BLASTX nr result
ID: Rehmannia27_contig00033400
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00033400
(2972 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera] 570 0.0
ref|XP_012857659.1| PREDICTED: uncharacterized protein LOC105976... 561 0.0
emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera] 569 0.0
ref|XP_010683397.1| PREDICTED: uncharacterized protein LOC104898... 538 e-172
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 548 e-168
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera] 524 e-162
gb|KYP68194.1| Retrovirus-related Pol polyprotein from transposo... 490 e-155
ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotei... 494 e-153
ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotei... 493 e-152
ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotei... 493 e-152
gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposo... 494 e-151
gb|KYP40999.1| Retrovirus-related Pol polyprotein from transposo... 481 e-150
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 487 e-148
ref|XP_004240625.1| PREDICTED: uncharacterized protein LOC101261... 471 e-147
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 482 e-146
gb|KYP64173.1| Retrovirus-related Pol polyprotein from transposo... 465 e-146
ref|XP_013709762.1| PREDICTED: uncharacterized protein LOC106413... 466 e-145
gb|KYP40816.1| Retrovirus-related Pol polyprotein from transposo... 473 e-144
emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera] 473 e-143
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 471 e-142
>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
Length = 1059
Score = 570 bits (1468), Expect = 0.0
Identities = 359/971 (36%), Positives = 520/971 (53%), Gaps = 45/971 (4%)
Frame = +3
Query: 195 DPLKLYSSDHPGLSLVTNQLTGNNYLSWRRSMLIALGAKTKLGFITGRIEVPEAGSP--K 368
+P L+ SDHPG+ LV+ L G+NY +W R+M I+L AK+KLGFI G +P A +
Sbjct: 16 NPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTMPSATDKPBE 75
Query: 369 YDQWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLEREIA 548
+ W+K + M++SWILNS+S +L ++ I+S +A+++W+D+ F N P I+Q+ER+IA
Sbjct: 76 HASWKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLRDHFSQSNAPRIFQIERDIA 135
Query: 549 SINQGSMSVVEYFTK*KRLWDELACLMPLPI-CDNEIRRLIDERDMNRKLVQFLMGLHES 725
+ Q M+V Y+T+ K+LWDEL C + +R R+L+QFLMGL+ES
Sbjct: 136 CLTQDQMTVXAYYTRLKKLWDELGSYNDTVCSCGADHKR--------RRLMQFLMGLNES 187
Query: 726 YDQVRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAMSTRINNFDRRNAGR 905
Y+ +R Q+LLM+PLP+V KAYS +++ KQR++ + E+ AM + R
Sbjct: 188 YNAIRGQILLMNPLPDVAKAYSSIVQEXKQRSLGAIR-ETTENSAMVVQ-----RAEPMA 241
Query: 906 GVMTGGRGPRTGDWNTGRGRGVYRRTKEEKEKLVCKHCTMTGHEIS*CFKLHGYPNWFKK 1085
+ G+G + R ++ L C +C H C+KL+GYP K
Sbjct: 242 LXVRXGQGSSS------------RSNPSNRKSLHCTYCDRDHHVRETCWKLNGYPPEHPK 289
Query: 1086 LREDRNALAKYSITNDFGGCEPQKDTHQLDIATLIK-----QEISKALAG---------- 1220
+R+ + G +++ A +K QE+ G
Sbjct: 290 HASNRS---------NHGSTHFKRNNSHQSSANNVKERPVMQEVPSMTNGLSDLQIQQIL 340
Query: 1221 RVQQGQNSSEQSMNFT*YTDFAGTILPLLNHHALTTLESLDKDSWILDTGASKHMCASPS 1400
+ QG+ ++ QS N +G + LL+ H L I+D+GA+ H+ +SP+
Sbjct: 341 SIMQGKGTT-QSTNPKANAAASGLLQTLLHLHRL-----------IIDSGATDHITSSPT 388
Query: 1401 LMQNLVPISSLVSICLPDGTTKVVTHSGQVAISSGLLLHDVLLVPSFKYNFLSIAQLTQ* 1580
L+ N + L + +P G +T G + ++S L +VL VPSFK + +S++++T+
Sbjct: 389 LLVNSRKNTFLPPVAMPSGEQAPITSIGNLPLNSAATLKNVLGVPSFKVDLMSVSRVTKD 448
Query: 1581 SHLKCLFFPSHCLIQDLRTEEVKDMGKVVGCLYVL------QISTXXXXXXXXXXXXXXX 1742
+ FFP C++QDL T +G+ LY L + T
Sbjct: 449 LNCSVTFFPHWCILQDLTTRTTIGLGEQRDGLYYLVALASEKPKTQTPSXXATSCRSPSS 508
Query: 1743 XXXXXXXXWHRRLGHAPLPVLKHLSFLKHLFANDASPSLDTCDVCHKSKQHRLPFPTSRI 1922
WH RLGH L ++ KHL N S + CDVC +KQ RLPF S I
Sbjct: 509 QVTSSTALWHXRLGHLSSSRLDFMA--KHLL-NFPFQSNNACDVCXLAKQRRLPFSVSSI 565
Query: 1923 QTSKCFDLVHIDVWGPYN*SSLTSTPFFLTLVDDFSRATWVFLMSHKSQVSRLLKQFLQM 2102
+ + F+L+H D WGPY +SL+ FLT+VDD+SR TWVF M HKS+ LL +F
Sbjct: 566 SSVRPFELIHCDXWGPYKIASLSGAKXFLTIVDDYSRFTWVFFMHHKSETQHLLVKFFSF 625
Query: 2103 VQTQFQASVKIVRSDNGTEFTSKECQEVFVSAGIIHQRSCVFTPQQNGIVERKHRHLLNV 2282
VQTQF S+ +R DNG EF S +E F G +Q SCV+T QQNG+VERKHRH+L
Sbjct: 626 VQTQFHVSIANIRVDNGGEFFSM--REFFKQKGTTYQHSCVYTSQQNGVVERKHRHILES 683
Query: 2283 ARALMFQSNLPSKFWPYSVLSAAYLINRIPSLLLNWRTPFELLHGTTPSYSHLKPFGCLS 2462
RA FQ++LP FW V +A ++INR+P+ LL+ +TPFE L+G PSYSH++ FGCL+
Sbjct: 684 TRAFRFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFERLYGKLPSYSHIRVFGCLA 743
Query: 2463 YATNTH-PHKSKFSTRAYRCVFLGYITGQKGYRLYDLDNHCLFSSRDVIFFEDNFPFSNI 2639
YATN H PH KF+ RA RC+FLGY GQK Y+LYDLD H +F+SRDV+F E FP+ +I
Sbjct: 744 YATNVHVPH--KFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHETIFPYESI 801
Query: 2640 EVPTDSVP--LPLISSDM------PDTPQPTAPSHTPS-----------AVPDPSHPLRR 2762
P+ + +PL SD+ P P+P +P PS A P P LRR
Sbjct: 802 PSPSSNSDPVIPLSISDLSPPVPQPSPPEPISPIQQPSLPNSVSTQPSPASPPPEPILRR 861
Query: 2763 STRVSHPPTWLSNFITNSATTFTS-LKFPSSLTDGPLFPISTFPFNYSSNLSDAHHVVLA 2939
S R HPP L +++ N T+ L SS +P+ F + + S H
Sbjct: 862 SQRPHHPPMALRDYVCNQVTSPNHLLPLSSSPQKSTCYPLCNFVSYH--HYSPQHRSFTT 919
Query: 2940 NVSLIQEPRTY 2972
VS EP +Y
Sbjct: 920 AVSQDIEPTSY 930
>ref|XP_012857659.1| PREDICTED: uncharacterized protein LOC105976934 [Erythranthe guttata]
Length = 944
Score = 561 bits (1447), Expect = 0.0
Identities = 362/981 (36%), Positives = 518/981 (52%), Gaps = 46/981 (4%)
Frame = +3
Query: 168 ARDEANYDDDPLKLYSSDHPGLSLVTNQLTGNNYLSWRRSMLIALGAKTKLGFITGRIEV 347
AR + P L+ SD PGL LV++ L +NY +W R+M+I+L K KLGFI G I
Sbjct: 3 ARSRIDDISSPYYLHPSDGPGLVLVSSLLREDNYAAWNRAMMISLTVKNKLGFIDGSITK 62
Query: 348 PEAGSPKY-DQWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPII 524
P A + W + + +VISWILN+IS ++ + +YS SA D+W+D+ RF NGP I
Sbjct: 63 PPADEALLLNAWVRNNSIVISWILNAISPDIQASVMYSESAHDIWNDLKIRFSQTNGPRI 122
Query: 525 YQLEREIASINQGSMSVVEYFTK*KRLWDELACLMPLPICDN----EIRRLIDERDMNRK 692
+QL RE+A++ Q SV YFTK K +WDEL P C + +L D +
Sbjct: 123 FQLRRELANLTQDQQSVNVYFTKLKAIWDELDNFRPTCTCGRCSCGGVDKLQDHHHIEH- 181
Query: 693 LVQFLMGLHESYDQVRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAMSTR 872
++ FLMGL++S R Q+LLMDPLP ++K +++V + E+ R+V +T + +H
Sbjct: 182 VMSFLMGLNDSLASTRGQILLMDPLPPINKVFALVSQEERHRSVAVTSSSDVQHSLAF-- 239
Query: 873 INNFDRRNAGRGVMTGG--RGPRTGDWNTGRGRGVYRRTKEEKEKLVCKHCTMTGHEIS* 1046
A RG+ T R P+ + Y T + K+K+ C HC TGH +
Sbjct: 240 --------AARGIQTNQFVRRPQNNQF--------YGTTSQRKDKIYCTHCHKTGHTVEK 283
Query: 1047 CFKLHGYPNWFKK-----LREDRNALAKYSI--------------TNDFGGCEPQKDTHQ 1169
C++LHG+P ++ + ++++ K+++ + P D
Sbjct: 284 CYRLHGFPPGYQPRQKPGMTSNQSSQTKFAVNQVSDIVHSDASLNSGSLSQSLPSSDNF- 342
Query: 1170 LDIATLIK-QEISKALAGRVQQGQNSSEQSMNFT*Y-TDFAGTILPLLNHHALTTLESLD 1343
LD T + Q++ ++ + N N + T + + +AL T S
Sbjct: 343 LDAMTASQCQQLLSYVSSHLANKANQPPHDKNSEIFDTSHISRVTGICLFNALHT-PSFM 401
Query: 1344 KDSWILDTGASKHMCASPSLMQNLVPISSLVSICLPDGTTKVVTHSGQVAISSGLLLHDV 1523
