BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00033644
         (1344 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP00431.1| unnamed protein product [Coffea canephora]             90   2e-36
ref|XP_009114067.1| PREDICTED: putative ribonuclease H protein A...   102   5e-33
ref|XP_012067552.1| PREDICTED: uncharacterized protein LOC105630...    97   7e-33
ref|XP_010666352.1| PREDICTED: uncharacterized protein LOC104883...    95   4e-32
ref|XP_008372934.1| PREDICTED: putative ribonuclease H protein A...    93   6e-32
ref|XP_009149305.1| PREDICTED: putative ribonuclease H protein A...    73   2e-31
ref|XP_009108245.1| PREDICTED: putative ribonuclease H protein A...    98   7e-31
ref|XP_009114468.1| PREDICTED: putative ribonuclease H protein A...    88   1e-30
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    93   2e-30
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   101   2e-30
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo...   101   2e-30
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    90   2e-30
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...    89   2e-30
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   102   5e-30
ref|XP_015619246.1| PREDICTED: uncharacterized protein LOC107279...   102   5e-30
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   102   5e-30
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...   102   5e-30
ref|XP_009113843.1| PREDICTED: putative ribonuclease H protein A...   101   6e-30
ref|XP_009138589.1| PREDICTED: putative ribonuclease H protein A...    71   2e-29
ref|XP_013658605.1| PREDICTED: uncharacterized protein LOC106363...    85   2e-29

>emb|CDP00431.1| unnamed protein product [Coffea canephora]
          Length = 344

 Score = 90.1 bits (222), Expect(3) = 2e-36
 Identities = 44/114 (38%), Positives = 62/114 (54%)
 Frame = -3

Query: 571 ICKRGLDIDPICKSCGEERETIENVMFHCPRAKFVWKLAPIHWDGLMEESKSFSC*WGKI 392
           I +R     PIC  CG+  ETIE+++FHC +A+ VWKLAPI WDG+  ++  F   W  +
Sbjct: 213 IFRRTKQGSPICSRCGDGMETIEHILFHCHQAQKVWKLAPIQWDGIQNQTGCFKKWWAAL 272

Query: 391 CGMESNPYTIKRIQLTSYLLWWLWKTRNLWVFENC*KPEQFTVEATLLDWTEFK 230
               S     + I LT+ LLW LWK RN   FE   +     V+    +W E++
Sbjct: 273 SQATSRTEGRQHIALTANLLWQLWKDRNQMEFEGKEREGLKIVQKASSEWMEYE 326



 Score = 74.7 bits (182), Expect(3) = 2e-36
 Identities = 32/90 (35%), Positives = 57/90 (63%)
 Frame = -2

Query: 1193 LLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVKNNAS*LWRCSMGCRKTLEKGLIF 1014
            +L KQ+WRL+  P+LLV ++LK+KY+P   +       NAS  W+  +  R+ ++ G++ 
Sbjct: 1    MLGKQIWRLIRYPSLLVSRILKSKYYPKDSILNCESPKNASWFWQSIISAREAIKGGILK 60

Query: 1013 EVGNGNLIKIWQNPWIPDSYLFKPI*SAPS 924
            +VG+G  I+IW++ WIP++   +P    P+
Sbjct: 61   KVGSGKSIRIWKDQWIPNNLNGRPTTRMPA 90



 Score = 37.7 bits (86), Expect(3) = 2e-36
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
 Frame = -1

Query: 828 LKSETPVFEKRDKLVWPHDSKGIFTVKSAYLQLILNKVGNMDVRNVVVMHTR*TLSRKKS 649
           LK    +    D   W H   G F+VKS Y Q++L +  +M+        +    S K+ 
Sbjct: 124 LKIPISLSRSGDMHFWTHCKNGEFSVKSCY-QVLLKEDRSMERGAKGEDGSSYDDSNKQI 182

Query: 648 W----GLNIKSKVKHFLWKCYCGIL 586
           W     LNIK K+K F+W+C    L
Sbjct: 183 WKTLWSLNIKHKIKLFIWRCITNTL 207


>ref|XP_009114067.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 524

 Score =  102 bits (253), Expect(5) = 5e-33
 Identities = 40/99 (40%), Positives = 70/99 (70%)
 Frame = -2

Query: 1259 KITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVKN 1080
            +++VP+R GGLG  DL+ FN+ALL KQ+WR++  P  L+ +++KA+YFP G++  A +K 
Sbjct: 108  RVSVPKREGGLGFRDLEKFNQALLGKQVWRIIQNPQCLMARIIKARYFPDGNIFTATIKR 167

Query: 1079 NAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIP 963
             +S  W+  +  R  L++G+ F +G+G+ + +W +PW+P
Sbjct: 168  KSSYAWKSLIYGRDLLKRGMRFIIGDGSTVNMWADPWLP 206



 Score = 43.5 bits (101), Expect(5) = 5e-33
 Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
 Frame = -3

Query: 538 CKSCGEERETIENVMFHCPRAKFVWKLAPIHWDGLMEESKSFSC*WGKI-----CGMESN 374
           C  C    ET ++++F CP A+ +W+ + I  + +   + S+S    KI     C   S+
Sbjct: 346 CMRCCSAIETEQHMLFDCPYAQKIWRASGISSNII---NGSYSTLEEKIEACLTCNRSSS 402

Query: 373 PYTIKRIQLTSYLLWWLWKTRNLWVFE 293
              IK + +  YLLW +WK+RN+ +F+
Sbjct: 403 LTHIKDLPI--YLLWRIWKSRNMMMFQ 427



 Score = 37.4 bits (85), Expect(5) = 5e-33
 Identities = 25/83 (30%), Positives = 39/83 (46%)
 Frame = -1

Query: 795 DKLVWPHDSKGIFTVKSAYLQLILNKVGNMDVRNVVVMHTR*TLSRKKSWGLNIKSKVKH 616
           D L W +   GI+TVKS Y         ++   +++       L +++ W +N   K+KH
Sbjct: 265 DLLGWHYTDDGIYTVKSGYWLST-----HLPDNDIIEPIWGDPLIKQRVWKMNSPPKIKH 319

