSTPQPISLPRFSPSSTPPLSHH 1096
Query: 5256 IPVSDPPIS---------------------TPLAFSTPIAI------------------R 5194
PVS PP S +P + S+P ++ R
Sbjct: 1097 NPVSSPPSSNTDVPEPLSHESVASPLPSSPSPSSLSSPPSVPLVPSNTSAPSPTHEPPLR 1156
Query: 5193 KPHRSSKLPAKFQDYVVYTAVDQLPPGTITPHATGCAPSYPLSTFPYYISPCFSASYVAF 5014
+ R + PA DYV+ ++ + T ++ YPLS+ + FS + AF
Sbjct: 1157 RSTRHIQPPAWHHDYVMSAQLNH----SSTQSSSRQGTRYPLSSHLSFFR--FSPHHRAF 1210
Query: 5013 LANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKNQTWVVTDLPPGKKAIGCKWVYKVK 4834
LA ++ EP+++ QA D W +AM EL+ALE+N TW + LPPG K IGC+WVYK+K
Sbjct: 1211 LALLTAQTEPSSFEQADCDPRWRQAMSTELQALERNNTWEMVPLPPGHKPIGCRWVYKIK 1270
Query: 4833 LNLDGTVERFKARLVAR 4783
+ DGT+ER+KARLVA+
Sbjct: 1271 YHSDGTIERYKARLVAK 1287
Score = 204 bits (518), Expect = 6e-49
Identities = 96/161 (59%), Positives = 121/161 (75%), Gaps = 5/161 (3%)
Frame = -2
Query: 3947 LFLASH-----SILCDADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEY 3783
LFL S S CD+DW C +RRSV+G+C+FLGSSL+SWK+KKQT +SRSSAEAEY
Sbjct: 1561 LFLPSENNLTLSAFCDSDWGGCRMSRRSVSGYCVFLGSSLISWKSKKQTNVSRSSAEAEY 1620
Query: 3782 RALSATVCELLWLSYLAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLV 3603
RA++ T EL WL Y+ D + + KP PL CDNQAALYI ANPVFHERTKH+EIDCH+V
Sbjct: 1621 RAMANTCLELTWLRYILKDLKVELDKPAPLFCDNQAALYIAANPVFHERTKHIEIDCHIV 1680
Query: 3602 RDQFKAGLVSP*KIGSSLQLADLFTKALGPGIFTTLLSKLG 3480
R++ +AG++ P + + +QLAD+FTKALG F L +KLG
Sbjct: 1681 REKLQAGVIRPCYVSTKMQLADVFTKALGREQFEFLCTKLG 1721
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 654 bits (1686), Expect = 0.0
Identities = 402/1084 (37%), Positives = 561/1084 (51%), Gaps = 55/1084 (5%)
Frame = -1
Query: 3090 PLQLHGSDHPGMVLVTNQLNGNNYLPWRRSMLIALGAKTKLGFINGKLPKPDETSEDFEK 2911
PL LH SD PG VLV+ L +NY W +SM +AL K K GF++G L +P + ++
Sbjct: 31 PLFLHHSDQPGAVLVSQPLMEDNYTTWVQSMDMALTIKNKKGFVDGTLNRPTHNPNEQQQ 90
Query: 2910 WQKTDFMVISWLLNSISRDIVDAFIYAQTSKELWDELEQRFGQCNGP*LYQLQREIASIT 2731
W + + +V +WLL +IS++I ++ I+ + +K +W EL++RF N L+ ++ I
Sbjct: 91 WDRCNILVKTWLLGAISKEISNSVIHCKDAKTMWLELQERFSHTNTVQLFNIENAIHECA 150
Query: 2730 QGNNTVIAYFTRLKRLWDEYHSLVPMPHCTCDAGKQWCDNDANVKLIQFLMGLNESFEQA 2551
QG TV ++FT+LK LWDE +L P CTC + K ++FLMGL +++
Sbjct: 151 QGTGTVTSFFTKLKGLWDEKDALCGFPPCTCATAAEVKTYMETQKTMKFLMGLGDNYATV 210
Query: 2550 RSQVLMMDPLPDVNKAYSMILRIERQRSVHQVFPEVLDNAAMLTHTXXXXXXXXXXXXXX 2371
RS ++ MDPLP VNKAY+M LR E+Q V + A+ +
Sbjct: 211 RSNIIGMDPLPTVNKAYAMALRHEKQAEASNGKVAVPNEASAFSVRKLDQDPNTTEREVK 270
Query: 2370 XXXXGMRGRGVPHRTREEKSKLKCSYCHFNGHEAHECFKLHGYPDWYKQFKDQRNAVVAN 2191
M H T+ ++ LKC+YC GH C + + +A N
Sbjct: 271 CEKCNMTN----HSTKNCRAHLKCTYCGGKGHTYDYCRRRKNTMGGGQGRSKVNHAATLN 326
Query: 2190 -----MTNVEVPKEESQT-------VKKESNPDIAGLIQSEIAKYMATLGTGNVDNGANF 2047
+TN + + E Q +K + G E+ V N N+
Sbjct: 327 EGKEDVTNFPLSQSECQQMMGLLSKIKTAATSHSDGHQMLEMLHATKQASANLVGNVPNY 386
Query: 2046 AHFAGYTGIDASQFALSTFEPIGSGS*ILDTGASKHMCISPSLLTDLTPIISPITVFLPD 1867
+G FALS I ILD+GAS H+ S LT P+ + I V LPD
Sbjct: 387 EELSGRV------FALS--RDIKDTMWILDSGASDHIVCDSSFLTSFQPVHNRI-VKLPD 437
Query: 1866 GTSKSVTHTGTARLSENLILTDVLLVPSFKYNLLSISQLTHTSNFKCVFFPSHCVLQDLK 1687
GTS V+H GT S +L +VL VP F NL+SIS+L S + +F C +QDL+
Sbjct: 438 GTSAHVSHIGTVSFSAQFVLHNVLCVPLFYLNLISISKLAFDSFYVTIFLRQVCFIQDLQ 497
Query: 1686 TERVIATGKAVGKLYVLTTSPDPYCSSFSKFHIPCTSSSFLFTCNSV----LDLWHKRLG 1519
+ ++I G T S YC + + TCN V DLWH+RLG
Sbjct: 498 SGKMIGMG---------TESEGLYCLNLPRKG----------TCNVVNTKTQDLWHQRLG 538
Query: 1518 HASSGTLSHLHFLKPFLNNCNQTQLKDCDICHLSKQHRQPFPLRTECAGSVFELIHLDVW 1339
H SS + L PFL N + C IC L+K R PFPL + S F+LIH+D+W
Sbjct: 539 HPSS----KVSVLFPFLQN-KTLDVSTCSICPLAKHTRTPFPLSVSSSDSCFDLIHVDIW 593
Query: 1338 GPFHSGNLFSNTPYFLTLVDDHSRCTWTYLMSHKSQVPSLLEKFILMIKV*FDISIKAFR 1159
G +H +L S YFLT+VDDHSR TW YLM HKS+ SLL F+ ++ F +K R
Sbjct: 594 GGYHVPSL-SGAQYFLTIVDDHSRSTWVYLMHHKSEARSLLVHFVNLVANQFGSQVKIVR 652
Query: 1158 SDNGREFINQWCSELFKSHGILHQRSCAYTPQQNGVVERKHRHLLDTARALLFQSKLPID 979
SDNG EF + ++ + S GILHQ SC TPQQNGVVERKHRHLL+ ARALLFQS LP
Sbjct: 653 SDNGPEFKH---TQFYSSRGILHQTSCINTPQQNGVVERKHRHLLNVARALLFQSHLPKP 709
Query: 978 FWPFSLLTTTYLINRLPSSLLHWKSPYEVLYGKAPDYTLLKPFGCTAFATNIFPHKGKFD 799
FW ++LT YLINR P+ LL K+P+E L+ K+P+Y+ L+ FGC F + KFD
Sbjct: 710 FWGDAILTAAYLINRTPTPLLQGKTPFEKLFHKSPNYSHLRVFGCRCFVSTHPLRPSKFD 769
Query: 798 PRAHKCIFLGYEIGMKGYRLYNLTTKKLLVTREVHFLEHEFP------SISPSPNTDTPL 637
PR+ + +F+GY G KGY++Y+L KK L++R+V F E EFP + SPS +T P
Sbjct: 770 PRSIESVFIGYPHGQKGYKVYSLKDKKXLISRDVTFFETEFPYQNXLSTTSPSLDTFFPS 829
Query: 636 --------------------------------PHAXXXXXXXXXXXXSPPHXXXXXXXXX 553
P P
Sbjct: 830 LPQTPDIDDDHISFNHSGSNLQPSATSSVDXHPQPTLDNSHSSSHVDPPSSPPSLNTSPP 889
Query: 552 XXXXSLPIALRKPSRPSKLPAKLQDYVVYTTVDQLPPSVLTTQTTGHVSS-YSISTFPYY 376
P R+ SRP+K P LQD+ + + P +T H + +S+S Y
Sbjct: 890 VISQPSPSQPRRSSRPTKTPTTLQDFHIEAALPSRPVPPSSTSEVAHSGTIHSLSQVLSY 949
Query: 375 ISPCFSPSYVAFLANVSKIQEPSTYAQAKCDPQWVEAMDRELEALEKNQTWEVTDLPPGK 196
SP + AF ++ +EP +++QA D +W EAM+ E++AL+ N+TW + LP K
Sbjct: 950 DR--LSPMHKAFTVKITLAKEPRSFSQAVLDSRWREAMNTEIQALQANKTWSLVPLPSHK 1007
Query: 195 KAIGCKWVYKVKLNPDGIVERFKARLVAKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIAT 16
K IGCKWVYK+K NPDG +ER+KARLVAKG+ Q G+DY ++F+PVAKL TVR L+++A+
Sbjct: 1008 KPIGCKWVYKIKYNPDGTIERYKARLVAKGFSQVEGIDYRETFAPVAKLTTVRVLLSLAS 1067
Query: 15 LKGW 4
++GW
Sbjct: 1068 IQGW 1071
Score = 268 bits (686), Expect(3) = 0.0
Identities = 132/290 (45%), Positives = 185/290 (63%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMS 4610
+KG+ Q G+DY ++F+PVAKL TVR L+++A++ W LHQ+D+NNAFL+G L ED+YM
Sbjct: 1035 AKGFSQVEGIDYRETFAPVAKLTTVRVLLSLASIQGWHLHQLDVNNAFLNGDLYEDVYMQ 1094
Query: 4609 LPEGYSAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTPSS 4430
LP G+ + + +VC L +SLYGLKQASRQW + L A GF+QS D+ LF + T
Sbjct: 1095 LPPGFGRKGEHRVCKLHKSLYGLKQASRQWFLKLSSALKAAGFKQSWSDYSLFXRNTQGR 1154
Query: 4429 FLALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQR 4250
F L++YVDDV+L G++L+DI+ K +L F +KD+G +YFLG+E+ R+ G L QR
Sbjct: 1155 FTTLLVYVDDVILAGNSLEDIIETKQFLASHFKLKDMGQLRYFLGIEVARSKQGIVLCQR 1214
Query: 4249 KYILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPDIT 4070
KY L++L G LG KP+ P L L G G+ L + L +TRPD+
Sbjct: 1215 KYALELLEDAGFLGAKPSRFPVEQSLTLTRGDGAELKDASQYRRLVGRLIYLTITRPDLV 1274
Query: 4069 FSVQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAYC 3920
++V LSQFM++P H DAA +L Y+K P QG+ + L LTAYC
Sbjct: 1275 YAVHILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYC 1324
Score = 250 bits (638), Expect(3) = 0.0
Identities = 152/362 (41%), Positives = 203/362 (56%), Gaps = 46/362 (12%)
Frame = -1
Query: 5730 TPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYEI 5551
TPQQNGVVERKHRHLL+ ARALLFQS LP FW ++LTA YLINR P LL K+P+E
Sbjct: 679 TPQQNGVVERKHRHLLNVARALLFQSHLPKPFWGDAILTAAYLINRTPTPLLQGKTPFEK 738
Query: 5550 LYGKAPDYTLLKPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKKVI 5371
L+ K+P+Y+ L+ FGC F + KFDPR+ + +FIGY G KGY++Y+L KK +
Sbjct: 739 LFHKSPNYSHLRVFGCRCFVSTHPLRPSKFDPRSIESVFIGYPHGQKGYKVYSLKDKKXL 798
Query: 5370 ITREVYFLESEFP--------SVSL----------------------------PHATDTP 5299
I+R+V F E+EFP S SL P AT +
Sbjct: 799 ISRDVTFFETEFPYQNXLSTTSPSLDTFFPSLPQTPDIDDDHISFNHSGSNLQPSATSSV 858
Query: 5298 LPIP-PSFDSSDSASIPVSDPPISTPLAFSTPIAIRKP--------HRSSKLPAKFQDYV 5146
P P+ D+S S+S DPP S P ++P I +P R +K P QD+
Sbjct: 859 DXHPQPTLDNSHSSS--HVDPPSSPPSLNTSPPVISQPSPSQPRRSSRPTKTPTTLQDFH 916
Query: 5145 VYTAVDQLP-PGTITPHATGCAPSYPLSTFPYYISPCFSASYVAFLANVSKIQEPTTYSQ 4969
+ A+ P P + T + LS Y S + AF ++ +EP ++SQ
Sbjct: 917 IEAALPSRPVPPSSTSEVAHSGTIHSLSQVLSY--DRLSPMHKAFTVKITLAKEPRSFSQ 974
Query: 4968 AKNDAHWVEAMDRELEALEKNQTWVVTDLPPGKKAIGCKWVYKVKLNLDGTVERFKARLV 4789
A D+ W EAM+ E++AL+ N+TW + LP KK IGCKWVYK+K N DGT+ER+KARLV
Sbjct: 975 AVLDSRWREAMNTEIQALQANKTWSLVPLPSHKKPIGCKWVYKIKYNPDGTIERYKARLV 1034
Query: 4788 AR 4783
A+
Sbjct: 1035 AK 1036
Score = 188 bits (477), Expect(3) = 0.0
Identities = 87/152 (57%), Positives = 114/152 (75%)
Frame = -2
Query: 3920 CDADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLS 3741
CDADWA C TRRS TG+CIF G++ +SWKTKKQ T+SRSSAEAEYR+++ T CE+ WL
Sbjct: 1324 CDADWARCKDTRRSTTGYCIFFGNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLR 1383
Query: 3740 YLAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KI 3561
L D +++ + L CDNQAA++I +NPVFHERTKH+E+DCH+VR++ + GLV I
Sbjct: 1384 SLLADLNVNHAHAVKLFCDNQAAIHIASNPVFHERTKHIEMDCHVVREKVQRGLVKTMHI 1443
Query: 3560 GSSLQLADLFTKALGPGIFTTLLSKLGMQDLH 3465
+ Q ADLFTK L F+TLLSKLG+ ++H
Sbjct: 1444 RTQEQPADLFTKPLSSKQFSTLLSKLGVINIH 1475
>gb|KYP40999.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1029
Score = 630 bits (1624), Expect = 0.0
Identities = 385/1044 (36%), Positives = 564/1044 (54%), Gaps = 18/1044 (1%)
Frame = -1
Query: 3081 LHGSDHPGMVLVTNQLNGNNYLPWRRSMLIALGAKTKLGFINGKLPKPDETSEDFEKWQK 2902
+H +++P ++LV+ L+G NY W RSM +AL K K FI+G L KP DF W++
Sbjct: 12 IHPNENPSLILVSPVLDGPNYHSWSRSMAMALEMKNKSSFIDGTLKKPVSDDPDFSMWKR 71
Query: 2901 TDFMVISWLLNSISRDIVDAFIYAQTSKELWDELEQRFGQCNGP*LYQLQREIASITQGN 2722
+ +V+SWL++S+S +I + IY T+ + W EL+QRF Q + + QL +I S+ QG+
Sbjct: 72 CNTLVLSWLIHSVSPEIAHSIIYIDTAFDAWKELKQRFSQGDHVRISQLLTDIHSLKQGD 131
Query: 2721 NTVIAYFTRLKRLWDEYHSLVPMPHCTCD------AGKQWCDNDANVKLIQFLMGLNESF 2560
++V YFT+ K LW+EY + P+ C D A K++ DND+ ++ FL GLN+++
Sbjct: 132 SSVTTYFTKYKILWEEYCNFRPLTPCDSDSCKTHKAVKEYRDNDS---VLCFLQGLNDNY 188
Query: 2559 EQARSQVLMMDPLPDVNKAYSMILRIERQRSVHQVFPEVLDNAAMLTHTXXXXXXXXXXX 2380
RSQ+L++DPLP + K +SM+++ ERQ ++ + PE L + T T
Sbjct: 189 STVRSQILLLDPLPSITKVFSMVVQQERQLNIG-ILPEPL---VLATQTQFPS------- 237
Query: 2379 XXXXXXXGMRGRGVPHRTREEKSKLKCSYCHFNGHEAHECFKLHGYPDWYKQFKDQRNAV 2200
+G +++S C+YC N H CF HG+P Y+ K N V
Sbjct: 238 ---------NSQGKVRFNGKKQSNKHCTYCKKNNHTIETCFFKHGFPPGYRTTKSSSNVV 288
Query: 2199 VANMTNVEVPKEESQTVKKESNPDIAGLIQSEIAKYMATLGTGNVDNGANFAHFAGYTGI 2020
++ + P ++ IQ+ +A +T T + ++ G+
Sbjct: 289 ASSSIDPAAPSLSTEQ------------IQALLALLPSTAPTATT----SVSNLVSSHGV 332
Query: 2019 DASQFALSTFEPIGSGS*ILDTGASKHMCISPSLLTDLTPIISPITVFLPDGTSKSVTHT 1840
AS +L T ILD+GA+ H+ S S + I PI V LP+G +
Sbjct: 333 SASPQSLGTLP----SPWILDSGATDHIISSLSSFSCYKSI-QPIHVSLPNGQHSIAEFS 387
Query: 1839 GTARLSENLILTDVLLVPSFKYNLLSISQLTHTSNFKCVFFPSHCVLQDLKTERVIATGK 1660
GT LS N+ L +VL +P+F NL+S+++LT + + F +CV+Q+ KT R I K
Sbjct: 388 GTVVLSPNISLYNVLYIPNFSVNLISVNKLTSSLSCTLCFSSDNCVIQEHKTLRKIGIAK 447
Query: 1659 AVGKLYVLTTSPDPYCSSFSKFHIPCTSSSFLFTCN-SVLDLWHKRLGHASSGTLSHLHF 1483
A LYV+ SS + F+ ++S FT LWH RLGH S SH+
Sbjct: 448 AQNGLYVMDFLTHKDSSSLATFN----TASVTFTSKIDPSSLWHFRLGHPSGQCYSHIQK 503
Query: 1482 LKPFLNNCNQTQLKDCDICHLSKQHRQPFPLRTECAGSVFELIHLDVWGPFHSGNLFSNT 1303
PF+++ T CD CH SKQ + PF T + +V +LIH+D+WGP+ + ++ +
Sbjct: 504 QYPFVSSSFNT----CDFCHFSKQKKLPFNNSTTISANVLDLIHVDIWGPYATPSVLGHK 559
Query: 1302 PYFLTLVDDHSRCTWTYLMSHKSQVPSLLEKFILMIKV*FDISIKAFRSDNGREFINQWC 1123
YFLT+VDD SR TW LM +K++ L FI + F +IK RSDNG+EF
Sbjct: 560 -YFLTIVDDKSRFTWIRLMQNKNETRQHLLNFITFTETQFHKTIKIIRSDNGQEFN---M 615
Query: 1122 SELFKSHGILHQRSCAYTPQQNGVVERKHRHLLDTARALLFQSKLPIDFWPFSLLTTTYL 943
+L+ S GI+HQ SC TPQQNGVVERKH+H+L+ AR+LL QS LP+ +W F++ +
Sbjct: 616 PQLYASKGIIHQLSCVETPQQNGVVERKHQHILNIARSLLLQSHLPLSYWCFAVKHAVMI 675
Query: 942 INRLPSSLLHWKSPYEVLYGKAPDYTLLKPFGCTAFATNIFPHKGKFDPRAHKCIFLGYE 763
IN LPS LH SP + Y K PD + L+ FG FA+ + H+ KF PRA +C+ LG++
Sbjct: 676 INILPSYKLHNLSPSNIFYNKEPDISHLRVFGSLCFASTLTAHRTKFAPRAKRCLLLGHK 735
Query: 762 IGMKGYRLYNLTTKKLLVTREVHFLEHEFP----SISPSPNTDTPLP-------HAXXXX 616
G+KGY L +L TK++ ++R V F E FP I P+ N D P HA
Sbjct: 736 DGVKGYLLMDLNTKEIFISRNVVFYETIFPYSPSCIPPASNNDLCSPCLPCTTNHADLNP 795
Query: 615 XXXXXXXXSPPHXXXXXXXXXXXXXSLPIALRKPSRPSKLPAKLQDYVVYTTVDQLPPSV 436
H +LP R +R P L+DY P
Sbjct: 796 EASSQHPAQQQHIPVPSNTAENPQTNLP--FRVSTRQRHPPNYLRDYHCNIVNHHAP--- 850
Query: 435 LTTQTTGHVSSYSISTFPYYISPCFSPSYVAFLANVSKIQEPSTYAQAKCDPQWVEAMDR 256
LT T+ +S+S F Y SPSY +F+ +++ EP +Y QA W +AMD+
Sbjct: 851 LTHSTS---VPHSLSAFLSYNR--LSPSYKSFVLSLTSSAEPQSYNQAIRHACWKDAMDK 905
Query: 255 ELEALEKNQTWEVTDLPPGKKAIGCKWVYKVKLNPDGIVERFKARLVAKGYHQEYGVDYV 76
E+ ALE+NQ+W +TDLP GK IGCKW+YK+K DG +ER+KARLVAKGY+Q+ GVD+
Sbjct: 906 EIIALEQNQSWILTDLPQGKHPIGCKWIYKIKHKADGSIERYKARLVAKGYNQQEGVDFF 965
Query: 75 DSFSPVAKLVTVRFLIAIATLKGW 4
D+FSPV K T+R ++AIA +K W
Sbjct: 966 DTFSPVVKHTTIRLILAIAAVKQW 989
Score = 227 bits (579), Expect(2) = 6e-77
Identities = 132/332 (39%), Positives = 184/332 (55%), Gaps = 16/332 (4%)
Frame = -1
Query: 5730 TPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYEI 5551
TPQQNGVVERKH+H+L+ AR+LL QS LP+ +W F++ A +IN LP+ L SP I
Sbjct: 633 TPQQNGVVERKHQHILNIARSLLLQSHLPLSYWCFAVKHAVMIINILPSYKLHNLSPSNI 692
Query: 5550 LYGKAPDYTLLKPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKKVI 5371
Y K PD + L+ FG FA+ + H+ KF PRA +CL +G++ G+KGY L +L TK++
Sbjct: 693 FYNKEPDISHLRVFGSLCFASTLTAHRTKFAPRAKRCLLLGHKDGVKGYLLMDLNTKEIF 752
Query: 5370 ITREVYFLESEFP--SVSLPHATDTPLPIP------------PSFDSSDSASIPVSDPPI 5233
I+R V F E+ FP +P A++ L P P S A P
Sbjct: 753 ISRNVVFYETIFPYSPSCIPPASNNDLCSPCLPCTTNHADLNPEASSQHPAQQQHIPVPS 812
Query: 5232 STPLAFSTPIAIRKPHRSSKLPAKFQDYVVYTAVDQLP--PGTITPHATGCAPSYPLSTF 5059
+T T + R R P +DY P T PH+ SY
Sbjct: 813 NTAENPQTNLPFRVSTRQRHPPNYLRDYHCNIVNHHAPLTHSTSVPHSLSAFLSYNR--- 869
Query: 5058 PYYISPCFSASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKNQTWVVTDLP 4879
S SY +F+ +++ EP +Y+QA A W +AMD+E+ ALE+NQ+W++TDLP
Sbjct: 870 -------LSPSYKSFVLSLTSSAEPQSYNQAIRHACWKDAMDKEIIALEQNQSWILTDLP 922
Query: 4878 PGKKAIGCKWVYKVKLNLDGTVERFKARLVAR 4783
GK IGCKW+YK+K DG++ER+KARLVA+
Sbjct: 923 QGKHPIGCKWIYKIKHKADGSIERYKARLVAK 954
Score = 92.8 bits (229), Expect(2) = 6e-77
Identities = 38/74 (51%), Positives = 58/74 (78%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMS 4610
+KGY+Q+ GVD+ D+FSPV K T+R ++AIA + +W LHQ+D+NNAFLHG L E++YM+
Sbjct: 953 AKGYNQQEGVDFFDTFSPVVKHTTIRLILAIAAVKQWHLHQLDVNNAFLHGDLKEEVYMT 1012
Query: 4609 LPEGYSAQAKGKVC 4568
+P+G+ + K +C
