BLASTX nr result

ID: Rehmannia27_contig00033597 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00033597
         (389 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP00431.1| unnamed protein product [Coffea canephora]             66   3e-15
emb|CDP14369.1| unnamed protein product [Coffea canephora]             58   5e-13
emb|CDP14470.1| unnamed protein product [Coffea canephora]             57   1e-10
emb|CDP09717.1| unnamed protein product [Coffea canephora]             51   2e-08
ref|XP_015168279.1| PREDICTED: uncharacterized protein LOC107062...    51   1e-07
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    41   1e-06
ref|XP_009137131.1| PREDICTED: putative ribonuclease H protein A...    40   3e-06
ref|XP_013633284.1| PREDICTED: uncharacterized protein LOC106338...    39   7e-06
ref|XP_013739903.1| PREDICTED: uncharacterized protein LOC106442...    46   8e-06

>emb|CDP00431.1| unnamed protein product [Coffea canephora]
          Length = 344

 Score = 66.2 bits (160), Expect(2) = 3e-15
 Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1   LCKVCGEAKEDLDHILFFCETAKMVWKLAPISWDFPNNCS--FKEWWCSISAPKKKTSGK 174
           +C  CG+  E ++HILF C  A+ VWKLAPI WD   N +  FK+WW ++S    +T G+
Sbjct: 223 ICSRCGDGMETIEHILFHCHQAQKVWKLAPIQWDGIQNQTGCFKKWWAALSQATSRTEGR 282

Query: 175 R 177
           +
Sbjct: 283 Q 283



 Score = 42.0 bits (97), Expect(2) = 3e-15
 Identities = 18/48 (37%), Positives = 28/48 (58%)
 Frame = +3

Query: 171 QERIQLSSYLLWWLWRTRNLCIFENVRTPAKEIVDKAVNEWIEFSNVY 314
           ++ I L++ LLW LW+ RN   FE       +IV KA +EW+E+   +
Sbjct: 282 RQHIALTANLLWQLWKDRNQMEFEGKEREGLKIVQKASSEWMEYEEAW 329


>emb|CDP14369.1| unnamed protein product [Coffea canephora]
          Length = 347

 Score = 58.2 bits (139), Expect(2) = 5e-13
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
 Frame = +1

Query: 1   LCKVCGEAKEDLDHILFFCETAKMVWKLAPISWD----FPNNCSFKEWWCSISAPKKKTS 168
           +CK CGE  E ++H+LFFC+ A  +WK+AP+SW       NN  F  WW  I   +   S
Sbjct: 56  VCKCCGEYPETIEHLLFFCDNALAIWKVAPVSWAGLECLRNN--FGHWWEEIREARAMES 113

Query: 169 GK 174
           G+
Sbjct: 114 GQ 115



 Score = 42.7 bits (99), Expect(2) = 5e-13
 Identities = 19/44 (43%), Positives = 28/44 (63%)
 Frame = +3

Query: 171 QERIQLSSYLLWWLWRTRNLCIFENVRTPAKEIVDKAVNEWIEF 302
           QERI+L+  +LW +W++RN   FE+       +V+KA  EW EF
Sbjct: 115 QERIELTVNVLWQIWKSRNRRQFEDKGMDPMTVVNKATREWREF 158


>emb|CDP14470.1| unnamed protein product [Coffea canephora]
          Length = 660

 Score = 56.6 bits (135), Expect(2) = 1e-10
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
 Frame = +1

Query: 1   LCKVCGEAKEDLDHILFFCETAKMVWKLAPISWD--FPNNCSFKEWWCSISAPKKKTSG 171
           +C++CGE +E ++H++  C+ ++ VWK API WD        F+ WW  IS  + +  G
Sbjct: 386 VCRLCGEDQETVEHLMLNCQHSQQVWKAAPIQWDGAMDQKGDFRRWWIRISEARTRQGG 444



 Score = 35.8 bits (81), Expect(2) = 1e-10
 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +3

Query: 174 ERIQLSSYLLWWLWRTRNLCIFENVR--TPAKEIVDKAVNEWIE 299
           E I L++ +LW LW+ RN   FEN    +PA+ I  KA  EW+E
Sbjct: 446 EHIGLTAIILWQLWKERNSKEFENKTSCSPARTI-GKAQKEWLE 488


>emb|CDP09717.1| unnamed protein product [Coffea canephora]
          Length = 613

 Score = 50.8 bits (120), Expect(2) = 2e-08
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 1   LCKVCGEAKEDLDHILFFCETAKMVWKLAPISWD--FPNNCSFKEWWCSISAPKKKTSGK 174
           +C  CGE +E ++H+ F C  A+ VWK+API WD       +   WW S+     +  G+
Sbjct: 341 ICDGCGEQEESIEHLFFQCSRAQEVWKMAPIQWDGLTEQTRNILVWWNSMLEATNRIEGR 400



