BLASTX nr result
ID: Rehmannia27_contig00033973
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00033973
(898 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABI54184.1| protein tyrosine phosphatase [Catharanthus roseus... 203 5e-61
sp|P20402.1|ROB1_AGRRH RecName: Full=Protein-tyrosine phosphatas... 201 2e-60
gb|ABS11824.1| hypothetical protein [Agrobacterium rhizogenes] 202 2e-60
sp|P49409.1|ROB2_AGRRH RecName: Full=Protein-tyrosine phosphatas... 197 9e-59
ref|WP_010900205.1| hypothetical protein [Agrobacterium rhizogen... 197 2e-58
ref|WP_042474767.1| hypothetical protein [Agrobacterium rhizogen... 192 5e-57
dbj|GAJ95533.1| hypothetical protein RRH01S_12_00900 [Rhizobium ... 192 8e-57
sp|P09178.1|ROLB_NICGL RecName: Full=Protein-tyrosine phosphatas... 189 2e-56
emb|CAA82552.1| ORF11 [Agrobacterium rhizogenes] gi|6706123|emb|... 191 6e-56
gb|ACH81986.1| RolB, partial [Agrobacterium rhizogenes] 184 5e-54
emb|CAM12505.1| rolB protein [Agrobacterium rhizogenes] 148 7e-43
ref|WP_034521025.1| hypothetical protein [Agrobacterium rhizogen... 119 3e-34
emb|CAA34077.1| unnamed protein product [Agrobacterium rhizogenes] 132 1e-33
sp|P15397.1|ROLT_AGRRH RecName: Full=Protein RolB(TR) [Agrobacte... 132 2e-33
ref|WP_034520979.1| hypothetical protein [Agrobacterium rhizogenes] 110 1e-26
gb|AIM47586.1| RolB/RolC [Ipomoea batatas] 100 1e-21
ref|WP_034521028.1| hypothetical protein [Agrobacterium rhizogen... 91 7e-17
gb|ABI54188.1| hypothetical protein [Catharanthus roseus] 91 7e-17
emb|CAB65893.1| hypotethical protein, homologous to ORF8 of pRiA... 70 2e-10
ref|WP_010900203.1| hypothetical protein [Agrobacterium rhizogen... 70 2e-10
>gb|ABI54184.1| protein tyrosine phosphatase [Catharanthus roseus]
gi|114199210|gb|ABI54190.1| tyrosine phosphatase RolB
[Catharanthus roseus]
Length = 259
Score = 203 bits (516), Expect = 5e-61
Identities = 102/187 (54%), Positives = 131/187 (70%)
Frame = -3
Query: 896 DTILAFVPRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDED 717
D L F+PRFQP DL WS++NL E +R AF IY+ YSK +++ Q WA V L E+
Sbjct: 2 DPKLLFLPRFQPVDLTPAWSQINLFEGIRFAFAIYSRDYSKPLLHFQKRWALAVLDLKEN 61
Query: 716 RPVNKQLKYIAELLENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFG 537
P LK +AELL+NK+CYH PMLV++PDLARE DQ VF+YL+REKM+KVL E+ +TFG
Sbjct: 62 SPPIYILKQLAELLKNKVCYHPPMLVSQPDLARENDQHVFVYLSREKMQKVLKEQSITFG 121
Query: 536 REPVLATTIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAIFAXXXXXXXXXHLAP 357
E VLATTIQPYRS+L++QEM+R HNL + T+E DLECFIAIFA
Sbjct: 122 MEAVLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLFIHLLELKVT 181