Sbjct: 1013 IPKGFKS-TKSSMC 1025
>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1316
Score = 277 bits (709), Expect(3) = 0.0
Identities = 137/289 (47%), Positives = 192/289 (66%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMS 4610
+KGY Q G+D+ D+FSPVAKL TVR L+++A +N W L Q+D+NNAFLHG L+E++YM
Sbjct: 869 AKGYTQMEGLDFFDTFSPVAKLTTVRLLLSLAAINNWHLKQLDVNNAFLHGDLNEEVYMQ 928
Query: 4609 LPEGYSAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTPSS 4430
LP G + G+VC L+RSLYGLKQASRQW L+ G+ S DH LF K +P++
Sbjct: 929 LPPGLTPSFPGQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLFLKCSPAT 988
Query: 4429 FLALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQR 4250
A++IYVDD++L G++L +I + + L F IKDLG+ KYFLG+E+ R ++G +L QR
Sbjct: 989 TTAILIYVDDIVLAGNDLTEIHHLTSLLHTTFQIKDLGNLKYFLGLEVARNHTGIHLCQR 1048
Query: 4249 KYILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPDIT 4070
KYILD+L+ G+L KP TP + L SG+PL + L TRPDIT
Sbjct: 1049 KYILDLLSDTGMLASKPVSTPMDYSMHLSASSGTPLTDTAAYRRLVGRLIYLTNTRPDIT 1108
Query: 4069 FSVQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAY 3923
++VQQLSQF+++P ++H A +L YLKG P G+ + +SS+ L A+
Sbjct: 1109 YAVQQLSQFVSNPTTAHRQALFRILRYLKGTPGSGIFLSVNSSVQLRAF 1157
Score = 250 bits (638), Expect(3) = 0.0
Identities = 137/325 (42%), Positives = 198/325 (60%), Gaps = 9/325 (2%)
Frame = -1
Query: 5730 TPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYEI 5551
TPQQNG+VERKH+HLL+ R+LLFQ+ LP FW F+L+ AT+LIN +P L SP+E
Sbjct: 560 TPQQNGIVERKHQHLLNVTRSLLFQANLPSIFWCFALMHATFLINCIPTPFLHNISPFEK 619
Query: 5550 LYGKAPDYTLLKPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKKVI 5371
LYG D ++L FGC +++ I H+ K DPRAH C+F+G++ KGY L+NL T ++
Sbjct: 620 LYGHPCDISILCVFGCLCYSSTITSHRTKLDPRAHPCIFLGFKPHTKGYLLFNLHTHGLL 679
Query: 5370 ITREVYFLESEFPSVSLPHATDTPLPIP--------PSFDSSDSASIPVSDPPISTPLAF 5215
++R V F E FPS + PH+ P+P P+F S S+ + SDPP S
Sbjct: 680 VSRNVLFHEDHFPSFTKPHSPSFSSPVPIHYNYVDYPTFPS--SSIVESSDPPTSD--QH 735
Query: 5214 STPIAIRKPHRSSKLPAKFQDY-VVYTAVDQLPPGTITPHATGCAPSYPLSTFPYYISPC 5038
S+P +R+ R + P QD+ +T+ T T H++ +PL +F Y
Sbjct: 736 SSPPPLRRSTRPRRPPTYLQDFHGAFTS-------TSTAHSS-TGIRHPLHSFLSY--DL 785
Query: 5037 FSASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKNQTWVVTDLPPGKKAIG 4858
S S+ ++ ++S + EP +++A W++AM E+ ALE N TWV+T LPP K AIG
Sbjct: 786 LSPSFHHYVFSISSVTEPKNFAEASKSDSWLKAMHEEIFALEANNTWVLTTLPPHKTAIG 845
Query: 4857 CKWVYKVKLNLDGTVERFKARLVAR 4783
C+WVYKVK DG+++R+KARLVA+
Sbjct: 846 CRWVYKVKHKADGSIDRYKARLVAK 870
Score = 201 bits (512), Expect(3) = 0.0
Identities = 94/151 (62%), Positives = 115/151 (76%)
Frame = -2
Query: 3917 DADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLSY 3738
D+DWA CP TRRS+TGF ++LG SL+SWK+KKQ T+SRSS+EAEYRAL+ T CEL WLSY
Sbjct: 1159 DSDWAGCPDTRRSITGFAVYLGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSY 1218
Query: 3737 LAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KIG 3558
L DFHI P L CDNQ+AL I +NPVFHERTKH+EIDCH+VRD+ GL+ +
Sbjct: 1219 LLKDFHIDPISPSILYCDNQSALQIASNPVFHERTKHIEIDCHIVRDKVSTGLLKLLPVS 1278
Query: 3557 SSLQLADLFTKALGPGIFTTLLSKLGMQDLH 3465
SS QLAD+ TK L P +F + SKLGM ++H
Sbjct: 1279 SSQQLADILTKPLSPFVFRSHCSKLGMLNIH 1309
Score = 546 bits (1408), Expect = e-164
Identities = 338/983 (34%), Positives = 504/983 (51%), Gaps = 20/983 (2%)
Frame = -1
Query: 2892 MVISWLLNSISRDIVDAFIYAQTSKELWDELEQRFGQCNGP*LYQLQREIASITQGNNTV 2713
MV+SWL++S+S I + ++ + ++W +L+ R+ Q + + LQ E +S+ QG+ +V
Sbjct: 1 MVVSWLVHSVSPSIRQSILWMDQADDIWKDLKTRYSQGDLLRVSDLQLEASSLKQGDLSV 60
Query: 2712 IAYFTRLKRLWDEYHSLVPMPHCTCDAGKQWCD-------NDANVKLIQFLMGLNESFEQ 2554
YFT+L+ LWDE + P P+CTC K C + +QFL GLN+ +
Sbjct: 61 TEYFTKLRILWDELENFRPDPNCTCTI-KCACSVLTIIAQRKLEDQAMQFLRGLNDQYNN 119
Query: 2553 ARSQVLMMDPLPDVNKAYSMILRIERQRSVHQVFPEVLDNAAMLTHTXXXXXXXXXXXXX 2374
+S VL+M+P ++K +S +++ ERQ V + +
Sbjct: 120 VKSHVLLMEP--PISKIFSYVVQQERQLLGQNFIANVHLDRTSSINAVASPTCTHCNRTG 177
Query: 2373 XXXXXGMRGRGVPHRTREE------KSKLKCSYCHFNGHEAHECFKLHGYPDWYKQFKDQ 2212
R G P T + + C++C GH C++ HG+P K D+
Sbjct: 178 HTDAVCFRKHGFPSTTNRSNKGSSNRPRRICTHCGKTGHTIEVCYQKHGFPPGSKPLSDK 237
Query: 2211 RNAVVANMTNVEVPKEESQTVKKESNPDIAGLIQSEIAKYMATLGTGNVDNGANFAHFAG 2032
+V +T E +Q+++ + ++ S
Sbjct: 238 TASVNHTVTGDCKVTESTQSLESQDVRTSFPIVCS------------------------- 272
Query: 2031 YTGIDASQFALSTFEPIGSGS*ILDTGASKHMCISPSLLTDLTPIISPITVFLPDGTSKS 1852
A+ST S ILD+GA+ H+ S S + +PI +PI V LP G
Sbjct: 273 ---------AIST-----PSSWILDSGATDHVSSSLSHFSSFSPI-NPIDVKLPTGQHVL 317
Query: 1851 VTHTGTARLSENLILTDVLLVPSFKYNLLSISQLTHTSNFKCVFFPSHCVLQDLKTERVI 1672
TH+GT + + + L DVL +P+F YNL+SIS+L + + + +F C++Q+ T + I
Sbjct: 318 ATHSGTVKFTNSFYLVDVLYIPAFTYNLISISKLVSSLSCQLIFDHHSCIIQETNTMKKI 377
Query: 1671 ATGKAVGKLYVLTTSPDPYCSSFSKFHIPCTSSSFLFTCNSV--LDLWHKRLGHASSGTL 1498
T LY T S H P T+S + S+ +DLWH R+GH S L
Sbjct: 378 GTVDVNEGLYSFTAS---------NIHHPSTNSVIVHPKCSIQPIDLWHFRMGHLSHERL 428
Query: 1497 SHLHFLKPFLNNCNQTQLKDCDICHLSKQHRQPFPLRTECAGSVFELIHLDVWGPFHSGN 1318
FL + C+ CH +KQ + PFPL A F+L+H+D+WGP +
Sbjct: 429 QSFPFLSVDTSF-------SCNTCHHAKQKKLPFPLSHSYASQPFDLLHMDIWGPCSVTS 481
Query: 1317 LFSNTPYFLTLVDDHSRCTWTYLMSHKSQVPSLLEKFILMIKV*FDISIKAFRSDNGREF 1138
+ + YFLT+VDDH+R TW +LM +KS+ + FI ++ FD +K R+DNG EF
Sbjct: 482 MHGHK-YFLTIVDDHTRFTWLFLMQNKSETRQHIINFINQVETQFDKHVKVIRTDNGLEF 540
Query: 1137 INQWCSELFKSHGILHQRSCAYTPQQNGVVERKHRHLLDTARALLFQSKLPIDFWPFSLL 958
++ F S GI+HQ +C TPQQNG+VERKH+HLL+ R+LLFQ+ LP FW F+L+
Sbjct: 541 S---MTQYFSSKGIIHQTTCVETPQQNGIVERKHQHLLNVTRSLLFQANLPSIFWCFALM 597
Query: 957 TTTYLINRLPSSLLHWKSPYEVLYGKAPDYTLLKPFGCTAFATNIFPHKGKFDPRAHKCI 778
T+LIN +P+ LH SP+E LYG D ++L FGC +++ I H+ K DPRAH CI
Sbjct: 598 HATFLINCIPTPFLHNISPFEKLYGHPCDISILCVFGCLCYSSTITSHRTKLDPRAHPCI 657
Query: 777 FLGYEIGMKGYRLYNLTTKKLLVTREVHFLEHEFPSISP--SPNTDTPLPHAXXXXXXXX 604
FLG++ KGY L+NL T LLV+R V F E FPS + SP+ +P+P
Sbjct: 658 FLGFKPHTKGYLLFNLHTHGLLVSRNVLFHEDHFPSFTKPHSPSFSSPVP---IHYNYVD 714
Query: 603 XXXXSPPHXXXXXXXXXXXXXSLPIALRKPSRPSKLPAKLQDYVVYTTVDQLPPSVLTTQ 424
S P LR+ +RP + P LQD+ T+
Sbjct: 715 YPTFPSSSIVESSDPPTSDQHSSPPPLRRSTRPRRPPTYLQDF----------HGAFTST 764
Query: 423 TTGHVSS---YSISTFPYYISPCFSPSYVAFLANVSKIQEPSTYAQAKCDPQWVEAMDRE 253
+T H S+ + + +F Y SPS+ ++ ++S + EP +A+A W++AM E
Sbjct: 765 STAHSSTGIRHPLHSFLSY--DLLSPSFHHYVFSISSVTEPKNFAEASKSDSWLKAMHEE 822
Query: 252 LEALEKNQTWEVTDLPPGKKAIGCKWVYKVKLNPDGIVERFKARLVAKGYHQEYGVDYVD 73
+ ALE N TW +T LPP K AIGC+WVYKVK DG ++R+KARLVAKGY Q G+D+ D
Sbjct: 823 IFALEANNTWVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFD 882
Query: 72 SFSPVAKLVTVRFLIAIATLKGW 4
+FSPVAKL TVR L+++A + W
Sbjct: 883 TFSPVAKLTTVRLLLSLAAINNW 905
>ref|XP_010683397.1| PREDICTED: uncharacterized protein LOC104898087 [Beta vulgaris subsp.
vulgaris]
Length = 1038
Score = 598 bits (1542), Expect = 0.0
Identities = 379/1022 (37%), Positives = 542/1022 (53%), Gaps = 68/1022 (6%)
Frame = -1
Query: 3093 DPLQLHGSDHPGMVLVTNQLNGNNYLPWRRSMLIALGAKTKLGFINGKLPKPDETSEDFE 2914
D L D P L T++LNG+N+L W R + +ALGAK KL FI+GK P+P SE+ +
Sbjct: 21 DKYFLGSGDQPDQHLGTHKLNGDNFLTWNRGIRLALGAKNKLTFIDGKTPRPPSDSEELQ 80
Query: 2913 KWQKTDFMVISWLLNSISRDIVDAFIYAQTSKELWDELEQRFGQCNGP*LYQLQREIASI 2734
KW + D+M+ SWLLNS+ + I + FI Q++ +L++E+ +R+GQ N P L++L + ++SI
Sbjct: 81 KWMRNDYMIQSWLLNSMDKLIAEGFILQQSANQLYEEILERYGQSNAPQLFELHKHLSSI 140
Query: 2733 TQGNNTVIAYFTRLKRLWDEYHSLVPMPHCTCDAG--------KQWCDNDANVKLIQFLM 2578
QG+++++ Y+++LKR+WDE L P C C A K+ D KLIQ L+
Sbjct: 141 HQGSDSIVQYYSKLKRVWDEIQLLDGFPDCDCGALAKCSCVILKKVLAADQKQKLIQLLV 200
Query: 2577 GLNESFEQARSQVLMMDPLPDVNKAYSMILRIERQRSVHQVFPEVLDNAAMLTHTXXXXX 2398
GL+ ++ + +L MDPLP+VN+AY M+L++ERQ ++ + + ++ T
Sbjct: 201 GLDRGYDTVTTNILSMDPLPNVNRAYYMLLQVERQTRLN-----IQQDTSLQTSAFNSMK 255
Query: 2397 XXXXXXXXXXXXXGMRGRGVPHRTREEKSKLKCSYCHFNGHEAHECFKLHG-YPDWYKQF 2221
R R + +K+ KC YC +GH +CFKL G YP+W+
Sbjct: 256 QSGFQHNNAHIHPSQPERRDGKRIKYDKASRKCDYCKKSGHTMDQCFKLTGVYPEWFLNM 315
Query: 2220 KDQR------NAVVANMTNVE-----------VPKEESQTVKKESNPDIAGLIQSEIAKY 2092
K++ + + A++ + VP S + + + + E+ K
Sbjct: 316 KNKSLPTSSTSKLAAHVGDTTGECLGATPLDIVPSYHSHQPSAQVDSALVQAVYKEMLKM 375
Query: 2091 MATLGTGNVDNGANFAHFAGYTGIDASQFALSTFEPIGSGS*ILDTGASKHMCISPSLLT 1912
+ + +FAG + + + I+DTGA+ HM SL T
Sbjct: 376 VKGQPHQAPSEFTSSVNFAGIMSVSTVNSVSQSHDKFAW---IVDTGATDHMIWDRSLYT 432
Query: 1911 DLTPIISPITVFLPDGTSKSVTHTGTARLSENLILTDVLLVPSFKYNLLSISQLTHTSNF 1732
T +I+PI V LPDGT+K V TG L+ +IL DVLL+P F +NLLS S+L +N
Sbjct: 433 SFTSLITPIKVGLPDGTTKVVYITGIVHLTAKIILKDVLLIPDFTHNLLSFSKLLSQNNL 492
Query: 1731 KCVFFPSHCVLQDLKTERVIATGKAVGKLY----VLTTSPDPYCSSFSK-FHIPCTSSSF 1567
+F S QD T+ + A G LY V T S D S F+K FH+ + +F
Sbjct: 493 LAIFTSSSYHFQDPTTKEIQAIGSQQAGLYKFSSVPTVSSDVSSSCFNKSFHVDTSVPNF 552
Query: 1566 LFTCNSVLDLWHKRLGHASSGTLSHLHF-LKPFLNNCNQTQLKDCDICHLSKQHRQPFPL 1390
H RL H S+ T+S L KP N T C+ C +K H PFP+
Sbjct: 553 --------STLHARLCHLSTQTMSKLSLPYKP-----NNTSDFCCEPCVFAKSHSTPFPV 599
Query: 1389 RTECAGSVFELIHLDVWGPFHSGNLFSNTPYFLTLVDDHSRCTWTYLMSHKSQVPSLLEK 1210
AG++F+L+H+D+WGP+ +L S YFLT++DD+SR TWT+L+S KSQVP+LL++
Sbjct: 600 SHSHAGAIFQLVHVDLWGPYRQPSL-SGACYFLTILDDYSRTTWTHLVSSKSQVPTLLQE 658
Query: 1209 FILMIKV*FDISIKAFRSDNGREFINQWCSELFKSHGILHQRSCAYTPQQNGVVERKHRH 1030
FI ++ F+ SIK RSDNG E C+ LF S GI+HQRS PQQNG VERKH+H
Sbjct: 659 FIAYVENHFNTSIKIIRSDNGTEIFQAVCTHLFASKGIIHQRSLPGKPQQNGRVERKHKH 718
Query: 1029 LLDTARALLFQSKLPIDFWPFSLLTTTYLINRLPSSLLHWKSPYEVLYGKAPDYTLLKPF 850
LL+TARAL F + LP FW LL TYLIN +PSS+L WK+PYE L P Y L+
Sbjct: 719 LLETARALTFHASLPKKFWGECLLAATYLINLMPSSVLQWKTPYEFLMKLVPSYEHLRVI 778
Query: 849 GCTAFATNIFPHKGKFDPRAHKCIFLGYEIGMKGYRLYNLTTKKLLVTREVHFLEHEFP- 673
GC +A+ KF PRA KC+FLGY G KGY+LY+L + K+ ++R+V F EH FP
Sbjct: 779 GCLCYAS--IKTFDKFAPRARKCVFLGYPYGQKGYKLYDLESHKIFLSRDVKFQEHVFPF 836
Query: 672 ------------SISP----------------SPNTDTPL--PHAXXXXXXXXXXXXSPP 583
SIS SP+ P+ P + SPP
Sbjct: 837 AQSSSVSSESIHSISSPMVNPGIHDDDIPFFFSPSHTQPISSPLSMNDHSSHPTLTTSPP 896
Query: 582 HXXXXXXXXXXXXXSLPIALRKP----SRPSKLPA-KLQDYVVYTTVDQLPPSVLTTQTT 418
S+ + P S KLP+ KL+D+VV ++ LP S L+
Sbjct: 897 TSSPTANTSPTDHTSVSSSSGAPPLRRSLRHKLPSTKLKDFVVPSS--HLPSSSLS---- 950
Query: 417 GHVSSYSISTFPYYISPCFSPSYVAFLANVSKIQEPSTYAQAKCDPQWVEAMDRELEALE 238
SS+++ T P FSP+ A LANV EPS+YAQAK DP+WVEAM++EL+AL+
Sbjct: 951 ---SSFNVFTCPEL--QHFSPTSFASLANVLSHVEPSSYAQAKTDPRWVEAMNKELDALD 1005
Query: 237 KN 232
N
Sbjct: 1006 LN 1007
Score = 186 bits (473), Expect = 4e-44
Identities = 124/318 (38%), Positives = 169/318 (53%), Gaps = 44/318 (13%)
Frame = -1
Query: 5727 PQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYEIL 5548
PQQNG VERKH+HLL+TARAL F + LP FW LL ATYLIN +P+S+L WK+PYE L
Sbjct: 706 PQQNGRVERKHKHLLETARALTFHASLPKKFWGECLLAATYLINLMPSSVLQWKTPYEFL 765
Query: 5547 YGKAPDYTLLKPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKKVII 5368
P Y L+ GC +A+ KF PRA KC+F+GY G KGY+LY+L + K+ +
Sbjct: 766 MKLVPSYEHLRVIGCLCYAS--IKTFDKFAPRARKCVFLGYPYGQKGYKLYDLESHKIFL 823
Query: 5367 TREVYFLESEFP-------------SVSLP------HATDTPLPIPPSFDSSDSASIPVS 5245
+R+V F E FP S+S P H D P PS S+ + ++
Sbjct: 824 SRDVKFQEHVFPFAQSSSVSSESIHSISSPMVNPGIHDDDIPFFFSPSHTQPISSPLSMN 883
Query: 5244 D----------PPISTPLAFSTPIAIRKPHRSS-----------KLPA-KFQDYVVYTAV 5131
D PP S+P A ++P SS KLP+ K +D+VV ++
Sbjct: 884 DHSSHPTLTTSPPTSSPTANTSPTDHTSVSSSSGAPPLRRSLRHKLPSTKLKDFVVPSS- 942
Query: 5130 DQLPPGTITPHATGCAPSYPLSTFPYYISP---CFSASYVAFLANVSKIQEPTTYSQAKN 4960
LP +++ S+F + P FS + A LANV EP++Y+QAK
Sbjct: 943 -HLPSSSLS------------SSFNVFTCPELQHFSPTSFASLANVLSHVEPSSYAQAKT 989
Query: 4959 DAHWVEAMDRELEALEKN 4906
D WVEAM++EL+AL+ N
Sbjct: 990 DPRWVEAMNKELDALDLN 1007
>gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1002
Score = 269 bits (687), Expect(3) = 0.0
Identities = 135/291 (46%), Positives = 187/291 (64%), Gaps = 2/291 (0%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMS 4610
+KGY Q +DY+D+FSPV K+ TVR L+A+AT W +HQ+D+N FLHG L E++YM+
Sbjct: 552 AKGYTQTETLDYLDTFSPVVKMTTVRTLLAVATAKNWHIHQLDVNTTFLHGDLHEEVYMT 611
Query: 4609 LPEGY--SAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTP 4436
P G S VC L +SLYGLKQASRQWN + L+ GF+QS+ D+ LFTKQ
Sbjct: 612 PPPGLTVSPHQSNCVCKLVKSLYGLKQASRQWNAKLTSVLIDSGFKQSMADYSLFTKQFG 671
Query: 4435 SSFLALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLH 4256
+ F A+++YVDD++L G++ +I +K+ LD+ FTIKDLG KYFLG+E+ R+++G L+
Sbjct: 672 AKFTAILVYVDDLVLAGNDPTEINYIKSLLDQKFTIKDLGQLKYFLGMEVARSSTGIALY 731
Query: 4255 QRKYILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPD 4076
QRKY LD++ GLL KP +P +KL G+PL +P L TR D
Sbjct: 732 QRKYALDLIEDTGLLASKPCKSPMDHSVKLHKTVGTPLTDPTQYRRLLGRLIYLTNTRAD 791
Query: 4075 ITFSVQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAY 3923
I+FSV LSQFM+ P H+ AA+ +L Y+K P +GL + + S L L Y
Sbjct: 792 ISFSVNHLSQFMDQPTDVHYQAALRILKYVKNAPGKGLFFPSSSDLTLKGY 842
Score = 246 bits (628), Expect(3) = 0.0
Identities = 135/323 (41%), Positives = 191/323 (59%), Gaps = 7/323 (2%)
Frame = -1
Query: 5730 TPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYEI 5551
TPQQNG+VERKH+H++ ARAL+ QS LP FW +++ A +LINR P+S L K PYEI
Sbjct: 241 TPQQNGIVERKHQHIMTVARALVMQSNLPKSFWFYAVSHAVFLINRQPSSFLENKIPYEI 300
Query: 5550 LYGKAPDYTLLKPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKKVI 5371
+Y PD +K FGC A+AT +H ++ KFDPR +C+F+G++ +KG LY+L +++
Sbjct: 301 IYNALPDLAGIKVFGCLAYATTLHHNRKKFDPRGRRCVFLGFKPQVKGSILYDLNSRETF 360
Query: 5370 ITREVYFLESEFP-----SVSLPHATDTPLPIPPSFDSSDSASIPVSDPPISTPLA-FST 5209
++R V + E FP + L P PP +D + + P S+P++
Sbjct: 361 LSRHVEYFEHIFPFLPTSPLDLTQTISLPRHQPPLPIDTDPTPLSTNTTPTSSPVSVVPP 420
Query: 5208 PIAIRKPHRSSKLPAKFQDYVVYTAVDQLPPGTITPHATGCAPSYPLSTFPYYIS-PCFS 5032
P +RK R KLP+ DY +T + TI S PL + +IS S
Sbjct: 421 PPFVRKSTRPRKLPSYLHDY-HHTLLTTHNSPTI---------SQPLYSIHNHISYSNLS 470
Query: 5031 ASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKNQTWVVTDLPPGKKAIGCK 4852
S AF ++S I+EP +Y +A D W A+ EL ALEKN TW++T LPP K+ +GCK
Sbjct: 471 PSQKAFSLSISSIKEPNSYVEAIQDESWKTAIQTELTALEKNNTWILTPLPPNKQVVGCK 530