WILD+GAS+H+C + SL N+ +S+ + LPD + +V G V +++ L+LH+V
Sbjct: 402 PHHWILDSGASRHICHNKSLFLNMKSVSN-ARVVLPDSSMVLVNCIGDVQLTTHLVLHNV 460
Query: 1524 LLVPSFKYNFLSIAQLTQ*SHLKCLFFPSHCLIQDLRTEEVKDMGKVVGCLYVLQISTXX 1703
VP FK+N +S++ L S +F IQD ++ KV G LYVL
Sbjct: 461 FYVPEFKFNLVSVSALLHGSSYVVIFDEFSFSIQDRLMTQIGKGNKVQG-LYVLD----- 514
Query: 1704 XXXXXXXXXXXXXXXXXXXXXWHRRLGHAPLPVLKHLSFLKHLFANDASPSLDTCDVCHK 1883
WH RLGH P P L L+ L + S S C VC
Sbjct: 515 --PVSASPIEHAFCNKISATVWHHRLGHIPQPKLAFLAKKFSLSVDKISES-SCCYVCPL 571
Query: 1884 SKQHRLPFPTSRIQTSKCFDLVHIDVWGPYN*SSLTSTPFFLTLVDDFSRATWVFLMSHK 2063
+KQ RL F S ++ FDL+H D+WGP+ S + +F+TLVDD+SR TWV L+ K
Sbjct: 572 AKQKRLHFSNSSSVSTAMFDLIHCDIWGPFKVPSYSGFHYFVTLVDDYSRFTWVHLLKTK 631
Query: 2064 SQVSRLLKQFLQMVQTQFQASVKIVRSDNGTEFTSKECQEVFVSAGIIHQRSCVFTPQQN 2243
S+V ++ +FL+MV QF S+K+ RSDN E K +F G+IHQ SCV+TPQQN
Sbjct: 632 SEVITVVPRFLKMVLNQFGKSIKVFRSDNAYELQFKS---LFDELGVIHQFSCVYTPQQN 688
Query: 2244 GIVERKHRHLLNVARALMFQSNLPSKFWPYSVLSAAYLINRIPSLLLNWRTPFELLHGTT 2423
IVERKH+H+LNVAR+L FQS++P +W +L+A +LINRIP+ LN +P+ELL+
Sbjct: 689 AIVERKHQHILNVARSLFFQSHIPITYWSECILTAVFLINRIPAHNLNDLSPYELLYPAK 748
Query: 2424 P-SYSHLKPFGCLSYATNTHPHKSKFSTRAYRCVFLGYITGQKGYRLYDLDNHCLFSSRD 2600
P Y LK FGCL +AT+ HKSKF RA CVFLGY +G KGY+L DL +H +F SRD
Sbjct: 749 PFDYHSLKSFGCLVFATDVSGHKSKFDPRANACVFLGYPSGIKGYKLLDLVSHKVFISRD 808
Query: 2601 VIFFEDNFPFSNIE-----VPTDSVPLP----------LISSDMPDTPQPTAPSHTPSAV 2735
VIF E+ +PF+N + TD PLP IS P P +PS +
Sbjct: 809 VIFHENIYPFTNKSSSSEFISTDFSPLPPSVIPSFHHDSISEPYPSVSVSVPPISSPSNM 868
Query: 2736 P--DPSHPLRRSTRVSHPPTWLSNFITNSATTFTSLKFPSSLTDGPLFPISTFPFNYSSN 2909
P P PLR+S+R PPT+LS+F N+ TT T PL+PIS F S
Sbjct: 869 PVVQPIVPLRKSSRHIKPPTYLSDFKCNAVTTST-----------PLYPIS--KFTDLSQ 915
Query: 2910 LSDAHHVVLANVSLIQEPRTY 2972
LS ++ + N+S EP TY
Sbjct: 916 LSPSYQTFILNISDEDEPATY 936
>emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
Length = 1236
Score = 569 bits (1467), Expect = 0.0
Identities = 352/941 (37%), Positives = 512/941 (54%), Gaps = 31/941 (3%)
Frame = +3
Query: 195 DPLKLYSSDHPGLSLVTNQLTGNNYLSWRRSMLIALGAKTKLGFITGRIEVPEAGSPKYD 374
+P L+ SDHPG+ L++ L G+NY +W R+M I+L AK+KLGFI G +P A + K D
Sbjct: 16 NPYFLHHSDHPGIVLISKPLNGDNYWTWCRAMTISLNAKSKLGFIDGTTTMPSA-TDKPD 74
Query: 375 Q---WRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLEREI 545
+ W+K + M++SWILNS+S +L ++ I+S +A+++W+D+ RF N P I+Q+ER+I
Sbjct: 75 EHALWKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLRDRFSQTNAPHIFQIERDI 134
Query: 546 ASINQGSMSVVEYFTK*KRLWDELACLMPLPI-CDNEIRRLIDERDMNRKLVQFLMGLHE 722
A + Q M+V Y+T+ K+LWDEL C + +R R+L+QFLMGL+E
Sbjct: 135 ACLTQDQMTVAAYYTRLKKLWDELGSYNDTVCSCGADHKR--------RRLMQFLMGLNE 186
Query: 723 SYDQVRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAMSTRINNFDRRNAG 902
SY+ +R Q+LLM+PLP+V KAYS +++ EKQR++ T + E+ AM R R
Sbjct: 187 SYNAIRGQILLMNPLPDVAKAYSSIVQEEKQRSLGATR-EMTENSAMVIR-----RAEPM 240
Query: 903 RGVMTGGRGPRTGDWNTGRGRGVYRRTKEEKEKLVCKHCTMTGHEIS*CFKLHGYPNWFK 1082
V+ G+G + R ++ L C +C H C+KL+GYP
Sbjct: 241 ALVVRHGQGSSS------------RSNPSNRKPLHCSYCDRDHHVRETCWKLNGYPPEHP 288
Query: 1083 KLREDRNALAKYSITNDFGGCEPQKDTHQLDIATLIKQEISKALAGRVQQGQNSSEQSMN 1262
K +R+ + G +++ A +K+ + + V N
Sbjct: 289 KHASNRS---------NHGSTHFKRNNSHQSSANNVKE---RPVMQEVPSMTNGLSDLQI 336
Query: 1263 FT*YTDFAGTILPLLNHHALTTLESLDKDSWILDTGASKHMCASPSLMQNLVPISSLVSI 1442
+ G + LL+ H L I+D+GA+ H+ +SP+L+ N + L +
Sbjct: 337 QQILSIMQGLLQTLLHLHRL-----------IIDSGATYHITSSPTLLVNSSKNTFLPLV 385
Query: 1443 CLPDGTTKVVTHSGQVAISSGLLLHDVLLVPSFKYNFLSIAQLTQ*SHLKCLFFPSHCLI 1622
+P G +T G + ++ + L + L VPSFK + +S++++T+ + FFP C++
Sbjct: 386 AMPSGEQAPITSIGNLPLNYVVTLKNALGVPSFKVDLMSVSRVTKDLNCSVTFFPHWCIL 445
Query: 1623 QDLRTEEVKDMGKVVGCLYVL------QISTXXXXXXXXXXXXXXXXXXXXXXXWHRRLG 1784
QDL T +G+ LY L + T WHR LG
Sbjct: 446 QDLTTRTTIGLGEQRDGLYYLVALASKKPKTQTPSAAATSCRSPSSQVTSSTALWHRCLG 505
Query: 1785 HAPLPVLKHLSFLKHLFANDASPSLDTCDVCHKSKQHRLPFPTSRIQTSKCFDLVHIDVW 1964
H L ++ KHL N S + CDVC +KQ RLPF S I + + F+L+H D+W
Sbjct: 506 HLSSSRLDFMA--KHLL-NFPFQSNNACDVCALAKQRRLPFSVSSISSVRPFELIHCDIW 562
Query: 1965 GPYN*SSLTSTPFFLTLVDDFSRATWVFLMSHKSQVSRLLKQFLQMVQTQFQASVKIVRS 2144
GPY +SL+S +FLT+VDD+SR TWVF M HKS+ LL F VQTQF S+ +R
Sbjct: 563 GPYKIASLSSAKYFLTIVDDYSRFTWVFFMHHKSETQHLLVNFFSFVQTQFHVSIANIRV 622
Query: 2145 DNGTEFTSKECQEVFVSAGIIHQRSCVFTPQQNGIVERKHRHLLNVARALMFQSNLPSKF 2324
DNG EF S +E F G +Q SCV+TPQQNG+VERKH H+L ARA FQ++LP F
Sbjct: 623 DNGGEFFSM--REFFKQKGTTYQHSCVYTPQQNGVVERKHCHILESARAFHFQAHLPLPF 680
Query: 2325 WPYSVLSAAYLINRIPSLLLNWRTPFELLHGTTPSYSHLKPFGCLSYATNTH-PHKSKFS 2501
W V + ++INR+P+ LL+ +TPFE L+G PSYSH++ FGCL+YATN H PH KF+
Sbjct: 681 WAECVSTVVHIINRLPTPLLSRQTPFERLYGKLPSYSHIRVFGCLAYATNVHIPH--KFA 738
Query: 2502 TRAYRCVFLGYITGQKGYRLYDLDNHCLFSSRDVIFFEDNFPFSNIEVPTDSVP--LPLI 2675
RA RC+FLGY GQK Y+LYDLD H +F+SRDV+F E FP+ +I P+ + +PL
Sbjct: 739 PRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHETIFPYESIPSPSSNSDPVIPLS 798
Query: 2676 SSDM------PDTPQPTAPSHTP------SAVPDPSHP-----LRRSTRVSHPPTWLSNF 2804
SD+ P P+P +P P S P P+ P LRRS R HPP L ++
Sbjct: 799 ISDLSPPVQQPSPPEPISPIQQPSLPNSVSTQPSPTSPPPEPILRRSQRPHHPPMALRDY 858
Query: 2805 ITNSATTFTSLKFPSSLTDGPLFPISTF-PFNYSSNLSDAH 2924
+ N T FP+ L P P +Y+ S +H
Sbjct: 859 VCNQVT------FPNHLPPLSSSPQKDIEPTSYAEAASHSH 893
>ref|XP_010683397.1| PREDICTED: uncharacterized protein LOC104898087 [Beta vulgaris subsp.
vulgaris]
Length = 1038
Score = 538 bits (1385), Expect = e-172
Identities = 360/1002 (35%), Positives = 514/1002 (51%), Gaps = 76/1002 (7%)
Frame = +3
Query: 195 DPLKLYSSDHPGLSLVTNQLTGNNYLSWRRSMLIALGAKTKLGFITGRIEVPEAGSPKYD 374
D L S D P L T++L G+N+L+W R + +ALGAK KL FI G+ P + S +
Sbjct: 21 DKYFLGSGDQPDQHLGTHKLNGDNFLTWNRGIRLALGAKNKLTFIDGKTPRPPSDSEELQ 80
Query: 375 QWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLEREIASI 554
+W + D M+ SW+LNS+ + E FI SA L+++I +R+G N P +++L + ++SI
Sbjct: 81 KWMRNDYMIQSWLLNSMDKLIAEGFILQQSANQLYEEILERYGQSNAPQLFELHKHLSSI 140
Query: 555 NQGSMSVVEYFTK*KRLWDELACLMPLPICDNE--------IRRLIDERDMNRKLVQFLM 710
+QGS S+V+Y++K KR+WDE+ L P CD I + + D +KL+Q L+
Sbjct: 141 HQGSDSIVQYYSKLKRVWDEIQLLDGFPDCDCGALAKCSCVILKKVLAADQKQKLIQLLV 200
Query: 711 GLHESYDQVRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAM-STRINNFD 887
GL YD V + +L MDPLPNV++AY ++L+VE+Q +++ + + A S + + F
Sbjct: 201 GLDRGYDTVTTNILSMDPLPNVNRAYYMLLQVERQTRLNIQQDTSLQTSAFNSMKQSGFQ 260
Query: 888 RRNAGRGVMTGGRGPRTGDWNTGRGRGVYRRTKEEKEKLVCKHCTMTGHEIS*CFKLHG- 1064
NA R R G +R K +K C +C +GH + CFKL G
Sbjct: 261 HNNAHIHPSQPER--RDG-----------KRIKYDKASRKCDYCKKSGHTMDQCFKLTGV 307
Query: 1065 YPNWF-----KKLREDRNALAKYSITNDFGGC--------EPQKDTHQ----LDIATL-- 1187
YP WF K L + + + G C P +HQ +D A +
Sbjct: 308 YPEWFLNMKNKSLPTSSTSKLAAHVGDTTGECLGATPLDIVPSYHSHQPSAQVDSALVQA 367
Query: 1188 IKQEISKALAGRVQQGQNSSEQSMNFT*YTDFAGTILPLLNHHALTTLESLDKDSWILDT 1367
+ +E+ K + G+ Q + S+NF AG I+ + ++++ +S DK +WI+DT