Query: 615 FLWKCYCGILPTTSKSVREGWTL 547
           FLWK       T S+S+  G  L
Sbjct: 320 FLWK-------TLSRSLAVGSNL 335



 Score = 26.2 bits (56), Expect(5) = 5e-33
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 1339 KINQLVAKFW*GGLDRARTKIHW 1271
            +IN ++AKFW G  D  +T +HW
Sbjct: 83   EINSILAKFWWGSGD--KTGMHW 103



 Score = 21.6 bits (44), Expect(5) = 5e-33
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 925 LVRVNELMSEDRTYWNIELMESLFNEEGCANILKIR 818
           L  V   M ED T WNI+ +      E    IL ++
Sbjct: 222 LESVRNYMLEDGTGWNIDKLRDNVVPEDVEVILSLK 257


>ref|XP_012067552.1| PREDICTED: uncharacterized protein LOC105630356 [Jatropha curcas]
          Length = 1113

 Score = 96.7 bits (239), Expect(4) = 7e-33
 Identities = 45/101 (44%), Positives = 63/101 (62%)
 Frame = -2

Query: 1262 DKITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVK 1083
            DK+ +P+  GGLG   +  FN ALL KQ W+LM  P+ L  +VLKAKYFP     +A + 
Sbjct: 638  DKMAIPKLFGGLGFRKIHEFNIALLGKQGWKLMASPDSLAARVLKAKYFPNCSYLEADLG 697

Query: 1082 NNAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIPD 960
            +N S +WR   G +  ++KGL   VG+G+   IW +PW+PD
Sbjct: 698  SNPSYVWRSIWGSKSLIQKGLYMRVGSGSNTFIWDSPWLPD 738



 Score = 45.1 bits (105), Expect(4) = 7e-33
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
 Frame = -3

Query: 592  HTTYNIQICKRGL-----DIDPICKSCGEERETIENVMFHCPRAKFVWKLAPIHWDGLME 428
            H   ++  C+R L     DI  IC  C    ET  +++ +CP ++ VW L+  H      
Sbjct: 849  HAVCDVLPCRRNLRSRRMDIQDICPLCLGHSETTLHILINCPFSRQVWTLS--HLGYRWS 906

Query: 427  ESKSFSC*WGKICGMESNPYTIKRIQLTSYLLWWLWKTRN 308
             + SF    G+     S+  T++ +   S + W LW TRN
Sbjct: 907  SATSF----GEWFQQASSSSTLENLNYISMVCWALWVTRN 942



 Score = 43.9 bits (102), Expect(4) = 7e-33
 Identities = 21/71 (29%), Positives = 34/71 (47%)
 Frame = -1

Query: 795 DKLVWPHDSKGIFTVKSAYLQLILNKVGNMDVRNVVVMHTR*TLSRKKSWGLNIKSKVKH 616
           D++ W  D+KG +TVKS Y  L+          N +  H   ++   + W + I  K  +
Sbjct: 795 DRVCWKFDAKGTYTVKSGYRLLL---------HNPLASHFLSSICWTRLWKMKIPPKALN 845

Query: 615 FLWKCYCGILP 583
           F+W   C +LP
Sbjct: 846 FIWHAVCDVLP 856



 Score = 25.0 bits (53), Expect(4) = 7e-33
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -3

Query: 916 VNELMSEDRTYWNIELMESLFNEEGCANILKI 821
           V++L++  R  W++E +  LFNE   A IL I
Sbjct: 757 VSDLIAHRR--WDVERIRRLFNERDIACILSI 786


>ref|XP_010666352.1| PREDICTED: uncharacterized protein LOC104883509 [Beta vulgaris subsp.
            vulgaris]
          Length = 1234

 Score = 94.7 bits (234), Expect(4) = 4e-32
 Identities = 44/101 (43%), Positives = 65/101 (64%)
 Frame = -2

Query: 1262 DKITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVK 1083
            +K+  P+  GGLG  DL +FN+ALL KQ+WRL+     L+ +V+ AKY+P GD+ QA + 
Sbjct: 768  EKMCKPKCMGGLGFKDLTVFNDALLGKQVWRLLHHKESLLSRVMSAKYYPHGDVCQARLG 827

Query: 1082 NNAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIPD 960
             ++S  WR   G +  + +GLI+ VG+G  I IW  PW+ D
Sbjct: 828  YSSSYSWRSIWGAKSLVMEGLIWRVGDGTKIDIWSAPWVGD 868



 Score = 48.1 bits (113), Expect(4) = 4e-32
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
 Frame = -1

Query: 798  RDKLVWPHDSKGIFTVKSAYLQLILNKVGNMD----VRNVVVMHTR*TLSRKKSWGLNIK 631
            +D L W +   GI++VK+AY+   L K GN+D    V N++             W LN+ 
Sbjct: 924  QDDLTWAYSKDGIYSVKTAYM---LGKGGNLDDFHRVWNIL-------------WSLNVS 967

Query: 630  SKVKHFLWKCYCGILP 583
             KV+HFLW+     LP
Sbjct: 968  PKVRHFLWRACTSSLP 983



 Score = 32.7 bits (73), Expect(4) = 4e-32
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -3

Query: 916 VNELMSEDRTYWNIELMESLFNEEGCANILKI 821
           V +LM  +R  WN+EL+ES FNE     IL I
Sbjct: 885 VGDLMDVERKEWNVELIESHFNERDQQCILAI 916



 Score = 32.3 bits (72), Expect(4) = 4e-32
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
 Frame = -3

Query: 538  CKSCGEERETIENVMFHCPRAKFVWKLAPIH--WDGLMEESKSFSC*WGKICGMESNPYT 365
            C  C  E ET  ++ + CP +  +W+    H    G+ +E+   +        +  +   
Sbjct: 999  CPCCDREDETQLHLFYRCPMSLKLWEELGCHILLPGVEDEAMCDTL-------VRWSEMD 1051

Query: 364  IKRIQLTSYLLWWLWKTRNLWVFE 293
               +Q   YLLW +W  RN  VFE
Sbjct: 1052 ATVVQKGCYLLWNVWVERNRKVFE 1075


>ref|XP_008372934.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 961

 Score = 92.8 bits (229), Expect(3) = 6e-32
 Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
 Frame = -2

