BLASTX nr result

ID: Rehmannia27_contig00034976 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00034976
         (865 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KMZ11300.1| hypothetical protein BHUM_04587c [Candidatus Burk...    59   7e-07
ref|XP_011620326.1| PREDICTED: uncharacterized protein LOC105420...    59   1e-06
gb|KND56555.1| hypothetical protein BVER_03567 [Candidatus Burkh...    59   1e-06
gb|KND53439.1| hypothetical protein BSCH_02615 [Candidatus Parab...    59   2e-06
ref|XP_013733613.1| PREDICTED: uncharacterized protein LOC106437...    59   3e-06
ref|XP_012490570.1| PREDICTED: uncharacterized protein LOC105803...    58   5e-06
ref|XP_009123582.1| PREDICTED: DNA-binding protein HEXBP-like [B...    54   1e-05

>gb|KMZ11300.1| hypothetical protein BHUM_04587c [Candidatus Burkholderia humilis]
          Length = 238

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
 Frame = +2

Query: 77  SSSNQAAERGKKIQKINHKMISDVEK---GKKPEVPMKLCSYCNRKGHELSQCWKKMGKC 247
           SS NQ     KK +K   K  S+ +    GK+ +   + C YC + GH+ S+CW+K+GKC
Sbjct: 162 SSENQTGTFRKKSRKDLGKQNSEEKTSRHGKRGQFQGQ-CHYCGKNGHKESKCWRKVGKC 220

Query: 248 LRCGNDQHQVRDC 286
           L CG+ +HQ R C
Sbjct: 221 LLCGSLEHQARQC 233


>ref|XP_011620326.1| PREDICTED: uncharacterized protein LOC105420009 [Amborella
           trichopoda]
          Length = 233

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
 Frame = +2

Query: 53  KTSDKFKPSSSNQAAERGKKI-------------QKINHKMISDVEKGKKPEVPMKLCSY 193
           +T  K KP+SS    ++ ++              QK      S++E G+ P     +CS+
Sbjct: 128 RTEGKLKPASSGNFRKKPQQFPKRDIRGRPYQRNQKAQKNFSSNLENGRLP-----ICSH 182

Query: 194 CNRKGHELSQCWKKMGKCLRCGNDQHQVRDCPI-RNNSQQTTKG 322
           C R  H  ++C+KK+ KCLRC    H V+D P+ +  ++  T+G
Sbjct: 183 CGRNNHTTTECYKKLDKCLRCDQSGHWVKDFPLTKTENRPKTQG 226


>gb|KND56555.1| hypothetical protein BVER_03567 [Candidatus Burkholderia
           verschuerenii]
          Length = 350

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
 Frame = +2

Query: 131 KMISDVEKG---KKPEVPMKLCSYCNRKGHELSQCWKKMGKCLRCGNDQHQVRDCP 289
           K +++V KG   KKP   + +C YCN+ GH  + CW+K  KCLRCG+  H++  CP
Sbjct: 21  KCLAEVGKGPAGKKPAASV-VCRYCNKPGHVEADCWRKSNKCLRCGSADHRILKCP 75


>gb|KND53439.1| hypothetical protein BSCH_02615 [Candidatus Paraburkholderia
           schumannianae]
          Length = 327

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 20/39 (51%), Positives = 26/39 (66%)
 Frame = +2

Query: 173 PMKLCSYCNRKGHELSQCWKKMGKCLRCGNDQHQVRDCP 289
           P  +CS+C + GH    CWKK  KC RCG+ +HQV +CP
Sbjct: 188 PANVCSFCGKSGHTADTCWKKGKKCFRCGSTEHQVAECP 226


>ref|XP_013733613.1| PREDICTED: uncharacterized protein LOC106437248, partial [Brassica
           napus]
          Length = 387

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 21/52 (40%), Positives = 33/52 (63%)
 Frame = +2

Query: 176 MKLCSYCNRKGHELSQCWKKMGKCLRCGNDQHQVRDCPIRNNSQQTTKGPRR 331
           + +C  CNR+     +CW+  G CLRCG+ +H+V+DCP+R +  Q  + P R
Sbjct: 265 LAICQLCNRR--HPGECWRFTGSCLRCGSSEHRVKDCPLRTDQMQALRSPGR 314


>ref|XP_012490570.1| PREDICTED: uncharacterized protein LOC105803109 [Gossypium
           raimondii]
          Length = 1107

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 27/79 (34%), Positives = 40/79 (50%)
 Frame = +2

Query: 80  SSNQAAERGKKIQKINHKMISDVEKGKKPEVPMKLCSYCNRKGHELSQCWKKMGKCLRCG 259
           S      RGK+I      + +   +G+ PE     C YC ++     +CWKK+G C RCG
Sbjct: 261 SDRDDRNRGKQITSSTSSVKAPPREGENPE-----CDYCGKR--HFGECWKKIGGCFRCG 313

Query: 260 NDQHQVRDCPIRNNSQQTT 316
           + +H V+DCP   +S   T
Sbjct: 314 STEHFVKDCPKTQSSTPAT 332


>ref|XP_009123582.1| PREDICTED: DNA-binding protein HEXBP-like [Brassica rapa]
          Length = 113

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
 Frame = +2

Query: 146 VEKGK----KPEVPMKLCSYCNRKGHELSQCWKKMGKCLRCGNDQHQVRDCPIRNNSQQT 313
           VE GK    KPE     C  C +  H L +CWK MG C+RCG+  H +RDCP  +++Q  
Sbjct: 43  VEGGKASSDKPE-----CPKCGK--HHLGECWKAMGACVRCGSMDHMIRDCPRPSSTQGQ 95

Query: 314 TKG 322
             G
Sbjct: 96  PSG 98


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