BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00034813
         (923 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AJE29370.1| putative gag protein [Coffea canephora]                108   2e-23
gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposo...    77   1e-12
gb|KYP61706.1| Retrovirus-related Pol polyprotein from transposo...    74   1e-11
ref|XP_010277638.1| PREDICTED: uncharacterized protein LOC104612...    70   1e-10
gb|KYP37021.1| Retrovirus-related Pol polyprotein from transposo...    71   2e-10
gb|KYP62384.1| Retrovirus-related Pol polyprotein from transposo...    70   2e-10
gb|KYP74267.1| Retrovirus-related Pol polyprotein from transposo...    68   2e-09
ref|XP_007034896.1| Uncharacterized protein TCM_020722 [Theobrom...    66   2e-09
ref|XP_007010124.1| Uncharacterized protein TCM_043452 [Theobrom...    64   9e-09
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]    65   2e-08
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo...    64   3e-08
gb|KYP36396.1| Retrovirus-related Pol polyprotein from transposo...    65   4e-08
ref|XP_007046118.1| Uncharacterized protein TCM_011728 [Theobrom...    62   4e-08
gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposo...    65   5e-08
gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposo...    64   5e-08
gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposo...    64   5e-08
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]    64   8e-08
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]         64   9e-08
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]    64   1e-07
gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposo...    63   1e-07

>gb|AJE29370.1| putative gag protein [Coffea canephora]
          Length = 433

 Score =  108 bits (271), Expect = 2e-23
 Identities = 59/123 (47%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
 Frame = -2

Query: 835 GIVCYRCREEGHM*RNCPWRKKXXXXXXXXXXXXGRWR-CLQVSASMDTSSRD*WILDSG 659
           GI C+ C E GH+ R CP +KK                  L +S   +TSSRD WILDSG
Sbjct: 229 GIQCFGCHEFGHIKRYCPHQKKNDENDYDGVAGYASGGDILTISKGNNTSSRDGWILDSG 288

Query: 658 CVMHVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDGVDHTLGGVV*FPKI 479
           CV HV SR+DYFD  Q ++AG + L +GSTC++ G GVVKIK+ +G   +LGGV   PK+
Sbjct: 289 CVSHVCSRLDYFDTLQRKKAGFMCLGDGSTCQVKGVGVVKIKMLNGEIRSLGGVAYVPKL 348

Query: 478 RMN 470
           R N
Sbjct: 349 RRN 351


>gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 364

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/126 (30%), Positives = 61/126 (48%)
 Frame = -2

Query: 829 VCYRCREEGHM*RNCPWRKKXXXXXXXXXXXXGRWRCLQVSASMDTSSRD*WILDSGCVM 650
           +C  C+E GH  ++CP +K                  +   A     S D WILDSGC  
Sbjct: 238 ICNYCKEPGHWKKDCPKKKGKPSAAVAKEESTSENELVLSIADQPQHSEDQWILDSGCSF 297

Query: 649 HVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDGVDHTLGGVV*FPKIRMN 470
           H+     +FD ++ +  G + + N + C+ IG G +KIK+ DG+  TL  V   P+++ N
Sbjct: 298 HMCPNRTWFDTYEKKSGGNVFMGNDAPCKTIGIGTIKIKMHDGITRTLTEVRHVPELKKN 357

Query: 469 PMESGR 452
            +  GR
Sbjct: 358 LISVGR 363


>gb|KYP61706.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 295

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/155 (27%), Positives = 75/155 (48%)
 Frame = -2

Query: 874 KEKVPAFHNSMGKGIVCYRCREEGHM*RNCPWRKKXXXXXXXXXXXXGRWRCLQVSASMD 695
           K+K  +   S GK   C+ C +EGH  ++CP R+                   +V A  D
Sbjct: 103 KQKKSSRSKSKGKNKRCFICDKEGHFKKDCPNRESA-----------------EVLAVTD 145