Sbjct: 368 VYKEMLKMVKGQPHQAPSEFTSSVNF------AG-IMSVSTVNSVS--QSHDKFAWIVDT 418
Query: 1368 GASKHMCASPSLMQNLVPISSLVSICLPDGTTKVVTHSGQVAISSGLLLHDVLLVPSFKY 1547
GA+ HM SL + + + + + LPDGTTKVV +G V +++ ++L DVLL+P F +
Sbjct: 419 GATDHMIWDRSLYTSFTSLITPIKVGLPDGTTKVVYITGIVHLTAKIILKDVLLIPDFTH 478
Query: 1548 NFLSIAQLTQ*SHLKCLFFPSHCLIQDLRTEEVKDMGKVVGCLY----VLQISTXXXXXX 1715
N LS ++L ++L +F S QD T+E++ +G LY V +S+
Sbjct: 479 NLLSFSKLLSQNNLLAIFTSSSYHFQDPTTKEIQAIGSQQAGLYKFSSVPTVSSDVSSSC 538
Query: 1716 XXXXXXXXXXXXXXXXXWHRRLGHAPLPVLKHLSFLKHLFANDASPSLDTCDVCHKSKQH 1895
H RL H + LS L + S C+ C +K H
Sbjct: 539 FNKSFHVDTSVPNFSTL-HARLCHLSTQTMSKLS----LPYKPNNTSDFCCEPCVFAKSH 593
Query: 1896 RLPFPTSRIQTSKCFDLVHIDVWGPYN*SSLTSTPFFLTLVDDFSRATWVFLMSHKSQVS 2075
PFP S F LVH+D+WGPY SL+ +FLT++DD+SR TW L+S KSQV
Sbjct: 594 STPFPVSHSHAGAIFQLVHVDLWGPYRQPSLSGACYFLTILDDYSRTTWTHLVSSKSQVP 653
Query: 2076 RLLKQFLQMVQTQFQASVKIVRSDNGTEFTSKECQEVFVSAGIIHQRSCVFTPQQNGIVE 2255
LL++F+ V+ F S+KI+RSDNGTE C +F S GIIHQRS PQQNG VE
Sbjct: 654 TLLQEFIAYVENHFNTSIKIIRSDNGTEIFQAVCTHLFASKGIIHQRSLPGKPQQNGRVE 713
Query: 2256 RKHRHLLNVARALMFQSNLPSKFWPYSVLSAAYLINRIPSLLLNWRTPFELLHGTTPSYS 2435
RKH+HLL ARAL F ++LP KFW +L+A YLIN +PS +L W+TP+E L PSY
Sbjct: 714 RKHKHLLETARALTFHASLPKKFWGECLLAATYLINLMPSSVLQWKTPYEFLMKLVPSYE 773
Query: 2436 HLKPFGCLSYATNTHPHKSKFSTRAYRCVFLGYITGQKGYRLYDLDNHCLFSSRDVIFFE 2615
HL+ GCL YA + KF+ RA +CVFLGY GQKGY+LYDL++H +F SRDV F E
Sbjct: 774 HLRVIGCLCYA--SIKTFDKFAPRARKCVFLGYPYGQKGYKLYDLESHKIFLSRDVKFQE 831
Query: 2616 DNFPFS------------------NIEVPTDSVPL------------PLISSD------- 2684
FPF+ N + D +P PL +D
Sbjct: 832 HVFPFAQSSSVSSESIHSISSPMVNPGIHDDDIPFFFSPSHTQPISSPLSMNDHSSHPTL 891
Query: 2685 --MPDTPQPTA----PSHTPSAVPDPSHPLRRSTRVSHPPTWLSNFITNSATTFTSLKFP 2846
P T PTA HT + + PLRRS R P T L +F+ S+ P
Sbjct: 892 TTSPPTSSPTANTSPTDHTSVSSSSGAPPLRRSLRHKLPSTKLKDFVVPSS------HLP 945
Query: 2847 SSLTDGPLFPISTFPFNYSSNLSDAHHVVLANVSLIQEPRTY 2972
SS F + T P + S LANV EP +Y
Sbjct: 946 SSSLSSS-FNVFTCP--ELQHFSPTSFASLANVLSHVEPSSY 984
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 548 bits (1411), Expect = e-168
Identities = 352/994 (35%), Positives = 515/994 (51%), Gaps = 69/994 (6%)
Frame = +3
Query: 198 PLKLYSSDHPGLSLVTNQLTGNNYLSWRRSMLIALGAKTKLGFITGRIEVPEAGSPKY-- 371
PL ++ SD PG LV +L G NY SW ++++ AL K K+GF+ G +E P +
Sbjct: 302 PLYIHHSDQPGHVLVPIKLNGVNYQSWSKAVIHALTTKKKIGFVDGTVEEPSQEDEPFMF 361
Query: 372 DQWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLEREIAS 551
+QW + + M++SW+ +++ +++ E I++ +A+++W D+ +F N P ++Q+++ IA+
Sbjct: 362 EQWNQCNSMILSWLTHAVESDIAEGIIHAKTAREVWVDLRDQFSQKNAPAVFQIQKSIAT 421
Query: 552 INQGSMSVVEYFTK*KRLWDELACLMPLPICDNEIRRLIDERDMNRKLVQFLMGLHESYD 731
++QG+M+V YFTK K LWDEL P+ N+ + +++R+ +R L+QFLMGL+ESY
Sbjct: 422 MSQGTMTVAAYFTKIKALWDELETYRS-PLTCNQRQAHLEQREEDR-LMQFLMGLNESYK 479
Query: 732 QVRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAMSTRINNFDRRNAGRGV 911
VRS +L+M PLPNV +AYS++++ E QR V S NF A G
Sbjct: 480 AVRSNILMMSPLPNVRQAYSLIVQEEMQRQVS------------SEPTENFSIAAAVPGK 527
Query: 912 MTGGRGPRTGDWNTGRGRGVYRRTKEEKEKLVCKHCTMTGHEIS*CFKLHGYPNWFKKL- 1088
G PR + +C HC +GH I C L + + K
Sbjct: 528 ---GGNPR---------------------QKMCDHCNRSGHTIDECRTLKFHCKFCDKRG 563
Query: 1089 -REDRNALAKYSI--TNDFGGCEPQKDTHQLDIATLIKQEISKALAGRVQQGQNSSEQSM 1259
EDR L S T F G P +Q QE+S + + QG + +
Sbjct: 564 HTEDRCRLKNGSNNKTGQFRGQRPFGRGNQPSANATESQEMSDSTSSSTVQGFTTEQIQQ 623
Query: 1260 NFT*YTDFAGTILPLLNHHALTTLESLDKDSWILDTGASKHMCASPSLMQNLVPISSLVS 1439
+ LNH S + D++ GA+ H+ + SL +L P S++ +
Sbjct: 624 --------LAQAIRALNHS-----NSGNIDAYANAAGATDHIVSHMSLFTDLKP-SNVTT 669
Query: 1440 ICLPDGTTKVVTHSGQVAISSGLLLHDVLLVPSFKYNFLSIAQLTQ*SHLKCLFFPSHCL 1619
+ LP+G +TH+G V S L L DVL VPSF N +S ++L + + +FFP +C+
Sbjct: 670 VNLPNGVASPITHTGTVIFDSQLTLKDVLCVPSFNLNLISASKLAKDQNCYIIFFPDYCI 729
Query: 1620 IQDLRTEEVKDMGKVVGCLYVLQISTXXXXXXXXXXXXXXXXXXXXXXXWHRRLGHAPLP 1799
+QDL + ++ GK G LY + ST WH RLGH P
Sbjct: 730 LQDLVSGKMIGSGKQRGGLYYMHPSTNKSVVFHVSQPSDL---------WHLRLGH---P 777
Query: 1800 VLKHLSFLKHLFANDASPSLDTCDVCHKSKQHRLPFPTSRIQTSKCFDLVHIDVWGPYN* 1979
L L + + C +C ++KQ RLPFP S I T F L+H DVWGP+
Sbjct: 778 SFSRFKLLSRLLPDIHKEIGNHCPICPQAKQTRLPFPKSSITTKFPFSLLHCDVWGPHKI 837
Query: 1980 SSLTSTPFFLTLVDDFSRATWVFLMSHKSQVSRLLKQFLQMVQTQFQASVKIVRSDNGTE 2159
+ T + +FLT+VDDFSR TW+FLM HKS+ LL F+Q V+TQF V+ VR DNGTE
Sbjct: 838 PAHTGSRYFLTIVDDFSRCTWIFLMHHKSETQSLLTNFVQFVKTQFHTDVQTVRMDNGTE 897
Query: 2160 FTSKECQEVFV-SAGIIHQRSCVFTPQQNGIVERKHRHLLNVARALMFQSNLPSKFWPYS 2336
F +F+ + GI Q SC++TPQQNG+VERKHRH+LNVAR+LMFQSN+P +FW
Sbjct: 898 FIPLR---IFLQNKGIELQTSCIYTPQQNGVVERKHRHILNVARSLMFQSNVPLEFWGEC 954
Query: 2337 VLSAAYLINRIPSLLLNWRTPFELLHGTTPSYSHLKPFGCLSYATNTHPHKSKFSTRAYR 2516
VL+A YLINRIP+ LL+ ++PFE+L+ PS +HL+ FGC Y TN HP K KF RA
Sbjct: 955 VLTAVYLINRIPTPLLSNKSPFEVLYNRPPSLTHLRVFGCECYVTNVHP-KQKFDPRASI 1013
Query: 2517 CVFLGYITGQKGYRLYDLDNHCLFSSRDVIFFEDNFPF----SNIEVPTDSVPLPL---- 2672
CVFLGY G+KGY++ DL + SRDV F E+ FPF S + + S+PLPL
Sbjct: 1014 CVFLGYPHGKKGYKVLDLQTQKISVSRDVFFRENIFPFHSSSSQSQQHSPSLPLPLPISF 1073
Query: 2673 --------------------------------------------ISSDMPDTPQPTAPSH 2720
++S +P +P P++ S
Sbjct: 1074 DSTPQPISLPRFSPSSTPPLSHHNPVSSPPSSNTDVPEPLSHESVASPLPSSPSPSSLSS 1133
Query: 2721 TPS--------AVPDPSH--PLRRSTRVSHPPTWLSNFITNSATTFTSLKFPSSLTDGPL 2870
PS + P P+H PLRRSTR PP W +++ ++ +S + SS G
Sbjct: 1134 PPSVPLVPSNTSAPSPTHEPPLRRSTRHIQPPAWHHDYVMSAQLNHSSTQ--SSSRQGTR 1191
Query: 2871 FPISTFPFNYSSNLSDAHHVVLANVSLIQEPRTY 2972
+P+S+ + S H LA ++ EP ++
Sbjct: 1192 YPLSSHLSFF--RFSPHHRAFLALLTAQTEPSSF 1223
>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
Length = 1498
Score = 524 bits (1350), Expect = e-162
Identities = 334/941 (35%), Positives = 490/941 (52%), Gaps = 48/941 (5%)
Frame = +3
Query: 195 DPLKLYSSDHPGLSLVTNQLTGNNYLSWRRSMLIALGAKTKLGFITGRIEVP--EAGSPK 368
+P + SDHPGL L++ L G+NY +W+R+M++AL +K KLGF+ G I+ P E
Sbjct: 17 NPYFTHHSDHPGLVLISKSLNGDNYSAWKRAMILALNSKNKLGFVNGSIKAPSEEIDPEG 76
Query: 369 YDQWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLEREIA 548
Y W + + MV SWI+N+++ + + IY ++A ++W+D+ +RF N P I++++R+IA
Sbjct: 77 YATWSRCNDMVHSWIVNTLNPEIANSVIYYSTAHEVWEDLCERFSQSNAPRIFEIQRDIA 136
Query: 549 SINQGSMSVVEYFTK*KRLWDELACLMPLPICDNEIRRLIDERDMNRKLVQFLMGLHESY 728
+ Q +SV Y+TK K LWDELA + +KL+QFLMGL+ESY
Sbjct: 137 CLRQEQLSVSAYYTKLKGLWDELASYNAAAH---------GAQQDQQKLMQFLMGLNESY 187
Query: 729 DQVRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYI--DNNEHVAMSTRINN------- 881
+R Q+LLM+PLP+V +AYS + + EKQR + T ++ AM+ R N
Sbjct: 188 SVIRGQILLMNPLPSVRQAYSTISQEEKQRLLTSTNAAAESAASAAMAVRSNGKSLTTWK 247
Query: 882 --FDRRNAGRGVMT----GGRGPRTGDWNTGR-GRGVY----RRTKEEKEKLVCKHCTMT 1028
DR N R T G + + G+ GR + RR + + C +C
Sbjct: 248 DGIDRSNTRRMEPTNRPSGSQNFLENRSSQGQDGRPFFDQDRRRIGSGRGRPQCSYCGDM 307
Query: 1029 GHEIS*CFKLHGYPNWFKKLR----EDRNALAKYSITNDFGGCEPQKDTHQLDIATLIKQ 1196