 Score = 34.7 bits (78), Expect(2) = 2e-08
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 171 QERIQLSSYLLWWLWRTRNLCIFENVRTPAKEIVDKAVNEWIEFSNVY 314
           +E ++L+  +LW +W+ RN   F   R    E + KA+ EW E ++ +
Sbjct: 400 REHVELTVNILWQIWKRRNEWKFNAKRRHPWESIKKALQEWQEQASAW 447


>ref|XP_015168279.1| PREDICTED: uncharacterized protein LOC107062294 [Solanum tuberosum]
          Length = 199

 Score = 50.8 bits (120), Expect(2) = 1e-07
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +1

Query: 7   KVCGEAKEDLDHILFFCETAKMVWKLAPISW-DFPNNCSFKEWWCSISAPKKK 162
           K CG   E +DH+LF C +A++VWK+ PI+W +  N   F  WW  +    KK
Sbjct: 9   KGCGLESETIDHMLFRCPSAQLVWKICPINWPNLENIVDFAGWWNDLFTNVKK 61



 Score = 31.6 bits (70), Expect(2) = 1e-07
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +3

Query: 174 ERIQLSSYLLWWLWRTRNLCIFENVRTPAKEIVDKAVNEWIEFSN 308
           E I+LS  ++W +W+ RN   F    +   +IV+KA+ ++ E+ +
Sbjct: 67  ELIKLSFSIMWQIWKARNSKSFNGEISNPNDIVNKALFDFHEYES 111


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 40.8 bits (94), Expect(2) = 1e-06
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +1

Query: 1    LCKVCGEAKEDLDHILFFCETAKMVWKLAPI---SWDFPNNCSF 123
            +C  CG  +E ++H+LF C  ++ +W L+PI    + FP N  F
Sbjct: 963  VCPRCGAEEESINHLLFLCPPSRQIWALSPIPSSEYIFPRNSLF 1006



 Score = 38.5 bits (88), Expect(2) = 1e-06
 Identities = 15/43 (34%), Positives = 29/43 (67%)
 Frame = +3

Query: 162  DFWQERIQLSSYLLWWLWRTRNLCIFENVRTPAKEIVDKAVNE 290
            D  ++ +++  ++LW++W++RN  IFENV    + I+D A+ E
Sbjct: 1020 DIAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVILDFAIQE 1062


>ref|XP_009137131.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 508

 Score = 40.4 bits (93), Expect(2) = 3e-06
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +1

Query: 1   LCKVCGEAKEDLDHILFFCETAKMVWKLAPISWDFP 108
           +CKVC  A E + H+LF C TA+ VW+L+    DFP
Sbjct: 230 ICKVCQSAPETICHVLFNCPTAQEVWRLS----DFP 261



 Score = 37.4 bits (85), Expect(2) = 3e-06
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +3

Query: 186 LSSYLLWWLWRTRNLCIFENVRTPAKEIVDKAVNEWIEFSNV 311
           L  ++LW +W+ RN  IF N R  A  ++DKA N++  ++ V
Sbjct: 295 LFPWVLWHIWKGRNELIFANTRLGAATVMDKAQNDYNAWAEV 336


>ref|XP_013633284.1| PREDICTED: uncharacterized protein LOC106338981 [Brassica oleracea
           var. oleracea]
          Length = 503

 Score = 39.3 bits (90), Expect(2) = 7e-06
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +1

Query: 1   LCKVCGEAKEDLDHILFFCETAKMVWKLAP 90
           LCK CG+  E ++H+LF CE A+ VWK AP
Sbjct: 244 LCKRCGKL-ESINHLLFHCEFAEKVWKQAP 272



 Score = 37.4 bits (85), Expect(2) = 7e-06
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +3

Query: 183 QLSSYLLWWLWRTRNLCIFENVRTPAKEIVDKAVNEWIEFSN 308
           QL+ +L+W LW +RN  IF N     +E++ +A++   E+ N
Sbjct: 307 QLAPWLIWSLWTSRNNMIFNNKIVTIEEVISRAISSTKEWKN 348


>ref|XP_013739903.1| PREDICTED: uncharacterized protein LOC106442805 [Brassica napus]
          Length = 1034

 Score = 45.8 bits (107), Expect(2) = 8e-06
 Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
 Frame = +3

Query: 192 SYLLWWLWRTRNLCIFENVRTPAKEIVDKAVN---EWI 296
           S+LLW LW  RNL +FEN  TPA+ +V KAV+   EW+
Sbjct: 838 SWLLWGLWTARNLILFENRATPARTVVGKAVSSAREWL 875



 Score = 30.4 bits (67), Expect(2) = 8e-06
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 4   CKVCGEAKEDLDHILFFCETAKMVWKLAPIS 96
           C  C E +  L H+ F C  A+  W LAP+S
Sbjct: 774 CPHCAEPETAL-HLFFLCPFARQAWDLAPLS 803


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