Query: 694 TSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDGVD 515
             +   WILDSGC  H+    D+F+ +     GT+ L N   C++IG G V++++ DG+D
Sbjct: 146 QDTHKEWILDSGCSFHMTPNKDWFETYNQVDGGTVLLGNNKACKVIGIGSVRLRMFDGMD 205

Query: 514 HTLGGVV*FPKIRMNPMESGRVRTLLIWHVQRTEG 410
             L  +   P++ +  +ES  ++   +  ++  +G
Sbjct: 206 RVLQDIRHVPELSVG-LESQVLQVRWLLDIRSDDG 239


>ref|XP_010277638.1| PREDICTED: uncharacterized protein LOC104612030 [Nelumbo nucifera]
          Length = 201

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 36/83 (43%), Positives = 50/83 (60%)
 Frame = -2

Query: 718 LQVSASMDTSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVK 539
           L VS  M   S + W+LD GC MH++ R +YFD FQ ++   +SL + STC ++  G +K
Sbjct: 12  LIVSEGMCYFSPNEWVLDFGCSMHIFFRKEYFDTFQERKTCVVSLGDESTCNIMSVGTMK 71

Query: 538 IKIGDGVDHTLGGVV*FPKIRMN 470
           IK+ D V HTLGG     K+  N
Sbjct: 72  IKMFDRVVHTLGGATYVSKMCRN 94


>gb|KYP37021.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 352

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 34/108 (31%), Positives = 52/108 (48%)
 Frame = -2

Query: 829 VCYRCREEGHM*RNCPWRKKXXXXXXXXXXXXGRWRCLQVSASMDTSSRD*WILDSGCVM 650
           +C  C+E GH  ++CP +K                  +   A     S D WILDSGC  
Sbjct: 238 ICNYCKEPGHWKKDCPKKKGKPSAAVAKEESTSENELVLSIADQPQHSEDQWILDSGCSF 297

Query: 649 HVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDGVDHTL 506
           H+     +FD ++ +  G + + N + C+ IG G +KIK+ DG+  TL
Sbjct: 298 HMCPNRTWFDTYEKKSGGNVFMGNDAPCKTIGIGTIKIKMHDGITRTL 345


>gb|KYP62384.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 254

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/108 (31%), Positives = 52/108 (48%)
 Frame = -2

Query: 829 VCYRCREEGHM*RNCPWRKKXXXXXXXXXXXXGRWRCLQVSASMDTSSRD*WILDSGCVM 650
           +C  C+E GH  ++CP +K                  +   A     S D WILDSGC  
Sbjct: 135 ICNYCKEPGHWKKDCPKKKGKPSIAVAKEESTSENELVLSIADHPQHSEDQWILDSGCSF 194

Query: 649 HVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDGVDHTL 506
           H+     +FD ++ +  G + + N + C+ IG G +KIK+ DG+  TL
Sbjct: 195 HMCPNRTWFDTYEKKSGGNVFMGNDAPCKTIGIGTIKIKMHDGIIRTL 242


>gb|KYP74267.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 411

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 37/125 (29%), Positives = 62/125 (49%)
 Frame = -2

Query: 838 KGIVCYRCREEGHM*RNCPWRKKXXXXXXXXXXXXGRWRCLQVSASMDTSSRD*WILDSG 659
           K I CY+C++ GH+ ++CP +                    + +  +  SS D  ++DSG
Sbjct: 113 KQIQCYKCQKVGHIMKHCPEKGAKESRIQETTYVVEALEEYESAGVLVASSDD--VMDSG 170

Query: 658 CVMHVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDGVDHTLGGVV*FPKI 479
           C  H++   DYF+  +L+  GT+ L N   CR+ G G V++K+ D  +  L  V   PK+
Sbjct: 171 CTYHMFPVKDYFETLELKEYGTVLLGNNKACRVQGIGAVRLKMFDNQEMLLQNVRYVPKL 230