Query: 356 SLFGEEL 336
+++G E+
Sbjct: 182 NVYGREV 188
>sp|P20402.1|ROB1_AGRRH RecName: Full=Protein-tyrosine phosphatase RolB; Short=ROL B
protein [Agrobacterium rhizogenes]
gi|38987|emb|CAA27163.1| unnamed protein product
[Agrobacterium rhizogenes] gi|148912031|gb|ABR18542.1|
hypothetical protein [Catharanthus roseus]
Length = 259
Score = 201 bits (512), Expect = 2e-60
Identities = 101/187 (54%), Positives = 130/187 (69%)
Frame = -3
Query: 896 DTILAFVPRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDED 717
D L F+PRFQP DL WS++NL E +R AF IY+ YSK +++ Q WA V L E+
Sbjct: 2 DPKLLFLPRFQPVDLTPAWSQINLFEGIRFAFAIYSRDYSKPLLHFQKRWALAVLDLKEN 61
Query: 716 RPVNKQLKYIAELLENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFG 537
P LK +AELL+NK+CYH PM V++PDLARE DQ VF+YL+REKM+KVL E+ +TFG
Sbjct: 62 SPPIYILKQLAELLKNKVCYHPPMFVSQPDLARENDQHVFVYLSREKMQKVLKEQSITFG 121
Query: 536 REPVLATTIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAIFAXXXXXXXXXHLAP 357
E VLATTIQPYRS+L++QEM+R HNL + T+E DLECFIAIFA
Sbjct: 122 MEAVLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLFIHLLELKVT 181
Query: 356 SLFGEEL 336
+++G E+
Sbjct: 182 NVYGREV 188
>gb|ABS11824.1| hypothetical protein [Agrobacterium rhizogenes]
Length = 279
Score = 202 bits (513), Expect = 2e-60
Identities = 101/184 (54%), Positives = 131/184 (71%)
Frame = -3
Query: 887 LAFVPRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDEDRPV 708
L F+ RFQPRDL W+++NL E++ AF IY+ VYSKT+M+ Q WA GV L+E+RP
Sbjct: 22 LLFLQRFQPRDLTKAWNQLNLFNEIQFAFLIYSQVYSKTLMDFQKRWAQGVLDLEENRPP 81
Query: 707 NKQLKYIAELLENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFGREP 528
LK +A LL+NK+CYH PMLV +PDLARE D+ VF+YL+REKM+KVL E+ +TFG E
Sbjct: 82 VVILKQLAHLLKNKVCYHPPMLVDQPDLARENDRHVFVYLSREKMQKVLEEKSITFGLEA 141
Query: 527 VLATTIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAIFAXXXXXXXXXHLAPSLF 348
VLATT+QPYRSDL++QEMVRAHN+ +E DLE FIAIFA +++
Sbjct: 142 VLATTMQPYRSDLALQEMVRAHNIAWPHRRVEEPDLEGFIAIFASTLFIHLLELKVTNVY 201
Query: 347 GEEL 336
G E+
Sbjct: 202 GREV 205
>sp|P49409.1|ROB2_AGRRH RecName: Full=Protein-tyrosine phosphatase RolB; Short=ROL B
protein gi|468520|emb|CAA45540.1| rolB [Agrobacterium
rhizogenes]
Length = 262
Score = 197 bits (501), Expect = 9e-59
Identities = 99/182 (54%), Positives = 128/182 (70%)
Frame = -3
Query: 881 FVPRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDEDRPVNK 702
F+ RFQPRDL W+++NL +E++ AF IY+ VYSKT+M+ Q WA GV L+E+ P
Sbjct: 7 FLQRFQPRDLTKAWNQLNLFDEIQFAFLIYSQVYSKTLMDFQKRWAQGVLDLEENAPPVV 66