Query: 1304 WIRQSPDQNSLE--A*DKITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVL 1131
            W R S D+  +   A +KI   +R+GGLG  D+Q FN ALL K  WR+  QP+ L+  VL
Sbjct: 404  WWRGSGDRKGIHWVAWEKIRSQKRNGGLGFKDIQCFNLALLAKIGWRITLQPBSLJANVL 463

Query: 1130 KAKYFPCGDLTQAMVKNNAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIPDSYL 951
            + KYFP     +A      S  W+     RK L+KG+ + VG+GN I I ++PW P    
Sbjct: 464  REKYFPGKTFREASGGRGTSWGWKGIFEARKVLDKGIRWRVGDGNCINIREDPWFPKPST 523

Query: 950  FK 945
            FK
Sbjct: 524  FK 525



 Score = 52.0 bits (123), Expect(3) = 6e-32
 Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = -3

Query: 565 KRGLDIDPICKSCGEERETIENVMFHCPRAKFVWKLAPIHWDGLMEESKSFSC*WGKICG 386
           +R L +   C+ C +  ET  ++ F C  +   W  +P+  + L  E   F   WG  CG
Sbjct: 657 RRXLRVXNFCEGCMQPDETENHLFFRCEISHIFWFCSPLQINSLELEGNDFLASWGSFCG 716

Query: 385 -MESNPYTIKRIQLTSYLLWWLWKTRNLWVFE 293
            ++      + +Q   + LW LWK RN  +F+
Sbjct: 717 RVKGKENEXELMQEFVFGLWHLWKNRNDLIFK 748



 Score = 42.7 bits (99), Expect(3) = 6e-32
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
 Frame = -1

Query: 852 MKKVVLIFLKSETPVFEKRDKLVWPHDSKGIFTVKSAY-LQLILNKVGNMDVRNVVVMHT 676
           ++K V   L      +   D L+W H   G +TV++ Y + L L + G+M  +   +  +
Sbjct: 558 LEKDVTSILSIPLSRYGMSDXLIWHHXRNGEYTVRTGYGVALGLMENGDMGKKGRGMPSS 617

Query: 675 R*TLSR--KKSWGLNIKSKVKHFLWKC 601
             +LS    K W L + +K+K F+WKC
Sbjct: 618 APSLSHVWNKIWNLEVPNKMKFFVWKC 644


>ref|XP_009149305.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 963

 Score = 73.2 bits (178), Expect(4) = 2e-31
 Identities = 31/101 (30%), Positives = 55/101 (54%)
 Frame = -2

Query: 1259 KITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVKN 1080
            ++ +P+  GG+G  DL  FN ALL KQ W++   P  L+ ++ K +Y+      Q+    
Sbjct: 445  RLCLPKNEGGMGFCDLHGFNVALLAKQAWKIEQNPTSLLSRIYKGRYYNSSTFLQSTSLT 504

Query: 1079 NAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIPDS 957
            ++S  W+     +  L+KGL+ ++GNG    +W + W+  S
Sbjct: 505  SSSYGWKSIQVGKDLLKKGLVMQIGNGQNTNVWNDQWLQTS 545



 Score = 65.1 bits (157), Expect(4) = 2e-31
 Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
 Frame = -3

Query: 574 QICKRGLDIDPICKSCGEERETIENVMFHCPRAKFVWKLAPIHWDGLMEESKSFS-C*WG 398
           Q+C RG++I+PIC+ CG E ETI +V+F CP A   W+ + +  +G+       +     
Sbjct: 671 QLCSRGININPICQRCGLEEETINHVLFLCPHALATWRCSGLPLNGIQSHDLERNIAELF 730

Query: 397 KICGMESNPYTIKRIQLTSYLLWWLWKTRN 308
            +      P  + +  LT +LLW++WK+RN
Sbjct: 731 FLLHRRDTPSAVSK--LTFWLLWYIWKSRN 758



 Score = 36.6 bits (83), Expect(4) = 2e-31
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 9/93 (9%)
 Frame = -1

Query: 807 FEKRDKLVWPHDSKGIFTVKSAYL---------QLILNKVGNMDVRNVVVMHTR*TLSRK 655
           F + D+ VWP  S   ++VKS Y            I    G+  ++N +           
Sbjct: 597 FNQCDRYVWPFTSDCKYSVKSGYWTNTHVFSEDDPIEPPPGSFQLKNQI----------- 645

Query: 654 KSWGLNIKSKVKHFLWKCYCGILPTTSKSVREG 556
             W L I  K++HF WK   G L T ++    G
Sbjct: 646 --WDLEILPKIQHFFWKAVTGALATFAQLCSRG 676



 Score = 30.8 bits (68), Expect(4) = 2e-31
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 928 PLVRVNELMSEDRTYWNIELMESLFNEEGCANILKIR 818
           P ++V+EL+++    WN  ++E LF  E    I KIR
Sbjct: 557 PNMKVSELINQSSASWNEAILEELFVPEDIIEIKKIR 593


>ref|XP_009108245.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 459

 Score = 98.2 bits (243), Expect(5) = 7e-31
 Identities = 39/98 (39%), Positives = 68/98 (69%)
 Frame = -2

Query: 1259 KITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVKN 1080
            +++VP+R GGLG  DL+ FN+ALL KQ+WR++  P  L+ +++KA+YFP G+   A +K 
Sbjct: 108  RVSVPKREGGLGFRDLEKFNQALLGKQVWRIIQNPQCLMARIIKARYFPDGNTFTATIKR 167

Query: 1079 NAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWI 966
             +S  W+  +  R  L++G+ F +G+G+ + +W +PW+
Sbjct: 168  KSSYAWKSLIYGRDLLKRGMRFIIGDGSTVNMWADPWL 205



 Score = 43.5 bits (101), Expect(5) = 7e-31
 Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
 Frame = -3

Query: 538 CKSCGEERETIENVMFHCPRAKFVWKLAPIHWDGLMEESKSFSC*WGKI-----CGMESN 374
           C  C    ET ++++F CP A+ +W+ + I  + +   + S+S    KI     C   S+
Sbjct: 346 CMRCCSAIETEQHMLFDCPYAQKIWRASGISSNII---NGSYSTLEEKIEACLTCNRSSS 402