Query: 4851 WVYKVKLNLDGTVERFKARLVAR 4783
WV+K+K N DGT+ER KARLVA+
Sbjct: 531 WVFKLKFNSDGTIERHKARLVAK 553
Score = 186 bits (473), Expect(3) = 0.0
Identities = 89/151 (58%), Positives = 115/151 (76%)
Frame = -2
Query: 3917 DADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLSY 3738
D+DWASC TRRSVTGF FLG +L+SWK+KKQ T+S+SSAEAEYRAL+ + CE WLSY
Sbjct: 844 DSDWASCSDTRRSVTGFSFFLGPALISWKSKKQATVSKSSAEAEYRALAQSTCEAQWLSY 903
Query: 3737 LAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KIG 3558
L DF + PI L CDNQ+AL+I +NPVFHERTK++E+DCH+VR++ + GL+ I
Sbjct: 904 LLHDFGLHSFHPIVLFCDNQSALHIASNPVFHERTKNIELDCHIVREKLQVGLIHLLPIS 963
Query: 3557 SSLQLADLFTKALGPGIFTTLLSKLGMQDLH 3465
++ QLAD+FTKAL F ++ KLGM D+H
Sbjct: 964 TADQLADVFTKALSLRPFEQIIFKLGMFDIH 994
Score = 439 bits (1129), Expect = e-128
Identities = 251/634 (39%), Positives = 351/634 (55%), Gaps = 22/634 (3%)
Frame = -1
Query: 1839 GTARLSENLILTDVLLVPSFKYNLLSISQLTHTSNFKCVFFPSHCVLQDLKTERVIATGK 1660
G+ SE+ L DVL +P F +NL+S+S+L + F C +QD ++ ++I K
Sbjct: 1 GSIFFSEDFFLADVLYIPEFNFNLVSVSRLIRQLGCRLTFSGDLCDIQDSQSMKMIGAAK 60
Query: 1659 AVGKLYVLTTSPDP--YCSSFSKFHIPCTSSSFLFTCNSVLDLWHKRLGHASSGTLSHLH 1486
LYVL P Y S + FH + DLWH RLGH + L +
Sbjct: 61 HNMGLYVLDWKPKVCLYLHSVNNFH------------SYDNDLWHIRLGHLAHEKLQAMK 108
Query: 1485 FLKPFLNNCNQTQLKDCDICHLSKQHRQPFPLRTECAGSVFELIHLDVWGPFHSGNLFSN 1306
PF++ C + + C++C+L+KQ + PF A +F+L+H+D+WGP ++F +
Sbjct: 109 SNFPFID-CKKNK-DPCNVCYLAKQRQLPFSHSVTKADEIFDLLHVDIWGPTTPASIFGH 166
Query: 1305 TPYFLTLVDDHSRCTWTYLMSHKSQVPSLLEKFILMIKV*FDISIKAFRSDNGREFINQW 1126
+FLT+VDD SR TW Y M HKS+V L FI +I+ F +K RSDNG EF+
Sbjct: 167 K-FFLTIVDDKSRHTWVYFMKHKSEVADHLSSFITLIENQFGKKVKCVRSDNGPEFL--- 222
Query: 1125 CSELFKSHGILHQRSCAYTPQQNGVVERKHRHLLDTARALLFQSKLPIDFWPFSLLTTTY 946
+ GILHQ SC TPQQNG+VERKH+H++ ARAL+ QS LP FW +++ +
Sbjct: 223 LKNFYHEKGILHQTSCVETPQQNGIVERKHQHIMTVARALVMQSNLPKSFWFYAVSHAVF 282
Query: 945 LINRLPSSLLHWKSPYEVLYGKAPDYTLLKPFGCTAFATNIFPHKGKFDPRAHKCIFLGY 766
LINR PSS L K PYE++Y PD +K FGC A+AT + ++ KFDPR +C+FLG+
Sbjct: 283 LINRQPSSFLENKIPYEIIYNALPDLAGIKVFGCLAYATTLHHNRKKFDPRGRRCVFLGF 342
Query: 765 EIGMKGYRLYNLTTKKLLVTREVHFLEHEFPSISPSP------------------NTDTP 640
+ +KG LY+L +++ ++R V + EH FP + SP +TD P
Sbjct: 343 KPQVKGSILYDLNSRETFLSRHVEYFEHIFPFLPTSPLDLTQTISLPRHQPPLPIDTD-P 401
Query: 639 LPHAXXXXXXXXXXXXSPPHXXXXXXXXXXXXXSLPIALRKPSRPSKLPAKLQDYVVYTT 460
P + PP P +RK +RP KLP+ L DY
Sbjct: 402 TPLSTNTTPTSSPVSVVPP----------------PPFVRKSTRPRKLPSYLHDY----- 440
Query: 459 VDQLPPSVLTTQTTGHVSS--YSISTFPYYISPCFSPSYVAFLANVSKIQEPSTYAQAKC 286
++LTT + +S YSI Y + SPS AF ++S I+EP++Y +A
Sbjct: 441 ----HHTLLTTHNSPTISQPLYSIHNHISYSN--LSPSQKAFSLSISSIKEPNSYVEAIQ 494
Query: 285 DPQWVEAMDRELEALEKNQTWEVTDLPPGKKAIGCKWVYKVKLNPDGIVERFKARLVAKG 106
D W A+ EL ALEKN TW +T LPP K+ +GCKWV+K+K N DG +ER KARLVAKG
Sbjct: 495 DESWKTAIQTELTALEKNNTWILTPLPPNKQVVGCKWVFKLKFNSDGTIERHKARLVAKG 554
Query: 105 YHQEYGVDYVDSFSPVAKLVTVRFLIAIATLKGW 4
Y Q +DY+D+FSPV K+ TVR L+A+AT K W
Sbjct: 555 YTQTETLDYLDTFSPVVKMTTVRTLLAVATAKNW 588
>gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1136
Score = 258 bits (659), Expect(3) = 0.0
Identities = 131/289 (45%), Positives = 185/289 (64%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMS 4610
+KGY Q G+D+ D+FSPVAKL TVR LI++A ++ L Q+D+NN+FLHG L+E++YM
Sbjct: 689 AKGYTQMEGLDFFDTFSPVAKLTTVRLLISLAAIHNCHLKQLDVNNSFLHGDLNEEVYMQ 748
Query: 4609 LPEGYSAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTPSS 4430
LP G + G+VC L+RSLYGLKQASRQW L+ G+ S DH LF K +P+
Sbjct: 749 LPPGITPSFPGQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLFLKCSPAI 808
Query: 4429 FLALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQR 4250
A++IYVDD++L G++L +I + + L F IKDLG+ KYFLG+E+ R ++G +L QR
Sbjct: 809 TTAILIYVDDIVLAGNDLTEIHHLTSLLHNTFQIKDLGNLKYFLGLEVARNHTGIHLCQR 868
Query: 4249 KYILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPDIT 4070
KY LD+L+ G+L KP TP L SG+P + L TRP I
Sbjct: 869 KYTLDLLSDTGMLASKPVSTPMDYSTHLSASSGTPFTDTAAYRRLVGRLIYLPNTRPAIA 928
Query: 4069 FSVQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAY 3923
++VQQLSQF+++P ++H A +L YLKG P G+ + +SS+ L A+
Sbjct: 929 YAVQQLSQFVSNPPTAHRQALFRILCYLKGTPGSGIFLSVNSSVQLRAF 977
Score = 239 bits (611), Expect(3) = 0.0
Identities = 134/325 (41%), Positives = 197/325 (60%), Gaps = 9/325 (2%)
Frame = -1
Query: 5730 TPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYEI 5551
TPQQNG+VERKH+HLL+ R+LLFQ+ LP FW F+L A +LIN +P L SP+E
Sbjct: 381 TPQQNGIVERKHQHLLNVTRSLLFQANLPSIFWCFALKHAAFLINCIPTPFLHNISPFEK 440
Query: 5550 LYGKAPDYTLLKPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKKVI 5371
LYG D ++L+ FGC +++ I H+ K DPRAH C+F+G++ KGY L NL T ++
Sbjct: 441 LYGHPCDISILRVFGCLCYSSIITSHRTKLDPRAHPCIFLGFKPHTKGYLLVNLHTHGLL 500
Query: 5370 ITREVYFLESEFPSVSLPHAT--DTPLPIP------PSFDSSDSASIPVSDPPISTPLAF 5215
+++ V F E FPS + P++ +P+PIP PSF S S+ + S+PP P
Sbjct: 501 VSQNVIFHEDHFPSFTKPNSPSFSSPVPIPYNYADYPSFPS--SSIVESSEPP--PPDQH 556
Query: 5214 STPIAIRKPHRSSKLPAKFQDY-VVYTAVDQLPPGTITPHATGCAPSYPLSTFPYYISPC 5038
S+P +R+ R + P QD+ +T+ PH++ +PL +F Y
Sbjct: 557 SSPPPLRRSTRPRRPPTYLQDFHGAFTSTG--------PHSS-TGIRHPLHSFISY--DR 605
Query: 5037 FSASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKNQTWVVTDLPPGKKAIG 4858
S S+ ++ ++S + +P + +A W++AM E+ ALE N TWV+T LPP K AIG
Sbjct: 606 LSPSFHHYVFSISSVTKPKNFVEASKSDSWLKAMHEEISALEANNTWVLTTLPPHKTAIG 665
Query: 4857 CKWVYKVKLNLDGTVERFKARLVAR 4783
C+WVYKVK DG+++R+KARLVA+
Sbjct: 666 CRWVYKVKHKADGSIDRYKARLVAK 690
Score = 203 bits (517), Expect(3) = 0.0
Identities = 94/151 (62%), Positives = 116/151 (76%)
Frame = -2
Query: 3917 DADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLSY 3738
D DWA CP TRRS+TGF ++LG SL+SWK+KKQ T+SRSS+EAEYRAL+ T CEL WLSY
Sbjct: 979 DYDWAGCPDTRRSITGFAVYLGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSY 1038
Query: 3737 LAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KIG 3558
L DFHI + +P L CDNQ AL I +NP+FHERTKH+EIDCH+VRD+ GL+ +
Sbjct: 1039 LLKDFHIDLIRPSILYCDNQFALQIASNPIFHERTKHIEIDCHIVRDKVSTGLLKLLPVS 1098
Query: 3557 SSLQLADLFTKALGPGIFTTLLSKLGMQDLH 3465
SSLQLAD+ TK L P +F + SKLGM ++H
Sbjct: 1099 SSLQLADILTKPLSPFVFHSHYSKLGMLNIH 1129
Score = 462 bits (1190), Expect = e-135
Identities = 285/777 (36%), Positives = 412/777 (53%), Gaps = 14/777 (1%)
Frame = -1
Query: 2301 CSYCHFNGHEAHECFKLHGYPDWYKQFKDQRNAVVANMTNVEVPKEESQTVKKESNPDIA 2122
C++C GH C++ HG+P K D+ +V +T E +Q+++ +
Sbjct: 1 CTHCGKTGHTIEVCYQKHGFPPGSKPLSDKTASVNHTVTGDCKVTESTQSLESQDVRFTP 60
Query: 2121 GLIQSEIAKYM-ATLGTGNVDNGANFAHFAGYTGIDASQFALSTFEPIGSGS*ILDTGAS 1945
Q+ +A +T GT A T A+ST S ILD+GA+
Sbjct: 61 QQYQALLALIQQSTTGTS-----------ASCTSFPIVCSAIST-----PSSWILDSGAT 104
Query: 1944 KHMCISPSLLTDLTPIISPITVFLPDGTSKSVTHTGTARLSENLILTDVLLVPSFKYNLL 1765
H+ + S + +PI +PI V LP G S TH+G + + + L DVL +P F YNL+
Sbjct: 105 DHVSSTLSHFSSFSPI-NPIDVKLPTGQHVSATHSGIVKFTNSFYLVDVLYIPDFTYNLI 163
Query: 1764 SISQLTHTSNFKCVFFPSHCVLQDLKTERVIATGKAVGKLYVLTTSPDPYCSSFSKFHIP 1585
SIS+L + + + +F C++Q+ T + I T G LY T + H P
Sbjct: 164 SISKLVSSLSCQFIFDRHSCIIQETNTMKKIGTVDVNGGLYSFTAN---------NIHNP 214
Query: 1584 CTSSSFLFTCNSV--LDLWHKRLGHASSGTLSHLHFLKPFLNNCNQTQLKDCDICHLSKQ 1411
T+S + S+ +DLWH R+GH S L + PFL+ + C+ CH KQ
Sbjct: 215 STNSIIVHPKCSIQPIDLWHFRMGHLSQERLQLMKQSFPFLS---VDKSFSCNTCHHDKQ 271
Query: 1410 HRQPFPLRTECAGSVFELIHLDVWGPFHSGNLFSNTPYFLTLVDDHSRCTWTYLMSHKSQ 1231
+ FPL A F+L+H+D+WGP ++ + YFL +VDDH+R TW +LM +KS+
Sbjct: 272 KKLSFPLSHSYALQPFDLLHMDIWGPCPVTSMHGHK-YFLAIVDDHTRFTWLFLMQNKSE 330
Query: 1230 VPSLLEKFILMIKV*FDISIKAFRSDNGREFINQWCSELFKSHGILHQRSCAYTPQQNGV 1051
+ FI ++ FD ++K R+DNG EF ++ F S GI+HQ +C TPQQNG+
Sbjct: 331 TRQHIINFINQVETQFDKNVKVIRTDNGLEFS---MTQYFSSKGIIHQTTCVETPQQNGI 387
Query: 1050 VERKHRHLLDTARALLFQSKLPIDFWPFSLLTTTYLINRLPSSLLHWKSPYEVLYGKAPD 871
VERKH+HLL+ R+LLFQ+ LP FW F+L +LIN +P+ LH SP+E LYG D
Sbjct: 388 VERKHQHLLNVTRSLLFQANLPSIFWCFALKHAAFLINCIPTPFLHNISPFEKLYGHPCD 447
Query: 870 YTLLKPFGCTAFATNIFPHKGKFDPRAHKCIFLGYEIGMKGYRLYNLTTKKLLVTREVHF 691
++L+ FGC +++ I H+ K DPRAH CIFLG++ KGY L NL T LLV++ V F
Sbjct: 448 ISILRVFGCLCYSSIITSHRTKLDPRAHPCIFLGFKPHTKGYLLVNLHTHGLLVSQNVIF 507
Query: 690 LEHEFPSI----SPSPNTDTPLPH------AXXXXXXXXXXXXSPPHXXXXXXXXXXXXX 541
E FPS SPS ++ P+P+ + PP
Sbjct: 508 HEDHFPSFTKPNSPSFSSPVPIPYNYADYPSFPSSSIVESSEPPPPDQHSS--------- 558
Query: 540 SLPIALRKPSRPSKLPAKLQDYVVYTTVDQLPPSVLTTQTTGHVSSYSISTFPYYIS-PC 364
P LR+ +RP + P LQD+ T T H S+ +IS
Sbjct: 559 --PPPLRRSTRPRRPPTYLQDF-----------HGAFTSTGPHSSTGIRHPLHSFISYDR 605
Query: 363 FSPSYVAFLANVSKIQEPSTYAQAKCDPQWVEAMDRELEALEKNQTWEVTDLPPGKKAIG 184
SPS+ ++ ++S + +P + +A W++AM E+ ALE N TW +T LPP K AIG
Sbjct: 606 LSPSFHHYVFSISSVTKPKNFVEASKSDSWLKAMHEEISALEANNTWVLTTLPPHKTAIG 665
Query: 183 CKWVYKVKLNPDGIVERFKARLVAKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATL 13
C+WVYKVK DG ++R+KARLVAKGY Q G+D+ D+FSPVAKL TVR LI++A +
Sbjct: 666 CRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLISLAAI 722
>gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1423
Score = 606 bits (1563), Expect = 0.0
Identities = 372/1051 (35%), Positives = 553/1051 (52%), Gaps = 22/1051 (2%)
Frame = -1
Query: 3090 PLQLHGSDHPGMVLVTNQLNGNNYLPWRRSMLIALGAKTKLGFINGKLPKPDETSEDFEK 2911
P L +++P + LV+ LN +NYL W +SML+ LG K KL FI+G L +P D
Sbjct: 14 PYFLPSNENPSISLVSAPLNDHNYLSWSQSMLLVLGTKNKLAFIDGSLARPVTAGVDQTA 73
Query: 2910 WQKTDFMVISWLLNSISRDIVDAFIYAQTSKELWDELEQRFGQCNGP*LYQLQREIASIT 2731
W + + +VISW++ S+ ++ + I+ T+ ++W++L++R+ Q + + +L EI S+
Sbjct: 74 WDRCNKLVISWIVQSLDTSLIPSVIWMPTASQIWNDLKKRYYQGDAFRISELLEEIYSLK 133
Query: 2730 QGNNTVIAYFTRLKRLWDEYHSLVPMPHCTCDAGKQWCDNDANVKLIQFLMGLNESFEQA 2551
QGN ++ YFT L+ LW E P+P CTC + C +I+FL GLNE +
Sbjct: 134 QGNMSITHYFTTLQGLWQELDHFCPIPSCTCFTTE--C-------VIRFLKGLNEQYSNV 184
Query: 2550 RSQVLMMDPLPDVNKAYSMILRIERQRSVHQVFPEVLDNAAMLTHTXXXXXXXXXXXXXX 2371
RSQV++MDPLP V K +SMIL+ ER+ F DN + +
Sbjct: 185 RSQVMLMDPLPSVQKVFSMILQQERE------FHGTNDNQVLAVTSNNERNNY------- 231
Query: 2370 XXXXGMRGRGVPHRTREEKSKLKCSYCHFNGHEAHECFKLHGYPDWYKQFK--DQRNAVV 2197
+G R ++ +K+ CS+C GH C+K HG P +K + +Q +V
Sbjct: 232 ------KGSKTFKRNKDYNTKV-CSHCGRIGHLVDSCYKKHGPPLQHKHGRIVNQYQSVS 284
Query: 2196 ANMTNVEVPKEESQTVKKESNPDIAGLIQSEIAKYMATLGTGNVDNGANFAHFAGYTGID 2017
T+ + + V S + + G+ + + A + +
Sbjct: 285 DEDTDDDQSVHSQRVVSHNSGNMFTPEQHQALLALLQQSGSTSSHSVNQLAGPSILSSPK 344
Query: 2016 ASQFALSTFEPIGSGS*ILDTGASKHMCISPSLLTDLTPIISPITVFLPDGTSKSVTHTG 1837
LS S I+DTGA+ H+C + + I PI + LP+G+ S +G
Sbjct: 345 PPGMILSFPYSHNSDCWIIDTGATDHVCKNINFFQSYRRI-KPILIQLPNGSQVSTCVSG 403
Query: 1836 TARLSENLILTDVLLVPSFKYNLLSISQLTHTSNFKCVFFPSHCVLQDLKTERVIATGKA 1657
T LS+ LTDVL +P+F +NL+S+S+L T + F S C +Q + R+I +
Sbjct: 404 TVLLSKTCYLTDVLFIPNFHFNLISVSKLAKTLSCTLTFSDSDCQIQANHSMRMIGAAEL 463
Query: 1656 VGKLYVLTTSPDPYCSSFSKFHIPCTSSSFLFTCNSVLDLWHKRLGHASSGTLSHLHFLK 1477
LY + +SP+ S CTS F + DLWH RLGH S LS L
Sbjct: 464 RAGLYAMVSSPE------SNVVHHCTSHFFTYQS----DLWHLRLGHLSHDKLSALKGSY 513
Query: 1476 PFLNNCNQTQLKDCDICHLSKQHRQPFPLRTECAGSVFELIHLDVWGPFHSGNLFSNTPY 1297
P + CN+ L C+ICHL+K R PFP + +VF+LIH+D+WGP ++F + Y
Sbjct: 514 PEIQ-CNKISLP-CEICHLAKHKRLPFPDSLTKSENVFDLIHVDIWGPLSVASIFGHK-Y 570
Query: 1296 FLTLVDDHSRCTWTYLMSHKSQVPSLLEKFILMIKV*FDISIKAFRSDNGREFI-NQWCS 1120
FLT+VDD SR TW + M +K + LL+ F+ ++ F +IK R+DNG EF+ W +
Sbjct: 571 FLTIVDDKSRFTWIFFMKNKFETKLLLQNFVSFVQTQFQQNIKTIRTDNGSEFLLKDWYA 630
Query: 1119 ELFKSHGILHQRSCAYTPQQNGVVERKHRHLLDTARALLFQSKLPIDFWPFSLLTTTYLI 940
+L GI+HQ SC TPQQNGVVERKH+H+L ARAL+FQS + FW +++ +LI
Sbjct: 631 KL----GIVHQTSCVNTPQQNGVVERKHQHILSMARALMFQSNVSKMFWNYAIGHAVHLI 686
Query: 939 NRLPSSLLHWKSPYEVLYGKAPDYTLLKPFGCTAFATNIFPHKGKFDPRAHKCIFLGYEI 760
NRLP+ L SPY VLY + PD++ LK FGC AFA+ + ++ K +PR+ KC+FLGY
Sbjct: 687 NRLPTRFLQQNSPYYVLYSEKPDFSHLKVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSS 746
Query: 759 GMKGYRLYNLTTKKLLVTREVHFLEHEFP---------------SISPSPNTD-TPLP-- 634
G KG+ +Y+L T++ ++R+V F E+ FP I+ P T P+P
Sbjct: 747 GTKGFIMYDLKTRETFISRDVQFYENIFPLQKDFSIQSTDGPVVPIAQMPLTSCDPIPSH 806
Query: 633 -HAXXXXXXXXXXXXSPPHXXXXXXXXXXXXXSLPIALRKPSRPSKLPAKLQDYVVYTTV 457
H + P ++P R R P LQDY
Sbjct: 807 THDNLDETEHEHNSSTLPMTNSSNSDQPNIEINIPEIRRTSQRVKNRPGYLQDYHCTLAA 866
Query: 456 DQLPPSVLTTQTTGHVSSYSISTFPYYISPCFSPSYVAFLANVSKIQEPSTYAQAKCDPQ 277
++ S T + Y IS + Y S +S +F++ +S I EP +Y A
Sbjct: 867 SKVDQSSSTAR-------YPISDYLPYTS--YSAVQQSFVSTISSIIEPRSYQDAINHDC 917
Query: 276 WVEAMDRELEALEKNQTWEVTDLPPGKKAIGCKWVYKVKLNPDGIVERFKARLVAKGYHQ 97
W EA+ EL+AL+K +TW +TDLPP K+A+GC+WV+KVK + DG VER+KARLVAKG+ Q
Sbjct: 918 WKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAKGFTQ 977
Query: 96 EYGVDYVDSFSPVAKLVTVRFLIAIATLKGW 4
G+DY+D+FSPV ++ T+R +AIA W
Sbjct: 978 IPGLDYIDTFSPVVRMTTIRVFLAIAAASNW 1008
Score = 257 bits (657), Expect(3) = 0.0
Identities = 130/289 (44%), Positives = 184/289 (63%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMS 4610
+KG+ Q G+DY+D+FSPV ++ T+R +AIA + W +HQ+DIN AFLHG L E++YM
Sbjct: 972 AKGFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHGDLVEEVYMK 1031
Query: 4609 LPEGYSAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTPSS 4430
P G + KVC L++SLYGLKQASRQWN + L FGF QS D+ LFTK+T
Sbjct: 1032 PPPGLILSSPNKVCKLQKSLYGLKQASRQWNIKLTETLKLFGFVQSKSDYSLFTKRTNIG 1091
Query: 4429 FLALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQR 4250
F+A+++YVDD++++GS+ +I+ VK LD+ F+IKDLG YFLG+E R++ G + QR
Sbjct: 1092 FIAILVYVDDLIISGSDETEIMKVKRLLDKQFSIKDLGQLSYFLGLEFSRSDQGISVCQR 1151
Query: 4249 KYILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPDIT 4070
KY L++L GLL KP TP +L +P L TRPD+
Sbjct: 1152 KYALELLQDTGLLASKPCSTPMDHTTRLHHDPLDLYSDPSSYRRLVGRLIYLTHTRPDLA 1211
Query: 4069 FSVQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAY 3923
F+V +LSQFM+ P ++H+ AA +L Y+K P++GL + + S L LT Y
Sbjct: 1212 FAVGKLSQFMHQPNNAHFQAARKVLRYVKATPTKGLFFPSSSDLKLTGY 1260
Score = 244 bits (623), Expect(3) = 0.0
Identities = 138/341 (40%), Positives = 204/341 (59%), Gaps = 25/341 (7%)