Query: 701 QLKYIAELLENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFGREPVL 522
LK +A LL+NK+CYH PMLV PDLARE D+ VF+YL+REKM+KVL E+ +TFG E VL
Sbjct: 67 ILKQLAHLLKNKVCYHPPMLVDHPDLARENDRHVFVYLSREKMQKVLEEKSITFGLEAVL 126
Query: 521 ATTIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAIFAXXXXXXXXXHLAPSLFGE 342
ATT+QPYRSDL +QEMVRAHN+ +E DLE FIAIFA +++G
Sbjct: 127 ATTMQPYRSDLVLQEMVRAHNIAWPHRRVEEPDLEGFIAIFASTLFIHLLELKVTNVYGR 186
Query: 341 EL 336
E+
Sbjct: 187 EV 188
>ref|WP_010900205.1| hypothetical protein [Agrobacterium rhizogenes]
gi|10954661|ref|NP_066596.1| riorf15 [Agrobacterium
rhizogenes] gi|2440227|dbj|BAA22335.1| hydrolyze
phytohormone glucoside [Agrobacterium rhizogenes]
gi|10567325|dbj|BAB16134.1| riorf15 [Agrobacterium
rhizogenes] gi|742096|prf||2009229C rolB gene
Length = 279
Score = 197 bits (501), Expect = 2e-58
Identities = 99/182 (54%), Positives = 128/182 (70%)
Frame = -3
Query: 881 FVPRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDEDRPVNK 702
F+ RFQPRDL W+++NL +E++ AF IY+ VYSKT+M+ Q WA GV L+E+ P
Sbjct: 24 FLQRFQPRDLTKAWNQLNLFDEIQFAFLIYSQVYSKTLMDFQKRWAQGVLDLEENAPPVV 83
Query: 701 QLKYIAELLENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFGREPVL 522
LK +A LL+NK+CYH PMLV PDLARE D+ VF+YL+REKM+KVL E+ +TFG E VL
Sbjct: 84 ILKQLAHLLKNKVCYHPPMLVDHPDLARENDRHVFVYLSREKMQKVLEEKSITFGLEAVL 143
Query: 521 ATTIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAIFAXXXXXXXXXHLAPSLFGE 342
ATT+QPYRSDL +QEMVRAHN+ +E DLE FIAIFA +++G
Sbjct: 144 ATTMQPYRSDLVLQEMVRAHNIAWPHRRVEEPDLEGFIAIFASTLFIHLLELKVTNVYGR 203
Query: 341 EL 336
E+
Sbjct: 204 EV 205
>ref|WP_042474767.1| hypothetical protein [Agrobacterium rhizogenes]
gi|142247|gb|AAA22095.1| ORF11 [Agrobacterium
rhizogenes]
Length = 254
Score = 192 bits (489), Expect = 5e-57
Identities = 93/185 (50%), Positives = 128/185 (69%)
Frame = -3
Query: 893 TILAFVPRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDEDR 714
T + F+PRF PR+L W+++NL EE+R AF Y+ VY KT+M Q WA V +L+E+
Sbjct: 3 THMHFLPRFYPRNLTQAWNQINLCEEIRFAFITYSQVYGKTLMEYQKGWARDVLELEENS 62
Query: 713 PVNKQLKYIAELLENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFGR 534
P LK +A++L++++CYH PM V++PDLARE++Q VF+YL+REKM+KVL E+ +TFG
Sbjct: 63 PPVNILKQLAQILKDQLCYHRPMFVSQPDLAREREQHVFVYLSREKMQKVLREQSITFGM 122
Query: 533 EPVLATTIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAIFAXXXXXXXXXHLAPS 354
E V+ATTIQPYR DLSV+ ++ AHNL +SDLECFIAIFA +
Sbjct: 123 EAVVATTIQPYRCDLSVKALLHAHNLAWPLRRMVKSDLECFIAIFASTLFVHLLEAKLTN 182
Query: 353 LFGEE 339
L+G E
Sbjct: 183 LYGRE 187