Query: 478 RMNPM 464
           +   M
Sbjct: 231 KRKLM 235


>ref|XP_007034896.1| Uncharacterized protein TCM_020722 [Theobroma cacao]
           gi|508713925|gb|EOY05822.1| Uncharacterized protein
           TCM_020722 [Theobroma cacao]
          Length = 218

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
 Frame = -2

Query: 805 GHM*RNCPWRKKXXXXXXXXXXXXGRWR-CLQVSASMDTSSRD*WILDSGCVMHVYSRID 629
           GH+ R+CP +               +   C  ++ S D  +   W LDS    H+  + D
Sbjct: 5   GHIKRDCPTKDDESNENKGECAFVAKGNDCDVLTISEDMDANFDWYLDSASATHICYQKD 64

Query: 628 YFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDGVDHTLGGVV*FPKIRMN 470
            FDL Q   AG L+L N S  +++G  VVKIK+ DGV  +LGGV   PK+R N
Sbjct: 65  CFDLLQEGMAGNLTLGNKSIVKVMGLAVVKIKMFDGVVLSLGGVAYVPKMRKN 117


>ref|XP_007010124.1| Uncharacterized protein TCM_043452 [Theobroma cacao]
           gi|508727037|gb|EOY18934.1| Uncharacterized protein
           TCM_043452 [Theobroma cacao]
          Length = 166

 Score = 63.5 bits (153), Expect = 9e-09
 Identities = 36/77 (46%), Positives = 46/77 (59%)
 Frame = -2

Query: 700 MDTSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDG 521
           MD +S   W LDS    H+  + D FDL Q    G L+L N S  +++G GVVKIK+ DG
Sbjct: 1   MDANSY--WYLDSASATHICYQKDCFDLLQEVVVGNLTLGNKSIVKVMGIGVVKIKMFDG 58

Query: 520 VDHTLGGVV*FPKIRMN 470
           V  +LGGV   PK+R N
Sbjct: 59  VVRSLGGVAYVPKMRKN 75


>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
          Length = 344

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
 Frame = -2

Query: 826 CYRCREEGHM*RNCPWRK----KXXXXXXXXXXXXGRWRCLQVSASMDTSSRD*WILDSG 659
           C++C++EGH  +N P RK    K                   V     T+S D WILDSG
Sbjct: 181 CFKCKKEGHYVKNXPDRKGKENKRNYNSGDATFAKENSNTTDVLLVXVTNSDDEWILDSG 240

Query: 658 CVMHVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDGVDHTLGGVV*FPKI 479
           C  H+    D+F  +Q    G + + N   C+++G   ++IK+  G+  TL  V   PK+
Sbjct: 241 CSYHMSPNGDWFSTYQPIDGGKVLMGNKVACKVVGIHXIQIKMHGGIIRTLTNVRHVPKL 300

Query: 478 RMN 470
             N
Sbjct: 301 NKN 303


>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 337

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
 Frame = -2

Query: 826 CYRCREEGHM*RNCPWRKKXXXXXXXXXXXXG----RWRCLQVSASMDTSSRD*WILDSG 659
           CY C++EGH  + CP RKK                  +   +V +       + WILDSG
Sbjct: 227 CYYCKKEGHFRKECPERKKKNNGKYNDESDIAVVADGYESAEVLSISTKKHSEEWILDSG 286

Query: 658 CVMHVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDG 521
           C  H+   +++F  ++    G + + N   C +IG G +K+K+ DG
Sbjct: 287 CSFHMTPNLEWFSSYKEIDGGKVLMGNNMVCNVIGIGTIKLKVQDG 332


>gb|KYP36396.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 485

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
 Frame = -2

Query: 826 CYRCREEGHM*RNCPWR---KKXXXXXXXXXXXXGRWRCLQVSASMDTSSRD*WILDSGC 656
           C+ C + GH  +NCP R   +K              +    V     + ++  W++DSGC
Sbjct: 179 CFYCHKVGHFKKNCPERNRDQKSSADSADIAAISDGYESADVLVVTTSQTQKDWVMDSGC 238