Frame = -1
Query: 5730 TPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYEI 5551
TPQQNGVVERKH+H+L ARAL+FQS + FW +++ A +LINRLP L SPY +
Sbjct: 643 TPQQNGVVERKHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFLQQNSPYYV 702
Query: 5550 LYGKAPDYTLLKPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKKVI 5371
LY + PD++ LK FGC AFA+ + ++ K +PR+ KC+F+GY G KG+ +Y+L T++
Sbjct: 703 LYSEKPDFSHLKVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSSGTKGFIMYDLKTRETF 762
Query: 5370 ITREVYFLESEFP---SVSLPHATDTPL------------PIPP-SFDSSD-------SA 5260
I+R+V F E+ FP S+ +TD P+ PIP + D+ D S+
Sbjct: 763 ISRDVQFYENIFPLQKDFSI-QSTDGPVVPIAQMPLTSCDPIPSHTHDNLDETEHEHNSS 821
Query: 5259 SIPVSDPPISTP--LAFSTPIAIRKPHRSSKLPAKFQDYVVYTAVDQLPPGTITPHATGC 5086
++P+++ S + + P R R P QDY A ++ + T
Sbjct: 822 TLPMTNSSNSDQPNIEINIPEIRRTSQRVKNRPGYLQDYHCTLAASKVDQSSSTAR---- 877
Query: 5085 APSYPLSTFPYYISPCFSASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKN 4906
YP+S + Y S +SA +F++ +S I EP +Y A N W EA+ EL+AL+K
Sbjct: 878 ---YPISDYLPYTS--YSAVQQSFVSTISSIIEPRSYQDAINHDCWKEAIRAELDALDKQ 932
Query: 4905 QTWVVTDLPPGKKAIGCKWVYKVKLNLDGTVERFKARLVAR 4783
+TW++TDLPP K+A+GC+WV+KVK + DG+VER+KARLVA+
Sbjct: 933 KTWILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAK 973
Score = 187 bits (474), Expect(3) = 0.0
Identities = 89/149 (59%), Positives = 111/149 (74%)
Frame = -2
Query: 3917 DADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLSY 3738
D+DWA+CP +RRS++GFC FLG++L+SWK+KKQ +SRSS+EAEYRAL+ VCE WL
Sbjct: 1262 DSDWATCPDSRRSISGFCFFLGNALVSWKSKKQNVVSRSSSEAEYRALALGVCEAQWLHK 1321
Query: 3737 LAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KIG 3558
L DF + PI L CDNQ+ALYI ANPVFHERTKH+EIDCH VRDQ +AG + I
Sbjct: 1322 LLTDFQLQDLIPISLFCDNQSALYIAANPVFHERTKHVEIDCHTVRDQVQAGFIHLAPIT 1381
Query: 3557 SSLQLADLFTKALGPGIFTTLLSKLGMQD 3471
SS QLAD+ TK L P +F + KLG+ +
Sbjct: 1382 SSGQLADILTKPLLPKMFQDFVCKLGLSN 1410
>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
Length = 1125
Score = 271 bits (692), Expect(3) = 0.0
Identities = 146/320 (45%), Positives = 199/320 (62%), Gaps = 3/320 (0%)
Frame = -1
Query: 5733 YTPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYE 5554
YTPQQNGVVERKHRH+L++ARA FQ+ LP+ FW + TA ++INRLP LL ++P+E
Sbjct: 401 YTPQQNGVVERKHRHILESARAFXFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFE 460
Query: 5553 ILYGKAPDYTLLKPFGCAAFATNIH-PHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKK 5377
LYGK P Y+ ++ FGC A+ATN+H PH KF PRA +C+F+GY +G K Y+LY+L T +
Sbjct: 461 RLYGKLPSYSHIRVFGCLAYATNVHVPH--KFAPRAKRCIFLGYPVGQKAYKLYDLDTHQ 518
Query: 5376 VIITREVYFLESEFPSVSLPHATDTPLPIPPSFDSSDSASIPVSDPPISTPLAFSTPIAI 5197
+ +R+V F E+ FP S+P + P F S + P +P +
Sbjct: 519 MFTSRDVVFHETIFPYESIPSPSSNSDP----FLLSHHLASPPPEP------------IL 562
Query: 5196 RKPHRSSKLPAKFQDYVV--YTAVDQLPPGTITPHATGCAPSYPLSTFPYYISPCFSASY 5023
R+ R P +DYV T+ + LPP + +P YPL F Y +S +
Sbjct: 563 RRSQRPHHPPMALRDYVCNQVTSPNHLPPLSSSPQK---GTRYPLCNFVSYHR--YSPQH 617
Query: 5022 VAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKNQTWVVTDLPPGKKAIGCKWVY 4843
+F A VS+ EPT+Y++A + +HW EAM EL LE N TW +T LPPGKK IGC+WVY
Sbjct: 618 RSFTAAVSQDIEPTSYAEATSHSHWQEAMQSELATLEANHTWSLTSLPPGKKPIGCRWVY 677
Query: 4842 KVKLNLDGTVERFKARLVAR 4783
K+K + DGT+ERFKARLVA+
Sbjct: 678 KIKXHSDGTIERFKARLVAK 697
Score = 237 bits (604), Expect(3) = 0.0
Identities = 131/289 (45%), Positives = 173/289 (59%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMS 4610
+KGY Q G+DY D+FSP AK++ VR L+A+A W LHQ+D +MS
Sbjct: 696 AKGYTQLEGIDYHDTFSPTAKMIXVRCLLALAAAQNWSLHQLDK-------------FMS 742
Query: 4609 LPEGYSAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTPSS 4430
P Q + VCHL +SLYGLKQASRQW +F + A GF QS D+ LFT + S
Sbjct: 743 PPPSLRRQGENLVCHLHKSLYGLKQASRQWFAKFSTAIQAVGFIQSKADYSLFTCRKGKS 802
Query: 4429 FLALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQR 4250
F AL+IYVDD+L+TG++++ IVA+K +L F IKDLG KYFLG+E+ R+ G + QR
Sbjct: 803 FTALLIYVDDILITGNDVNAIVALKQFLHSHFRIKDLGDLKYFLGIEVSRSKKGISISQR 862
Query: 4249 KYILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPDIT 4070
KY L+IL G LG KP + P KL SG L P L +TRPDIT
Sbjct: 863 KYTLEILKDGGFLGAKPVNFPMEQNTKL-SDSGELLKGPSQYRRLVGRLIYLTITRPDIT 921
Query: 4069 FSVQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAY 3923
+SV LS+FM++P H +AA+ +L YLK P QGL + + + L L A+
Sbjct: 922 YSVHVLSRFMHAPRRPHMEAALRVLRYLKNSPGQGLFFPSQNDLSLRAF 970
Score = 187 bits (475), Expect(3) = 0.0
Identities = 87/151 (57%), Positives = 110/151 (72%)
Frame = -2
Query: 3917 DADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLSY 3738
D DWA CP +RRS TG+C+FLGSSL+SW+TK+Q T+S SS EAEYRA++ T CEL WL
Sbjct: 972 DXDWAGCPISRRSXTGYCVFLGSSLISWRTKRQKTVSLSSXEAEYRAMAGTCCELSWLRS 1031
Query: 3737 LAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KIG 3558
L D I PKP L CDN AAL+I NPVFHERT+H+E+DCH +RD+ + G V I
Sbjct: 1032 LLKDLRILHPKPALLYCDNTAALHIAVNPVFHERTRHIEMDCHFIRDKIQDGSVVTKHIA 1091
Query: 3557 SSLQLADLFTKALGPGIFTTLLSKLGMQDLH 3465
S+ Q AD+FTK LG F+T++ KLG+ D+H
Sbjct: 1092 STDQXADVFTKPLGKETFSTMIHKLGVLDIH 1122
Score = 481 bits (1238), Expect = e-142
Identities = 285/662 (43%), Positives = 379/662 (57%), Gaps = 8/662 (1%)
Frame = -1
Query: 1965 ILDTGASKHMCISPSLLTDLTPIISPITVFLPDGTSKSVTHTGTARLSENLILTDVLLVP 1786
I+D+GA+ H+ SP+LL + + V +P G +T G L+ L +VL VP
Sbjct: 110 IIDSGATDHITSSPTLLVNSSKNTFLPPVAMPSGEQAPITSIGNLPLNSAATLKNVLGVP 169
Query: 1785 SFKYNLLSISQLTHTSNFKCVFFPSHCVLQDLKTERVIATGKAVGKLYVLTT--SPDPYC 1612
SFK +L+S+S++T N FFP C+LQDL T I G+ LY L S P
Sbjct: 170 SFKVDLMSVSRVTKDLNCSVTFFPHWCILQDLTTRTTIGLGEQRDGLYYLVALASEKPKT 229
Query: 1611 SSFSKFHIPCTSSSFLFTCNSVLDLWHKRLGHASSGTLSHLHFLKPFLNNCNQTQLKDCD 1432
+ S C S S T ++ L WH+RLGH SS S L F+ L N + CD
Sbjct: 230 QTPSAATTSCRSPSSQVTSSTAL--WHRRLGHLSS---SRLDFMAKHLLNFHFQSNNACD 284
Query: 1431 ICHLSKQHRQPFPLRTECAGSVFELIHLDVWGPFHSGNLFSNTPYFLTLVDDHSRCTWTY 1252
+C L+KQ + PF + + + FELIH D+WGP+ +L S YFLT+VDD+SR T +
Sbjct: 285 VCALAKQRQLPFSVSSISSVRPFELIHCDIWGPYKIASL-SGAKYFLTIVDDYSRFTXVF 343
Query: 1251 LMSHKSQVPSLLEKFILMIKV*FDISIKAFRSDNGREFINQWCSELFKSHGILHQRSCAY 1072
M HKS+ LL F ++ F +SI R DNG EF + E FK G +Q SC Y
Sbjct: 344 FMHHKSETQHLLVNFFSFVQTQFHVSIANIRVDNGGEFFSX--REFFKQKGTTYQHSCVY 401
Query: 1071 TPQQNGVVERKHRHLLDTARALLFQSKLPIDFWPFSLLTTTYLINRLPSSLLHWKSPYEV 892
TPQQNGVVERKHRH+L++ARA FQ+ LP+ FW + T ++INRLP+ LL ++P+E
Sbjct: 402 TPQQNGVVERKHRHILESARAFXFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFER 461
Query: 891 LYGKAPDYTLLKPFGCTAFATNIF-PHKGKFDPRAHKCIFLGYEIGMKGYRLYNLTTKKL 715
LYGK P Y+ ++ FGC A+ATN+ PHK F PRA +CIFLGY +G K Y+LY+L T ++
Sbjct: 462 LYGKLPSYSHIRVFGCLAYATNVHVPHK--FAPRAKRCIFLGYPVGQKAYKLYDLDTHQM 519
Query: 714 LVTREVHFLEHEFP--SI-SPSPNTDTPLPHAXXXXXXXXXXXXSPPHXXXXXXXXXXXX 544
+R+V F E FP SI SPS N+D L PP
Sbjct: 520 FTSRDVVFHETIFPYESIPSPSSNSDPFL--------LSHHLASPPPE------------ 559
Query: 543 XSLPIALRKPSRPSKLPAKLQDYVV--YTTVDQLPPSVLTTQTTGHVSSYSISTFPYYIS 370
PI LR+ RP P L+DYV T+ + LPP + Q + Y + F Y
Sbjct: 560 ---PI-LRRSQRPHHPPMALRDYVCNQVTSPNHLPPLSSSPQKG---TRYPLCNFVSYHR 612
Query: 369 PCFSPSYVAFLANVSKIQEPSTYAQAKCDPQWVEAMDRELEALEKNQTWEVTDLPPGKKA 190
+SP + +F A VS+ EP++YA+A W EAM EL LE N TW +T LPPGKK
Sbjct: 613 --YSPQHRSFTAAVSQDIEPTSYAEATSHSHWQEAMQSELATLEANHTWSLTSLPPGKKP 670
Query: 189 IGCKWVYKVKLNPDGIVERFKARLVAKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATLK 10
IGC+WVYK+K + DG +ERFKARLVAKGY Q G+DY D+FSP AK++ VR L+A+A +
Sbjct: 671 IGCRWVYKIKXHSDGTIERFKARLVAKGYTQLEGIDYHDTFSPTAKMIXVRCLLALAAAQ 730
Query: 9 GW 4
W
Sbjct: 731 NW 732
>gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1311
Score = 275 bits (703), Expect(3) = 0.0
Identities = 144/291 (49%), Positives = 191/291 (65%), Gaps = 2/291 (0%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMS 4610
+KGY Q G+DY+ +FSPVAKL VR L+A+ N+W L Q+D+NNAFLHG LDE++YM
Sbjct: 874 AKGYTQMEGLDYLYAFSPVAKLTIVRLLLAMVAFNQWHLRQLDVNNAFLHGELDEEVYMQ 933
Query: 4609 LPEGYSAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTPSS 4430
+P G S VC L+RSLY LKQASRQW T+ G L++ GF++S DH LF + T S
Sbjct: 934 VPPGLSVPNSQMVCRLQRSLYELKQASRQWFTKLSGLLISLGFEKSHSDHSLFLRFTGSI 993
Query: 4429 FLALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQR 4250
AL++YVDD++LTG++ +I V LD+ F IKDLG+ KYFLG+EI R++SG +L QR
Sbjct: 994 ITALLVYVDDIILTGNSESEIQDVIKLLDQAFKIKDLGNLKYFLGMEIARSSSGIHLCQR 1053
Query: 4249 KYILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLI--EPDXXXXXXXXXXXLNMTRPD 4076
KY LDIL+ G+LGC+P TP KLQ +G+PL L TRPD
Sbjct: 1054 KYTLDILSDSGMLGCQPNVTPMDYSTKLQATAGTPLSTEASSSYRRLIGRLIYLTNTRPD 1113
Query: 4075 ITFSVQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAY 3923
IT++VQQLSQ+M++P S H AA +L YLKG G+ +A + L A+
Sbjct: 1114 ITYAVQQLSQYMSNPTSVHQQAAYRILRYLKGTSGSGIFLSATGTPQLRAF 1164
Score = 233 bits (593), Expect(3) = 0.0
Identities = 132/338 (39%), Positives = 194/338 (57%), Gaps = 22/338 (6%)
Frame = -1
Query: 5730 TPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYEI 5551
TP+QNG+ ERKH+HLL+ RALLFQ+ LP +FW ++LL ATYL+N +P L SPYE
Sbjct: 551 TPEQNGIAERKHQHLLNVTRALLFQANLPSNFWCYALLHATYLVNCIPTPFLHNVSPYEK 610
Query: 5550 LYGKAPDYTLLKPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKKVI 5371
L+G P+ + L+ FGC +A+ + ++ K DPRAH C+FIG++ KGY +YNL +I
Sbjct: 611 LHGHLPEISHLRVFGCLCYASTLKANRKKLDPRAHPCIFIGFKASTKGYLVYNLHLHSII 670
Query: 5370 ITREVYFLE---SEFPSVSLPHATDTPLPIPPSFDSSDSASIPVSDP-PISTPLAFSTPI 5203
+R V F E S+ P H + + +P SF+ S I P P+ TP+
Sbjct: 671 TSRNVVFYEDHFSQIPETQSSHPESSTI-LPKSFNISPHDPIIEKPPQPVIQETTDHTPL 729
Query: 5202 AI-------------RKPHRSSK---LPAKFQDYVVYTAVDQLPPGTITPHATGCAPS-- 5077
+ +P RS++ P QDY +++ H T + S
Sbjct: 730 QLTSTDESAFSQRTKHEPRRSTRPKHAPTYLQDY----------HHSLSSHDTKVSTSSR 779
Query: 5076 YPLSTFPYYISPCFSASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKNQTW 4897
YPLS+ Y S ++ F+ ++S EP++Y++A W++AM+ EL+AL+ N TW
Sbjct: 780 YPLSSVLSYSR--LSHTHKHFVMSISSTVEPSSYAEASQYDCWIKAMEAELQALQSNNTW 837
Query: 4896 VVTDLPPGKKAIGCKWVYKVKLNLDGTVERFKARLVAR 4783
+T LPP K AIGC+WVYK+K DG++ER+KARLVA+
Sbjct: 838 KLTLLPPHKTAIGCRWVYKIKHRADGSIERYKARLVAK 875
Score = 187 bits (474), Expect(3) = 0.0
Identities = 86/146 (58%), Positives = 112/146 (76%)
Frame = -2
Query: 3917 DADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLSY 3738
D+DWA C +R+S TGF I+LGSS +SW++KKQ+T+SRSS+EAEYRA++ T CEL WL+Y
Sbjct: 1166 DSDWAGCQDSRKSTTGFVIYLGSSPVSWQSKKQSTVSRSSSEAEYRAMATTTCELQWLTY 1225
Query: 3737 LAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KIG 3558
L DF + KP + CDNQ+A+ I NPVFHERTKH+EIDCH+VR + +GL+ +
Sbjct: 1226 LLQDFRHNFTKPATIYCDNQSAIQIATNPVFHERTKHIEIDCHIVRQKVTSGLLKLLPVP 1285
Query: 3557 SSLQLADLFTKALGPGIFTTLLSKLG 3480
SSLQLAD+FTKAL P +F L +KLG
Sbjct: 1286 SSLQLADIFTKALPPTVFQNLCNKLG 1311
Score = 427 bits (1098), Expect = e-121
Identities = 254/678 (37%), Positives = 366/678 (53%), Gaps = 24/678 (3%)
Frame = -1
Query: 1965 ILDTGASKHMCISPSLLTDLTPIISPITVFLPDGTSKSVTHTGTARLSENLILTDVLLVP 1786
ILD+ A+ H+ S S L I+P+ V LP+G TH+G LS+++ L +VL +P
Sbjct: 269 ILDSRATDHVTCSLSNLHSYE-CINPVPVKLPNGHQVHATHSGIVHLSKSITLFNVLYMP 327
Query: 1785 SFKYNLLSISQLTHTSNFKCVFFPSHCVLQDLKTERVIATGKAVGKLYVLTTSPDPY--- 1615
+F +NL+SIS+L +++ +F + C+LQD T I + LY L PD
Sbjct: 328 AFTFNLISISKLVSSTHCALIFSSTSCMLQDASTRTKIGIVEEKHGLYHLI--PDQVNKV 385
Query: 1614 -CSSFSKFHIPCTSSSFLFTCNSVLDLWHKRLGHASSGTLSHLHFLKPFLNNCNQTQLKD 1438
CS+ H C +DLWH R+GH S+ L + P L N ++T +
Sbjct: 386 ICSTI--IHPKCKIIP--------IDLWHFRMGHLSTERLQCMKPHYPILRN-DKTFV-- 432
Query: 1437 CDICHLSKQHRQPFPLRTECAGSVFELIHLDVWGPFHSGNLFSNTPYFLTLVDDHSRCTW 1258
C+ CH +K + PF T A +F L+H+D+WGP ++ + YFLT+VDDHSR TW
Sbjct: 433 CNTCHYAKHKKLPFSSSTSHASHIFYLLHVDIWGPCSKPSMHGHK-YFLTIVDDHSRFTW 491
Query: 1257 TYLMSHKSQVPSLLEKFILMIKV*FDISIKAFRSDNGREFINQWCSELFKSHGILHQRSC 1078
+LM K++ ++ FI ++ ++ IK RSDNG EF+ + S GI+HQ +C
Sbjct: 492 VHLMHTKAETRDIIVNFIASVETQYNKKIKKIRSDNGYEFL---MPSFYASKGIMHQTTC 548
Query: 1077 AYTPQQNGVVERKHRHLLDTARALLFQSKLPIDFWPFSLLTTTYLINRLPSSLLHWKSPY 898
TP+QNG+ ERKH+HLL+ RALLFQ+ LP +FW ++LL TYL+N +P+ LH SPY
Sbjct: 549 VETPEQNGIAERKHQHLLNVTRALLFQANLPSNFWCYALLHATYLVNCIPTPFLHNVSPY 608
Query: 897 EVLYGKAPDYTLLKPFGCTAFATNIFPHKGKFDPRAHKCIFLGYEIGMKGYRLYNLTTKK 718
E L+G P+ + L+ FGC +A+ + ++ K DPRAH CIF+G++ KGY +YNL
Sbjct: 609 EKLHGHLPEISHLRVFGCLCYASTLKANRKKLDPRAHPCIFIGFKASTKGYLVYNLHLHS 668
Query: 717 LLVTREVHFLEHEFPSI----SPSPNTDTPLPHAXXXXXXXXXXXXSPPHXXXXXXXXXX 550
++ +R V F E F I S P + T LP + P
Sbjct: 669 IITSRNVVFYEDHFSQIPETQSSHPESSTILPKSFNISPHDPIIEKPP------QPVIQE 722
Query: 549 XXXSLPIAL----------------RKPSRPSKLPAKLQDYVVYTTVDQLPPSVLTTQTT 418
P+ L R+ +RP P LQDY + S +
Sbjct: 723 TTDHTPLQLTSTDESAFSQRTKHEPRRSTRPKHAPTYLQDYHHSLSSHDTKVSTSSRYPL 782
Query: 417 GHVSSYSISTFPYYISPCFSPSYVAFLANVSKIQEPSTYAQAKCDPQWVEAMDRELEALE 238
V SYS S ++ F+ ++S EPS+YA+A W++AM+ EL+AL+
Sbjct: 783 SSVLSYS----------RLSHTHKHFVMSISSTVEPSSYAEASQYDCWIKAMEAELQALQ 832
Query: 237 KNQTWEVTDLPPGKKAIGCKWVYKVKLNPDGIVERFKARLVAKGYHQEYGVDYVDSFSPV 58
N TW++T LPP K AIGC+WVYK+K DG +ER+KARLVAKGY Q G+DY+ +FSPV
Sbjct: 833 SNNTWKLTLLPPHKTAIGCRWVYKIKHRADGSIERYKARLVAKGYTQMEGLDYLYAFSPV 892
Query: 57 AKLVTVRFLIAIATLKGW 4
AKL VR L+A+ W
Sbjct: 893 AKLTIVRLLLAMVAFNQW 910
Score = 149 bits (375), Expect = 3e-32
Identities = 85/279 (30%), Positives = 140/279 (50%), Gaps = 13/279 (4%)
Frame = -1
Query: 3036 LNGNNYLPWRRSMLIALGAKTKLGFINGKLPKPDETSEDFEKWQKTDFMVISWLLNSISR 2857
L+ NY W RSM+IAL AK KL F++G P+P +T + W++ + MV+SW+++S++
Sbjct: 1 LDSTNYHSWSRSMIIALSAKNKLEFVDGSAPEPLKTDRTYGAWRRCNNMVLSWIVHSVAA 60
Query: 2856 DIVDAFIYAQTSKELWDELEQRFGQCNGP*LYQLQREIASITQGNNTVIAYFTRLKRLWD 2677
I + ++ ++++W +L+ R+ Q + + LQ+E +++ QG +V YFTRL+ +WD
Sbjct: 61 SIRQSILWMDKAEDIWRDLKTRYSQGDLLRISDLQQEASTLRQGTLSVTEYFTRLRVIWD 120
Query: 2676 EYHSLVPMPHCTCDAGKQWCDNDANV-------KLIQFLMGLNESFEQARSQVLMMDPLP 2518
E + P P CTC+ + C A + + +QFL GLN+ + RS VL+MDP+P
Sbjct: 121 EIENFRPDPACTCNV-RCSCSAFAIIAQRKLEDRAMQFLRGLNDQYTNIRSHVLLMDPIP 179