>dbj|GAJ95533.1| hypothetical protein RRH01S_12_00900 [Rhizobium rhizogenes NBRC
13257]
Length = 250
Score = 192 bits (487), Expect = 8e-57
Identities = 92/181 (50%), Positives = 126/181 (69%)
Frame = -3
Query: 881 FVPRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDEDRPVNK 702
F+PRF PR+L W+++NL EE+R AF Y+ VY KT+M Q WA V +L+E+ P
Sbjct: 3 FLPRFYPRNLTQAWNQINLCEEIRFAFITYSQVYGKTLMEYQKGWARDVLELEENSPPVN 62
Query: 701 QLKYIAELLENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFGREPVL 522
LK +A++L++++CYH PM V++PDLARE++Q VF+YL+REKM+KVL E+ +TFG E V+
Sbjct: 63 ILKQLAQILKDQLCYHRPMFVSQPDLAREREQHVFVYLSREKMQKVLREQSITFGMEAVV 122
Query: 521 ATTIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAIFAXXXXXXXXXHLAPSLFGE 342
ATTIQPYR DLSV+ ++ AHNL +SDLECFIAIFA +L+G
Sbjct: 123 ATTIQPYRCDLSVKALLHAHNLAWPLRRMVKSDLECFIAIFASTLFVHLLEAKLTNLYGR 182
Query: 341 E 339
E
Sbjct: 183 E 183
>sp|P09178.1|ROLB_NICGL RecName: Full=Protein-tyrosine phosphatase rolB; Short=Protein ROL
B [Nicotiana glauca] gi|19678|emb|CAA27161.1| unnamed
protein product [Nicotiana glauca]
gi|224900|prf||1203376B gene rolB
Length = 211
Score = 189 bits (481), Expect = 2e-56
Identities = 97/182 (53%), Positives = 126/182 (69%)
Frame = -3
Query: 881 FVPRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDEDRPVNK 702
F PRFQPR+L ++NL +E++ AF Y++VYSKT+++ Q WA +F L+E
Sbjct: 7 FHPRFQPRNLTPAGKQINLSKEIQSAFMTYSEVYSKTLLDYQKRWADVIFDLEEKSLRMD 66
Query: 701 QLKYIAELLENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFGREPVL 522
LK +AELL+NK+CYH PM V +PDLARE+DQ+VFIYL+REKM+KVL E+ +T G E VL
Sbjct: 67 ILKQLAELLKNKICYHPPMFVEQPDLARERDQRVFIYLSREKMQKVLEEQSITVGMEAVL 126
Query: 521 ATTIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAIFAXXXXXXXXXHLAPSLFGE 342
ATTIQPYRSDL+VQEM+R HN +E DLECFIAIFA +L+G
Sbjct: 127 ATTIQPYRSDLAVQEMLRVHNRAWPHRRMEERDLECFIAIFASTLFIHLTTLKVTNLYGR 186
Query: 341 EL 336
E+
Sbjct: 187 EV 188
>emb|CAA82552.1| ORF11 [Agrobacterium rhizogenes] gi|6706123|emb|CAB65895.1|
hypotethical protein, homologous to ORF11 of pRiA4
[Agrobacterium rhizogenes]
Length = 279
Score = 191 bits (484), Expect = 6e-56
Identities = 97/184 (52%), Positives = 127/184 (69%)
Frame = -3
Query: 887 LAFVPRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDEDRPV 708
L F+ RFQPRDL W+++NL E++ AF IY+ VYSKT+M+ Q WA GV L+E+R
Sbjct: 22 LLFLQRFQPRDLTKAWNQLNLFNEIQFAFLIYSQVYSKTLMDFQKRWAQGVLDLEENRRR 81
Query: 707 NKQLKYIAELLENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFGREP 528
L +L+NK+CYH PMLV +PDLARE D+ VF+YL+REKM+KVL E+ +TFG E
Sbjct: 82 WSYLNNWPIVLKNKVCYHPPMLVDQPDLARENDRHVFVYLSREKMQKVLEEKSITFGLEA 141