Query: 655 VMHVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDGVDHTLGGVV*FPKIR 476
             H+  + DYF+  +L+  GT+ L +   C++ G G V++K+ D  ++ L  V   P ++
Sbjct: 239 SYHMCPKKDYFETLKLKEGGTVLLGDDHPCQVQGIGTVRLKMFDNREYILKDVRYVPDLK 298

Query: 475 MN 470
            N
Sbjct: 299 RN 300


>ref|XP_007046118.1| Uncharacterized protein TCM_011728 [Theobroma cacao]
           gi|508710053|gb|EOY01950.1| Uncharacterized protein
           TCM_011728 [Theobroma cacao]
          Length = 176

 Score = 62.0 bits (149), Expect = 4e-08
 Identities = 36/77 (46%), Positives = 46/77 (59%)
 Frame = -2

Query: 700 MDTSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDG 521
           MD +S   W LDS    H+  + D FDL Q   AG L+L N S  +++G  VVKIK+ DG
Sbjct: 1   MDANSD--WYLDSASATHICYQKDCFDLLQEGVAGNLTLGNKSIVKVMGIRVVKIKMFDG 58

Query: 520 VDHTLGGVV*FPKIRMN 470
           V  +LGGV   PK+R N
Sbjct: 59  VVRSLGGVAYVPKMRKN 75


>gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 780

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
 Frame = -2

Query: 826 CYRCREEGHM*RNCPWR---KKXXXXXXXXXXXXGRWRCLQVSASMDTSSRD*WILDSGC 656
           C+ C + GH  +NCP R   +K              +    V     + ++  W++DSGC
Sbjct: 233 CFYCHKVGHFKKNCPERNRDQKSSADSADIAAISDGYESADVLVVTTSQTQKDWVMDSGC 292

Query: 655 VMHVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDGVDHTLGGVV*FPKIR 476
             H+  + DYF+  +L+  GT+ L +   C++ G G V++K+ D  ++ L  V   P ++
Sbjct: 293 SYHMCPKKDYFETLKLKEGGTVLLGDDHPCQVQGIGTVRLKMFDNREYILKDVRYVPDLK 352

Query: 475 MN 470
            N
Sbjct: 353 RN 354


>gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 341

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
 Frame = -2

Query: 826 CYRCREEGHM*RNCPWRKKXXXXXXXXXXXXG------RWRCLQVSASMDTSSRD*WILD 665
           C+ C++EGH  RNCP  KK                       L VS++++    D WILD
Sbjct: 227 CHNCQKEGHWKRNCPELKKDKVSTSEFGGAAVVSEESDGGNVLFVSSNVND---DDWILD 283

Query: 664 SGCVMHVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDGVDHTLGGV 497
           S C  H+    D+F  FQ    G + + N   C + G G V+IK+ DG+  TL  V
Sbjct: 284 SACTFHMTPNRDWFATFQNVDGGKVLMGNDGACSIAGKGTVQIKMNDGIVRTLTDV 339


>gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 344

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
 Frame = -2

Query: 826 CYRCREEGHM*RNCPWRKKXXXXXXXXXXXXG------RWRCLQVSASMDTSSRD*WILD 665
           C+ C++EGH  RNCP  KK                       L VS++++    D WILD
Sbjct: 230 CHNCQKEGHWKRNCPELKKDKVSTSEFGGAAVVSEESDGGNVLFVSSNVND---DDWILD 286

Query: 664 SGCVMHVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDGVDHTLGGV 497
           S C  H+    D+F  FQ    G + + N   C + G G V+IK+ DG+  TL  V
Sbjct: 287 SACTFHMTPNRDWFATFQNVDGGKVLMGNDGACSIAGKGTVQIKMNDGIVRTLTDV 342