GH + CF+LHGYP K R + N +S TN + K L +
Sbjct: 308 GHWVQKCFQLHGYPPDHPKARMNLGSNSNRNKSFSATNQVSEADEGKPA-----VALSEA 362
Query: 1197 EISKALAGRVQQGQNSSEQSMNFT*YTDFAGTILPLLNHHALTTLESLDKDSWILDTGAS 1376
++ + L+ Q +NSS + +N L + +WI+D+GA+
Sbjct: 363 QLKQLLSLLNNQDENSSSK-----------------VNAVTKPGLSKVASRNWIIDSGAT 405
Query: 1377 KHMCASPSLMQNLVPISSLVSICLPDGTTKVVTHSGQVAISSGLLLHDVLLVPSFKYNFL 1556
H+ +S L+ SL + LP G + G + ++S LHDVL VP+FK + +
Sbjct: 406 DHITSSSKLLHK-DKNCSLPLVLLPSGEKANIVTKGTLPLNSVYYLHDVLSVPTFKVDLI 464
Query: 1557 SIAQLTQ*SHLKCLFFPSHCLIQDLRTEEVKDMGKVVGCLY---VLQISTXXXXXXXXXX 1727
S+++LT+ + FFP C++QDL T +GK LY L
Sbjct: 465 SVSRLTKGLNCSVTFFPYWCILQDLATRRTIGLGKQRDRLYYLVALATEKSLTNHSSSTN 524
Query: 1728 XXXXXXXXXXXXXWHRRLGHAPLPVLKHLSFLKHLFANDASPSLDTCDVCHKSKQHRLPF 1907
WH RLGH S + C +C +KQ RLPF
Sbjct: 525 QPACNLAISSTDLWHSRLGH----------------------SNNACPICPLAKQSRLPF 562
Query: 1908 PTSRIQTSKCFDLVHIDVWGPYN*SSLTSTPFFLTLVDDFSRATWVFLMSHKSQVSRLLK 2087
TS I ++K F+++H D+WG Y SL +FLT+VDD++R TW+FLM HK + LLK
Sbjct: 563 GTSAISSTKPFEIIHCDIWGRYRHPSLFGAHYFLTIVDDYTRFTWIFLMRHKDEAQSLLK 622
Query: 2088 QFLQMVQTQFQASVKIVRSDNGTEFTSKECQEVFVSAGIIHQRSCVFTPQQNGIVERKHR 2267
+F V TQF+ +K RSDN EFTS + F G+I Q SCV+TPQQNG+VERKHR
Sbjct: 623 RFFSYVFTQFEFRIKTFRSDNXXEFTS--LRSFFQDNGVIFQHSCVYTPQQNGVVERKHR 680
Query: 2268 HLLNVARALMFQSNLPSKFWPYSVLSAAYLINRIPSLLLNWRTPFELLHGTTPSYSHLKP 2447
H+L VARAL F + +P++FW L+A ++INR+ S +L+++TPFELL+ +P YSHL+
Sbjct: 681 HILQVARALKFHAQVPTQFWGECALTAVHIINRLXSPILSFKTPFELLYLKSPXYSHLRV 740
Query: 2448 FGCLSYATNTHPHKSKFSTRAYRCVFLGYITGQKGYRLYDLDNHCLFSSRDVIFFEDNFP 2627
FGCL+YATN H KF RA +F+GY GQK Y+L+DL +F+SRDV F ED FP
Sbjct: 741 FGCLAYATNVHT-SHKFDYRAMPSIFIGYPVGQKAYKLFDLSTKKVFTSRDVKFHEDIFP 799
Query: 2628 F----SNIEVPT---DSVPLPLISSDMPDT-------PQPTAPSHTPSAVP-----DPSH 2750
+ N +P+ +S P+PL++ D+ + P +HT + P D S
Sbjct: 800 YVSLKPNXTLPSLTHNSGPIPLVAHDISSSFDSTSHALSPLLSNHTSTXSPXTENDDFSS 859
Query: 2751 PLRRSTRVSHPPTWLSNFITNSATTFTSLKFPSSLTDGPLF 2873
P R S + P + + S + T+L PSS GP F
Sbjct: 860 PSRPSELIIEPSSQIDP--NPSPSPSTTLVSPSS---GPPF 895
>gb|KYP68194.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 914
Score = 490 bits (1262), Expect = e-155
Identities = 308/885 (34%), Positives = 467/885 (52%), Gaps = 25/885 (2%)
Frame = +3
Query: 177 EANYDDDPLKLYSSDHPGLSLVTNQLTGNNYLSWRRSMLIALGAKTKLGFITGRIEVPEA 356
+A + L ++ ++ P LV+ LT NY SW R+M ++L K KLGF+ G I P
Sbjct: 13 DAQNASNSLYIHPNESPSTVLVSPPLTDGNYHSWSRAMKMSLLTKNKLGFVDGTIAEPPK 72
Query: 357 GSPKYDQWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLE 536
+ + W + + +V+SW++ S+S + ++ ++ A D+W ++ +RF + I +++
Sbjct: 73 ENAVFPFWERGNMLVLSWLIKSMSVEIAQSILWREKASDVWKELRERFSHADLFRISEIQ 132
Query: 537 REIASINQGSMSVVEYFTK*KRLWDELACLMPLPICD-------NEIRRLIDERDMNRKL 695
EI S QG SV +++T K LWDEL L PLP+C I+++ +ER+ N+ +
Sbjct: 133 EEIFSQRQGDDSVSKFYTALKTLWDELDVLNPLPVCTCNPKCSCGAIKKIEEERNKNQ-V 191
Query: 696 VQFLMGLHESYDQVRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAMSTRI 875
V+FL GL++ Y VRSQL+L+D LPNV++ +++V + E+Q + N +V + +
Sbjct: 192 VRFLRGLNDQYSGVRSQLMLLDNLPNVNRVFALVAQQERQ------FATENAYVPKALIV 245
Query: 876 NNFDRRNAGRGVMTGGRGPRTGDWNTGRGRGVYRRTKEEKEKLVCKHCTMTGHEIS*CFK 1055
+ D ++ R N G G G R +K C C GH I C++
Sbjct: 246 ASDDASHSKR--------------NQGNGNGWNNRYTSKK----CSWCGKMGHTIDVCYR 287
Query: 1056 LHGYPNWFKKLREDRNAL---AKYSITNDFGGCEPQ----KDTHQLDIATLIKQEISKAL 1214
HG+P FK + +N + A +T + P+ KDT + + L
Sbjct: 288 KHGFPAGFK-FKNSKNIVPRSANMLMTEENETNCPEDSSGKDTQESVRFGFTANQYQNLL 346
Query: 1215 AGRVQQGQNSSEQSMNFT*YTDFAGTILPLLNHHALTTLESLDKDSWILDTGASKHMCAS 1394
A QQ Q S Q T + + P N + L + WILDTGA+ H+ S
Sbjct: 347 ALLPQQDQRDSTQH---TAHVNAFTNSNPTRNGNVLIS-------RWILDTGATDHISNS 396
Query: 1395 PSLM---QNLVPISSLVSICLPDGTTKVVTHSGQVAISSGLLLHDVLLVPSFKYNFLSIA 1565
S +N+ PI + LP+G T SG + +SS +L DVL + S K+N +S+
Sbjct: 397 LSYFTAYKNIPPIK----VSLPNGILVSDTISGTIHLSSSFVLTDVLFLLSLKFNLISVT 452
Query: 1566 QLTQ*SHLKCLFFPSHCLIQDLRTEEVKDMGKVVGCLYVL-QI--STXXXXXXXXXXXXX 1736
+LTQ H K F CLIQD ++ K LY+ QI S+
Sbjct: 453 KLTQTLHCKLTFLDDICLIQDSNACKMIGTAKAERGLYIFTQIVESSQSSVYSTISENFS 512
Query: 1737 XXXXXXXXXXWHRRLGHAPLPVLKHLSFLKHLFANDASPSLDTCDVCHKSKQHRLPFPTS 1916
WH RLGH P L +F CD+CH +KQ +L FP S
Sbjct: 513 CNFPSSLPNLWHYRLGH---PCFDRSQALSEMFPFIYCNKNHVCDICHIAKQRKLSFPLS 569
Query: 1917 RIQTSKCFDLVHIDVWGPYN*SSLTSTPFFLTLVDDFSRATWVFLMSHKSQVSRLLKQFL 2096
T+ F+L+H D+WGP S+ +FLT+VDD+SR TW++L+ +K++V L++ F
Sbjct: 570 SSSTNTIFELIHADIWGPVFVMSIHGHSYFLTIVDDYSRHTWIYLLKNKAEVRPLIQAFC 629
Query: 2097 QMVQTQFQASVKIVRSDNGTEFTSKECQEVFVSAGIIHQRSCVFTPQQNGIVERKHRHLL 2276
+V+ QFQ +VK +R+DNG EF + + + + GI+HQ SCV TPQQN IVERKH+H+L
Sbjct: 630 ALVENQFQTTVKTIRTDNGKEF---KFDQFYATKGIVHQTSCVETPQQNSIVERKHQHIL 686
Query: 2277 NVARALMFQSNLPSKFWPYSVLSAAYLINRIPSLLLNWRTPFELLHGTTPSYSHLKPFGC 2456
NVARAL+FQ+NLP FW Y+V + YLINRIP+ +L+ + P++LL+ P + LK FG
Sbjct: 687 NVARALLFQANLPKIFWSYAVTHSVYLINRIPTPVLDNKCPYQLLYKCLPDLTQLKVFGS 746
Query: 2457 LSYATNTHPHKSKFSTRAYRCVFLGYITGQKGYRLYDLDNHCLFSSRDVIFFEDNFPFSN 2636
L +++ H++KF RA RC+FLGY +G KGY +YDL L SR+V+F E+ FP+
Sbjct: 747 LCFSSTLVSHRTKFDPRATRCIFLGYKSGTKGYIVYDLKTRELSVSRNVVFHENIFPY-Q 805
Query: 2637 IEVPTD-----SVPLPLISSDMPDTPQPTAPSHTPSAVPDPSHPL 2756
++ PT+ S+PLP +P P T S P +PL
Sbjct: 806 LKSPTNATSNSSIPLPTF---IPTEPFDYTQPQTESEPEIPQNPL 847
>ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X2 [Tarenaya hassleriana]
Length = 1244
Score = 494 bits (1273), Expect = e-153
Identities = 333/973 (34%), Positives = 487/973 (50%), Gaps = 47/973 (4%)
Frame = +3
Query: 195 DPLKLYSSDHPGLSLVTNQLTGN-NYLSWRRSMLIALGAKTKLGFITGRIEVPEAGSPKY 371
DPL L+++D + LV+ +L G NY W R++ AL AK KLGFI G I P
Sbjct: 36 DPLFLHAADSSSVFLVSEKLHGEANYGVWSRAVRKALLAKNKLGFILGTIPQPVDDEEDS 95
Query: 372 DQWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLEREIAS 551
W + + MV +W+ NS+ +++ Y A ++W + F N +Y ++ +I S
Sbjct: 96 GSWLRCNAMVCTWLSNSVDPDILTLISYMEDAHEIWMHLQNCFLQTNVSKLYSIQHQIDS 155
Query: 552 INQGSMSVVEYFTK*KRLWDELACLMPLPICDNE-------IRRLIDERDM---NRKLVQ 701
+ QGS+++ YFTK LW EL PLP+C + R+ D+ R +V+
Sbjct: 156 LYQGSLNLNSYFTKLNALWKELKHFEPLPVCSCKGCTCGGCKCRISDQWSALFERRSVVR 215
Query: 702 FLMGLHESYDQVRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAMSTRINN 881
FLM L++S+ R Q+L+ DPLP++ +AY++V + E+Q+ L + VA ST N+
Sbjct: 216 FLMRLNDSFSAARRQILMSDPLPDLTRAYNLVAQEEQQK---LNVSCLPDAVAFSTTTNS 272
Query: 882 FDRRNAGRGVMTGGRGPRTGDWNTG--RGRGVYRRTKEEKEKLVCKHCTMTGHEIS*CFK 1055
R P + + + Y T + + +C HC MTGH +S CF+
Sbjct: 273 -------------SRSPYSFPSSNPPPKSPSPYPSTSSNRPRPICTHCGMTGHVVSRCFR 319
Query: 1056 LHGYPNWFKKLREDRNALAKYSITNDFGGCEPQK----DTHQLDIATLIKQEISKALAGR 1223
LHGYP K + N G K + Q + +L+ Q +S+
Sbjct: 320 LHGYPPGHKS----------HPNWNSRSGPPRPKSQSLEKAQNQVHSLLSQLLSQ----- 364
Query: 1224 VQQGQNSSEQSMNFT*YTDFAGTILPLLNHHALTTLES---LDKDSWILDTGASKHMCAS 1394
+GQ S NF + + I L+ + LTT S WILDTGAS H+C +