Query: 527 VLATTIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAIFAXXXXXXXXXHLAPSLF 348
VLATT+QPYRSDL++QEMVRAHN+ +E DLE FIAIFA +++
Sbjct: 142 VLATTMQPYRSDLALQEMVRAHNIAWPHRRVEEPDLEGFIAIFASTLFIHLLELKVTNVY 201
Query: 347 GEEL 336
G E+
Sbjct: 202 GREV 205
>gb|ACH81986.1| RolB, partial [Agrobacterium rhizogenes]
Length = 233
Score = 184 bits (467), Expect = 5e-54
Identities = 92/173 (53%), Positives = 120/173 (69%)
Frame = -3
Query: 854 LNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDEDRPVNKQLKYIAELL 675
L WS++NL E +R AF IY+ YSK +++ Q WA V L E+ P LK +AELL
Sbjct: 1 LTPAWSQINLFEGIRFAFAIYSRDYSKPLLHFQKRWALAVLDLKENSPPIYILKQLAELL 60
Query: 674 ENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFGREPVLATTIQPYRS 495
+NK+CYH PM V++PDLARE DQ VF+YL+REKM+KVL E+ +TFG E VLATTIQPYRS
Sbjct: 61 KNKVCYHPPMFVSQPDLARENDQHVFVYLSREKMQKVLKEQSITFGMEAVLATTIQPYRS 120
Query: 494 DLSVQEMVRAHNLVTQFN*TKESDLECFIAIFAXXXXXXXXXHLAPSLFGEEL 336
+L++QEM+R HNL + T+E DLECFIAIFA +++G E+
Sbjct: 121 ELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLFIHLLELKVTNVYGREV 173
>emb|CAM12505.1| rolB protein [Agrobacterium rhizogenes]
Length = 180
Score = 148 bits (373), Expect(2) = 7e-43
Identities = 74/131 (56%), Positives = 95/131 (72%)
Frame = -3
Query: 728 LDEDRPVNKQLKYIAELLENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERC 549
L E+ P LK +AELL+NK+CYH PM V++PDLARE DQ VF+YL+REKM+KVL E+
Sbjct: 1 LKENSPPIYILKQLAELLKNKVCYHPPMFVSQPDLARENDQHVFVYLSREKMQKVLKEQS 60
Query: 548 VTFGREPVLATTIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAIFAXXXXXXXXX 369
+TFG E VLATTIQPYRS+L++QEM+R HNL + T+E DLECFIAIFA
Sbjct: 61 ITFGMEAVLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLFIHLLE 120
Query: 368 HLAPSLFGEEL 336
+++G E+
Sbjct: 121 LKVTNVYGREV 131
Score = 54.7 bits (130), Expect(2) = 7e-43
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -2
Query: 363 CTFFIRRGTENRDYDVVACGPTRFTNNA 280
CTFF+RRGTENR YDVVACG T+FT NA
Sbjct: 133 CTFFLRRGTENRPYDVVACGTTQFTKNA 160
>ref|WP_034521025.1| hypothetical protein [Agrobacterium rhizogenes]
gi|653177242|gb|KEA04442.1| hypothetical protein
CN09_19060 [Agrobacterium rhizogenes]
Length = 175
Score = 119 bits (298), Expect(2) = 3e-34
Identities = 59/104 (56%), Positives = 76/104 (73%)
Frame = -3
Query: 647 MLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFGREPVLATTIQPYRSDLSVQEMVR 468
M V++PDLARE DQ VF+YL+REKM+KVL E+ +TFG E VLATTIQPYRS+L++QEM+R
Sbjct: 1 MFVSQPDLARENDQHVFVYLSREKMQKVLKEQSITFGMEAVLATTIQPYRSELALQEMLR 60