Query: 2517 DVNKAYSMILRIERQRSVHQVFPEVLDNAAMLTHTXXXXXXXXXXXXXXXXXXGMRGRGV 2338
+ K +S + + ERQ + G
Sbjct: 180 AITKIFSYVAQQERQ---------------------------------------LLGNSS 200
Query: 2337 PHRTREEK------SKLKCSYCHFNGHEAHECFKLHGYP 2239
P+ E K +K C+YC GH + C+K HG P
Sbjct: 201 PNLNFEPKDVSINAAKTICNYCGRIGHTENICYKKHGMP 239
>gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1346
Score = 598 bits (1541), Expect = 0.0
Identities = 365/1049 (34%), Positives = 549/1049 (52%), Gaps = 38/1049 (3%)
Frame = -1
Query: 3036 LNGNNYLPWRRSMLIALGAKTKLGFINGKLPKP-DETSEDFEKWQKTDFMVISWLLNSIS 2860
L+G+NY W RS+ ALGAK K F++G +P P D F W + + ++ SW+LNS+
Sbjct: 1 LDGSNYHSWARSLRRALGAKLKFEFLDGTIPMPVDAFDPSFRAWNRCNMLIHSWILNSVE 60
Query: 2859 RDIVDAFIYAQTSKELWDELEQRFGQCNGP*LYQLQREIASITQGNNTVIAYFTRLKRLW 2680
I + ++ + ++W +L++RF Q + + ++Q+EI ++TQG +V +++ LK LW
Sbjct: 61 PSISRSIVFMDNASDVWLDLKERFSQGDLVRVSEIQQEIYALTQGTRSVTTFYSDLKALW 120
Query: 2679 DEYHSLVPMPHCTC------DAGKQWCDNDANVKLIQFLMGLNESFEQARSQVLMMDPLP 2518
+E +P+P+CTC DA + + + +++FL GLN+ F +SQ+L+++PLP
Sbjct: 121 EELEIYMPIPNCTCHHRCSCDAMRLARRHHHTLHVMRFLTGLNDEFNAVKSQILLIEPLP 180
Query: 2517 DVNKAYSMILRIERQRSVHQVFPEVLDNAAMLTHTXXXXXXXXXXXXXXXXXXGMRGRGV 2338
+ K +SM+++ ERQ V P + D+ A++ + + +G
Sbjct: 181 SITKIFSMVIQFERQNCV----PNLDDSKALVNASTS------------------KSQGS 218
Query: 2337 PHRTREEKSKLKCSYCHFNGHEAHECFKLHGYPDWYKQFKDQRNAVVANMTNVEVPKEES 2158
+ SK C+YCH H CF+ HG P
Sbjct: 219 ANGRSNSGSKRYCTYCHKTNHFVENCFQKHGVPP-------------------------- 252
Query: 2157 QTVKKESNPDIAGLIQSEIAKYMATLGTGNVDNGANFAHFAGYTGIDASQFALSTFEPIG 1978
+K S + + + + G G +HF Y+ I + AL T+
Sbjct: 253 HMMKNHSG-----------SAHHSAVDGGEHTKGMKISHFF-YSSI-CNNIALDTW---- 295
Query: 1977 SGS*ILDTGASKHMCISPSLLTDLTPIISPITVFLPDGTSKSVTHTGTARLSENLILTDV 1798
I+D+GAS H+C S + I +P+ + LP+G + + GT S + +T+V
Sbjct: 296 ----IIDSGASHHICASLHWFHSYSEI-NPMIIKLPNGNHVTTKYAGTVVFSSSFSITNV 350
Query: 1797 LLVPSFKYNLLSISQLTHTSNFKCVFFPSHCVLQDLKTERVIATGKAVGKLYVLTTSPDP 1618
L VP+F NL+S+SQL H + + F + C +Q+ K+ ++I G++ LY LT + +
Sbjct: 351 LYVPTFTVNLISVSQLCHHTPYTLNFTDTICSIQEQKSLKMIGLGESRDGLYYLTQT-NK 409
Query: 1617 YCSSFSKFHIPCTSSSFLFTCNSVL----DLWHKRLGHASSGTLSHLHFLKPFLNNCNQT 1450
C+S S ++I SS + N+V +WH RLGH SS ++ LH PF+ N + +
Sbjct: 410 ECAS-SNYNI----SSIFSSANNVHIPENAIWHFRLGHLSSSRIALLHSQFPFIVNDSSS 464
Query: 1449 QLKDCDICHLSKQHRQPFPLRTECAGSVFELIHLDVWGPFHSGNLFSNTPYFLTLVDDHS 1270
CDICH +K + PF A F+LIH D+WGP ++ N YFLT VDDHS
Sbjct: 465 V---CDICHFAKHRKLPFVHSYHKAIKCFDLIHFDIWGPISIKSVH-NHAYFLTAVDDHS 520
Query: 1269 RCTWTYLMSHKSQVPSLLEKFILMIKV*FDISIKAFRSDNGREFINQWCSELFKSHGILH 1090
R TW LM +KS+ ++ FI IK ++ S+K+ R+DNG EF+ + + S GILH
Sbjct: 521 RYTWITLMKNKSEARLHVQNFIHFIKTQYNHSVKSIRTDNGPEFL---MPDFYASKGILH 577
Query: 1089 QRSCAYTPQQNGVVERKHRHLLDTARALLFQSKLPIDFWPFSLLTTTYLINRLPSSLLHW 910
Q SC +PQQNG VERKH+ +L+ RALL QS LP FW +++ Y++NR+P+ L
Sbjct: 578 QTSCVDSPQQNGRVERKHQQILNIGRALLVQSNLPKSFWCYAVSHAVYIMNRVPAPNLQN 637
Query: 909 KSPYEVLYGKAPDYTLLKPFGCTAFATNIFPHKGKFDPRAHKCIFLGYEIGMKGYRLYNL 730
KSPY +LY APD+ LK FG FA+ + H+ K D RA KC+FLGY+ G+KG L +L
Sbjct: 638 KSPYTLLYNTAPDFDTLKVFGSLVFASTLQSHRTKLDLRARKCVFLGYKSGVKGVVLLDL 697
Query: 729 TTKKLLVTREVHFLEHEFP-------------SISPSPNTDTPLPHAXXXXXXXXXXXXS 589
+ ++R+V EH FP SISP+PN + S
Sbjct: 698 LNNSIFLSRDVTHHEHIFPYQSSSPKTPWEYHSISPTPNDSDITLDSDISLDINAEQSPS 757
Query: 588 PPH--------------XXXXXXXXXXXXXSLPIALRKPSRPSKLPAKLQDYVVYTTVDQ 451
PPH P+ KP R + P L DYV + T
Sbjct: 758 PPHSSLSPNISNDTVISDTSTSTPPPKDHNDSPLLHSKPIRQRRAPLHLSDYVCHNT--- 814
Query: 450 LPPSVLTTQTTGHVSSYSISTFPYYISPCFSPSYVAFLANVSKIQEPSTYAQAKCDPQWV 271
P+ + T+G S Y +S+F + SPS+ AF +++ EP +Y +A WV
Sbjct: 815 -SPTSHESLTSGTKSKYPLSSF--HSLTLLSPSHKAFSMSITHCTEPQSYEEASKHEHWV 871
Query: 270 EAMDRELEALEKNQTWEVTDLPPGKKAIGCKWVYKVKLNPDGIVERFKARLVAKGYHQEY 91
AM EL AL KN TW++ +LPP K IGCKWVYKVK +G +ER+KARLVAKGY+Q
Sbjct: 872 TAMKEELNALAKNCTWKIVELPPHTKPIGCKWVYKVKHKANGQIERYKARLVAKGYNQVE 931
Query: 90 GVDYVDSFSPVAKLVTVRFLIAIATLKGW 4
G+DY ++FSPVAK+ TVR L+A+A +K W
Sbjct: 932 GIDYFETFSPVAKITTVRTLLAVAAIKNW 960
Score = 282 bits (721), Expect(3) = e-176
Identities = 135/289 (46%), Positives = 188/289 (65%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMS 4610
+KGY+Q G+DY ++FSPVAK+ TVR L+A+A + W LHQ+D+NNAFLHG L ED+YM
Sbjct: 924 AKGYNQVEGIDYFETFSPVAKITTVRTLLAVAAIKNWHLHQLDVNNAFLHGDLQEDVYMK 983
Query: 4609 LPEGYSAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTPSS 4430
+P+G + VC L++SLYGLKQASR+W + L+ G+ QS+ D+ LFT ++
Sbjct: 984 IPDGVTCAKPNSVCKLQKSLYGLKQASRKWYEKLTNLLLKEGYIQSISDYSLFTLTKGNT 1043
Query: 4429 FLALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQR 4250
F AL++YVDD++L G ++D+ +K LD F IK+LG KYFLG+E+ + G + QR
Sbjct: 1044 FTALLVYVDDIILAGDSIDEFDRIKNVLDLAFKIKNLGKLKYFLGLEVAHSRLGITISQR 1103
Query: 4249 KYILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPDIT 4070
KY LD+L GLLGCKPA TP +KL +G+P + LN TRPDI
Sbjct: 1104 KYCLDLLKDSGLLGCKPASTPLDTSIKLHSAAGTPYADISGYRRIVGKLLYLNTTRPDIA 1163
Query: 4069 FSVQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAY 3923
F+ QQLSQFM +P + H++AA +L YLK P QG+ ++ S + L Y
Sbjct: 1164 FATQQLSQFMQAPTNVHFNAACRVLRYLKNNPGQGIFFSRTSEMQLIGY 1212
Score = 225 bits (574), Expect(3) = e-176
Identities = 135/348 (38%), Positives = 183/348 (52%), Gaps = 32/348 (9%)
Frame = -1
Query: 5730 TPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYEI 5551
+PQQNG VERKH+ +L+ RALL QS LP FW +++ A Y++NR+P L KSPY +
Sbjct: 584 SPQQNGRVERKHQQILNIGRALLVQSNLPKSFWCYAVSHAVYIMNRVPAPNLQNKSPYTL 643
Query: 5550 LYGKAPDYTLLKPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKKVI 5371
LY APD+ LK FG FA+ + H+ K D RA KC+F+GY+ G+KG L +L +
Sbjct: 644 LYNTAPDFDTLKVFGSLVFASTLQSHRTKLDLRARKCVFLGYKSGVKGVVLLDLLNNSIF 703
Query: 5370 ITREVYFLESEFPSVS--------------LPHATDTPL-------------PIPP--SF 5278
++R+V E FP S P+ +D L P PP S
Sbjct: 704 LSRDVTHHEHIFPYQSSSPKTPWEYHSISPTPNDSDITLDSDISLDINAEQSPSPPHSSL 763
Query: 5277 DSSDSASIPVSDPPISTPLA---FSTPIAIRKPHRSSKLPAKFQDYVVYTAVDQLPPGTI 5107
+ S +SD STP +P+ KP R + P DYV + P +
Sbjct: 764 SPNISNDTVISDTSTSTPPPKDHNDSPLLHSKPIRQRRAPLHLSDYVCHNT----SPTSH 819
Query: 5106 TPHATGCAPSYPLSTFPYYISPCFSASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRE 4927
+G YPLS+F + S S+ AF +++ EP +Y +A HWV AM E
Sbjct: 820 ESLTSGTKSKYPLSSF--HSLTLLSPSHKAFSMSITHCTEPQSYEEASKHEHWVTAMKEE 877
Query: 4926 LEALEKNQTWVVTDLPPGKKAIGCKWVYKVKLNLDGTVERFKARLVAR 4783
L AL KN TW + +LPP K IGCKWVYKVK +G +ER+KARLVA+
Sbjct: 878 LNALAKNCTWKIVELPPHTKPIGCKWVYKVKHKANGQIERYKARLVAK 925
Score = 167 bits (422), Expect(3) = e-176
Identities = 75/133 (56%), Positives = 99/133 (74%)
Frame = -2
Query: 3917 DADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLSY 3738
DADWA C +R+S++G+C F+G SL+SW+ KKQ T+SRSS+EAEYRALS+ CEL WL Y
Sbjct: 1214 DADWAGCMDSRKSISGYCFFIGKSLVSWRAKKQATVSRSSSEAEYRALSSAACELQWLLY 1273
Query: 3737 LAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KIG 3558
L D + + + L CDNQ+A++I +NPVFHERTKHLEIDCHLVR++ G + +
Sbjct: 1274 LFADLRVQLTRTPTLYCDNQSAVHIASNPVFHERTKHLEIDCHLVREKLLKGTLKLLPVS 1333
Query: 3557 SSLQLADLFTKAL 3519
+S Q+AD TKAL
Sbjct: 1334 TSDQVADFLTKAL 1346
>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
Length = 1322
Score = 272 bits (696), Expect(3) = 0.0
Identities = 150/337 (44%), Positives = 206/337 (61%), Gaps = 20/337 (5%)
Frame = -1
Query: 5733 YTPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYE 5554
YTPQQNGVVERKHRH+L++ARA FQ+ LP+ FW + TA ++INRLP LL ++P+E
Sbjct: 573 YTPQQNGVVERKHRHILESARAFRFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFE 632
Query: 5553 ILYGKAPDYTLLKPFGCAAFATNIH-PHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKK 5377
LYGK P Y+ ++ FGC A+ATN+H PH KF PRA +C+F+GY +G K Y+LY+L T +
Sbjct: 633 RLYGKLPSYSHIRVFGCLAYATNVHVPH--KFAPRAKRCIFLGYPVGQKAYKLYDLDTHQ 690
Query: 5376 VIITREVYFLESEFPSVSLPHATDTPLPIPPSFDSSDSASIPVSDPP------------- 5236
+ +R+V F E+ FP S+P + P+ P S S + PP
Sbjct: 691 MFTSRDVVFHETIFPYESIPSPSSNSDPVIPLSISDLSPPVQQPSPPEPISPIQQPSLPN 750
Query: 5235 -ISTPLAFSTP---IAIRKPHRSSKLPAKFQDYVV--YTAVDQLPPGTITPHATGCAPSY 5074
+ST + ++P +R+ R P +DYV T + LPP + +P Y
Sbjct: 751 SVSTQPSHASPPPEPILRRSQRPHHPPMALRDYVCNQVTFPNHLPPLSSSPQK---GTRY 807
Query: 5073 PLSTFPYYISPCFSASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKNQTWV 4894
PL F Y +S + +F A VS+ EPT+Y++A + +HW EAM EL ALE N TW
Sbjct: 808 PLCNFVSYHR--YSPQHRSFTAAVSQDIEPTSYAEAASHSHWQEAMQSELAALEANHTWS 865
Query: 4893 VTDLPPGKKAIGCKWVYKVKLNLDGTVERFKARLVAR 4783
+T LP GKK IGC+WVYK+K + DGT+ERFKARLVA+
Sbjct: 866 LTSLPLGKKPIGCRWVYKIKRHSDGTIERFKARLVAK 902
Score = 229 bits (584), Expect(3) = 0.0
Identities = 128/289 (44%), Positives = 170/289 (58%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMS 4610
+KGY Q G+DY D+FSP AK++TVR L+A+A W LHQ+D+NNAFLHG L E+IYMS
Sbjct: 901 AKGYTQLEGIDYHDTFSPTAKMITVRCLLALAAAQNWSLHQLDVNNAFLHGDLHEEIYMS 960
Query: 4609 LPEGYSAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTPSS 4430
P G RQ F + A GF QS D+ LFT + S
Sbjct: 961 PPPGLR---------------------RQGENLFSTAIQAAGFVQSKADYSLFTCRKGKS 999
Query: 4429 FLALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQR 4250
F+AL+IYVDD+L+TG++ + IVA+K +L F IKDLG KYFLG+E+ R+ G + QR
Sbjct: 1000 FIALLIYVDDILITGNDANAIVALKQFLHSDFRIKDLGDLKYFLGIEVSRSKKGISISQR 1059
Query: 4249 KYILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPDIT 4070
KY L+IL G LG KP + P +KL S L +P L +TRPDIT
Sbjct: 1060 KYTLEILKDGGFLGAKPVNFPMEQNIKL-SDSSELLKDPSQYRRLVGRLIYLTITRPDIT 1118
Query: 4069 FSVQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAY 3923
+SV LS+FM++P H +AA+ +L YLK P QGL + + + L L A+
Sbjct: 1119 YSVHVLSRFMHAPRRPHMEAALRVLRYLKNSPGQGLFFPSQNDLSLRAF 1167
Score = 189 bits (480), Expect(3) = 0.0
Identities = 87/151 (57%), Positives = 112/151 (74%)
Frame = -2
Query: 3917 DADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLSY 3738
D+DWA CP +RRS TG+C+FLGSSL+SW+TK+Q T+S SSAEAEYRA++ T CEL WL
Sbjct: 1169 DSDWAGCPISRRSTTGYCVFLGSSLISWRTKRQKTVSLSSAEAEYRAMTGTCCELSWLRS 1228
Query: 3737 LAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KIG 3558
L D I PKP L CDN AL+I ANPVFHERT+H+E+DCH +R++ + G I
Sbjct: 1229 LLKDLRILHPKPALLYCDNTTALHIAANPVFHERTRHIEMDCHFIREKIQDGSFVTKHIA 1288
Query: 3557 SSLQLADLFTKALGPGIFTTLLSKLGMQDLH 3465
S+ QLAD+FTK LG F+T++ KLG+ D+H
Sbjct: 1289 STNQLADVFTKPLGKETFSTMIHKLGVLDIH 1319
Score = 588 bits (1516), Expect = e-179
Identities = 384/1033 (37%), Positives = 534/1033 (51%), Gaps = 34/1033 (3%)
Frame = -1
Query: 3000 MLIALGAKTKLGFINGKLPKPDETSEDFE--KWQKTDFMVISWLLNSISRDIVDAFIYAQ 2827
M I+L AK+KLGFI+G P T + E W+K + M++SW+LNS+S+D+ D+ I++
Sbjct: 1 MTISLNAKSKLGFIDGTTTMPSATDKPDEHASWKKCNDMILSWILNSLSQDLADSVIFST 60
Query: 2826 TSKELWDELEQRFGQCNGP*LYQLQREIASITQGNNTVIAYFTRLKRLWDE---YHSLVP 2656
T++E+W++L RF Q N P ++Q++R IA +TQ TV AY+TRLK+LWDE Y+ V
Sbjct: 61 TAQEVWEDLRDRFSQSNAPRIFQIERGIACLTQDQMTVAAYYTRLKKLWDELGSYNDTV- 119
Query: 2655 MPHCTCDAGKQWCDNDANVKLIQFLMGLNESFEQARSQVLMMDPLPDVNKAYSMILRIER 2476
C+C A + +L+QFLMGLNES+ R Q+L+M+PLP+V KAYS I++ E+
Sbjct: 120 ---CSCGADYK------RRRLMQFLMGLNESYNAIRGQILLMNPLPNVAKAYSSIVQEEK 170
Query: 2475 QRSVHQVFPEVLDNAAMLTHTXXXXXXXXXXXXXXXXXXGMRGRGVPHRTREEKSK-LKC 2299
QRS+ E +N+AM+ G+G R+ K L C
Sbjct: 171 QRSLGAT-RETTENSAMVVRRAEPMALAVR-----------HGQGSSSRSNPSNRKPLHC 218
Query: 2298 SYCHFNGHEAHECFKLHGYPDWYKQFKDQR-----------NAVVANMTNVEVPKEESQT 2152
SYC + H C+KL+GYP + + R N+ ++ NV
Sbjct: 219 SYCDRDHHVRETCWKLNGYPPEHPKHASNRSNHGSTHFKRNNSHQSSANNVN-----EHP 273
Query: 2151 VKKESNPDIAGLIQSEIAKYMATLGTGNVDNGANFAHFAGYTGIDASQFALSTFEPIGSG 1972
V +E GL +I + ++ + N A +G+ + L
Sbjct: 274 VMQEVPSMTNGLSDLQIQQILSIMQGKGTTQSTNPKANAAASGLLQTLLHLHRL------ 327
Query: 1971 S*ILDTGASKHMCISPSLLTDLTPIISPITVFLPDGTSKSVTHTGTARLSENLILTDVLL 1792
I+D+GA+ H+ SP+LL + + V +P G +T G L+ + L +VL
Sbjct: 328 --IIDSGATDHITSSPTLLVNSSKNTLLPLVGMPSGEQAPITSIGNLPLNPAVTLKNVLG 385
Query: 1791 VPSFKYNLLSISQLTHTSNFKCVFFPSHCVLQDLKTERVIATGKAVGKLYVLT--TSPDP 1618
VPSFK +L+S+S++T N FFP C+LQDL T I G+ LY L S P
Sbjct: 386 VPSFKVDLMSVSRVTKDLNCSVTFFPHWCILQDLTTRTTIGLGEQRDGLYYLVALASEKP 445
Query: 1617 YCSSFSKFHIPCTSSSFLFTCNSVLDLWHKRLGHASSGTLSHLHFLKPFLNNCNQTQLKD 1438
+ S C S S T ++ LWH RLGH SS S L F+ L N
Sbjct: 446 KNQTPSAAATSCRSPSSQVTSSTA--LWHHRLGHLSS---SRLDFMAKHLLNFPFQSNNA 500
Query: 1437 CDICHLSKQHRQPFPLRTECAGSVFELIHLDVWGPFHSGNLFSNTPYFLTLVDDHSRCTW 1258
CD+C L+KQ R PF + + + FELIH D+WGP+ +L +N
Sbjct: 501 CDVCALAKQRRLPFSVSSISSIRPFELIHCDIWGPYKIASLSAN---------------- 544
Query: 1257 TYLMSHKSQVPSLLEKFILMIKV*FDISIKAFRSDNGREFINQWCSELFKSHGILHQRSC 1078
R DNG EF + E FK G +Q SC
Sbjct: 545 -------------------------------IRVDNGGEFFSM--REFFKQKGTTYQHSC 571
Query: 1077 AYTPQQNGVVERKHRHLLDTARALLFQSKLPIDFWPFSLLTTTYLINRLPSSLLHWKSPY 898
YTPQQNGVVERKHRH+L++ARA FQ+ LP+ FW + T ++INRLP+ LL ++P+
Sbjct: 572 VYTPQQNGVVERKHRHILESARAFRFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPF 631
Query: 897 EVLYGKAPDYTLLKPFGCTAFATNI-FPHKGKFDPRAHKCIFLGYEIGMKGYRLYNLTTK 721
E LYGK P Y+ ++ FGC A+ATN+ PH KF PRA +CIFLGY +G K Y+LY+L T
Sbjct: 632 ERLYGKLPSYSHIRVFGCLAYATNVHVPH--KFAPRAKRCIFLGYPVGQKAYKLYDLDTH 689
Query: 720 KLLVTREVHFLEHEFP--SI-SPSPNTDTPLPHAXXXXXXXXXXXXSP--------PHXX 574
++ +R+V F E FP SI SPS N+D +P + P P
Sbjct: 690 QMFTSRDVVFHETIFPYESIPSPSSNSDPVIPLSISDLSPPVQQPSPPEPISPIQQPSLP 749
Query: 573 XXXXXXXXXXXSLP-IALRKPSRPSKLPAKLQDYVV--YTTVDQLPPSVLTTQTTGHVSS 403
P LR+ RP P L+DYV T + LPP + Q +
Sbjct: 750 NSVSTQPSHASPPPEPILRRSQRPHHPPMALRDYVCNQVTFPNHLPPLSSSPQKG---TR 806
Query: 402 YSISTFPYYISPCFSPSYVAFLANVSKIQEPSTYAQAKCDPQWVEAMDRELEALEKNQTW 223
Y + F Y +SP + +F A VS+ EP++YA+A W EAM EL ALE N TW
Sbjct: 807 YPLCNFVSYHR--YSPQHRSFTAAVSQDIEPTSYAEAASHSHWQEAMQSELAALEANHTW 864
Query: 222 EVTDLPPGKKAIGCKWVYKVKLNPDGIVERFKARLVAKGYHQEYGVDYVDSFSPVAKLVT 43
+T LP GKK IGC+WVYK+K + DG +ERFKARLVAKGY Q G+DY D+FSP AK++T
Sbjct: 865 SLTSLPLGKKPIGCRWVYKIKRHSDGTIERFKARLVAKGYTQLEGIDYHDTFSPTAKMIT 924
Query: 42 VRFLIAIATLKGW 4
VR L+A+A + W
Sbjct: 925 VRCLLALAAAQNW 937
>gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1353
Score = 256 bits (653), Expect(3) = e-180
Identities = 129/289 (44%), Positives = 183/289 (63%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMS 4610
+KG+ Q G+DY+D+FSPV ++ T+R +AIA + W +HQ+DIN AFLHG L E++YM
Sbjct: 902 AKGFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHGDLVEEVYMK 961
Query: 4609 LPEGYSAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTPSS 4430
P G + KVC L++SLYGLKQ SRQWN + L FGF QS D+ LFTK+T
Sbjct: 962 PPPGLILSSPNKVCKLQKSLYGLKQVSRQWNIKLTETLKLFGFVQSKSDYSLFTKRTNIG 1021
Query: 4429 FLALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQR 4250
F+A+++YVDD++++GS+ +I+ VK LD+ F+IKDLG YFLG+E R++ G + QR
Sbjct: 1022 FIAILVYVDDLIISGSDETEIMKVKRLLDKQFSIKDLGQLSYFLGLEFSRSDQGISVCQR 1081
Query: 4249 KYILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPDIT 4070
KY L++L GLL KP TP +L +P L TRPD+
Sbjct: 1082 KYALELLQDTGLLASKPCSTPMDHTTRLHHDPLDLYSDPSSYRRLVGRLIYLTHTRPDLA 1141
Query: 4069 FSVQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAY 3923
F+V +LSQFM+ P ++H+ AA +L Y+K P++GL + + S L LT Y
Sbjct: 1142 FAVGKLSQFMHQPNNAHFQAARKVLRYVKATPTKGLFFPSSSDLKLTGY 1190
Score = 244 bits (623), Expect(3) = e-180
Identities = 138/341 (40%), Positives = 204/341 (59%), Gaps = 25/341 (7%)
Frame = -1
Query: 5730 TPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYEI 5551
TPQQNGVVERKH+H+L ARAL+FQS + FW +++ A +LINRLP L SPY +
Sbjct: 573 TPQQNGVVERKHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFLQQNSPYYV 632
Query: 5550 LYGKAPDYTLLKPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKKVI 5371
LY + PD++ LK FGC AFA+ + ++ K +PR+ KC+F+GY G KG+ +Y+L T++
Sbjct: 633 LYSEKPDFSHLKVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSSGTKGFIMYDLKTRETF 692
Query: 5370 ITREVYFLESEFP---SVSLPHATDTPL------------PIPP-SFDSSD-------SA 5260
I+R+V F E+ FP S+ +TD P+ PIP + D+ D S+
Sbjct: 693 ISRDVQFYENIFPLQKDFSI-QSTDGPVVPIAQMPLTSCDPIPSHTHDNLDETEHEHNSS 751
Query: 5259 SIPVSDPPISTP--LAFSTPIAIRKPHRSSKLPAKFQDYVVYTAVDQLPPGTITPHATGC 5086
++P+++ S + + P R R P QDY A ++ + T
Sbjct: 752 TLPMTNSSNSDQPNIEINIPEIRRTSQRVKNRPGYLQDYHCTLAASKVDQSSSTAR---- 807
Query: 5085 APSYPLSTFPYYISPCFSASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKN 4906
YP+S + Y S +SA +F++ +S I EP +Y A N W EA+ EL+AL+K
Sbjct: 808 ---YPISDYLPYTS--YSAVQQSFVSTISSIIEPRSYQDAINHDCWKEAIRAELDALDKQ 862
Query: 4905 QTWVVTDLPPGKKAIGCKWVYKVKLNLDGTVERFKARLVAR 4783
+TW++TDLPP K+A+GC+WV+KVK + DG+VER+KARLVA+
Sbjct: 863 KTWILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAK 903
Score = 187 bits (474), Expect(3) = e-180
Identities = 89/149 (59%), Positives = 111/149 (74%)
Frame = -2
Query: 3917 DADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLSY 3738
D+DWA+CP +RRS++GFC FLG++L+SWK+KKQ +SRSS+EAEYRAL+ VCE WL
Sbjct: 1192 DSDWATCPDSRRSISGFCFFLGNALVSWKSKKQNVVSRSSSEAEYRALALGVCEAQWLHK 1251
Query: 3737 LAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KIG 3558
L DF + PI L CDNQ+ALYI ANPVFHERTKH+EIDCH VRDQ +AG + I
Sbjct: 1252 LLTDFQLQDLIPISLFCDNQSALYIAANPVFHERTKHVEIDCHTVRDQVQAGFIHLAPIT 1311
Query: 3557 SSLQLADLFTKALGPGIFTTLLSKLGMQD 3471
SS QLAD+ TK L P +F + KLG+ +
Sbjct: 1312 SSGQLADILTKPLLPKMFQDFVCKLGLSN 1340
Score = 582 bits (1501), Expect = e-176
Identities = 362/1019 (35%), Positives = 533/1019 (52%), Gaps = 20/1019 (1%)
Frame = -1
Query: 3000 MLIALGAKTKLGFINGKLPKPDETSEDFEKWQKTDFMVISWLLNSISRDIVDAFIYAQTS 2821
ML+ LG K KL F++G L +P D W + + +VISW++ S+ ++ + I+ T+
Sbjct: 1 MLLVLGTKNKLAFVDGSLARPVTAGVDQTAWDRCNKLVISWIVQSLDTSLIPSVIWMPTA 60
Query: 2820 KELWDELEQRFGQCNGP*LYQLQREIASITQGNNTVIAYFTRLKRLWDEYHSLVPMPHCT 2641
++W++L++R+ Q + + +L EI S+ QGN ++ YFT L+ LW E P+P CT
Sbjct: 61 SQIWNDLKKRYYQGDAFRISELLEEIYSLKQGNMSITHYFTTLQGLWQELDHFCPIPSCT 120
Query: 2640 CDAGKQWCDNDANVKLIQFLMGLNESFEQARSQVLMMDPLPDVNKAYSMILRIERQRSVH 2461
C + FL GLNE + RSQV++MDPLP V K +SMIL+ ER+
Sbjct: 121 CFTTR-------------FLKGLNEQYSNVRSQVMLMDPLPSVQKVFSMILQQERE---- 163
Query: 2460 QVFPEVLDNAAMLTHTXXXXXXXXXXXXXXXXXXGMRGRGVPHRTREEKSKLKCSYCHFN 2281
F DN + + +G R ++ +K+ CS+C
Sbjct: 164 --FHGTNDNQVLAVTSNNERNNY-------------KGSKTFKRNKDYNTKV-CSHCGRI 207
Query: 2280 GHEAHECFKLHGYPDWYKQFKDQRNAVVANMTNVEVPKEESQTVKKESNPDIAGLIQSEI 2101
GH C+K HG P +K + + N + Q+V E D QS
Sbjct: 208 GHLVDSCYKKHGPPLQHKHGR------IVN---------QYQSVSDEDTDDD----QSVH 248
Query: 2100 AKYMATLGTGNVDNGANFAHFAGYTGIDASQFALSTFEPIGSGS*ILDTGASKHMCISPS 1921
++ + + +GN+ H A + S LS S I+DTGA+ H+C + +
Sbjct: 249 SQRVVSHNSGNMFTPEQ--HQALLALLQQSGMILSFPYSHNSDCWIIDTGATDHVCKNIN 306
Query: 1920 LLTDLTPIISPITVFLPDGTSKSVTHTGTARLSENLILTDVLLVPSFKYNLLSISQLTHT 1741
I PI + LP+G+ S +GT LS+ LTDVL +P+F +NL+S+S+L T
Sbjct: 307 FFQSYRRI-KPILIQLPNGSQVSTCVSGTVLLSKTCYLTDVLFIPNFHFNLISVSKLAKT 365
Query: 1740 SNFKCVFFPSHCVLQDLKTERVIATGKAVGKLYVLTTSPDPYCSSFSKFHIPCTSSSFLF 1561
+ F S C +Q + R+I + LY + +SP+ S CTS F +
Sbjct: 366 LSCTLTFSDSDCQIQANHSMRMIGAAELRAGLYAMVSSPE------SNVVHHCTSHFFTY 419
Query: 1560 TCNSVLDLWHKRLGHASSGTLSHLHFLKPFLNNCNQTQLKDCDICHLSKQHRQPFPLRTE 1381
DLWH RLGH S LS L P + CN+ L C+ICHL+K R PFP
Sbjct: 420 QS----DLWHLRLGHLSHDKLSALKGSYPEIQ-CNKISLP-CEICHLAKHKRLPFPDSLT 473
Query: 1380 CAGSVFELIHLDVWGPFHSGNLFSNTPYFLTLVDDHSRCTWTYLMSHKSQVPSLLEKFIL 1201
+ +VF+LIH+D+WGP ++F + YFLT+VDD SR TW + M +K + LL+ F+
Sbjct: 474 KSENVFDLIHVDIWGPLSVASIFGHK-YFLTIVDDKSRFTWIFFMKNKFETKLLLQNFVS 532
Query: 1200 MIKV*FDISIKAFRSDNGREFI-NQWCSELFKSHGILHQRSCAYTPQQNGVVERKHRHLL 1024
++ F +IK R+DNG EF+ W ++L GI+HQ SC TPQQNGVVERKH+H+L
Sbjct: 533 FVQTQFQQNIKTIRTDNGSEFLLKDWYAKL----GIVHQTSCVNTPQQNGVVERKHQHIL 588
Query: 1023 DTARALLFQSKLPIDFWPFSLLTTTYLINRLPSSLLHWKSPYEVLYGKAPDYTLLKPFGC 844
ARAL+FQS + FW +++ +LINRLP+ L SPY VLY + PD++ LK FGC
Sbjct: 589 SMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFLQQNSPYYVLYSEKPDFSHLKVFGC 648
Query: 843 TAFATNIFPHKGKFDPRAHKCIFLGYEIGMKGYRLYNLTTKKLLVTREVHFLEHEFP--- 673
AFA+ + ++ K +PR+ KC+FLGY G KG+ +Y+L T++ ++R+V F E+ FP
Sbjct: 649 LAFASTLSHNRTKLEPRSRKCMFLGYSSGTKGFIMYDLKTRETFISRDVQFYENIFPLQK 708
Query: 672 ------------SISPSPNTD-TPLP---HAXXXXXXXXXXXXSPPHXXXXXXXXXXXXX 541
I+ P T P+P H + P
Sbjct: 709 DFSIQSTDGPVVPIAQMPLTSCDPIPSHTHDNLDETEHEHNSSTLPMTNSSNSDQPNIEI 768
Query: 540 SLPIALRKPSRPSKLPAKLQDYVVYTTVDQLPPSVLTTQTTGHVSSYSISTFPYYISPCF 361
++P R R P LQDY ++ S T + Y IS + Y S +
Sbjct: 769 NIPEIRRTSQRVKNRPGYLQDYHCTLAASKVDQSSSTAR-------YPISDYLPYTS--Y 819
Query: 360 SPSYVAFLANVSKIQEPSTYAQAKCDPQWVEAMDRELEALEKNQTWEVTDLPPGKKAIGC 181
S +F++ +S I EP +Y A W EA+ EL+AL+K +TW +TDLPP K+A+GC
Sbjct: 820 SAVQQSFVSTISSIIEPRSYQDAINHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGC 879
Query: 180 KWVYKVKLNPDGIVERFKARLVAKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATLKGW 4
+WV+KVK + DG VER+KARLVAKG+ Q G+DY+D+FSPV ++ T+R +AIA W
Sbjct: 880 RWVFKVKYHADGSVERYKARLVAKGFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNW 938
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 269 bits (687), Expect(3) = e-178
Identities = 133/288 (46%), Positives = 185/288 (64%)
Frame = -3
Query: 4783 GYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMSLP 4604
G HQE G+DY ++FSPVAK+ TVR +AIA WELHQ+D++NAFLHG L+E++YM LP
Sbjct: 737 GNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLP 796
Query: 4603 EGYSAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTPSSFL 4424
G+ VC L++SLYGLKQA R W ++ L +GF QS D+ LFT T + +
Sbjct: 797 PGFERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQI 856
Query: 4423 ALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQRKY 4244
+++YVDD++++G++ + KAYL + F +KDLG KYFLG+E+ R+++G +L QRKY
Sbjct: 857 NVLVYVDDLIISGNDSAALKTFKAYLSDCFKMKDLGVLKYFLGIEVARSSAGLFLCQRKY 916
Query: 4243 ILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPDITFS 4064
LDI++ GLLG KP P +L +G L P+ L +TRPD+ +S
Sbjct: 917 TLDIVSEAGLLGAKPCGFPIEQNHRLXLANGELLSNPESYRRLVGRLIYLAVTRPDLAYS 976
Query: 4063 VQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAYC 3920
V LSQFM P HW+AA+ ++ YLKG P QG+L ADS L L +C
Sbjct: 977 VHILSQFMXEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWC 1024
Score = 220 bits (561), Expect(3) = e-178
Identities = 126/327 (38%), Positives = 183/327 (55%), Gaps = 13/327 (3%)
Frame = -1
Query: 5730 TPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYEI 5551
TPQQNG VERKH+H+L+ RAL FQ+ LPI FW S+L A +LINR P+ LL K+P+EI
Sbjct: 417 TPQQNGRVERKHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFEI 476
Query: 5550 LYGKAPDYTLLKPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKKVI 5371
L+G P Y + FGC +FA + KF R+ KC+F+GY G KG++L++L TK++
Sbjct: 477 LFGTPPSYAAIHTFGCLSFAHDXKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELF 536
Query: 5370 ITREVYFLESEFPSVSLPHATDTPLPIPPSFDSSDSASIPVSDPPISTPLAFSTPIAIRK 5191
++R+V F E FP + P I P+ ++S P+S P P + +
Sbjct: 537 VSRDVKFFEDVFPFGNPGAVNIIPENIVPT-----ASSAPLSPGPEVVPTVGLDSLGLDN 591
Query: 5190 PHRSSKLPA------KF-----QDYVVYTAVDQLP-PGTITPHATGCAPSYPLSTFPYYI 5047
P KF +D+V +T V + P P T P P YP++ +YI
Sbjct: 592 SSNGQSAPMGKGMRDKFPSVLLRDFVTHTVVAESPSPATPXPQHPSGTP-YPIA---HYI 647
Query: 5046 S-PCFSASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKNQTWVVTDLPPGK 4870
+ FS Y FLA + +P ++ +A D W ++M E+ ALE+N TW + LP GK
Sbjct: 648 NCDNFSVHYRKFLATIISSNDPKSFKEAMKDVGWQKSMHEEIRALEENGTWTLEPLPKGK 707
Query: 4869 KAIGCKWVYKVKLNLDGTVERFKARLV 4789
+A+G +WVY+ K +G +ER K+RLV
Sbjct: 708 RALGSQWVYRTKYFSNGDIERLKSRLV 734
Score = 189 bits (480), Expect(3) = e-178
Identities = 88/152 (57%), Positives = 114/152 (75%)
Frame = -2
Query: 3920 CDADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLS 3741
CD+DWA+CP TRRS++G+ +FLG S +SWKTKKQ T+SRSSAEAEYRA++A CEL WL
Sbjct: 1024 CDSDWAACPVTRRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLK 1083
Query: 3740 YLAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KI 3561
L + + PK I L CD+Q+AL++ NPVFHERTKH+E+DCH VRD GL++P +
Sbjct: 1084 GLLLSLGVHHPKAIKLFCDSQSALHMAKNPVFHERTKHIEVDCHFVRDAITDGLIAPSYV 1143
Query: 3560 GSSLQLADLFTKALGPGIFTTLLSKLGMQDLH 3465
+ QLAD+FTKALG F LL+KLG+ + H
Sbjct: 1144 PTVTQLADIFTKALGKKQFDYLLAKLGIFEPH 1175
Score = 406 bits (1044), Expect = e-115
Identities = 252/658 (38%), Positives = 346/658 (52%), Gaps = 3/658 (0%)
Frame = -1
Query: 1965 ILDTGASKHMCISPSLLTDLTPIISPITVFLPDGTSKSVTHTGTARLSENLILTDVLLVP 1786
I+DTGA+ H+ S L D T + V LP+G S T +G+ RLS N+ L +VL VP
Sbjct: 139 IIDTGATHHVTGDLSWLFD-TIALFECPVGLPNGESVVATQSGSVRLSNNITLQNVLYVP 197
Query: 1785 SFKYNLLSISQLTHTSNFKCVFFPSHCVLQDLKTERVIATGKAVGKLYVLTTSPDPYCSS 1606
NLLS+SQLT + F C +QD T +I TG LY +
Sbjct: 198 KLNCNLLSVSQLTDDLHCIVQFNSYMCAIQD-HTRELIGTGVRRDGLYYFGGAEGD---- 252
Query: 1605 FSKFHIPCTSSSFLFTCNSVLDLWHKRLGHASSGTLSHLHFLKPFLNNCNQTQLKDCDIC 1426
S H+ +++ S L+LWHKR+GH S + L P ++N + K C+IC
Sbjct: 253 -SVQHVSVHNAA------STLELWHKRMGHPSEKVVK----LLPPVSNLKGSLNKACEIC 301
Query: 1425 HLSKQHRQPFPLRTECAGSVFELIHLDVWGPFHSGNLFSNTPYFLTLVDDHSRCTWTYLM 1246
+K R FPL A +FE IH D+WG + + YFLT+VDD SR W YL+
Sbjct: 302 FRAKHXRDKFPLSDNKATRIFEKIHCDLWGSYKHVSS-CGARYFLTIVDDFSRAVWIYLL 360
Query: 1245 SHKSQVPSLLEKFILMIKV*FDISIKAFRSDNGREFINQWCSELFKSHGILHQRSCAYTP 1066
K++V + FI M+ F ++K +SDNG EF + + F + GIL Q SC TP
Sbjct: 361 VDKTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEF--KCLLDYFSATGILFQTSCVGTP 418
Query: 1065 QQNGVVERKHRHLLDTARALLFQSKLPIDFWPFSLLTTTYLINRLPSSLLHWKSPYEVLY 886
QQNG VERKH+H+L+ RAL FQ+ LPI FW S+L +LINR PS LLH K+P+E+L+
Sbjct: 419 QQNGRVERKHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFEILF 478
Query: 885 GKAPDYTLLKPFGCTAFATNIFPHKGKFDPRAHKCIFLGYEIGMKGYRLYNLTTKKLLVT 706
G P Y + FGC +FA + KF R+ KC+FLGY G KG++L++L TK+L V+
Sbjct: 479 GTPPSYAAIHTFGCLSFAHDXKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVS 538
Query: 705 REVHFLEHEFPSISPSPNTDTP---LPHAXXXXXXXXXXXXSPPHXXXXXXXXXXXXXSL 535
R+V F E FP +P P +P A S
Sbjct: 539 RDVKFFEDVFPFGNPGAVNIIPENIVPTASSAPLSPGPEVVPTVGLDSLGLDNSSNGQSA 598
Query: 534 PIALRKPSRPSKLPAKLQDYVVYTTVDQLPPSVLTTQTTGHVSSYSISTFPYYISPCFSP 355
P+ K R L+D+V +T V + P T H S Y FS
Sbjct: 599 PMG--KGMRDKFPSVLLRDFVTHTVVAESPSP--ATPXPQHPSGTPYPIAHYINCDNFSV 654
Query: 354 SYVAFLANVSKIQEPSTYAQAKCDPQWVEAMDRELEALEKNQTWEVTDLPPGKKAIGCKW 175
Y FLA + +P ++ +A D W ++M E+ ALE+N TW + LP GK+A+G +W
Sbjct: 655 HYRKFLATIISSNDPKSFKEAMKDVGWQKSMHEEIRALEENGTWTLEPLPKGKRALGSQW 714
Query: 174 VYKVKLNPDGIVERFKARLVAKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATLKGWD 1
VY+ K +G +ER K+RLV G HQE G+DY ++FSPVAK+ TVR +AIA K W+
Sbjct: 715 VYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWE 772
>gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1115
Score = 268 bits (686), Expect(3) = e-177
Identities = 130/278 (46%), Positives = 186/278 (66%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMS 4610
+KGY Q G+DY ++FSPV K+ TVR ++A+A++N+W + Q+D++NAFLHG L ED+YM
Sbjct: 655 AKGYSQIEGIDYFETFSPVVKMTTVRVVLALASINQWHIQQLDVSNAFLHGDLLEDVYME 714
Query: 4609 LPEGYSAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTPSS 4430
LP+G + + C L++SLYGLKQ+SR+W + L++ G++Q+ DH LFTK+ S+
Sbjct: 715 LPQGLTGYSSSHSCKLRKSLYGLKQSSRKWYEKLSNLLLSNGYKQAHSDHSLFTKRHGSA 774
Query: 4429 FLALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQR 4250
F AL+IYVDD++LTG++ +I +K L F +KDLG KYFLG+E+ ++ G L QR
Sbjct: 775 FTALLIYVDDIVLTGNSAAEITRIKHILHSNFHVKDLGQLKYFLGIEVAHSSKGISLCQR 834
Query: 4249 KYILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPDIT 4070
KY LD+L+ G+LGCKP+ TP L+L + L +P L TRPDI
Sbjct: 835 KYCLDLLSDSGMLGCKPSSTPMDSTLRLHDDASGYLDDPLPYRRLVGRLVYLTNTRPDIA 894
Query: 4069 FSVQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLY 3956
FS QQLSQFM+ P ++H AA+ +L YLK CP GL +
Sbjct: 895 FSTQQLSQFMSKPTNAHHAAAMRVLRYLKSCPGTGLFF 932
Score = 210 bits (534), Expect(3) = e-177
Identities = 119/326 (36%), Positives = 189/326 (57%), Gaps = 9/326 (2%)
Frame = -1
Query: 5733 YTPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYE 5554
YTPQQNG VERKH+H+L+ ARAL+FQS+LP +FW +++ A +LINR+P+ ++ K+P+E
Sbjct: 343 YTPQQNGRVERKHQHILNVARALMFQSKLPSNFWSYAIKHAIFLINRVPSPIISHKTPFE 402
Query: 5553 ILYGKAPDYTLLKPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKKV 5374
+L PD+++LK FGC +A+ H + KF+PR+ K +F+G++ G KG+ + ++ T+++
Sbjct: 403 LLNKIPPDFSMLKVFGCLCYAST-HNQRHKFEPRSRKGIFMGFQNGTKGFVILDINTREI 461
Query: 5373 IITREVYFLESEFP----SVSLPHATDTPLPIPPSFDSSDSASIPVSDPPISTPLAFSTP 5206
+++R V F E+ FP + + P T L I P + D + P + P ++P P
Sbjct: 462 LVSRNVIFHETSFPFHTSAPTSPFITQPSLTISP---NPDILTTPPTSPNDTSPSQNPNP 518
Query: 5205 IAIRKPHRSSKLPAKFQDYVVYTAVDQLPPGT---ITPHATGCAPSY--PLSTFPYYISP 5041
A P + + F D ++ P T I PH +P+ P + P
Sbjct: 519 DASASPSSPAAPTSPFHD-----SISSYPTSTDFDIVPHHRSSSPAIPPPRRSERDIHPP 573
Query: 5040 CFSASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKNQTWVVTDLPPGKKAI 4861
+ + Y L ++ +Q T Q + W EAM EL+ALE N TW V + P + I
Sbjct: 574 PYLSEYQYKLPSLKSVQSSTRSIQ---NPCWREAMTCELKALELNHTWDVVETPSHVRPI 630
Query: 4860 GCKWVYKVKLNLDGTVERFKARLVAR 4783
GCKWV+K+K +G++ER+KARLVA+
Sbjct: 631 GCKWVFKIKRLPNGSIERYKARLVAK 656
Score = 197 bits (501), Expect(3) = e-177
Identities = 93/159 (58%), Positives = 123/159 (77%)
Frame = -2
Query: 3917 DADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLSY 3738
DADWA+C +RRS+TG+C F+G++L+SWKTKKQTT+SRSS+EAEYRAL++ CEL W+ Y
Sbjct: 945 DADWATCVASRRSITGYCFFIGNALISWKTKKQTTVSRSSSEAEYRALASATCELQWIIY 1004
Query: 3737 LAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KIG 3558
L D HIS+ + L CDN +AL+I ANPVFHERTKHL+IDCH+VR++ +AGL+ +
Sbjct: 1005 LLRDLHISLSQISLLYCDNTSALHIAANPVFHERTKHLDIDCHIVREKTQAGLMKLLPVP 1064
Query: 3557 SSLQLADLFTKALGPGIFTTLLSKLGMQDLHRCPT*GGV 3441
S+ QLAD+FTKAL P F LSKL +Q++ P GG+
Sbjct: 1065 SAKQLADIFTKALPPHAFKLNLSKLQLQNIFAPPACGGL 1103
Score = 402 bits (1034), Expect = e-114
Identities = 239/706 (33%), Positives = 381/706 (53%), Gaps = 14/706 (1%)
Frame = -1
Query: 2079 GTGNVDNGANFAHFAGYTGIDA-----SQFALSTFEPIGSGS*----ILDTGASKHMCIS 1927
G+ + AN +H D+ S F+++T + + S I+D+GA+ H+ S
Sbjct: 13 GSSETPSRANLSHSTPNQSHDSGLGSRSIFSINTTHTLNNLSHTTPWIIDSGATDHITTS 72
Query: 1926 PSLLTDLTPIISPITVFLPDGTSKSVTHTGTARLSENLILTDVLLVPSFKYNLLSISQLT 1747
L + I P+ + LP+G+ +G+ +LS + ++ DVL VP+F +NLLS+ +L
Sbjct: 73 IDLFFKYSEI-KPLNINLPNGSIVQAHFSGSIQLSPDFVIHDVLFVPNFSFNLLSLPKLL 131
Query: 1746 HTSNFKCVFFPSH----CVLQDLKTERVIATGKAVGKLYVLTTSPDPYCSSFSKFHIPCT 1579
T+ + +F C +QD+ T ++I + L+ L + S+ + P
Sbjct: 132 LTAPCRVIFSNQFSNILCQIQDMNTLKMIGSANLKEGLFHLDIGKERRSSTNNATATPIN 191
Query: 1578 SSSFLFTCNSVLDLWHKRLGHASSGTLSHLHFLKPFLNNCNQTQLKDCDICHLSKQHRQP 1399
+S+ LWH RLGH SS L+ L+ PF++ + + CD+CH +KQ +
Sbjct: 192 NSN----------LWHFRLGHLSSNRLNVLNQQFPFISKHSN---EVCDVCHFAKQKKLS 238
Query: 1398 FPLRTECAGSVFELIHLDVWGPFHSGNLFSNTPYFLTLVDDHSRCTWTYLMSHKSQVPSL 1219
+ + +F+LIH+D+WGPF ++ + YFLT++DD SR TW L+ KS+V +
Sbjct: 239 YSPSSSRVSKIFDLIHMDIWGPFSKASIHGHK-YFLTILDDFSRYTWVVLLKSKSEVKTH 297
Query: 1218 LEKFILMIKV*FDISIKAFRSDNGREFINQWCSELFKSHGILHQRSCAYTPQQNGVVERK 1039
+ FI +++ ++ +K RSDNG EF + + F S GI+HQ SC YTPQQNG VERK
Sbjct: 298 VHNFINLVENQYETKVKCIRSDNGPEF---FLRDFFNSKGIIHQTSCVYTPQQNGRVERK 354
Query: 1038 HRHLLDTARALLFQSKLPIDFWPFSLLTTTYLINRLPSSLLHWKSPYEVLYGKAPDYTLL 859
H+H+L+ ARAL+FQSKLP +FW +++ +LINR+PS ++ K+P+E+L PD+++L
Sbjct: 355 HQHILNVARALMFQSKLPSNFWSYAIKHAIFLINRVPSPIISHKTPFELLNKIPPDFSML 414
Query: 858 KPFGCTAFATNIFPHKGKFDPRAHKCIFLGYEIGMKGYRLYNLTTKKLLVTREVHFLEHE 679
K FGC +A+ + KF+PR+ K IF+G++ G KG+ + ++ T+++LV+R V F E
Sbjct: 415 KVFGCLCYAST-HNQRHKFEPRSRKGIFMGFQNGTKGFVILDINTREILVSRNVIFHETS 473
Query: 678 FPSISPSPNTDTPLPHAXXXXXXXXXXXXSPPHXXXXXXXXXXXXXSLPIALRKPSRP-S 502
FP + +P T + +PP + P+ P S
Sbjct: 474 FPFHTSAP-TSPFITQPSLTISPNPDILTTPPTSPNDTSPSQNPNPDASASPSSPAAPTS 532
Query: 501 KLPAKLQDYVVYTTVDQLPPSVLTTQTTGHVSSYSISTFPYYISPCFSPSYVAFLANVSK 322
+ Y T D +P ++ P P + Y L ++
Sbjct: 533 PFHDSISSYPTSTDFDIVPHHRSSSPAIPPPRRSERDIHP----PPYLSEYQYKLPSLKS 588
Query: 321 IQEPSTYAQAKCDPQWVEAMDRELEALEKNQTWEVTDLPPGKKAIGCKWVYKVKLNPDGI 142
+Q + Q C W EAM EL+ALE N TW+V + P + IGCKWV+K+K P+G
Sbjct: 589 VQSSTRSIQNPC---WREAMTCELKALELNHTWDVVETPSHVRPIGCKWVFKIKRLPNGS 645
Query: 141 VERFKARLVAKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATLKGW 4
+ER+KARLVAKGY Q G+DY ++FSPV K+ TVR ++A+A++ W
Sbjct: 646 IERYKARLVAKGYSQIEGIDYFETFSPVVKMTTVRVVLALASINQW 691
>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
Length = 1279
Score = 275 bits (704), Expect(3) = e-176
Identities = 153/338 (45%), Positives = 207/338 (61%), Gaps = 21/338 (6%)
Frame = -1
Query: 5733 YTPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYE 5554
YTPQQNGVVERKHRH+L++ARA FQ+ LP+ FW + TA ++INRLP LL ++P+E
Sbjct: 550 YTPQQNGVVERKHRHILESARAFRFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFE 609
Query: 5553 ILYGKAPDYTLLKPFGCAAFATNIH-PHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKK 5377
LYGK P Y+ ++ FGC A+ATN+H PH KF PRA +C+F+GY +G K Y+LY+L T +
Sbjct: 610 RLYGKLPSYSHIRVFGCLAYATNVHVPH--KFAPRAKRCIFLGYPVGQKAYKLYDLDTHQ 667
Query: 5376 VIITREVYFLESEFPSVSLPHATDTPLPIPPSFDSSDSASIPVSDPP--------ISTPL 5221
+ +R+V F E+ FP S+P + P+ P S S +P PP S P
Sbjct: 668 MFTSRDVVFHETIFPYESIPSPSSNSDPVIPLSISDLSPPVPQPSPPEPISPIQQPSLPN 727
Query: 5220 AFST----------PIAIRKPHRSSKLPAKFQDYVV--YTAVDQLPPGTITPHATGCAPS 5077
+ ST PI +R+ P +DYV T+ + LPP + +P
Sbjct: 728 SVSTQPSPASPPPEPI-LRRSQXPHHPPMALRDYVCNQVTSPNHLPPLSSSPQK---GTR 783
Query: 5076 YPLSTFPYYISPCFSASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKNQTW 4897
YPL F Y +S + +F A VS+ EPT+Y++ + +HW EAM EL ALE N TW
Sbjct: 784 YPLCNFVSYHR--YSPQHRSFTAAVSQDIEPTSYAEXASHSHWQEAMQSELAALEANHTW 841
Query: 4896 VVTDLPPGKKAIGCKWVYKVKLNLDGTVERFKARLVAR 4783
+T LPPGKK IGC+WVYK+K + DGT+ERFKARLVA+
Sbjct: 842 SLTSLPPGKKPIGCRWVYKIKRHSDGTIERFKARLVAK 879
Score = 203 bits (517), Expect(3) = e-176
Identities = 118/289 (40%), Positives = 158/289 (54%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMS 4610
+KGY Q G+DY D+FSP AK++TVR L+A+A W LHQ+D
Sbjct: 878 AKGYTQLEGIDYHDTFSPTAKMITVRCLLALAAAQNWSLHQLD----------------- 920
Query: 4609 LPEGYSAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTPSS 4430
QASRQW +F + A GF QS D+ LFT + S
Sbjct: 921 ------------------------QASRQWFAKFSTAIQAAGFVQSKADYSLFTCRKGKS 956
Query: 4429 FLALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQR 4250
F AL+IYVDD+L+TG++++ IVA+K +L F IKDLG KYFLG+E+ R+ G + QR
Sbjct: 957 FTALLIYVDDILITGNDVNAIVALKQFLHSHFRIKDLGDLKYFLGIEVSRSKKGISISQR 1016
Query: 4249 KYILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPDIT 4070
KY L+IL G LG KP + P KL SG L +P L +TRPDIT
Sbjct: 1017 KYTLEILKDGGFLGAKPVNFPMEQNTKL-SDSGELLKDPSQYRRLVGRLIYLTITRPDIT 1075
Query: 4069 FSVQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAY 3923
+SV LS+FM++P H +AA+ +L YLK P QGL + + + L L A+
Sbjct: 1076 YSVHVLSRFMHAPRRPHMEAALRVLRYLKNSPGQGLFFPSQNDLSLRAF 1124
Score = 194 bits (492), Expect(3) = e-176
Identities = 90/151 (59%), Positives = 114/151 (75%)
Frame = -2
Query: 3917 DADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLSY 3738
D+DWA CP +RRS TG+C+FLGSSL+SW+TK+Q T+S SSAEAEYRA++ T CEL WL
Sbjct: 1126 DSDWAGCPISRRSTTGYCVFLGSSLISWRTKRQKTVSLSSAEAEYRAMAGTCCELSWLRS 1185
Query: 3737 LAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KIG 3558
L D I PKP L CDN AAL+I ANPVFHERT+H+E+DCH +RD+ + G V I
Sbjct: 1186 LLKDLRILHPKPALLYCDNTAALHIAANPVFHERTRHIEMDCHFIRDKIQDGSVVTKHIA 1245
Query: 3557 SSLQLADLFTKALGPGIFTTLLSKLGMQDLH 3465
S+ QLAD+FTK LG F+T++ KLG+ D+H
Sbjct: 1246 STBQLADVFTKPLGKETFSTMIHKLGVLDIH 1276
Score = 313 bits (802), Expect = 9e-84
Identities = 176/389 (45%), Positives = 231/389 (59%), Gaps = 15/389 (3%)
Frame = -1
Query: 1125 CSELFKSHGILHQRSCAYTPQQNGVVERKHRHLLDTARALLFQSKLPIDFWPFSLLTTTY 946
C FK G +Q SC YTPQQNGVVERKHRH+L++ARA FQ+ LP+ FW + T +
Sbjct: 533 CGNFFKQKGTTYQHSCVYTPQQNGVVERKHRHILESARAFRFQAHLPLPFWAECVSTAVH 592
Query: 945 LINRLPSSLLHWKSPYEVLYGKAPDYTLLKPFGCTAFATNI-FPHKGKFDPRAHKCIFLG 769
+INRLP+ LL ++P+E LYGK P Y+ ++ FGC A+ATN+ PH KF PRA +CIFLG
Sbjct: 593 IINRLPTPLLSRQTPFERLYGKLPSYSHIRVFGCLAYATNVHVPH--KFAPRAKRCIFLG 650
Query: 768 YEIGMKGYRLYNLTTKKLLVTREVHFLEHEFP--SI-SPSPNTDTPLPHAXXXXXXXXXX 598
Y +G K Y+LY+L T ++ +R+V F E FP SI SPS N+D +P +
Sbjct: 651 YPVGQKAYKLYDLDTHQMFTSRDVVFHETIFPYESIPSPSSNSDPVIPLSISDLSPPVPQ 710
Query: 597 XXSP--------PHXXXXXXXXXXXXXSLP-IALRKPSRPSKLPAKLQDYVV--YTTVDQ 451
P P P LR+ P P L+DYV T+ +
Sbjct: 711 PSPPEPISPIQQPSLPNSVSTQPSPASPPPEPILRRSQXPHHPPMALRDYVCNQVTSPNH 770
Query: 450 LPPSVLTTQTTGHVSSYSISTFPYYISPCFSPSYVAFLANVSKIQEPSTYAQAKCDPQWV 271
LPP + Q + Y + F Y +SP + +F A VS+ EP++YA+ W
Sbjct: 771 LPPLSSSPQKG---TRYPLCNFVSYHR--YSPQHRSFTAAVSQDIEPTSYAEXASHSHWQ 825
Query: 270 EAMDRELEALEKNQTWEVTDLPPGKKAIGCKWVYKVKLNPDGIVERFKARLVAKGYHQEY 91
EAM EL ALE N TW +T LPPGKK IGC+WVYK+K + DG +ERFKARLVAKGY Q
Sbjct: 826 EAMQSELAALEANHTWSLTSLPPGKKPIGCRWVYKIKRHSDGTIERFKARLVAKGYTQLE 885
Query: 90 GVDYVDSFSPVAKLVTVRFLIAIATLKGW 4
G+DY D+FSP AK++TVR L+A+A + W
Sbjct: 886 GIDYHDTFSPTAKMITVRCLLALAAAQNW 914
Score = 284 bits (727), Expect = 2e-74
Identities = 183/518 (35%), Positives = 271/518 (52%), Gaps = 18/518 (3%)
Frame = -1
Query: 3135 LANQTVVKDGKL-AGDPLQLHGSDHPGMVLVTNQLNGNNYLPWRRSMLIALGAKTKLGFI 2959
+ Q GKL A +P LH SDHPGMVLV+ LNG+NY W R+M I+L AK+KLGFI
Sbjct: 1 MTEQQPSNGGKLDAANPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFI 60
Query: 2958 NGKLPKPDETSEDFE--KWQKTDFMVISWLLNSISRDIVDAFIYAQTSKELWDELEQRFG 2785
+G P T + E W+K + M++SW+LNS+S+D+ D+ I++ T++E+W++L RF
Sbjct: 61 DGTTTMPSATDKPDEHASWKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLXDRFS 120
Query: 2784 QCNGP*LYQLQREIASITQGNNTVIAYFTRLKRLWDE---YHSLVPMPHCTCDAGKQWCD 2614
Q N P ++ ++ +IA +TQ TV AY+TRLK+LWDE Y+ V C+C A
Sbjct: 121 QSNAPRIFXIEXDIACLTQDQMTVAAYYTRLKKLWDELGSYNDTV----CSCGA------ 170
Query: 2613 NDANVKLIQFLMGLNESFEQARSQVLMMDPLPDVNKAYSMILRIERQRSVHQVFPEVLDN 2434
+ +L+QFLMGLNES+ R Q+L+M+PLPDV KAYS I++ E+QRS+ E +N
Sbjct: 171 DHKRXRLMQFLMGLNESYNAIRGQILLMNPLPDVAKAYSSIVQEEKQRSLGAT-RETTEN 229
Query: 2433 AAMLTHTXXXXXXXXXXXXXXXXXXGMRGRGVPHRTREEKSK-LKCSYCHFNGHEAHECF 2257
+AM+ G+G R+ K L CSYC + H C+
Sbjct: 230 SAMVVQ-----------RAEPMALAVRHGQGSSSRSNPSNRKPLHCSYCDRDHHVRETCW 278
Query: 2256 KLHGYPDWYKQFKDQR-----------NAVVANMTNVEVPKEESQTVKKESNPDIAGLIQ 2110
KL+GYP + + R N+ ++ NV + + V +E GL
Sbjct: 279 KLNGYPPEHPKHASNRSNHGSTHFKRNNSHQSSANNV-----KERXVMQEVPSMTNGLSD 333
Query: 2109 SEIAKYMATLGTGNVDNGANFAHFAGYTGIDASQFALSTFEPIGSGS*ILDTGASKHMCI 1930
+I + ++ + N A +G+ + L I+D+GA+ H+
Sbjct: 334 LQIQQILSIMQGKGTTQSTNPKANAAASGLLQTLLHLHRL--------IIDSGATDHITS 385
Query: 1929 SPSLLTDLTPIISPITVFLPDGTSKSVTHTGTARLSENLILTDVLLVPSFKYNLLSISQL 1750
SP+LL + + V +P G +T G L+ L +VL VPSFK +L+S+S++
Sbjct: 386 SPTLLVNSSKNTFLPPVAMPSGEQAPITSIGNLPLNSXATLKNVLGVPSFKVDLMSVSRV 445
Query: 1749 THTSNFKCVFFPSHCVLQDLKTERVIATGKAVGKLYVL 1636
T N FFP C+LQDL T I G+ LY L
Sbjct: 446 TKDLNCSVTFFPHWCILQDLTTRTTIGLGEQRDGLYYL 483
>gb|KYP43329.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 952
Score = 251 bits (640), Expect(3) = e-171
Identities = 128/288 (44%), Positives = 177/288 (61%)
Frame = -3
Query: 4783 GYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMSLP 4604
G +Q G DY ++F+PVAK+V+VR +++A W+++Q+D++NAFLHG L+E++YM P
Sbjct: 511 GNNQIEGEDYNETFAPVAKMVSVRTFLSVAVAKGWDIYQLDVHNAFLHGDLEEEVYMHFP 570
Query: 4603 EGYSAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTPSSFL 4424
G+S + G C L+RSLYGLKQ+ R W + L+ FGFQQS D+ LFT F+
Sbjct: 571 PGFSVGSPGSACKLQRSLYGLKQSPRNWFAKLRDSLLNFGFQQSKADYTLFTFTRDQDFV 630
Query: 4423 ALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQRKY 4244
A++IYVDD+LL G+N VK +L F IKDLG KYFLG+E R++SG L QRK+
Sbjct: 631 AVLIYVDDILLAGNNKCACDQVKIHLSFCFKIKDLGKLKYFLGIEFARSSSGISLSQRKF 690
Query: 4243 ILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPDITFS 4064
DIL LLGCKP+ P KL G +P L +TR +++++
Sbjct: 691 ATDILHECRLLGCKPSDFPMDQNHKLALADGPAYNDPTRYRRLVGRLLYLAITRLELSYA 750
Query: 4063 VQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAYC 3920
V LSQF+ P H+DA + +L Y+KG P QGLL + LHL AYC
Sbjct: 751 VHTLSQFLQHPLQEHYDAVLRVLRYIKGNPGQGLLMRSTCDLHLRAYC 798
Score = 246 bits (629), Expect(3) = e-171
Identities = 136/331 (41%), Positives = 190/331 (57%), Gaps = 16/331 (4%)
Frame = -1
Query: 5733 YTPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYE 5554
YTPQQNG VER+HRH+L+ ARAL F LPID W +L+AT+LINR P LL K PYE
Sbjct: 183 YTPQQNGRVERRHRHILNVARALRFDGHLPIDLWGECILSATHLINRTPTKLLNGKCPYE 242
Query: 5553 ILYGKAPDYTLLKPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKKV 5374
+L+ P Y ++ GC +AT + KF R+ KC+F+GY KG++++NL TK++
Sbjct: 243 VLHDTPPSYDHIRVLGCLCYATVLPKPFDKFAARSQKCVFVGYPSNKKGWKVFNLDTKEI 302
Query: 5373 IITREVYFLESEFPSVSLPHATDTPLPIPPSFDS-----------SDSASIPVSDPP--- 5236
++R+V F E EFP S P +P PI P+ S S S P+ DP
Sbjct: 303 FVSRDVKFFEDEFPFAS-PTTNISPAPIHPTSTSMILYEPHDTRTSSSDVAPLPDPESVE 361
Query: 5235 --ISTPLAFSTPIAIRKPHRSSKLPAKFQDYVVYTAVDQLPPGTITPHATGCAPSYPLST 5062
S + + + +R+ RS + A +DY A T++ G YP+
Sbjct: 362 RGSSVDTSSPSSMPLRRTSRSHRPLAHLKDYYCRNATKPSSANTLSSIPLGIL--YPIEH 419
Query: 5061 FPYYISPCFSASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKNQTWVVTDL 4882
F + FS+ + FLA VS EP ++ +A D W +AM E++ALE N TWVVT L
Sbjct: 420 F--VTNHNFSSQHQKFLAAVSNTIEPRSFKEAMKDPLWQQAMKLEIQALEDNHTWVVTSL 477
Query: 4881 PPGKKAIGCKWVYKVKLNLDGTVERFKARLV 4789
PPGKKAI CKW++++K + DG++ER+KARLV
Sbjct: 478 PPGKKAIPCKWIFRIKYHSDGSIERYKARLV 508
Score = 159 bits (402), Expect(3) = e-171
Identities = 79/152 (51%), Positives = 102/152 (67%)
Frame = -2
Query: 3920 CDADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLS 3741
CD+DWASCP TRRS+T + I L S +SW +KKQ TISRSSAEAEYR ++ ELLW+
Sbjct: 798 CDSDWASCPITRRSITDYFITLDQSPISWISKKQHTISRSSAEAEYRPVATATSELLWIK 857
Query: 3740 YLAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KI 3561
D +S P+ L CD+Q +++I +NPVFHERTKH+E+DC VR+ + +S I
Sbjct: 858 AFLQDLGVSHSMPMTLYCDSQFSIHIASNPVFHERTKHIELDCLFVREHVMSKTISTRHI 917
Query: 3560 GSSLQLADLFTKALGPGIFTTLLSKLGMQDLH 3465
+ Q AD+ TKALG F LLSKLG+ LH
Sbjct: 918 RTDSQPADILTKALGRKQFQFLLSKLGISSLH 949
Score = 301 bits (771), Expect = 1e-81