Sbjct: 365 -HKGQGSVSLDSNFAVPSPPSPGI-SLVTYPLLTTSPSNITFPTAVWILDTGASTHVCCN 422
Query: 1395 PSLMQNLVPISSLVSICLPDGTTKVVTHSGQVAISSGLLLHDVLLVPSFKYNFLSIAQLT 1574
L + I +VS+ LP+G++ VT +G V +SS + L VL +P+F YN LS++ LT
Sbjct: 423 LGLFSEVHDIP-VVSVSLPNGSSLKVTQAGTVLLSSSITLSSVLFIPTFHYNLLSVSCLT 481
Query: 1575 Q*SHLKCLFFPSHCLIQDLRTEEVKDMGKVVGCLYVLQISTXXXXXXXXXXXXXXXXXXX 1754
Q + FF +IQDL + GK + LY+L++
Sbjct: 482 QQTSCSVHFFRDSFIIQDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSAT 541
Query: 1755 XXXXWHRRLGHAPLPVLKHLSFLKHLFANDASPSLDTCDVCHKSKQHRLPFPTSRIQTSK 1934
WH RLGH + + L + + S +C VC +KQ RL FP S +
Sbjct: 542 TFDLWHHRLGHPSDIRVHSIDKSSELKFSTSETSSISCPVCPLAKQRRLSFPVSSHVSKF 601
Query: 1935 CFDLVHIDVWGPYN*SSLTSTPFFLTLVDDFSRATWVFLMSHKSQVSRLLKQFLQMVQTQ 2114
F+L+H+DVWGP + S FFL++VDD+SR TWV+L+ KS V + +F+ V+ Q
Sbjct: 602 PFELLHVDVWGPCSEISTDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQ 661
Query: 2115 FQASVKIVRSDNGTEFTSKECQEVFVSAGIIHQRSCVFTPQQNGIVERKHRHLLNVARAL 2294
F AS+K VRSDN E K +F GI+HQ SC +TPQQN IVERKH+H+LNVARAL
Sbjct: 662 FNASIKCVRSDNAPELGFKS---LFAKKGILHQFSCPYTPQQNSIVERKHQHILNVARAL 718
Query: 2295 MFQSNLPSKFWPYSVLSAAYLINRIPSLLLNWRTPFELLHGTTPSYSHLKPFGCLSYATN 2474
+FQSN+P FW +L++ YLINR PS LL +TPFELL G +PSYSHL+ FGCL Y +
Sbjct: 719 LFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVST 778
Query: 2475 THPHKSKFSTRAYRCVFLGYITGQKGYRLYDLDNHCLFSSRDVIFFEDNFPFSNI----- 2639
+ KF+ RA VFLGY G KGY++ DL ++ + SR+V+F E FPF +
Sbjct: 779 LTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLISRNVVFHETTFPFKSFPQSQP 838
Query: 2640 -------------------EVPTDSVPLPLISSDMPDTP-QPTAPSHTPSA--VPDPSHP 2753
+ + S L +S + P P S T S+ V S
Sbjct: 839 ALDPFPQSVSPFFYESISPQNLSSSSALSPVSQEFPTDPISSLGSSETDSSGFVTSSSAH 898
Query: 2754 LRRSTRVSHPPTWLSNFITNSATTFTSLKFPSSLTDGPLFPISTFPFNYSSNLSDAHHVV 2933
+ R R S P +LS++ + S P+ +T PL T+ LS ++
Sbjct: 899 VTRPQRQSKTPAYLSDYHC-YLISHNSTPHPNPVTPYPLSACLTYDL-----LSPSYRTF 952
Query: 2934 LANVSLIQEPRTY 2972
N++ EP++Y
Sbjct: 953 ALNITTAPEPQSY 965
>ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X3 [Tarenaya hassleriana]
Length = 1238
Score = 493 bits (1268), Expect = e-152
Identities = 336/996 (33%), Positives = 494/996 (49%), Gaps = 70/996 (7%)
Frame = +3
Query: 195 DPLKLYSSDHPGLSLVTNQLTGN-NYLSWRRSMLIALGAKTKLGFITGRIEVPEAGSPKY 371
DPL L+++D + LV+ +L G NY W R++ AL AK KLGFI G I P
Sbjct: 36 DPLFLHAADSSSVFLVSEKLHGEANYGVWSRAVRKALLAKNKLGFILGTIPQPVDDEEDS 95
Query: 372 DQWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLEREIAS 551
W + + MV +W+ NS+ +++ Y A ++W + F N +Y ++ +I S
Sbjct: 96 GSWLRCNAMVCTWLSNSVDPDILTLISYMEDAHEIWMHLQNCFLQTNVSKLYSIQHQIDS 155
Query: 552 INQGSMSVVEYFTK*KRLWDELACLMPLPICDNE-------IRRLIDERDM---NRKLVQ 701
+ QGS+++ YFTK LW EL PLP+C + R+ D+ R +V+
Sbjct: 156 LYQGSLNLNSYFTKLNALWKELKHFEPLPVCSCKGCTCGGCKCRISDQWSALFERRSVVR 215
Query: 702 FLMGLHESYDQVRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAMSTRINN 881
FLM L++S+ R Q+L+ DPLP++ +AY++V + E+Q+ L + VA ST N+
Sbjct: 216 FLMRLNDSFSAARRQILMSDPLPDLTRAYNLVAQEEQQK---LNVSCLPDAVAFSTTTNS 272
Query: 882 FDRRNAGRGVMTGGRGPRTGDWNTG--RGRGVYRRTKEEKEKLVCKHCTMTGHEIS*CFK 1055
R P + + + Y T + + +C HC MTGH +S CF+
Sbjct: 273 -------------SRSPYSFPSSNPPPKSPSPYPSTSSNRPRPICTHCGMTGHVVSRCFR 319
Query: 1056 LHGYP-------NWFKK----------LREDRNAL----------AKYSITNDFGGCEPQ 1154
LHGYP NW + L + +N + A ++ G Q
Sbjct: 320 LHGYPPGHKSHPNWNSRSGPPRPKSQSLEKAQNQVNLVDVGSASNAALAVAQSVDGNTGQ 379
Query: 1155 KDTHQLDIATLIKQEISKALAGRVQQGQNSSEQSMNFT*YTDFAGTILPLLNHHALTTLE 1334
Q + +L+ Q +S+ +GQ S NF + + I L+ + LTT
Sbjct: 380 NTLAQ--VHSLLSQLLSQ------HKGQGSVSLDSNFAVPSPPSPGI-SLVTYPLLTTSP 430
Query: 1335 S---LDKDSWILDTGASKHMCASPSLMQNLVPISSLVSICLPDGTTKVVTHSGQVAISSG 1505
S WILDTGAS H+C + L + I +VS+ LP+G++ VT +G V +SS
Sbjct: 431 SNITFPTAVWILDTGASTHVCCNLGLFSEVHDIP-VVSVSLPNGSSLKVTQAGTVLLSSS 489
Query: 1506 LLLHDVLLVPSFKYNFLSIAQLTQ*SHLKCLFFPSHCLIQDLRTEEVKDMGKVVGCLYVL 1685
+ L VL +P+F YN LS++ LTQ + FF +IQDL + GK + LY+L
Sbjct: 490 ITLSSVLFIPTFHYNLLSVSCLTQQTSCSVHFFRDSFIIQDLTRGLMIGKGKQLHNLYIL 549
Query: 1686 QISTXXXXXXXXXXXXXXXXXXXXXXXWHRRLGHAPLPVLKHLSFLKHLFANDASPSLDT 1865
++ WH RLGH + + L + + S +
Sbjct: 550 EMLHTSSTTISLPSKFCTTLSATTFDLWHHRLGHPSDIRVHSIDKSSELKFSTSETSSIS 609
Query: 1866 CDVCHKSKQHRLPFPTSRIQTSKCFDLVHIDVWGPYN*SSLTSTPFFLTLVDDFSRATWV 2045
C VC +KQ RL FP S + F+L+H+DVWGP + S FFL++VDD+SR TWV
Sbjct: 610 CPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEISTDGHRFFLSIVDDYSRCTWV 669
Query: 2046 FLMSHKSQVSRLLKQFLQMVQTQFQASVKIVRSDNGTEFTSKECQEVFVSAGIIHQRSCV 2225
+L+ KS V + +F+ V+ QF AS+K VRSDN E K +F GI+HQ SC
Sbjct: 670 YLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPELGFKS---LFAKKGILHQFSCP 726
Query: 2226 FTPQQNGIVERKHRHLLNVARALMFQSNLPSKFWPYSVLSAAYLINRIPSLLLNWRTPFE 2405
+TPQQN IVERKH+H+LNVARAL+FQSN+P FW +L++ YLINR PS LL +TPFE
Sbjct: 727 YTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFE 786
Query: 2406 LLHGTTPSYSHLKPFGCLSYATNTHPHKSKFSTRAYRCVFLGYITGQKGYRLYDLDNHCL 2585
LL G +PSYSHL+ FGCL Y + + KF+ RA VFLGY G KGY++ DL ++ +
Sbjct: 787 LLTGCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAV 846
Query: 2586 FSSRDVIFFEDNFPFSNI------------------------EVPTDSVPLPLISSDMPD 2693
SR+V+F E FPF + + + S L +S + P
Sbjct: 847 LISRNVVFHETTFPFKSFPQSQPALDPFPQSVSPFFYESISPQNLSSSSALSPVSQEFPT 906
Query: 2694 TP-QPTAPSHTPSA--VPDPSHPLRRSTRVSHPPTWLSNFITNSATTFTSLKFPSSLTDG 2864
P S T S+ V S + R R S P +LS++ + S P+ +T
Sbjct: 907 DPISSLGSSETDSSGFVTSSSAHVTRPQRQSKTPAYLSDYHC-YLISHNSTPHPNPVTPY 965
Query: 2865 PLFPISTFPFNYSSNLSDAHHVVLANVSLIQEPRTY 2972
PL T+ LS ++ N++ EP++Y
Sbjct: 966 PLSACLTYDL-----LSPSYRTFALNITTAPEPQSY 996
>ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X1 [Tarenaya hassleriana]
Length = 1275
Score = 493 bits (1268), Expect = e-152
Identities = 336/996 (33%), Positives = 494/996 (49%), Gaps = 70/996 (7%)
Frame = +3
Query: 195 DPLKLYSSDHPGLSLVTNQLTGN-NYLSWRRSMLIALGAKTKLGFITGRIEVPEAGSPKY 371
DPL L+++D + LV+ +L G NY W R++ AL AK KLGFI G I P
Sbjct: 36 DPLFLHAADSSSVFLVSEKLHGEANYGVWSRAVRKALLAKNKLGFILGTIPQPVDDEEDS 95
Query: 372 DQWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLEREIAS 551
W + + MV +W+ NS+ +++ Y A ++W + F N +Y ++ +I S
Sbjct: 96 GSWLRCNAMVCTWLSNSVDPDILTLISYMEDAHEIWMHLQNCFLQTNVSKLYSIQHQIDS 155
Query: 552 INQGSMSVVEYFTK*KRLWDELACLMPLPICDNE-------IRRLIDERDM---NRKLVQ 701
+ QGS+++ YFTK LW EL PLP+C + R+ D+ R +V+
Sbjct: 156 LYQGSLNLNSYFTKLNALWKELKHFEPLPVCSCKGCTCGGCKCRISDQWSALFERRSVVR 215
Query: 702 FLMGLHESYDQVRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAMSTRINN 881
FLM L++S+ R Q+L+ DPLP++ +AY++V + E+Q+ L + VA ST N+
Sbjct: 216 FLMRLNDSFSAARRQILMSDPLPDLTRAYNLVAQEEQQK---LNVSCLPDAVAFSTTTNS 272
Query: 882 FDRRNAGRGVMTGGRGPRTGDWNTG--RGRGVYRRTKEEKEKLVCKHCTMTGHEIS*CFK 1055
R P + + + Y T + + +C HC MTGH +S CF+
Sbjct: 273 -------------SRSPYSFPSSNPPPKSPSPYPSTSSNRPRPICTHCGMTGHVVSRCFR 319
Query: 1056 LHGYP-------NWFKK----------LREDRNAL----------AKYSITNDFGGCEPQ 1154