Query: 467 AHNLVTQFN*TKESDLECFIAIFAXXXXXXXXXHLAPSLFGEEL 336
HNL + T+E DLECFIAIFA +++G E+
Sbjct: 61 VHNLAWPHSRTEEPDLECFIAIFASSLFIHLLELKVTNVYGREV 104
Score = 54.7 bits (130), Expect(2) = 3e-34
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -2
Query: 363 CTFFIRRGTENRDYDVVACGPTRFTNNA 280
CTFF+RRGTENR YDVVACG T+FT NA
Sbjct: 106 CTFFLRRGTENRPYDVVACGTTQFTKNA 133
>emb|CAA34077.1| unnamed protein product [Agrobacterium rhizogenes]
Length = 260
Score = 132 bits (332), Expect = 1e-33
Identities = 79/182 (43%), Positives = 109/182 (59%), Gaps = 2/182 (1%)
Frame = -3
Query: 875 PRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDEDR-PVNKQ 699
P F PR+L H LL EL+ AF Y + IM Q A+A V + E R PVN Q
Sbjct: 9 PYFPPRNLCHSQDATTLLRELQDAFDSYNQSFRGEIMRFQKAFAERVLNMVEARYPVN-Q 67
Query: 698 LKYIAELLENKMCYHAPMLVAEP-DLAREKDQQVFIYLNREKMEKVLYERCVTFGREPVL 522
LK AE+L K+CYH+P +P DLA E+ Q +FIY++ EK++++L+ R G E +
Sbjct: 68 LKINAEILTRKVCYHSP--AHDPLDLALERQQYLFIYVSCEKIQELLFNRRFLVGTEAAV 125
Query: 521 ATTIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAIFAXXXXXXXXXHLAPSLFGE 342
AT+IQPYRS+LS EM R HNL + TKESD++CF+AIF+ A ++G+
Sbjct: 126 ATSIQPYRSELSRGEMARVHNLAWRRRQTKESDMDCFVAIFSSTLFVSWYEARAVDIYGD 185
Query: 341 EL 336
E+
Sbjct: 186 EV 187
>sp|P15397.1|ROLT_AGRRH RecName: Full=Protein RolB(TR) [Agrobacterium rhizogenes]
gi|38972|emb|CAA34076.1| unnamed protein product
[Agrobacterium rhizogenes] gi|653177217|gb|KEA04417.1|
hypothetical protein CN09_18935 [Agrobacterium
rhizogenes]
Length = 274
Score = 132 bits (332), Expect = 2e-33
Identities = 79/182 (43%), Positives = 109/182 (59%), Gaps = 2/182 (1%)
Frame = -3
Query: 875 PRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDEDR-PVNKQ 699
P F PR+L H LL EL+ AF Y + IM Q A+A V + E R PVN Q
Sbjct: 23 PYFPPRNLCHSQDATTLLRELQDAFDSYNQSFRGEIMRFQKAFAERVLNMVEARYPVN-Q 81
Query: 698 LKYIAELLENKMCYHAPMLVAEP-DLAREKDQQVFIYLNREKMEKVLYERCVTFGREPVL 522
LK AE+L K+CYH+P +P DLA E+ Q +FIY++ EK++++L+ R G E +
Sbjct: 82 LKINAEILTRKVCYHSP--AHDPLDLALERQQYLFIYVSCEKIQELLFNRRFLVGTEAAV 139
Query: 521 ATTIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAIFAXXXXXXXXXHLAPSLFGE 342
AT+IQPYRS+LS EM R HNL + TKESD++CF+AIF+ A ++G+
Sbjct: 140 ATSIQPYRSELSRGEMARVHNLAWRRRQTKESDMDCFVAIFSSTLFVSWYEARAVDIYGD 199
Query: 341 EL 336
E+
Sbjct: 200 EV 201
>ref|WP_034520979.1| hypothetical protein [Agrobacterium rhizogenes]
Length = 216
Score = 110 bits (274), Expect(2) = 1e-26
Identities = 65/146 (44%), Positives = 92/146 (63%), Gaps = 2/146 (1%)
Frame = -3
Query: 767 MNCQMAWAAGVFQLDEDR-PVNKQLKYIAELLENKMCYHAPMLVAEP-DLAREKDQQVFI 594