Identities = 178/459 (38%), Positives = 249/459 (54%), Gaps = 20/459 (4%)
Frame = -1
Query: 1317 LFSNTPYFLTLVDDHSRCT--------WTYLMSHKSQVPSLLEKFILMIKV*FDISIKAF 1162
+F+N YFL D +R T W Y++ V +++ + K
Sbjct: 107 VFNNFNYFLQ--DLQTRRTIGQGIEHEWVYVLCQSISVNAIMVPLL-----------KGV 153
Query: 1161 RSDNGREFINQWCSELFKSHGILHQRSCAYTPQQNGVVERKHRHLLDTARALLFQSKLPI 982
++DNG EF++ F++ GI+ Q SC YTPQQNG VER+HRH+L+ ARAL F LPI
Sbjct: 154 QTDNGTEFVSTHLRSFFENRGIIRQLSCTYTPQQNGRVERRHRHILNVARALRFDGHLPI 213
Query: 981 DFWPFSLLTTTYLINRLPSSLLHWKSPYEVLYGKAPDYTLLKPFGCTAFATNIFPHKGKF 802
D W +L+ T+LINR P+ LL+ K PYEVL+ P Y ++ GC +AT + KF
Sbjct: 214 DLWGECILSATHLINRTPTKLLNGKCPYEVLHDTPPSYDHIRVLGCLCYATVLPKPFDKF 273
Query: 801 DPRAHKCIFLGYEIGMKGYRLYNLTTKKLLVTREVHFLEHEFPSISPSPN--------TD 646
R+ KC+F+GY KG++++NL TK++ V+R+V F E EFP SP+ N T
Sbjct: 274 AARSQKCVFVGYPSNKKGWKVFNLDTKEIFVSRDVKFFEDEFPFASPTTNISPAPIHPTS 333
Query: 645 TPL----PHAXXXXXXXXXXXXSPPHXXXXXXXXXXXXXSLPIALRKPSRPSKLPAKLQD 478
T + PH P S+P LR+ SR + A L+D
Sbjct: 334 TSMILYEPHDTRTSSSDVAPLPDPESVERGSSVDTSSPSSMP--LRRTSRSHRPLAHLKD 391
Query: 477 YVVYTTVDQLPPSVLTTQTTGHVSSYSISTFPYYISPCFSPSYVAFLANVSKIQEPSTYA 298
Y Y P S T + Y I F + FS + FLA VS EP ++
Sbjct: 392 Y--YCRNATKPSSANTLSSIPLGILYPIEHF--VTNHNFSSQHQKFLAAVSNTIEPRSFK 447
Query: 297 QAKCDPQWVEAMDRELEALEKNQTWEVTDLPPGKKAIGCKWVYKVKLNPDGIVERFKARL 118
+A DP W +AM E++ALE N TW VT LPPGKKAI CKW++++K + DG +ER+KARL
Sbjct: 448 EAMKDPLWQQAMKLEIQALEDNHTWVVTSLPPGKKAIPCKWIFRIKYHSDGSIERYKARL 507
Query: 117 VAKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATLKGWD 1
V G +Q G DY ++F+PVAK+V+VR +++A KGWD
Sbjct: 508 VIAGNNQIEGEDYNETFAPVAKMVSVRTFLSVAVAKGWD 546
Score = 73.6 bits (179), Expect = 3e-09
Identities = 46/113 (40%), Positives = 67/113 (59%)
Frame = -1
Query: 1965 ILDTGASKHMCISPSLLTDLTPIISPITVFLPDGTSKSVTHTGTARLSENLILTDVLLVP 1786
+LD+GAS+HM + SLL+++ I P ++ LP+G G RL+ L+LT+VL V
Sbjct: 28 LLDSGASQHMTGTVSLLSNIRTI-PPCSIGLPNGDGTLAIQCGDVRLTSLLLLTNVLYVL 86
Query: 1785 SFKYNLLSISQLTHTSNFKCVFFPSHCVLQDLKTERVIATGKAVGKLYVLTTS 1627
S NL+SISQ+ H+++ VF + LQDL+T R I G +YVL S
Sbjct: 87 SLTCNLISISQMLHSNDCMVVFNNFNYFLQDLQTRRTIGQGIEHEWVYVLCQS 139
>gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1445
Score = 558 bits (1439), Expect = e-167
Identities = 364/1067 (34%), Positives = 545/1067 (51%), Gaps = 37/1067 (3%)
Frame = -1
Query: 3093 DPLQLHGSDHPGMVLVTNQLNGNNYLPWRRSMLIALGAKTKLGFINGKLPKPDETSEDFE 2914
+PL LH ++P ++LVT L+ NN+ W+ ML+AL K K F+ G L P+ + +
Sbjct: 18 NPLFLHPGENPALILVTPLLSDNNFPQWKHDMLVALETKNKDQFVLGTLTCPNLSDPLHK 77
Query: 2913 KWQKTDFMVISWLLNSISRDIVDAFIYAQTSKELWDELEQRFGQCNGP*LYQLQREIASI 2734
W + + MV+SWL +S++ I + ++ +++ E+W +L RF + + LQ E+ +
Sbjct: 78 AWCRCNKMVMSWLAHSMTPSIRQSVMWIESASEIWRDLCDRFSHGDKFRIADLQEELQNC 137
Query: 2733 TQGNNTVIAYFTRLKRLWDEYHSLVPMPHCTCDAG---------KQWCDNDANVKLIQFL 2581
QG TV Y+TRL+ LW E + C+C ++ D+D +I+FL
Sbjct: 138 KQGELTVSQYYTRLRILWKELSIYRTVLACSCPVACSCGIFSKIQKERDDDC---VIKFL 194
Query: 2580 MGLNESFEQARSQVLMMDPLPDVNKAYSMILRIERQRSVHQVFPEVLDNAAMLTHTXXXX 2401
GLN+ F Q RSQV++M+P+P + + +S++L+ ER+ V P ++AA+ T
Sbjct: 195 RGLNDEFSQVRSQVMLMEPMPGLTRTFSLVLQQEREFG-GPVPPIPQESAALATFNDDSA 253
Query: 2400 XXXXXXXXXXXXXXGMRGRGVPHRTREE-KSKLKCSYCHFNGHEAHECFKLHGYPDWYKQ 2224
RG G R +S C+ C H CF+++G+P Y+
Sbjct: 254 RNNSSTRGGFSNT---RGGGRSGRGNNTGRSTRFCTKCKKTNHTIDTCFQIYGFPPGYRT 310
Query: 2223 FKDQRNAVVANMTNVEVPKEESQTV---KKESNPDIAGLIQSEIAK--YMATLG----TG 2071
+ + +N + V +S T + D+ +K Y A LG +
Sbjct: 311 -NGKSTSTTSNTSKSSVNNFDSTTSLVSATSAKDDVTSQNTFNFSKDQYQALLGLLQQSQ 369
Query: 2070 NVDNGANFAHFAGYTGIDASQFALSTFEPIGSGS*ILDTGASKHMCISPSLLTDLTPIIS 1891
+ N AH + + F S ILD+GA+ H+C S S + L PI
Sbjct: 370 DPSPSVNSAHKCSVSTPGINLF---------QSSWILDSGATDHICPSKSYFSSLIPI-K 419
Query: 1890 PITVFLPDGTSKSVTHTGTARLSENLILTDVLLVPSFKYNLLSISQLTHTSNFKCVFFPS 1711
P++V LP+ S ++GT L NL L + L VP F +L+SI +L T N +F
Sbjct: 420 PVSVKLPNNQSVFACYSGTIHLG-NLTLYNALYVPDFSVHLISIPKLVTTLNCIVIFCEY 478
Query: 1710 HCVLQDLKTERVIATGKAVGKLYVLTTSPDPYCSSFSKFHIPCTS---SSFLFTCNSVLD 1540
C++ T ++I K L+ L D FS CT+ ++ ++
Sbjct: 479 DCIIVQRHTFKMIGAAKQQSGLFQLLQHNDSL--GFSTTGNNCTTVLATTLNDNFSNSTS 536
Query: 1539 LWHKRLGHASSGTLSHLHFLKPFLNNCNQTQLKD-----CDICHLSKQHRQPFPLRTECA 1375
+WH +LGH S+ L L + T +K CDIC +KQ + PFP T
Sbjct: 537 VWHAKLGHPSNKVLQTL--------SSQYTSIKFPLVHVCDICSFAKQKKLPFPDSTSIT 588
Query: 1374 GSVFELIHLDVWGPFHSGNLFSNTPYFLTLVDDHSRCTWTYLMSHKSQVPSLLEKFILMI 1195
FELIH+D+WGP ++ YFLT+VDD+SR TW +L+ K +V SLL FI++I
Sbjct: 589 NFFFELIHVDIWGPLAISSI-EGYKYFLTVVDDYSRFTWIHLLKSKQEVKSLLPNFIILI 647
Query: 1194 KV*FDISIKAFRSDNGREFINQWCSELFKSHGILHQRSCAYTPQQNGVVERKHRHLLDTA 1015
+ D +K RSDNG+EFI + + + GILH+ SC TPQQNG+VERKH+HLL+
Sbjct: 648 ENQHDCKLKRLRSDNGKEFI---LTNFYNAKGILHETSCVETPQQNGIVERKHQHLLNVC 704
Query: 1014 RALLFQSKLPIDFWPFSLLTTTYLINRLPSSLLHWKSPYEVLYGKAPDYTLLKPFGCTAF 835
RALLFQS++P FW +++ ++INRLP+ L KSP+E++Y PD L+ FGC A+
Sbjct: 705 RALLFQSQIPKTFWSYAIKHAVHIINRLPTRFLKQKSPFEMIYHHKPDLHDLRVFGCLAY 764
Query: 834 ATNIFPHKGKFDPRAHKCIFLGYEIGMKGYRLYNLTTKKLLVTREVHFLE--------HE 679
A+ + + K PRA KCIFLGY+ G KGY LYNL ++ ++R V F E H+
Sbjct: 765 ASTLAAGRTKLAPRASKCIFLGYKSGTKGYVLYNLHSRFFSLSRNVIFHETVFPYSDFHK 824
Query: 678 FPSISPSPNTDTPLPHAXXXXXXXXXXXXSPPHXXXXXXXXXXXXXS--LPIALRKPSRP 505
F S S + T++ A + H +P+ R +R
Sbjct: 825 FSSNSDAILTESTNDFAHYELYPITVLETTNTHTPSEQLQQPLTEEMQDIPVQPRVSTRQ 884
Query: 504 SKLPAKLQDYVVYTTVDQLPPSVLTTQTTGHVSSYSISTFPYYISPCFSPSYVAFLANVS 325
P L Y Y+ ++ Y + ++ Y + C S +Y AF ++S
Sbjct: 885 KFRPNYLNQYHCYSAT-----------SSNSACLYPLHSYLSY-NKC-SSNYTAFCLSIS 931
Query: 324 KIQEPSTYAQAKCDPQWVEAMDRELEALEKNQTWEVTDLPPGKKAIGCKWVYKVKLNPDG 145
EPS YAQA W +AM EL+AL +N+TW + LPPG+K IGCKWVY++K DG
Sbjct: 932 AHVEPSNYAQAITQDCWKQAMMTELDALNRNRTWSLVSLPPGRKLIGCKWVYRIKYKADG 991
Query: 144 IVERFKARLVAKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATLKGW 4
V+R KARLVAKG+ Q G+DY ++FSPVAKL TVRFL+A+A+ W
Sbjct: 992 SVDRHKARLVAKGFTQTEGIDYFETFSPVAKLTTVRFLLALASTNNW 1038
Score = 285 bits (730), Expect(2) = e-121
Identities = 142/289 (49%), Positives = 193/289 (66%)
Frame = -3
Query: 4789 SKGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMS 4610
+KG+ Q G+DY ++FSPVAKL TVRFL+A+A+ N W LHQ+D++NAFLHG L+E++YM
Sbjct: 1002 AKGFTQTEGIDYFETFSPVAKLTTVRFLLALASTNNWFLHQLDVDNAFLHGDLEEEVYMR 1061
Query: 4609 LPEGYSAQAKGKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTPSS 4430
P+G VC L++SLYGLKQASR WN + +L+ G++QS DH LF K+ SS
Sbjct: 1062 PPQGLQLPDSKLVCKLEKSLYGLKQASRNWNQKLNSELLHLGYKQSSADHSLFIKKQGSS 1121
Query: 4429 FLALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQR 4250
L++YVDDV+L+G+N +I VK +L + F IKDLG K+FLG+E+ R+ G L+QR
Sbjct: 1122 ITILLVYVDDVVLSGNNFSEIQIVKQHLHQKFQIKDLGPLKFFLGLEVARSKKGIILNQR 1181
Query: 4249 KYILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPDIT 4070
KY L+++ GLLG KPA TP P +KL GS L +P L TRPDI+
Sbjct: 1182 KYCLELIDESGLLGSKPAPTPADPAIKLHADHGSLLNDPTSFRRLIGRLLYLTNTRPDIS 1241
Query: 4069 FSVQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAY 3923
FSVQQLSQF++ P H AA+ ++ YLKG P GL Y A++ L + A+
Sbjct: 1242 FSVQQLSQFVSQPREPHLQAALRIVRYLKGAPGLGLFYPAENHLRIQAF 1290
Score = 181 bits (460), Expect(2) = e-121
Identities = 81/151 (53%), Positives = 114/151 (75%)
Frame = -2
Query: 3917 DADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLSY 3738
D+DWA+C TTR+SVTG+C+FLG SL+SWK+KKQ+T+SRSS+EAEYRAL++ CEL WL +
Sbjct: 1292 DSDWATCSTTRKSVTGYCVFLGKSLVSWKSKKQSTVSRSSSEAEYRALASLTCELQWLKF 1351
Query: 3737 LAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KIG 3558
L+ + IP P + D+Q+A+ I NP FHERTKH+E+DCHL+R + + L+ +
Sbjct: 1352 LSDSLFVKIPAPFSVFSDSQSAIQIAKNPTFHERTKHIEVDCHLIRIKLQEELLHLIHVP 1411
Query: 3557 SSLQLADLFTKALGPGIFTTLLSKLGMQDLH 3465
S+ QLAD FTK+L P +F +SKLG+ ++H
Sbjct: 1412 SANQLADAFTKSLYPKLFLHAISKLGLSNIH 1442
Score = 223 bits (568), Expect = 5e-55
Identities = 130/344 (37%), Positives = 188/344 (54%), Gaps = 21/344 (6%)
Frame = -1
Query: 5730 TPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYEI 5551
TPQQNG+VERKH+HLL+ RALLFQS++P FW +++ A ++INRLP L KSP+E+
Sbjct: 686 TPQQNGIVERKHQHLLNVCRALLFQSQIPKTFWSYAIKHAVHIINRLPTRFLKQKSPFEM 745
Query: 5550 LYGKAPDYTLLKPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKKVI 5371
+Y PD L+ FGC A+A+ + + K PRA KC+F+GY+ G KGY LYNL ++
Sbjct: 746 IYHHKPDLHDLRVFGCLAYASTLAAGRTKLAPRASKCIFLGYKSGTKGYVLYNLHSRFFS 805
Query: 5370 ITREVYFLESEFP-----------SVSLPHATD----------TPLPIPPSFDSSDSASI 5254
++R V F E+ FP L +T+ T L + S+
Sbjct: 806 LSRNVIFHETVFPYSDFHKFSSNSDAILTESTNDFAHYELYPITVLETTNTHTPSEQLQQ 865
Query: 5253 PVSDPPISTPLAFSTPIAIRKPHRSSKLPAKFQDYVVYTAVDQLPPGTITPHATGCAPSY 5074
P+++ P+ R R P Y Y+A ++ A Y
Sbjct: 866 PLTEE------MQDIPVQPRVSTRQKFRPNYLNQYHCYSAT-----------SSNSACLY 908
Query: 5073 PLSTFPYYISPCFSASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKNQTWV 4894
PL ++ Y + C S++Y AF ++S EP+ Y+QA W +AM EL+AL +N+TW
Sbjct: 909 PLHSYLSY-NKC-SSNYTAFCLSISAHVEPSNYAQAITQDCWKQAMMTELDALNRNRTWS 966
Query: 4893 VTDLPPGKKAIGCKWVYKVKLNLDGTVERFKARLVARDIIKNMG 4762
+ LPPG+K IGCKWVY++K DG+V+R KARLVA+ + G
Sbjct: 967 LVSLPPGRKLIGCKWVYRIKYKADGSVDRHKARLVAKGFTQTEG 1010
>emb|CAN81715.1| hypothetical protein VITISV_032902 [Vitis vinifera]
Length = 848
Score = 270 bits (689), Expect(3) = e-166
Identities = 138/290 (47%), Positives = 179/290 (61%), Gaps = 2/290 (0%)
Frame = -3
Query: 4786 KGYHQEYGVDYVDSFSPVAKLVTVRFLIAIATMNRWELHQIDINNAFLHGFLDEDIYMSL 4607
KGY Q YG DY D+FSPVAK+ +VR L+++A M W L+Q+DI NA LHG L E++YM
Sbjct: 404 KGYTQVYGSDYGDTFSPVAKIASVRLLLSMAAMCSWPLYQLDIKNASLHGDLXEEVYMEQ 463
Query: 4606 PEGYSAQAK-GKVCHLKRSLYGLKQASRQWNTEFCGKLVAFGFQQSVHDHCLFTKQTP-S 4433
P G+ AQ + G VC L+RSLYGLKQ R W + F + FG +S DH +F
Sbjct: 464 PPGFVAQGESGLVCRLRRSLYGLKQXPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLG 523
Query: 4432 SFLALVIYVDDVLLTGSNLDDIVAVKAYLDELFTIKDLGSAKYFLGVEIVRTNSGTYLHQ 4253
+ LV+YVDD+++TGS+ D I +K +L F KDLG KYFLG+EI +++SG L Q
Sbjct: 524 QCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVXLSQ 583
Query: 4252 RKYILDILTHMGLLGCKPAHTPFPPGLKLQGGSGSPLIEPDXXXXXXXXXXXLNMTRPDI 4073
RKY LDIL G+L CKP TP P +KL G G PL +P L +TRPDI
Sbjct: 584 RKYALDILEETGMLDCKPVDTPMDPNVKLVXGQGEPLGDPGRYRRLVGKLNYLTITRPDI 643
Query: 4072 TFSVQQLSQFMNSPCSSHWDAAVHLL*YLKGCPSQGLLYAADSSLHLTAY 3923
+F V +SQF+ SPC SHWDA + +L Y+K P QG+LY + Y
Sbjct: 644 SFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTPGQGVLYENRGHTQVVGY 693
Score = 197 bits (502), Expect(3) = e-166
Identities = 127/325 (39%), Positives = 171/325 (52%), Gaps = 8/325 (2%)
Frame = -1
Query: 5733 YTPQQNGVVERKHRHLLDTARALLFQSRLPIDFWPFSLLTATYLINRLPNSLLLWKSPYE 5554
+TPQQNGV ERK+RHL++TAR LL S +P FW +LTA YLINR+P+S+L + P+
Sbjct: 90 HTPQQNGVAERKNRHLVETARTLLLHSHVPFRFWGDVVLTACYLINRMPSSVLHDQIPHS 149
Query: 5553 ILYGKAPDYTLL-KPFGCAAFATNIHPHKGKFDPRAHKCLFIGYEIGMKGYRLYNLTTKK 5377
+L+ P Y L + FGC F + P + K +A KCLF+GY KGYR Y+L T +
Sbjct: 150 LLFPDQPLYFLPPRVFGCTCFVHILTPGQDKLSAKAMKCLFLGYSRLQKGYRCYSLETHR 209
Query: 5376 VIITREVYFLESE----FPSVSLPHATDTPLPI--PPSFDSSDSASIPVSDPPISTPLAF 5215
I+ +V F E S SLP + P+PI PP + P I PL F
Sbjct: 210 YFISADVTFFEDSPXFSTTSESLPVSEVLPIPIVSPPEAMPPRPLQVYHRHPRIVAPLPF 269
Query: 5214 STPIAIRKPHRS-SKLPAKFQDYVVYTAVDQLPPGTITPHATGCAPSYPLSTFPYYISPC 5038
A P S S PA + AV + T PH P Y ++ SP
Sbjct: 270 PEAPADSLPIPSASPAPALPSPNDLPIAVRKGTRSTRNPH-----PIYNFLSYHRLSSP- 323
Query: 5037 FSASYVAFLANVSKIQEPTTYSQAKNDAHWVEAMDRELEALEKNQTWVVTDLPPGKKAIG 4858
Y AF++ +S + P + +A + W +AM E+ AL N TW + LPPGK +G
Sbjct: 324 ----YSAFVSAISSVSLPMSTHEALSHPGWRQAMVDEMAALHSNDTWDLVVLPPGKSTVG 379
Query: 4857 CKWVYKVKLNLDGTVERFKARLVAR 4783
C+WVY VK+ DG V+R KARLV +
Sbjct: 380 CRWVYAVKVGPDGQVDRLKARLVXK 404
Score = 172 bits (435), Expect(3) = e-166
Identities = 76/151 (50%), Positives = 110/151 (72%)
Frame = -2
Query: 3917 DADWASCPTTRRSVTGFCIFLGSSLLSWKTKKQTTISRSSAEAEYRALSATVCELLWLSY 3738
DADWA PT RRS +G+C+F+G +L+SWK+KKQ ++RSSAEAEYRA++ CEL+WL +
Sbjct: 695 DADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQDVVARSSAEAEYRAMALATCELIWLRH 754
Query: 3737 LAVDFHISIPKPIPLLCDNQAALYIVANPVFHERTKHLEIDCHLVRDQFKAGLVSP*KIG 3558
L + + + L+CDNQAAL+I +NPVFHERTKH+E+DCH +R++ +G V+ +
Sbjct: 755 LLQELRFGKDEQMKLICDNQAALHIASNPVFHERTKHIEVDCHFIREKIASGCVATSFVN 814
Query: 3557 SSLQLADLFTKALGPGIFTTLLSKLGMQDLH 3465
S+ QLAD+FTK+L + +KLG D++
Sbjct: 815 SNDQLADIFTKSLRGPRIKYICNKLGAYDVY 845
Score = 311 bits (798), Expect = 5e-86
Identities = 175/437 (40%), Positives = 245/437 (56%), Gaps = 5/437 (1%)
Frame = -1
Query: 1299 YFLTLVDDHSRCTWTYLMSHKSQVPSLLEKFILMIKV*FDISIKAFRSDNGREFINQWCS 1120
YF+T +DD+SRCTW +LM +++++ S+ +KF I+ F+ISI+ RSDN RE+ + +
Sbjct: 15 YFVTFIDDYSRCTWLFLMKNRAELFSIFQKFYTEIQTQFNISIRVLRSDNAREYFSAQFT 74
Query: 1119 ELFKSHGILHQRSCAYTPQQNGVVERKHRHLLDTARALLFQSKLPIDFWPFSLLTTTYLI 940
HGILHQ SCA+TPQQNGV ERK+RHL++TAR LL S +P FW +LT YLI
Sbjct: 75 SFMSHHGILHQSSCAHTPQQNGVAERKNRHLVETARTLLLHSHVPFRFWGDVVLTACYLI 134
Query: 939 NRLPSSLLHWKSPYEVLYGKAPDYTL-LKPFGCTAFATNIFPHKGKFDPRAHKCIFLGYE 763
NR+PSS+LH + P+ +L+ P Y L + FGCT F + P + K +A KC+FLGY
Sbjct: 135 NRMPSSVLHDQIPHSLLFPDQPLYFLPPRVFGCTCFVHILTPGQDKLSAKAMKCLFLGYS 194
Query: 762 IGMKGYRLYNLTTKKLLVTREVHFLEHE--FPSISPSPNTDTPLPHAXXXXXXXXXXXXS 589
KGYR Y+L T + ++ +V F E F + S S LP
Sbjct: 195 RLQKGYRCYSLETHRYFISADVTFFEDSPXFSTTSESLPVSEVLP-----IPIVSPPEAM 249
Query: 588 PPHXXXXXXXXXXXXXSLPIALRKPSRPSKLPAKLQDYVVYTTVDQLPPSVL--TTQTTG 415
PP LP P+ +P+ + + LP +V T T
Sbjct: 250 PPRPLQVYHRHPRIVAPLPFP-EAPADSLPIPS-ASPAPALPSPNDLPIAVRKGTRSTRN 307
Query: 414 HVSSYSISTFPYYISPCFSPSYVAFLANVSKIQEPSTYAQAKCDPQWVEAMDRELEALEK 235
Y+ ++ SP Y AF++ +S + P + +A P W +AM E+ AL
Sbjct: 308 PHPIYNFLSYHRLSSP-----YSAFVSAISSVSLPMSTHEALSHPGWRQAMVDEMAALHS 362
Query: 234 NQTWEVTDLPPGKKAIGCKWVYKVKLNPDGIVERFKARLVAKGYHQEYGVDYVDSFSPVA 55
N TW++ LPPGK +GC+WVY VK+ PDG V+R KARLV KGY Q YG DY D+FSPVA
Sbjct: 363 NDTWDLVVLPPGKSTVGCRWVYAVKVGPDGQVDRLKARLVXKGYTQVYGSDYGDTFSPVA 422
Query: 54 KLVTVRFLIAIATLKGW 4
K+ +VR L+++A + W
Sbjct: 423 KIASVRLLLSMAAMCSW 439