Query: 373 PYTIKRIQLTSYLLWWLWKTRNLWVFE 293
              IK + +  YLLW +WK+RN+ +F+
Sbjct: 403 LAHIKDLPI--YLLWRIWKSRNMMMFQ 427



 Score = 37.0 bits (84), Expect(5) = 7e-31
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = -1

Query: 795 DKLVWPHDSKGIFTVKSAYLQLILNKVGNMDVRNVVVMHTR*TLSRKKSWGLNIKSKVKH 616
           D L W +   GI+TVKS Y         ++   +++       L +++ W +N   K+KH
Sbjct: 265 DLLGWHYTDDGIYTVKSGYWLST-----HLPDNDIIEPIWGDPLIKQRVWKMNSPPKIKH 319

Query: 615 FLWK 604
           FLWK
Sbjct: 320 FLWK 323



 Score = 22.3 bits (46), Expect(5) = 7e-31
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 1339 KINQLVAKFW*GGLDRARTKIHW 1271
            +IN ++AKFW G     +  +HW
Sbjct: 83   EINSILAKFWWG--SGVKKGMHW 103



 Score = 22.3 bits (46), Expect(5) = 7e-31
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 925 LVRVNELMSEDRTYWNIELMESLFNEEGCANILKIR 818
           L  V   M ED T WNI+ +      E    IL ++
Sbjct: 222 LESVRNYMKEDGTGWNIDKLRDNVVPEDVEVILSLK 257


>ref|XP_009114468.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 573

 Score = 88.2 bits (217), Expect(4) = 1e-30
 Identities = 40/108 (37%), Positives = 63/108 (58%)
 Frame = -2

Query: 1262 DKITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVK 1083
            D +   +  GGLG HD+  FN+ALL KQ WR+ +QPN L+ ++LK++YF      +A + 
Sbjct: 38   DTLCKSKEDGGLGFHDIGRFNQALLGKQAWRVFSQPNSLMARILKSRYFKNSSFLEASLG 97

Query: 1082 NNAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIPDSYLFKPI 939
            +  S +WR  +  R+ L  GL+  VGNG+   +W + W+ D     P+
Sbjct: 98   SRPSFIWRSILHGREALNSGLLRVVGNGDQTNVWTSNWLLDKEARPPM 145



 Score = 54.7 bits (130), Expect(4) = 1e-30
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
 Frame = -3

Query: 562 RGLDIDPICKSCGEERETIENVMFHCPRAKFVWKLAPIHWDGL-MEESKSFSC*WGKICG 386
           RGL  +  C +CG+  ETI +V+F CP A   W+LA IH       +S  F      + G
Sbjct: 273 RGLHNNTTCLACGQASETICHVLFTCPTAVEAWRLAGIHSPPAGFSQSSVFLNLHYLVAG 332

Query: 385 MESNPYTIKRIQLTSYLLWWLWKTRNLWVFE 293
            +        ++   ++LW LWK RN  VFE
Sbjct: 333 TKKQRNDQDNLKAFPWILWHLWKGRNSLVFE 363



 Score = 33.5 bits (75), Expect(4) = 1e-30
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
 Frame = -1

Query: 795 DKLVWPHDSKGIFTVKSAYLQL-ILNKVGNMDVRNVVVMHTR*TLSRKKSWGLNIKSKVK 619
           D  +W     G +T +SAY  L  L++  +   R +  +  +     K  W L    K++
Sbjct: 197 DSDIWGFTKTGCYTTQSAYRMLSTLHETKSPAYRPLPPVEKQ---LWKSIWKLKTSPKIR 253

Query: 618 HFLWKCYCGILPTTSKSVREG 556
           HFLW+   G L    +    G
Sbjct: 254 HFLWRALSGALAVAERLQSRG 274



 Score = 26.9 bits (58), Expect(4) = 1e-30
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 922 VRVNELMSEDRTYWNIELMESLFNEEGCANILKIRNT 812
           ++V++L   +   WN + +   F EE    ILKI+ T
Sbjct: 156 LKVSDLWFPNSRVWNAQKLFDTFTEEDALQILKIKPT 192


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 92.8 bits (229), Expect(4) = 2e-30
 Identities = 39/100 (39%), Positives = 64/100 (64%)
 Frame = -2

Query: 1262 DKITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVK 1083
            +K+ +P++ GGLGI +  +FN ALL KQ WR++T+P+ L+ +V+K KYFP  +  +A V 
Sbjct: 851  EKLFLPKKEGGLGIRNFDVFNRALLAKQAWRILTKPDSLMARVIKGKYFPRSNFLEARVS 910

Query: 1082 NNAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIP 963
             N S   +  +  R  ++KG+   +G+G    IW +PW+P
Sbjct: 911  PNMSFTCKSILSARAVIQKGMCRVIGDGRDTTIWGDPWVP 950



 Score = 52.0 bits (123), Expect(4) = 2e-30
 Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
 Frame = -3

Query: 565  KRGLDIDPICKSCGEERETIENVMFHCPRAKFVWKLAPIHWDGLMEESKSFSC*WGKICG 386
            KRG++ID  C  CGE+ ET E++++ C  +   W ++P+       E+ SF   W     
Sbjct: 1083 KRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRI-W----- 1136

Query: 385  MESNPYTIKRIQ---LTSYLLWWLWKTRNLWVFENC*KPEQFTVEATLLDWTEFK 230
            +ES   T K  +   L   + W +W  RN WVFE      Q  VE  +    EF+
Sbjct: 1137 VESLLDTHKDTEWWALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFE 1191



 Score = 31.2 bits (69), Expect(4) = 2e-30
 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
 Frame = -1

Query: 804  EKRDKLVWPHDSKGIFTVKSAYLQLIL--NKVGNMDVRNVVVMHTR*TLSRKKSWGLNIK 631
            +K D+ +W     G FTV+SAY   +L   K G    R   +         +K W   I 
Sbjct: 1007 KKPDQWMWMMSKNGQFTVRSAYYHELLEDRKTGPSTSRGPNLK------LWQKIWKAKIP 1060