M Q A+A V + E R PVN QLK AE+L K+CYH+P +P DLA E+ Q +FI
Sbjct: 1 MRFQKAFAERVLNMVEARYPVN-QLKINAEILTRKVCYHSP--AHDPLDLALERQQYLFI 57
Query: 593 YLNREKMEKVLYERCVTFGREPVLATTIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLEC 414
Y++ EK++++L+ R G E +AT+IQPYRS+LS EM R HNL + TKESD++C
Sbjct: 58 YVSCEKIQELLFNRRFLVGTEAAVATSIQPYRSELSRGEMARVHNLAWRRRQTKESDMDC 117
Query: 413 FIAIFAXXXXXXXXXHLAPSLFGEEL 336
F+AIF+ A ++G+E+
Sbjct: 118 FVAIFSSTLFVSWYEARAVDIYGDEV 143
Score = 38.1 bits (87), Expect(2) = 1e-26
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = -2
Query: 363 CTFFIRRGTENRDYDVVACGPTRFTNNA 280
C F IR+ T +RDYDVVA G T+F NA
Sbjct: 145 CPFLIRQATGDRDYDVVAYGFTKFAENA 172
>gb|AIM47586.1| RolB/RolC [Ipomoea batatas]
Length = 236
Score = 100 bits (248), Expect = 1e-21
Identities = 58/160 (36%), Positives = 77/160 (48%)
Frame = -3
Query: 875 PRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDEDRPVNKQL 696
P F PR H S+ NL E++ Y +Y M Q WA + P ++ L
Sbjct: 9 PWFAPRYFCHSESQANLSEDINFTISAYKTLYYNAAMQYQRIWAQEILDRPNTDPDSEAL 68
Query: 695 KYIAELLENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFGREPVLAT 516
K +AE+ K+CYH PDLARE D V++Y+ + V V G+ +LAT
Sbjct: 69 KDVAEICMLKLCYHPSPFHGFPDLAREVDLLVYVYVCPSEALNVAQNGYVAVGKSAILAT 128
Query: 515 TIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAIFA 396
TI PYRSDLS E++R HNL D +I IFA
Sbjct: 129 TIPPYRSDLSAHEVLRLHNLAWPRQRRSLVDFGGYIVIFA 168
>ref|WP_034521028.1| hypothetical protein [Agrobacterium rhizogenes]
gi|653177243|gb|KEA04443.1| hypothetical protein
CN09_19070 [Agrobacterium rhizogenes]
Length = 761
Score = 90.9 bits (224), Expect = 7e-17
Identities = 55/158 (34%), Positives = 86/158 (54%)
Frame = -3
Query: 875 PRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDEDRPVNKQL 696
PRF P + HP S VNL + AF Y D + + ++ Q +W VF D + +
Sbjct: 8 PRFTPFAVTHPRSGVNLNRAISQAFVCY-DQFCERLLRYQQSWTDWVF----DHGFAEAI 62
Query: 695 KYIAELLENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFGREPVLAT 516
+ +A + + C H P + A L + Q VFIY++ ++++ + +C+ + VLA
Sbjct: 63 EDVALVFQVAPCLHGPRIGALEVLIPRRTQ-VFIYMSNNQLQRFVAHQCIAQLGDAVLAC 121
Query: 515 TIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAI 402
I PY SDLS+QEM RAHN + T+ +D++CFIAI
Sbjct: 122 MIPPYASDLSLQEMARAHNRFCPGSYTRSADVQCFIAI 159
>gb|ABI54188.1| hypothetical protein [Catharanthus roseus]
Length = 761
Score = 90.9 bits (224), Expect = 7e-17
Identities = 55/158 (34%), Positives = 86/158 (54%)
Frame = -3
Query: 875 PRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDEDRPVNKQL 696
PRF P + HP S VNL + AF Y D + + ++ Q +W VF D + +