LHGYP NW + L + +N + A ++ G Q
Sbjct: 320 LHGYPPGHKSHPNWNSRSGPPRPKSQSLEKAQNQVNLVDVGSASNAALAVAQSVDGNTGQ 379
Query: 1155 KDTHQLDIATLIKQEISKALAGRVQQGQNSSEQSMNFT*YTDFAGTILPLLNHHALTTLE 1334
Q + +L+ Q +S+ +GQ S NF + + I L+ + LTT
Sbjct: 380 NTLAQ--VHSLLSQLLSQ------HKGQGSVSLDSNFAVPSPPSPGI-SLVTYPLLTTSP 430
Query: 1335 S---LDKDSWILDTGASKHMCASPSLMQNLVPISSLVSICLPDGTTKVVTHSGQVAISSG 1505
S WILDTGAS H+C + L + I +VS+ LP+G++ VT +G V +SS
Sbjct: 431 SNITFPTAVWILDTGASTHVCCNLGLFSEVHDIP-VVSVSLPNGSSLKVTQAGTVLLSSS 489
Query: 1506 LLLHDVLLVPSFKYNFLSIAQLTQ*SHLKCLFFPSHCLIQDLRTEEVKDMGKVVGCLYVL 1685
+ L VL +P+F YN LS++ LTQ + FF +IQDL + GK + LY+L
Sbjct: 490 ITLSSVLFIPTFHYNLLSVSCLTQQTSCSVHFFRDSFIIQDLTRGLMIGKGKQLHNLYIL 549
Query: 1686 QISTXXXXXXXXXXXXXXXXXXXXXXXWHRRLGHAPLPVLKHLSFLKHLFANDASPSLDT 1865
++ WH RLGH + + L + + S +
Sbjct: 550 EMLHTSSTTISLPSKFCTTLSATTFDLWHHRLGHPSDIRVHSIDKSSELKFSTSETSSIS 609
Query: 1866 CDVCHKSKQHRLPFPTSRIQTSKCFDLVHIDVWGPYN*SSLTSTPFFLTLVDDFSRATWV 2045
C VC +KQ RL FP S + F+L+H+DVWGP + S FFL++VDD+SR TWV
Sbjct: 610 CPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEISTDGHRFFLSIVDDYSRCTWV 669
Query: 2046 FLMSHKSQVSRLLKQFLQMVQTQFQASVKIVRSDNGTEFTSKECQEVFVSAGIIHQRSCV 2225
+L+ KS V + +F+ V+ QF AS+K VRSDN E K +F GI+HQ SC
Sbjct: 670 YLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPELGFKS---LFAKKGILHQFSCP 726
Query: 2226 FTPQQNGIVERKHRHLLNVARALMFQSNLPSKFWPYSVLSAAYLINRIPSLLLNWRTPFE 2405
+TPQQN IVERKH+H+LNVARAL+FQSN+P FW +L++ YLINR PS LL +TPFE
Sbjct: 727 YTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFE 786
Query: 2406 LLHGTTPSYSHLKPFGCLSYATNTHPHKSKFSTRAYRCVFLGYITGQKGYRLYDLDNHCL 2585
LL G +PSYSHL+ FGCL Y + + KF+ RA VFLGY G KGY++ DL ++ +
Sbjct: 787 LLTGCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAV 846
Query: 2586 FSSRDVIFFEDNFPFSNI------------------------EVPTDSVPLPLISSDMPD 2693
SR+V+F E FPF + + + S L +S + P
Sbjct: 847 LISRNVVFHETTFPFKSFPQSQPALDPFPQSVSPFFYESISPQNLSSSSALSPVSQEFPT 906
Query: 2694 TP-QPTAPSHTPSA--VPDPSHPLRRSTRVSHPPTWLSNFITNSATTFTSLKFPSSLTDG 2864
P S T S+ V S + R R S P +LS++ + S P+ +T
Sbjct: 907 DPISSLGSSETDSSGFVTSSSAHVTRPQRQSKTPAYLSDYHC-YLISHNSTPHPNPVTPY 965
Query: 2865 PLFPISTFPFNYSSNLSDAHHVVLANVSLIQEPRTY 2972
PL T+ LS ++ N++ EP++Y
Sbjct: 966 PLSACLTYDL-----LSPSYRTFALNITTAPEPQSY 996
>gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1423
Score = 494 bits (1272), Expect = e-151
Identities = 324/969 (33%), Positives = 497/969 (51%), Gaps = 43/969 (4%)
Frame = +3
Query: 195 DPLKLY---SSDHPGLSLVTNQLTGNNYLSWRRSMLIALGAKTKLGFITGRIEVPEAGSP 365
DPL Y S+++P +SLV+ L +NYLSW +SML+ LG K KL FI G + P
Sbjct: 10 DPLSPYFLPSNENPSISLVSAPLNDHNYLSWSQSMLLVLGTKNKLAFIDGSLARPVTAGV 69
Query: 366 KYDQWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLEREI 545
W + + +VISWI+ S+ +L+ + I+ +A +W+D+ KR+ + I +L EI
Sbjct: 70 DQTAWDRCNKLVISWIVQSLDTSLIPSVIWMPTASQIWNDLKKRYYQGDAFRISELLEEI 129
Query: 546 ASINQGSMSVVEYFTK*KRLWDELACLMPLPICDNEIRRLIDERDMNRKLVQFLMGLHES 725
S+ QG+MS+ YFT + LW EL P+P C + ++FL GL+E
Sbjct: 130 YSLKQGNMSITHYFTTLQGLWQELDHFCPIPSCTCFTTECV---------IRFLKGLNEQ 180
Query: 726 YDQVRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAMSTRINNFDRRNAGR 905
Y VRSQ++LMDPLP+V K +S++L+ E++ + N++ ++ NN
Sbjct: 181 YSNVRSQVMLMDPLPSVQKVFSMILQQERE------FHGTNDNQVLAVTSNN-------- 226
Query: 906 GVMTGGRGPRTGDWNTGRGRGVYRRTKEEKEKLVCKHCTMTGHEIS*CFKLHGYPNWFKK 1085
+ N +G ++R K+ K VC HC GH + C+K HG P K
Sbjct: 227 ------------ERNNYKGSKTFKRNKDYNTK-VCSHCGRIGHLVDSCYKKHGPPLQHKH 273
Query: 1086 LREDRNALAKYSITNDFGGCEPQKDTHQLDIA----TLIKQEISKALAGRVQQGQNSSEQ 1253
R + +Y +D + Q Q ++ + E +AL +QQ ++S
Sbjct: 274 GR----IVNQYQSVSDEDTDDDQSVHSQRVVSHNSGNMFTPEQHQALLALLQQSGSTSSH 329
Query: 1254 SMNFT*YTDFAGTIL---PLLNHHALTTLESLDKDSWILDTGASKHMCASPSLMQNLVPI 1424
S+N AG + P L+ S + D WI+DTGA+ H+C + + Q+ I
Sbjct: 330 SVN-----QLAGPSILSSPKPPGMILSFPYSHNSDCWIIDTGATDHVCKNINFFQSYRRI 384
Query: 1425 SSLVSICLPDGTTKVVTHSGQVAISSGLLLHDVLLVPSFKYNFLSIAQLTQ*SHLKCLFF 1604
++ I LP+G+ SG V +S L DVL +P+F +N +S+++L + F
Sbjct: 385 KPIL-IQLPNGSQVSTCVSGTVLLSKTCYLTDVLFIPNFHFNLISVSKLAKTLSCTLTFS 443
Query: 1605 PSHCLIQDLRTEEVKDMGKVVGCLYVLQISTXXXXXXXXXXXXXXXXXXXXXXXWHRRLG 1784
S C IQ + + ++ LY + S WH RLG
Sbjct: 444 DSDCQIQANHSMRMIGAAELRAGLYAMVSSPESNVVHHCTSHFFTYQSDL----WHLRLG 499
Query: 1785 HAPLPVLKH--LSFLKHLFANDASPSLDT-CDVCHKSKQHRLPFPTSRIQTSKCFDLVHI 1955
H L H LS LK + + C++CH +K RLPFP S ++ FDL+H+
Sbjct: 500 H-----LSHDKLSALKGSYPEIQCNKISLPCEICHLAKHKRLPFPDSLTKSENVFDLIHV 554
Query: 1956 DVWGPYN*SSLTSTPFFLTLVDDFSRATWVFLMSHKSQVSRLLKQFLQMVQTQFQASVKI 2135
D+WGP + +S+ +FLT+VDD SR TW+F M +K + LL+ F+ VQTQFQ ++K
Sbjct: 555 DIWGPLSVASIFGHKYFLTIVDDKSRFTWIFFMKNKFETKLLLQNFVSFVQTQFQQNIKT 614
Query: 2136 VRSDNGTEFTSKECQEVFVSAGIIHQRSCVFTPQQNGIVERKHRHLLNVARALMFQSNLP 2315
+R+DNG+EF K+ + GI+HQ SCV TPQQNG+VERKH+H+L++ARALMFQSN+
Sbjct: 615 IRTDNGSEFLLKDW---YAKLGIVHQTSCVNTPQQNGVVERKHQHILSMARALMFQSNVS 671
Query: 2316 SKFWPYSVLSAAYLINRIPSLLLNWRTPFELLHGTTPSYSHLKPFGCLSYATNTHPHKSK 2495
FW Y++ A +LINR+P+ L +P+ +L+ P +SHLK FGCL++A+ +++K
Sbjct: 672 KMFWNYAIGHAVHLINRLPTRFLQQNSPYYVLYSEKPDFSHLKVFGCLAFASTLSHNRTK 731
Query: 2496 FSTRAYRCVFLGYITGQKGYRLYDLDNHCLFSSRDVIFFEDNFPFS---NIEVPTDSVPL 2666
R+ +C+FLGY +G KG+ +YDL F SRDV F+E+ FP +I+ TD +
Sbjct: 732 LEPRSRKCMFLGYSSGTKGFIMYDLKTRETFISRDVQFYENIFPLQKDFSIQ-STDGPVV 790
Query: 2667 PLISSDMPDTPQPTAPSHTPSAVPDPSH-------PL-------------------RRST 2768
P+ + MP T PSHT + + H P+ R S
Sbjct: 791 PI--AQMPLTSCDPIPSHTHDNLDETEHEHNSSTLPMTNSSNSDQPNIEINIPEIRRTSQ 848
Query: 2769 RVSHPPTWLSNFITNSATTFTSLKFPSSLTDGPLFPISTF-PFNYSSNLSDAHHVVLANV 2945
RV + P +L ++ T S SS T +PIS + P+ ++ S ++ +
Sbjct: 849 RVKNRPGYLQDY---HCTLAASKVDQSSST--ARYPISDYLPY---TSYSAVQQSFVSTI 900
Query: 2946 SLIQEPRTY 2972
S I EPR+Y
Sbjct: 901 SSIIEPRSY 909
>gb|KYP40999.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1029
Score = 481 bits (1238), Expect = e-150
Identities = 308/945 (32%), Positives = 477/945 (50%), Gaps = 23/945 (2%)
Frame = +3
Query: 207 LYSSDHPGLSLVTNQLTGNNYLSWRRSMLIALGAKTKLGFITGRIEVPEAGSPKYDQWRK 386
++ +++P L LV+ L G NY SW RSM +AL K K FI G ++ P + P + W++
Sbjct: 12 IHPNENPSLILVSPVLDGPNYHSWSRSMAMALEMKNKSSFIDGTLKKPVSDDPDFSMWKR 71
Query: 387 VDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLEREIASINQGS 566
+ +V+SW+++S+S + + IY ++A D W ++ +RF + I QL +I S+ QG
Sbjct: 72 CNTLVLSWLIHSVSPEIAHSIIYIDTAFDAWKELKQRFSQGDHVRISQLLTDIHSLKQGD 131
Query: 567 MSVVEYFTK*KRLWDELACLMPLPICDNE---IRRLIDERDMNRKLVQFLMGLHESYDQV 737
SV YFTK K LW+E PL CD++ + + E N ++ FL GL+++Y V
Sbjct: 132 SSVTTYFTKYKILWEEYCNFRPLTPCDSDSCKTHKAVKEYRDNDSVLCFLQGLNDNYSTV 191
Query: 738 RSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAMSTRINNFDRRNAGRGVMT 917
RSQ+LL+DPLP++ K +S+V++ E+Q N+ + E + ++T+ F + G+
Sbjct: 192 RSQILLLDPLPSITKVFSMVVQQERQLNIGIL----PEPLVLATQ-TQFPSNSQGKVRFN 246