Query: 630  SKVKHFLWK 604
             KVK F WK
Sbjct: 1061 PKVKLFSWK 1069



 Score = 26.6 bits (57), Expect(4) = 2e-30
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -3

Query: 919  RVNELMSEDRTYWNIELMESLF 854
            +V EL+S DR  WN+EL+ +LF
Sbjct: 971  KVCELISNDR--WNVELLNTLF 990


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  101 bits (252), Expect(3) = 2e-30
 Identities = 46/108 (42%), Positives = 69/108 (63%)
 Frame = -2

Query: 1262 DKITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVK 1083
            +K+T+P+  GGLG  D+ +FN A+L KQ WRL+  P+ L  +VL+AKYFP GD  +    
Sbjct: 1071 NKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQT 1130

Query: 1082 NNAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIPDSYLFKPI 939
            +N S  WR      + L+ G+I+ +G+G+ I IW +PWIP  +  KP+
Sbjct: 1131 SNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWADPWIPRGWSRKPM 1178



 Score = 42.4 bits (98), Expect(3) = 2e-30
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
 Frame = -1

Query: 828  LKSETPVFEKRDKLVWPHDSKGIFTVKSAY-----LQLILNKVGNMDVRNVVVMHTR*TL 664
            +KS     E  D L W  D++G FTVKSAY     ++   ++ G   V N     +    
Sbjct: 1217 IKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSN---WESGDDD 1273

Query: 663  SRKKSWGLNIKSKVKHFLWK 604
              KK W L +  K+KHFLW+
Sbjct: 1274 FWKKLWKLGVPGKIKHFLWR 1293



 Score = 38.5 bits (88), Expect(3) = 2e-30
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
 Frame = -3

Query: 562  RGLDIDPICKSCGEERETIENVMFHCPRAKFVWKLAPI-HWDGLMEESKSFSC*WGKICG 386
            RG+D+D  C  CG   E   ++ F C   K VW+   +     ++E+  S     GK   
Sbjct: 1308 RGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEELRSMLEQQTS-----GK--N 1360

Query: 385  MESNPYTIKRIQLTSYL--LWWLWKTRN 308
            +  + Y    I+ TS +  LW  WK RN
Sbjct: 1361 VLQSIYCRPEIERTSAIVCLWQWWKERN 1388


>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
          Length = 639

 Score =  101 bits (252), Expect(3) = 2e-30
 Identities = 46/108 (42%), Positives = 69/108 (63%)
 Frame = -2

Query: 1262 DKITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVK 1083
            +K+T+P+  GGLG  D+ +FN A+L KQ WRL+  P+ L  +VL+AKYFP GD  +    
Sbjct: 38   NKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQT 97

Query: 1082 NNAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIPDSYLFKPI 939
            +N S  WR      + L+ G+I+ +G+G+ I IW +PWIP  +  KP+
Sbjct: 98   SNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWADPWIPRGWSRKPM 145



 Score = 42.4 bits (98), Expect(3) = 2e-30
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
 Frame = -1

Query: 828 LKSETPVFEKRDKLVWPHDSKGIFTVKSAY-----LQLILNKVGNMDVRNVVVMHTR*TL 664
           +KS     E  D L W  D++G FTVKSAY     ++   ++ G   V N     +    
Sbjct: 184 IKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSN---WESGDDD 240

Query: 663 SRKKSWGLNIKSKVKHFLWK 604
             KK W L +  K+KHFLW+
Sbjct: 241 FWKKLWKLGVPGKIKHFLWR 260



 Score = 38.5 bits (88), Expect(3) = 2e-30
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
 Frame = -3

Query: 562 RGLDIDPICKSCGEERETIENVMFHCPRAKFVWKLAPI-HWDGLMEESKSFSC*WGKICG 386
           RG+D+D  C  CG   E   ++ F C   K VW+   +     ++E+  S     GK   
Sbjct: 275 RGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEELRSMLEQQTS-----GK--N 327

Query: 385 MESNPYTIKRIQLTSYL--LWWLWKTRN 308
           +  + Y    I+ TS +  LW  WK RN
Sbjct: 328 VLQSIYCRPEIERTSAIVCLWQWWKERN 355


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 90.1 bits (222), Expect(4) = 2e-30
 Identities = 42/101 (41%), Positives = 63/101 (62%)
 Frame = -2

Query: 1262 DKITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVK 1083
            +K+  P+  GG+G  DL +FN+ALL KQ+WRL+     L+ +V+ AKY+P GD+  A + 
Sbjct: 849  EKMCKPKCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLLSRVMSAKYYPHGDVRYARLG 908

Query: 1082 NNAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIPD 960
             + S  WR   G +  + +GLI+ VG+G  I IW  PW+ D
Sbjct: 909  YSHSYSWRSIWGAKSLVLEGLIWRVGDGTKIDIWSAPWVGD 949



 Score = 47.0 bits (110), Expect(4) = 2e-30
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
 Frame = -1

Query: 798  RDKLVWPHDSKGIFTVKSAYLQLILNKVGNMD----VRNVVVMHTR*TLSRKKSWGLNIK 631
            +D+L W +   G ++VK+AY+   L K GN+D    V N++             W LN+ 
Sbjct: 1005 QDELTWAYSKDGTYSVKTAYM---LGKGGNLDDFHRVWNIL-------------WSLNVS 1048

Query: 630  SKVKHFLWKCYCGILP 583
             KV+HFLW+     LP
Sbjct: 1049 PKVRHFLWRACTSSLP 1064



 Score = 34.3 bits (77), Expect(4) = 2e-30
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
 Frame = -3

Query: 538  CKSCGEERETIENVMFHCPRAKFVWKL--APIHWDGLMEESKSFSC*WGKICGMESNPYT 365
            C  C  E ET  ++ + CP +  +W+   + I   G+ +E+   +        +  +   
Sbjct: 1080 CPCCAREDETQFHLFYRCPMSLKLWEELGSYILLPGIEDEAMCDTL-------VRWSQMD 1132

Query: 364  IKRIQLTSYLLWWLWKTRNLWVFENC*KP 278
             K +Q   Y+LW +W  RN  VFE+  +P
Sbjct: 1133 AKVVQKGCYILWNVWVERNRRVFEHTSQP 1161