Sbjct: 8 PRFTPFAVTHPRSGVNLNRAISQAFVCY-DQFCERLLRYQQSWTDWVF----DHGFAEAI 62
Query: 695 KYIAELLENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFGREPVLAT 516
+ +A + + C H P + A L + Q VFIY++ ++++ + +C+ + VLA
Sbjct: 63 EDVALVFQVAPCLHGPRIGALEVLIPRRTQ-VFIYMSNNQLQRFVAHQCIAQLGDAVLAC 121
Query: 515 TIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAI 402
I PY SDLS+QEM RAHN + T+ +D++CFIAI
Sbjct: 122 MIPPYASDLSLQEMARAHNRFCPGSYTRSADVQCFIAI 159
>emb|CAB65893.1| hypotethical protein, homologous to ORF8 of pRiA4 [Agrobacterium
rhizogenes] gi|151427933|gb|ABS11822.1| hypothetical
protein [Agrobacterium rhizogenes]
Length = 780
Score = 70.5 bits (171), Expect(2) = 2e-10
Identities = 49/158 (31%), Positives = 76/158 (48%)
Frame = -3
Query: 875 PRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDEDRPVNKQL 696
PRF P + S L + AF Y D + ++ Q W VF D + +
Sbjct: 27 PRFPPFAITGLPSAAKLKRAISRAFVCY-DQFCDELLQYQQRWTDWVF----DHGFAEAI 81
Query: 695 KYIAELLENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFGREPVLAT 516
+ +A + + + C H P ++ R +VFIY + ++ + +C+ + VLA
Sbjct: 82 EDMALVFQIEPCLHGPR-TGTLEVLRSCRTKVFIYTSYRRLRHFVENQCIAQPGDAVLAC 140
Query: 515 TIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAI 402
I PY SDLS+QEM RAHN + T +D++CFIAI
Sbjct: 141 MIPPYVSDLSLQEMSRAHNSFCPGSHTSIADVQCFIAI 178
Score = 23.5 bits (49), Expect(2) = 2e-10
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 369 TPCTFFIRRGTENRDYDVVACGPTRFTN 286
T C FF R YD+VA G F N
Sbjct: 200 TTCRFFRRPAECFSRYDIVAIGSVLFHN 227
>ref|WP_010900203.1| hypothetical protein [Agrobacterium rhizogenes]
gi|10954659|ref|NP_066594.1| riorf13 [Agrobacterium
rhizogenes] gi|10567323|dbj|BAB16132.1| riorf13
[Agrobacterium rhizogenes]
Length = 761
Score = 70.1 bits (170), Expect(2) = 2e-10
Identities = 49/158 (31%), Positives = 76/158 (48%)
Frame = -3
Query: 875 PRFQPRDLNHPWSKVNLLEELRCAFGIYTDVYSKTIMNCQMAWAAGVFQLDEDRPVNKQL 696
PRF P + S L + AF Y D + ++ Q W VF D + +
Sbjct: 8 PRFPPFAITGLPSAAKLKRAISRAFVCY-DQFCDELLQYQQRWTDWVF----DHGFAEAI 62
Query: 695 KYIAELLENKMCYHAPMLVAEPDLAREKDQQVFIYLNREKMEKVLYERCVTFGREPVLAT 516
+ +A + + + C H P ++ R +VFIY + ++ + +C+ + VLA
Sbjct: 63 EDMALVFQIEPCLHGPR-TGTLEVLRPCRTKVFIYTSYRRLRHFVENQCIAQPGDAVLAC 121
Query: 515 TIQPYRSDLSVQEMVRAHNLVTQFN*TKESDLECFIAI 402
I PY SDLS+QEM RAHN + T +D++CFIAI
Sbjct: 122 MIPPYVSDLSLQEMSRAHNSFCPGSHTSIADVQCFIAI 159
Score = 23.5 bits (49), Expect(2) = 2e-10
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 369 TPCTFFIRRGTENRDYDVVACGPTRFTN 286
T C FF R YD+VA G F N
Sbjct: 181 TTCRFFRRPAECFSRYDIVAIGSVLFHN 208