Query: 918 GGRGPRTGDWNTGRGRGVYRRTKEEKEKLVCKHCTMTGHEIS*CFKLHGYPNWFKKLRED 1097
G K++ K C +C H I CF HG+P ++ +
Sbjct: 247 G---------------------KKQSNKH-CTYCKKNNHTIETCFFKHGFPPGYRTTKSS 284
Query: 1098 RNALAKYSITNDFGGCEPQKDTHQLDIATLIKQEISKALAGRVQQGQNSSEQSMNFT*YT 1277
N +A SI P T Q+ + + V +S S +
Sbjct: 285 SNVVASSSIDP----AAPSLSTEQIQALLALLPSTAPTATTSVSNLVSSHGVSAS----- 335
Query: 1278 DFAGTILPLLNHHALTTLESLDKDSWILDTGASKHMCASPSLMQNLVPISSLVSICLPDG 1457
+L TL S WILD+GA+ H+ +S S I + + LP+G
Sbjct: 336 -----------PQSLGTLPS----PWILDSGATDHIISSLSSFSCYKSIQP-IHVSLPNG 379
Query: 1458 TTKVVTHSGQVAISSGLLLHDVLLVPSFKYNFLSIAQLTQ*SHLKCLFFPSHCLIQDLRT 1637
+ SG V +S + L++VL +P+F N +S+ +LT F +C+IQ+ +T
Sbjct: 380 QHSIAEFSGTVVLSPNISLYNVLYIPNFSVNLISVNKLTSSLSCTLCFSSDNCVIQEHKT 439
Query: 1638 EEVKDMGKVVGCLYVLQISTXXXXXXXXXXXXXXXXXXXXXXX---WHRRLGHAPLPVLK 1808
+ K LYV+ T WH RLGH
Sbjct: 440 LRKIGIAKAQNGLYVMDFLTHKDSSSLATFNTASVTFTSKIDPSSLWHFRLGHPSGQCYS 499
Query: 1809 HLSFLKHLFANDASPSLDTCDVCHKSKQHRLPFPTSRIQTSKCFDLVHIDVWGPYN*SSL 1988
H+ ++ F S S +TCD CH SKQ +LPF S ++ DL+H+D+WGPY S+
Sbjct: 500 HIQ-KQYPFV---SSSFNTCDFCHFSKQKKLPFNNSTTISANVLDLIHVDIWGPYATPSV 555
Query: 1989 TSTPFFLTLVDDFSRATWVFLMSHKSQVSRLLKQFLQMVQTQFQASVKIVRSDNGTEFTS 2168
+FLT+VDD SR TW+ LM +K++ + L F+ +TQF ++KI+RSDNG EF
Sbjct: 556 LGHKYFLTIVDDKSRFTWIRLMQNKNETRQHLLNFITFTETQFHKTIKIIRSDNGQEFNM 615
Query: 2169 KECQEVFVSAGIIHQRSCVFTPQQNGIVERKHRHLLNVARALMFQSNLPSKFWPYSVLSA 2348
+ ++ S GIIHQ SCV TPQQNG+VERKH+H+LN+AR+L+ QS+LP +W ++V A
Sbjct: 616 PQ---LYASKGIIHQLSCVETPQQNGVVERKHQHILNIARSLLLQSHLPLSYWCFAVKHA 672
Query: 2349 AYLINRIPSLLLNWRTPFELLHGTTPSYSHLKPFGCLSYATNTHPHKSKFSTRAYRCVFL 2528
+IN +PS L+ +P + + P SHL+ FG L +A+ H++KF+ RA RC+ L
Sbjct: 673 VMIINILPSYKLHNLSPSNIFYNKEPDISHLRVFGSLCFASTLTAHRTKFAPRAKRCLLL 732
Query: 2529 GYITGQKGYRLYDLDNHCLFSSRDVIFFEDNFPFSNIEVPTDSVPLPLISSDMPDTP--- 2699
G+ G KGY L DL+ +F SR+V+F+E FP+S +P S L S +P T
Sbjct: 733 GHKDGVKGYLLMDLNTKEIFISRNVVFYETIFPYSPSCIPPAS-NNDLCSPCLPCTTNHA 791
Query: 2700 --QPTAPSHTPSA---VPDPSH---------PLRRSTRVSHPPTWLSNFITNSATTFTSL 2837
P A S P+ +P PS+ P R STR HPP +L ++ N L
Sbjct: 792 DLNPEASSQHPAQQQHIPVPSNTAENPQTNLPFRVSTRQRHPPNYLRDYHCNIVNHHAPL 851
Query: 2838 KFPSSLTDGPLFPISTFPFNYSSNLSDAHHVVLANVSLIQEPRTY 2972
+S+ P S F + LS ++ + +++ EP++Y
Sbjct: 852 THSTSV------PHSLSAFLSYNRLSPSYKSFVLSLTSSAEPQSY 890
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 487 bits (1254), Expect = e-148
Identities = 322/958 (33%), Positives = 476/958 (49%), Gaps = 32/958 (3%)
Frame = +3
Query: 195 DPLKLYSSDHPGLSLVTNQLTGNNYLSWRRSMLIALGAKTKLGFITGRIEVPEAGSPKYD 374
DP L+ SDHPG+ LV+ + G+NY +W R+M I+L AK K+GF+TG I+ P + +
Sbjct: 76 DPFSLHHSDHPGMVLVSKVIEGDNYSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDDSFP 135
Query: 375 QWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLEREIASI 554
W++ + M + S + E F N IYQ++R+I
Sbjct: 136 SWQRCNDM------HQKSGQICENV----------------FRQGNDSRIYQIKRDIVEH 173
Query: 555 NQGSMSVVEYFTK*KRLWDELACLMPLPICDNEIRRLIDERDMNRKLVQFLMGLHESYDQ 734
QG S+ Y+TK K WDEL+ + C + ERD +++QFLMGL++SY
Sbjct: 174 RQGQQSISVYYTKLKAFWDELSSYHEVLSCSCGGLEKLKERDEKERVMQFLMGLNDSYAA 233
Query: 735 VRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAMSTRINNFDRRNAGRGVM 914
+R Q+LLM PLP+ + YS+VL+ EKQ V L + N + ++ R N +
Sbjct: 234 IRGQILLMHPLPDTRRVYSLVLQQEKQVEVSLNNGNKNHYAMLADRDNKATSAH------ 287
Query: 915 TGGRGPRTGDWNTGRGRGVYRRTKEEKEKLVCKHCTMTGHEIS*CFKLHGYPNWFK---- 1082
+ +++K L C +C H I C+ LHG+P K
Sbjct: 288 ---------------------QVQKQKTPLHCSYCDRDYHSIEKCYYLHGFPIGHKLHGK 326
Query: 1083 --KLREDRNALAKYSITNDFGGCEPQ-KDTHQLDIATLIKQEISKALAGRVQQGQNSSEQ 1253
K R++ A E + K D L +E ++ +A + +S+
Sbjct: 327 NVKPPNQRHSNANNVKVETNKAVETEAKLLPTNDGPRLTTEEYNQLMAMIRKNNGGNSQH 386
Query: 1254 SMNFT*YTDFAGTILPLLNHHALTTLESLDKDSWILDTGASKHMCASPSLMQNLVPISSL 1433
N T + I+P H + WI+D+GA+ H+ +S L+ +
Sbjct: 387 FANATGINMSSSKIIPNCPHSNMC---------WIIDSGATDHVTSSAELLDPK-NLPKT 436
Query: 1434 VSICLPDGTTKVVTHSGQVAISSGLLLHDVLLVPSFKYNFLSIAQLTQ*SHLKCLFFPSH 1613
+I LP+G + G + ++ + L DVL VP F+ N LS+++LT+ +FF
Sbjct: 437 TTISLPNGGQAHIESIGSLHVTPHIKLDDVLKVPQFQVNLLSVSKLTRALQCIVMFFFDF 496
Query: 1614 CLIQDLRTEEVKDMGKVVGCLYVLQISTXXXXXXXXXXXXXXXXXXXXXXXWHRRLGHAP 1793
C++QD T + +GK LY L WH+RLGH
Sbjct: 497 CVVQDATTRKTIGLGKQHNGLYYLA---------QDQNPALAYAIHKHSDLWHQRLGHPS 547
Query: 1794 LPVLKHLSFLKHLFANDASPSLDTCDVCHKSKQHRLPFPTSRIQTSKCFDLVHIDVWGPY 1973
L+ L+ + D S CD+C +KQ RL FP+S I + FDL+H D+WGP+
Sbjct: 548 SGPLQVLAKVNPKIYFD---SKHVCDICPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPH 604
Query: 1974 N*SSLTSTPFFLTLVDDFSRATWVFLMSHKSQVSRLLKQFLQMVQTQFQASVKIVRSDNG 2153
+S + +FLT+VDD +R TW+ LMS KS+ +L+ F+ V+TQF +K +R+DNG
Sbjct: 605 RINSHSGAXYFLTIVDDHTRYTWIHLMSFKSETQGILQSFISWVETQFNRCIKTLRTDNG 664
Query: 2154 TEFTSKECQEVFVSAGIIHQRSCVFTPQQNGIVERKHRHLLNVARALMFQSNLPSKFWPY 2333
TE +S + + + GI + SC +TPQQNG+VERKHRHLLNV RAL FQ+NLP KFW
Sbjct: 665 TEISSMK--QYLDTKGINYHHSCAYTPQQNGVVERKHRHLLNVGRALRFQANLPLKFWGE 722
Query: 2334 SVLSAAYLINRIPSLLLNWRTPFELLHGTTPSYSHLKPFGCLSYATNTHPHKSKFSTRAY 2513
S+ +A YLINR+P+ LL+ ++P++LL PSY HL+ FGCL YATN P KF RA
Sbjct: 723 SIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLRTFGCLCYATNLLP-THKFDQRAR 781
Query: 2514 RCVFLGYITGQKGYRLYDLDNHCLFSSRDVIFFEDNFPF--SNIEVPTDSVPLPLISSD- 2684
RC+F+GY GQKGYR+YDL + FSS DV+F E FPF + E D V LPL +
Sbjct: 782 RCIFVGYPLGQKGYRVYDLXTNKFFSSXDVVFHEHIFPFHTNPQEEQHDVVVLPLPQTSY 841
Query: 2685 ---MPDTPQPTAPSHTP------------------SAVPDPSHPLRRSTRVSHPPTWLSN 2801
+T +P A P + V P RRS R+ P L N
Sbjct: 842 EPITTETTKPQADDQPPPLLSSLESTSNERTLXLDTIVSPPPPTTRRSDRIKQPNVHLRN 901
Query: 2802 F-ITNSATTFTSLKFPSSLTDGPLFPISTFPFNYSSNLSDAHHVVLANVSLIQEPRTY 2972
F + ++A +S SS G P++ + +Y + LS + + ++ + EP TY
Sbjct: 902 FHLYHTAKVASS---QSSSLSGTRHPLTRY-ISY-AQLSPKYRNFVCAITTLVEPTTY 954
>ref|XP_004240625.1| PREDICTED: uncharacterized protein LOC101261123 [Solanum
lycopersicum]
Length = 943
Score = 471 bits (1213), Expect = e-147
Identities = 316/951 (33%), Positives = 474/951 (49%), Gaps = 58/951 (6%)
Frame = +3
Query: 198 PLKLYSSDHPGLSLVTNQLTGN-NYLSWRRSMLIALGAKTKLGFITGRIEVPEAGSPKYD 374
PL LY SD PG V L+G+ NY W ++M +AL K K+GFI G ++ +
Sbjct: 24 PLYLYPSDSPGSLNVGILLSGSDNYTLWSKAMELALLGKNKVGFIDGTVKKTQFTGDLTQ 83
Query: 375 QWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLEREIASI 554
W + + +V+SWIL CN L +EI ++
Sbjct: 84 LWDRCNAIVVSWIL------------------------------CN------LHKEIFTL 107
Query: 555 NQGSMSVVEYFTK*KRLWDELACLMPLPICDNEIRRLIDERDMNRKLVQFLMGLHESYDQ 734
QG SV Y+++ K LWDE +MP P C + E+ +++++QFLMGL+++Y Q
Sbjct: 108 VQGVSSVSLYYSRLKDLWDEYDSIMPPPACTCSRSKEFFEQLQHQRMLQFLMGLNDNYSQ 167
Query: 735 VRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAMSTRINNFDRRNAGRGVM 914
RSQ+LLM LP++++AY++V + E QR V + V N+G
Sbjct: 168 ARSQILLMPQLPSINQAYAMVNQDESQRMVA-----GSSRVMTDMVPTAMFTSNSG---- 218
Query: 915 TGGRGPRTG-------DWNTGRGRGVYRRTKEEKEKLV-CKHCTMTGHEIS*CFKLHGYP 1070