 Score = 30.8 bits (68), Expect(4) = 2e-30
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -3

Query: 916  VNELMSEDRTYWNIELMESLFNEEGCANILKI 821
            V +LM  +R  WN+EL+E  FNE     IL I
Sbjct: 966  VGDLMDVERKEWNVELIERHFNERDQQCILAI 997


>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score = 88.6 bits (218), Expect(3) = 2e-30
 Identities = 40/108 (37%), Positives = 67/108 (62%)
 Frame = -2

Query: 1262 DKITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVK 1083
            D ++  +R GGLG  DL  FN+AL+ KQ WRL+  PN L+ +V+KA+Y+       A V 
Sbjct: 936  DSMSKAKRRGGLGFRDLPSFNQALVAKQGWRLVRYPNSLMARVMKARYYKNSTFWNAKVG 995

Query: 1082 NNAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIPDSYLFKPI 939
            +N S +WR  +   + ++KG+ + +G+G  + ++++ WIP    F+PI
Sbjct: 996  SNPSFIWRSILWGSQVIKKGVRWRIGDGKKVLVYKDKWIPRPATFQPI 1043



 Score = 47.0 bits (110), Expect(3) = 2e-30
 Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
 Frame = -1

Query: 867  WRVC-----LMKKVVLIFLKSETPVFEKRDKLVWPHDSKGIFTVKSAYLQLILNKVGNMD 703
            WRV       MK+ +   LK   P  ++ D+++W  D KG ++VKS Y QL LN+    +
Sbjct: 1064 WRVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSVKSGY-QLALNQ----N 1118

Query: 702  VRNVVVMHTR*TLSRKKSWGLNIKSKVKHFLWKCYCGILPT 580
              N        +   K  W L++  KVK F+W+    ILPT
Sbjct: 1119 FPNEPESSNSSSRLWKIPWMLDLPEKVKIFMWRALKNILPT 1159



 Score = 46.6 bits (109), Expect(3) = 2e-30
 Identities = 25/85 (29%), Positives = 43/85 (50%)
 Frame = -3

Query: 547  DPICKSCGEERETIENVMFHCPRAKFVWKLAPIHWDGLMEESKSFSC*WGKICGMESNPY 368
            +PIC+ C  + ET+ +V+  C  A+ +W LAP+      + ++ F   +  I  M S   
Sbjct: 1171 EPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKDHNQDF---FSAIQEMWSRSS 1227

Query: 367  TIKRIQLTSYLLWWLWKTRNLWVFE 293
            T +  +L     W +W  RN ++FE
Sbjct: 1228 TAE-AELMIVYCWVIWSARNKFIFE 1251


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  102 bits (255), Expect(3) = 5e-30
 Identities = 47/108 (43%), Positives = 69/108 (63%)
 Frame = -2

Query: 1262 DKITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVK 1083
            +K+T+P+  GGLG  D+ +FN A+L KQ WRL+  P+ L  +VL+AKYFP GD  +    
Sbjct: 1098 NKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQT 1157

Query: 1082 NNAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIPDSYLFKPI 939
            +N S  WR      + L+ G+I+ VG+G+ I IW +PWIP  +  KP+
Sbjct: 1158 SNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKPM 1205



 Score = 42.4 bits (98), Expect(3) = 5e-30
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
 Frame = -1

Query: 828  LKSETPVFEKRDKLVWPHDSKGIFTVKSAY-----LQLILNKVGNMDVRNVVVMHTR*TL 664
            +KS     E  D L W  D++G FTVKSAY     ++   ++ G   V N     +    
Sbjct: 1244 IKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSN---WESGDDD 1300

Query: 663  SRKKSWGLNIKSKVKHFLWK 604
              KK W L +  K+KHFLW+
Sbjct: 1301 FWKKLWKLGVPGKIKHFLWR 1320



 Score = 35.8 bits (81), Expect(3) = 5e-30
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
 Frame = -3

Query: 562  RGLDIDPICKSCGEERETIENVMFHCPRAKFVWKLAPI-HWDGLMEESKSFSC*WGKICG 386
            RG+D+D  C  CG   E   ++ F C   K VW+   +     ++E+  S     GK   
Sbjct: 1335 RGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEELRSMLEQQTS-----GK--N 1387

Query: 385  MESNPYTIKRIQLTSYL--LWWLWKTRN 308
            +  + Y     + TS +  LW  WK RN
Sbjct: 1388 VLQSIYCRPENERTSAIVCLWQWWKERN 1415


>ref|XP_015619246.1| PREDICTED: uncharacterized protein LOC107279669 [Oryza sativa
            Japonica Group]
          Length = 1587

 Score =  102 bits (255), Expect(3) = 5e-30
 Identities = 47/108 (43%), Positives = 69/108 (63%)
 Frame = -2

Query: 1262 DKITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVK 1083
            +K+T+P+  GGLG  D+ +FN A+L KQ WRL+  P+ L  +VL+AKYFP GD  +    
Sbjct: 1098 NKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQT 1157

Query: 1082 NNAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIPDSYLFKPI 939
            +N S  WR      + L+ G+I+ VG+G+ I IW +PWIP  +  KP+
Sbjct: 1158 SNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKPM 1205



 Score = 42.4 bits (98), Expect(3) = 5e-30
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
 Frame = -1

Query: 828  LKSETPVFEKRDKLVWPHDSKGIFTVKSAY-----LQLILNKVGNMDVRNVVVMHTR*TL 664
            +KS     E  D L W  D++G FTVKSAY     ++   ++ G   V N     +    
Sbjct: 1244 IKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSN---WESGDDD 1300

Query: 663  SRKKSWGLNIKSKVKHFLWK 604
              KK W L +  K+KHFLW+
Sbjct: 1301 FWKKLWKLGVPGKIKHFLWR 1320



 Score = 35.8 bits (81), Expect(3) = 5e-30
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
 Frame = -3

Query: 562  RGLDIDPICKSCGEERETIENVMFHCPRAKFVWKLAPI-HWDGLMEESKSFSC*WGKICG 386
            RG+D+D  C  CG   E   ++ F C   K VW+   +     ++E+  S     GK   
Sbjct: 1335 RGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEELRSMLEQQTS-----GK--N 1387