>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
          Length = 777

 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
 Frame = -2

Query: 907 NPIILQVESSPKE---KVPAFHNSMGK----GIVCYRCREEGHM*RNCPWRKKXXXXXXX 749
           N  +L ++SS K    K  +   S GK     + CY C + G + R CP R++       
Sbjct: 92  NAKVLDMKSSDKTNGGKSRSKSKSKGKKDYRNVKCYHCNKIGQIRRICPDRQQEEKTQAQ 151

Query: 748 XXXXXGR--WRCLQVSASMDTSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSLDNG 575
                    +   +V       + + W+LDSGC  H+  R D+F  +Q    G L L N 
Sbjct: 152 GSAAIIDDGYDSTEVLTIRLNPNHEEWVLDSGCTYHMCPRRDWFSSYQEVNGGKLLLGNN 211

Query: 574 STCRLIGFGVVKIKIGDGVDHTLGGVV*FPKIRMNPMESG 455
            +C ++G G + I + DG   TL  V   P ++ N +  G
Sbjct: 212 MSCNVVGIGTMAINMHDGKTRTLKEVRHVPDLKRNLISLG 251


>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
          Length = 478

 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
 Frame = -2

Query: 850 NSMGKGIVCYRCREEGHM*RNCPWRK-KXXXXXXXXXXXXGRWRC-LQVSASMDTSSRD* 677
           N   K + C+RC E GH+ R CP  K K                C L   +S  +   + 
Sbjct: 270 NKKKKMVKCFRCDEWGHIRRECPTLKGKAKANVATSSNDSDSDGCDLLTMSSAQSKDAEA 329

Query: 676 WILDSGCVMHVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDGVDHTLGGV 497
           WILDS    HV  R ++F  ++    G + L + ++   +G G VKIK+ DG +H L GV
Sbjct: 330 WILDSASSFHVTPRKEWFSSYKSGEFGFVYLGDDTSYPAVGVGEVKIKLEDGGEHVLQGV 389

Query: 496 V*FPKIRMNPMESG 455
              P ++ N +  G
Sbjct: 390 RHVPGLKRNLISLG 403


>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
          Length = 894

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 4/140 (2%)
 Frame = -2

Query: 847 SMGKGIVCYRCREEGHM*RNCPWRK----KXXXXXXXXXXXXGRWRCLQVSASMDTSSRD 680
           S  K   C+ C +EGH  ++CP  +    K              +    V    +  S  
Sbjct: 221 SKTKKFKCFICHKEGHFKKDCPDMRQNTXKKTMNEGDATMILDGYDNAGVLNVAEVDSGK 280

Query: 679 *WILDSGCVMHVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDGVDHTLGG 500
            WILDSGC  H+     +F+ F+    G + L N   C+++G G VKIK  DG++  L  
Sbjct: 281 EWILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILGTGTVKIKHYDGIERVLED 340

Query: 499 VV*FPKIRMNPMESGRVRTL 440
           +   P+++MN +  G +  L
Sbjct: 341 IRYIPELKMNLISLGMLDKL 360


>gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 507

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 2/131 (1%)
 Frame = -2

Query: 829 VCYRCREEGHM*RNCPWRKKXXXXXXXXXXXXGRWRCLQVSASMDTS--SRD*WILDSGC 656
           +C  C+E GH  ++CP +K+              +    V + +D    S + W+LDSGC
Sbjct: 135 ICNYCKEPGHWKKDCP-KKRNQKSVAVAAQEDSSFENELVLSIVDNHQHSAEQWVLDSGC 193

Query: 655 VMHVYSRIDYFDLFQLQRAGTLSLDNGSTCRLIGFGVVKIKIGDGVDHTLGGVV*FPKIR 476
             H+     +F  ++ +  G + + N   C+ IG G ++IK+ DGV  TL  V   P ++
Sbjct: 194 SYHMCPNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMHDGVIRTLTEVRHVPDLK 253

Query: 475 MNPMESGRVRT 443
            N +  G + T
Sbjct: 254 KNLISVGVLHT 264