Query: 385  MESNPYTIKRIQLTSYL--LWWLWKTRN 308
            +  + Y     + TS +  LW  WK RN
Sbjct: 1388 VLQSIYCRPENERTSAIVCLWQWWKERN 1415


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  102 bits (255), Expect(3) = 5e-30
 Identities = 47/108 (43%), Positives = 69/108 (63%)
 Frame = -2

Query: 1262 DKITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVK 1083
            +K+T+P+  GGLG  D+ +FN A+L KQ WRL+  P+ L  +VL+AKYFP GD  +    
Sbjct: 1043 NKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQT 1102

Query: 1082 NNAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIPDSYLFKPI 939
            +N S  WR      + L+ G+I+ VG+G+ I IW +PWIP  +  KP+
Sbjct: 1103 SNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKPM 1150



 Score = 42.4 bits (98), Expect(3) = 5e-30
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
 Frame = -1

Query: 828  LKSETPVFEKRDKLVWPHDSKGIFTVKSAY-----LQLILNKVGNMDVRNVVVMHTR*TL 664
            +KS     E  D L W  D++G FTVKSAY     ++   ++ G   V N     +    
Sbjct: 1189 IKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSN---WESGDDD 1245

Query: 663  SRKKSWGLNIKSKVKHFLWK 604
              KK W L +  K+KHFLW+
Sbjct: 1246 FWKKLWKLGVPGKIKHFLWR 1265



 Score = 35.8 bits (81), Expect(3) = 5e-30
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
 Frame = -3

Query: 562  RGLDIDPICKSCGEERETIENVMFHCPRAKFVWKLAPI-HWDGLMEESKSFSC*WGKICG 386
            RG+D+D  C  CG   E   ++ F C   K VW+   +     ++E+  S     GK   
Sbjct: 1280 RGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEELRSMLEQQTS-----GK--N 1332

Query: 385  MESNPYTIKRIQLTSYL--LWWLWKTRN 308
            +  + Y     + TS +  LW  WK RN
Sbjct: 1333 VLQSIYCRPENERTSAIVCLWQWWKERN 1360


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  102 bits (255), Expect(3) = 5e-30
 Identities = 47/108 (43%), Positives = 69/108 (63%)
 Frame = -2

Query: 1262 DKITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVK 1083
            +K+T+P+  GGLG  D+ +FN A+L KQ WRL+  P+ L  +VL+AKYFP GD  +    
Sbjct: 1039 NKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQT 1098

Query: 1082 NNAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIPDSYLFKPI 939
            +N S  WR      + L+ G+I+ VG+G+ I IW +PWIP  +  KP+
Sbjct: 1099 SNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKPM 1146



 Score = 42.4 bits (98), Expect(3) = 5e-30
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
 Frame = -1

Query: 828  LKSETPVFEKRDKLVWPHDSKGIFTVKSAY-----LQLILNKVGNMDVRNVVVMHTR*TL 664
            +KS     E  D L W  D++G FTVKSAY     ++   ++ G   V N     +    
Sbjct: 1185 IKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSN---WESGDDD 1241

Query: 663  SRKKSWGLNIKSKVKHFLWK 604
              KK W L +  K+KHFLW+
Sbjct: 1242 FWKKLWKLGVPGKIKHFLWR 1261



 Score = 35.8 bits (81), Expect(3) = 5e-30
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
 Frame = -3

Query: 562  RGLDIDPICKSCGEERETIENVMFHCPRAKFVWKLAPI-HWDGLMEESKSFSC*WGKICG 386
            RG+D+D  C  CG   E   ++ F C   K VW+   +     ++E+  S     GK   
Sbjct: 1276 RGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEELRSMLEQQTS-----GK--N 1328

Query: 385  MESNPYTIKRIQLTSYL--LWWLWKTRN 308
            +  + Y     + TS +  LW  WK RN
Sbjct: 1329 VLQSIYCRPENERTSAIVCLWQWWKERN 1356


>ref|XP_009113843.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 896

 Score =  101 bits (252), Expect(4) = 6e-30
 Identities = 42/107 (39%), Positives = 71/107 (66%)
 Frame = -2

Query: 1259 KITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVKN 1080
            ++++P++ GG+G  D + FN+ALL KQ+WR++ +PN L+ +VLK KYFP  ++ +A  K 
Sbjct: 372  RMSLPKKEGGMGFRDFEKFNDALLAKQVWRILIKPNSLMARVLKGKYFPNSNILKAGTKK 431

Query: 1079 NAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWIPDSYLFKPI 939
             +S +W   +  +  L++GL F +GNG  + +W +PW+P S    PI
Sbjct: 432  QSSYIWNSLLHGQALLKRGLRFIIGNGESVSLWADPWLPTSPPRSPI 478



 Score = 34.3 bits (77), Expect(4) = 6e-30
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = -1

Query: 795 DKLVWPHDSKGIFTVKSAYLQLILNKVGNMDVRNVVVMHTR*TLSRKKS-WGLNIKSKVK 619
           D LVW ++  G ++VKS Y       +   D +++ +     ++  K   W L    K++
Sbjct: 529 DPLVWHYNKSGEYSVKSGYW------LATHDPQDLPIEPPPGSIILKNMIWKLPTAPKLQ 582

Query: 618 HFLWKCYCGILPTTSKSVR 562
           HFLWK     LP  S   R
Sbjct: 583 HFLWKMVTSSLPLGSNLQR 601



 Score = 32.3 bits (72), Expect(4) = 6e-30
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -3

Query: 943 PSDQL-PLVRVNELMSEDRTYWNIELMESLFNEEGCANILKIR 818
           P DQ  P+ +V+ELM +++T WN EL+     E     IL ++
Sbjct: 479 PKDQSNPMTKVSELMKQNQTGWNEELIRHTIVEADAEEILSMK 521



 Score = 32.3 bits (72), Expect(4) = 6e-30
 Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
 Frame = -3

Query: 538 CKSCGEERETIENVMFHCPRAKFVWKLAPIHWDGLMEESKSFSC*WGKICGM-ESNPYTI 362
           C  C +E ET E++ F C  A+ +W+ + +  +   +   +      K+  + +  P   
Sbjct: 610 CPHCQQE-ETTEHLFFECFYAQRIWRASGLPHNIFYQAQSTLE---DKLMALLQKIPNLP 665

Query: 361 KRIQ-LTSYLLWWLWKTRNLWVFENC*KPEQFTVEATLLDWTEF 233
             ++ L  ++LW +WK RN  +F+      + T+++   D  E+
Sbjct: 666 DHLRHLPWWILWRIWKCRNKMIFQQTSIHWRTTLQSAYFDTKEW 709


>ref|XP_009138589.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 739

 Score = 71.2 bits (173), Expect(4) = 2e-29
 Identities = 34/99 (34%), Positives = 59/99 (59%)
 Frame = -2

Query: 1262 DKITVPRRHGGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVK 1083
            D++   + +GGLG  D++ FN ALL KQLWR+++  + L+ +V K++YF   D   A + 
Sbjct: 193  DQMCKRKENGGLGFKDIEAFNLALLGKQLWRMLSVKDSLLTRVFKSRYFAKSDPLSAGLG 252

Query: 1082 NNAS*LWRCSMGCRKTLEKGLIFEVGNGNLIKIWQNPWI 966
            +  S  WR     +K +++G    +G+G   K++Q+ WI
Sbjct: 253  SRPSYAWRSIHAAQKLIQQGARVLIGSGEDTKVFQDSWI 291



 Score = 50.1 bits (118), Expect(4) = 2e-29
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
 Frame = -3

Query: 571 ICKRGLDIDPICKSCGEERETIENVMFHCPRAKFVWKLAPIHW--DGLMEESKSFSC*WG 398
           + +R +  +  C  CG + ET+ +V+F CP A+ VW L+PI    +G++  S  +S  + 
Sbjct: 431 LARRHIAKEAGCLRCGCDTETVNHVLFQCPFARLVWALSPIPAPPEGIIMNS-LYSNIYH 489

Query: 397 KICGMESNPYTIKRIQLTSYLLWWLWKTRNLWVFE 293
            +   +  P    + ++  ++LW LWK RN  +F+
Sbjct: 490 ALNIKKEYPREDIQAEIVPWILWRLWKNRNELLFK 524



 Score = 43.5 bits (101), Expect(4) = 2e-29
 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
 Frame = -1

Query: 798 RDKLVWPHDSKGIFTVKSAY-LQL-ILNKVGNMDVRNVVVMHTR*TLSRKKSWGLNIKSK 625
           +D  +W ++ KG +TVKS Y +Q+ +L++   +++    + H       + +W      K
Sbjct: 358 KDIYIWDYNKKGHYTVKSGYWVQVNVLDRSAAVEIDQPSLDHLF-----QLAWSTETSPK 412

Query: 624 VKHFLWKCYCGILPTTSKSVR 562
           V HFLW+C   +LP      R
Sbjct: 413 VHHFLWRCISNLLPVAGNLAR 433



 Score = 34.3 bits (77), Expect(4) = 2e-29
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -3

Query: 922 VRVNELMSEDRTYWNIELMESLFNEEGCANILKIRNTG 809
           +RV EL+      WN+EL+  LF ++   NI KIR  G
Sbjct: 317 LRVRELLINQGREWNMELLTRLFPDDEARNISKIRTCG 354


>ref|XP_013658605.1| PREDICTED: uncharacterized protein LOC106363406 [Brassica napus]
          Length = 872

 Score = 85.1 bits (209), Expect(4) = 2e-29
 Identities = 38/92 (41%), Positives = 59/92 (64%)
 Frame = -2

Query: 1235 GGLGIHDLQLFNEALLTKQLWRLMTQPNLLVCKVLKAKYFPCGDLTQAMVKNNAS*LWRC 1056
            GGLG  D++LFN+ALL KQ WRL+  PN L+ ++LK++YFP GD  +A+     S  W+ 
Sbjct: 400  GGLGFKDIELFNQALLAKQAWRLLNFPNSLLARLLKSRYFPHGDFLKAVTGVKPSLGWKS 459

Query: 1055 SMGCRKTLEKGLIFEVGNGNLIKIWQNPWIPD 960
             +  R+ +EKG+   +G+     +W +PW+ D
Sbjct: 460  ILHGRELVEKGISRRIGDRKSSFVWTDPWMED 491



 Score = 48.5 bits (114), Expect(4) = 2e-29
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
 Frame = -3

Query: 565 KRGLDIDPICKSCGEERETIENVMFHCPRAKFVWKLAPIHWDGLMEESKSFSC*WG---K 395
           +RG+  +  C+ CG  +ETI +V+F C  A+ VW L+ I +     +S+S         +
Sbjct: 625 RRGMKAEEFCQICGSFQETINHVLFSCESARQVWALSNIPYPRHGFDSESVFANMKYLLQ 684

Query: 394 ICGMESNPYTIKRIQLTSYLLWWLWKTRNLWVFE 293
           +  +E   Y  K+ +   +L+W +W  RN ++FE
Sbjct: 685 LIKLEGREY--KQRRAIPWLMWNIWIDRNKFLFE 716



 Score = 38.9 bits (89), Expect(4) = 2e-29
 Identities = 23/86 (26%), Positives = 42/86 (48%)
 Frame = -1

Query: 813 PVFEKRDKLVWPHDSKGIFTVKSAYLQLILNKVGNMDVRNVVVMHTR*TLSRKKSWGLNI 634
           PV  + +  +W  +  G F+VKSA+   ++N+     V     + +   L +++ W ++ 
Sbjct: 545 PVKSRSNFWIWKFNKSGDFSVKSAFW--LVNQYDKESVLEAKALPSLNPL-KQQVWKISS 601

Query: 633 KSKVKHFLWKCYCGILPTTSKSVREG 556
           + K+K+FLWK     LP      R G
Sbjct: 602 EPKIKNFLWKALSSALPVDEGFSRRG 627



 Score = 26.2 bits (56), Expect(4) = 2e-29
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -3

Query: 925 LVRVNELMSEDRTYWNIELMESLFNEEGCANILK 824
           +++V ++++ D   WN + ++ LF  +    ILK
Sbjct: 509 MLKVKDIINADGNQWNYDKLQELFYPQDIKQILK 542