GG PR D+ +G + + KL+ C C TGH S C+KL GYP
Sbjct: 219 PGGHKPRRSYNPNALCDYCNIKGH-----MRSDCNKLLKCDFCHKTGHLKSNCYKLIGYP 273
Query: 1071 NWFKKLRED---RNALAKYSITNDFGGCEPQKDTHQLDIATLIKQEISKALAGRVQ---- 1229
+K R+ RN++ + C+ + +T Q + + Q + + + ++Q
Sbjct: 274 AEYKGKRDTIVARNSIYNAGHVSQQYQCD-KTETVQSSYNSQMPQMMQSSFSNKMQLQPP 332
Query: 1230 --QGQNSSEQSMNFT*YTDFAGTILPLLNHHAL-----TTLESLDKDS----------WI 1358
+++E M + Y PL + L T LE + S WI
Sbjct: 333 SVSSSHNNESQMPSSHYNSQMPLFTPLQHQKLLKMLNQTKLEDISGTSNMTGNHTSLKWI 392
Query: 1359 LDTGASKHMCASPSLMQNLVPISSLVSICLPDGTTKVVTHSGQVAISSGLLLHDVLLVPS 1538
+DTGAS H+ + + + N V + + + LP GT+ V+H G I G +L VL VP+
Sbjct: 393 IDTGASHHIVRNHTCLCNSVMVENAGQVQLPTGTSAKVSHVGDCHIGGGDVLRRVLCVPA 452
Query: 1539 FKYNFLSIAQLTQ*SHLKCLFFPSHCLIQDLRTEEVKDMGKVVGCLYVLQISTXXXXXXX 1718
FK+N LS++Q+T+ + F+PS C++QDL + +V+ +GK LY
Sbjct: 453 FKFNLLSVSQMTKDLNCCVTFYPSCCVLQDLGSGKVRMIGKEEDGLYTFYSQPGQYDHNK 512
Query: 1719 XXXXXXXXXXXXXXXX----WHRRLGHAPLPVLKHLSFLKHLFANDASPSLDTCDVCHKS 1886
WH+RLGH P+ V++ +S H F N + L CD+C +
Sbjct: 513 MLQPHHCMTTIQSVEANANIWHQRLGHVPMGVIRKISSF-HKFGNKFA--LHKCDICPLA 569
Query: 1887 KQHRLPFPTSRIQTSKCFDLVHIDVWGPYN*SSLTSTPFFLTLVDDFSRATWVFLMSHKS 2066
+Q RLPFP S ++ F L+H+DVWGPY + +F T+VDD+SR TW FLM KS
Sbjct: 570 RQTRLPFPHSTSSSTCVFQLLHMDVWGPYRVETYDGMRYFFTIVDDYSRWTWTFLMRLKS 629
Query: 2067 QVSRLLKQFLQMVQTQFQASVKIVRSDNGTEFTSKECQEVFVSAGIIHQRSCVFTPQQNG 2246
V LLKQF+ ++TQF +K +R DNGTEF + C ++F GIIH+ SC +TPQQNG
Sbjct: 630 DVVSLLKQFVAEIETQFDKRIKRIRYDNGTEFFNTNCDDLFKLHGIIHESSCPYTPQQNG 689
Query: 2247 IVERKHRHLLNVARALMFQSNLPSKFWPYSVLSAAYLINRIPSLLLNWRTPFELLHGTTP 2426
++ER+HRH+L ARA+ FQ+ P KFW + +A +++N+IPS L + FE L+G P
Sbjct: 690 VMERRHRHILETARAIKFQAGFPDKFWGLCIHAATHVLNKIPSTTLGNVSSFERLYGRPP 749
Query: 2427 SYSHLKPFGCLSYATNTHPHKSKFSTRAYRCVFLGYITGQKGYRLYDLDNHCLFSSRDVI 2606
+++ GC+ +ATN H KFS RA R V +GY T QKGY+LYDL+N F SRDV
Sbjct: 750 LLDYMRVIGCMCFATNITTH-DKFSPRAIRAVLMGYGTTQKGYKLYDLENKRFFISRDVT 808
Query: 2607 FFEDNFPF-------SNIEVPTDSVPLPLISSD------MPDTPQPTAPSHTPSAVPDPS 2747
F E FPF + + P D ++ +D D+ P++ + V D S
Sbjct: 809 FLETVFPFHDHTPKQNQLVQPGDMFDYDVLVADSTSSTVCQDSGSPSS-QNCEDCVNDLS 867
Query: 2748 H--------PLRRSTRVSHPPTWLSNFITNSATTFTSLKFPSSLTDGPLFP 2876
PLR+S+R S PP W +++ + + + S L L P
Sbjct: 868 QVSCDITPPPLRKSSRNSRPPIWHKDYVVTAGSKKCNYSLASVLDYEGLSP 918
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 482 bits (1241), Expect = e-146
Identities = 323/974 (33%), Positives = 487/974 (50%), Gaps = 42/974 (4%)
Frame = +3
Query: 177 EANYDDDPLKLYSSDHPGLSLVTNQLTGNNYLSWRRSMLIALGAKTKLGFITGRIEVPEA 356
+A+Y P L + D PG +LV+ L G N+ SW+ +M ++L AK K+ F+ G + P
Sbjct: 58 DAHYS--PFALSNGDSPGNTLVSEVLDGTNFSSWKIAMFVSLYAKNKIAFVDGTLPRPPE 115
Query: 357 GSPKYDQWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLE 536
P + W + + MV SWILNS++ + ++ + N A ++W D+ RF N P YQL
Sbjct: 116 SDPSFRVWSRCNSMVKSWILNSVTKQIYKSILRFNDAAEIWKDLDTRFHITNLPRSYQLT 175
Query: 537 REIASINQGSMSVVEYFTK*KRLWDELACLMPLPICDNEIRRLIDERDM--NRKLVQFLM 710
++I S+ QG+MS+ +Y+T K LWD+L + C N I M + K+V+FL
Sbjct: 176 QQIWSLQQGTMSLSDYYTALKTLWDDLDGASCVSTCKN-CTCCIATASMIEHSKIVKFLS 234
Query: 711 GLHESYDQVRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAMSTRINNFDR 890
GL+ESY +RSQ+++ +P++ + Y+++ + QRN+ V M T + F+
Sbjct: 235 GLNESYSTIRSQIIMKKTIPDLAEIYNLLDQDHSQRNI----------VTMPTNASTFNV 284
Query: 891 RNAGRGVMTGGRGPRTGDW--NTGRGRGVYRRTKEEKEKLVCKHCTMTGHEIS*CFKLHG 1064
P++ + N + G + K K+ C HC TGH C+K+HG
Sbjct: 285 S-----------APQSDQFAVNLAKSFGT-----QPKPKVQCSHCGYTGHNADTCYKIHG 328
Query: 1065 YPNWFKKLREDRNALA-----------------KYSITNDFGGCEPQKDTHQLDIATLIK 1193
YP FK +D+ + K S+T G D + ++ K
Sbjct: 329 YPVGFK--HKDKKTVTPSEKPKSVVANLALTDGKVSVTQGIG-----PDGIVELVGSMSK 381
Query: 1194 QEISKALAGRVQQGQN-------SSEQSMNFT*YTDFAGTILPLLNHHALTTLESLDK-- 1346
+I +A Q N +S S N + F G L +L S K
Sbjct: 382 SQIQDVIAYFSTQLHNPAKPITVASFASTNNDNGSTFTGISFSPSTLRLLCSLTSSKKVL 441
Query: 1347 --DSWILDTGASKHMCASPSLMQNLVPISSLVSICLPDGTTKVVTHSGQVAISSGLLLHD 1520
++WI+D+GA+ H+ +L ++L S + LP G+ + G + ++S L L +
Sbjct: 442 SLNTWIIDSGATHHVSYDRNLFESLSDGLSN-EVTLPTGSNVKIAGIGVIKLNSNLTLKN 500
Query: 1521 VLLVPSFKYNFLSIAQLTQ*SHLKCLFFPSHCLIQDLRTEEVKDMGKVVGCLYVLQISTX 1700
VL +P F+ N LS++Q T+ K F C+IQD E+ G +G LYVL S+
Sbjct: 501 VLYIPEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPIKEQKIGRGNQIGGLYVLDTSSV 560
Query: 1701 XXXXXXXXXXXXXXXXXXXXXX---WHRRLGHAPLPVLKHLSFLKHLFANDA-------S 1850
WH RLGH S+ K+ +D
Sbjct: 561 ECTSVDINSSVTEKQYCNAVVDSALWHSRLGHP--------SYEKNDVLHDVLGLPKRNK 612
Query: 1851 PSLDTCDVCHKSKQHRLPFPTSRIQTSKCFDLVHIDVWGPYN*SSLTSTPFFLTLVDDFS 2030
L C +C K+KQ L FP+ + FDL+HID WGP+ + +FLT+VDD+S
Sbjct: 613 EDLVHCSICQKAKQKHLSFPSKNNMSENKFDLIHIDTWGPFATPTTEGYKYFLTIVDDYS 672
Query: 2031 RATWVFLMSHKSQVSRLLKQFLQMVQTQFQASVKIVRSDNGTEFTSKECQEVFVSAGIIH 2210
RATWV+LM K+ V ++ FL+MV+TQ+ VK VRSDN E + ++ + GII
Sbjct: 673 RATWVYLMKAKNDVLQIFPDFLKMVETQYGTLVKAVRSDNAPEL---RFEALYQAKGIIS 729
Query: 2211 QRSCVFTPQQNGIVERKHRHLLNVARALMFQSNLPSKFWPYSVLSAAYLINRIPSLLLNW 2390
SC TPQQN +VERKH+H+LNVARALMF++N+P +FW +LSA +LINR+P+ LL+
Sbjct: 730 YHSCPETPQQNSVVERKHQHILNVARALMFEANMPLEFWGDCILSAVFLINRLPTPLLSN 789
Query: 2391 RTPFELLHGTTPSYSHLKPFGCLSYATNTHPHKSKFSTRAYRCVFLGYITGQKGYRLYDL 2570
++PFELLH P Y+ LK FGCL Y + + + KF+ RA CVFLGY +G KGY+L DL
Sbjct: 790 KSPFELLHLKVPDYTSLKVFGCLCYESTSPQQRHKFAPRARACVFLGYPSGYKGYKLLDL 849
Query: 2571 DNHCLFSSRDVIFFEDNFPFSNIEVPTDSVPLPLISSDMPDTPQPTAPSHTPSAVPDPSH 2750
+ + + SR V+F+E FPF TD +P D+ D P + PS S
Sbjct: 850 ETNTIHISRHVVFYETVFPF------TDKTIIPRDVFDLVD-PVHENIENPPST--SESA 900
Query: 2751 PLRRSTRVSHPPTWLSNFITNSATTFTSLKFPSSLTDGPLFPISTFPFNYSSNLSDAHHV 2930
P S R S PP +L ++ N+ +T +P++ + NY + LS+
Sbjct: 901 PKVSSKRESRPPGYLQDYFCNAV---------PDVTKDVRYPLNAY-INY-TQLSEEFTA 949
Query: 2931 VLANVSLIQEPRTY 2972
+ V+ EP TY
Sbjct: 950 YICAVNKYPEPCTY 963
>gb|KYP64173.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 814
Score = 465 bits (1196), Expect = e-146
Identities = 288/794 (36%), Positives = 413/794 (52%), Gaps = 22/794 (2%)
Frame = +3
Query: 315 KLGFITGRIEVPEAGSPKYDQWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGK 494
K GFI G IE P +G+ + + W M++SWILN+I L Y ++K+LW+DI +
Sbjct: 1 KWGFIDGTIEQPRSGTIELEDWWTGQSMLVSWILNTIEPTLRSTISYMETSKELWEDIKE 60
Query: 495 RFGDCNGPIIYQLEREIASINQGSMSVVEYFTK*KRLWDELACLMPLPICDNE-----IR 659
RF NGP I QL+ E+A QG M++V Y+ K LWDELA +P C I
Sbjct: 61 RFSVVNGPRIQQLKIELAECKQGGMTIVGYYGNLKTLWDELANYQQIPTCTCGNCKCGIT 120
Query: 660 RLIDERDMNRKLVQFLMGLHES-YDQVRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTY 836
+++R K+ QFLMGL +S Y VR LL DPLP +++ Y+ +++ E+ + + +
Sbjct: 121 TKLEKRKEEEKVHQFLMGLDDSLYGTVRLNLLATDPLPPLNRVYATLVQEERMKTIARSK 180
Query: 837 IDNNEHVAMSTRINNFDRRNAGRGVMTGGRGPRTGDWNTGRGRGVYRRTKEEKEKLVCKH 1016
E V G V T GR GR G ++ + C +
Sbjct: 181 EKRAEVV--------------GLVVQTAGR-------TKGRSDG-------REKSMFCLN 212
Query: 1017 CTMTGHEIS*CFKLHGYPNWF-KKLREDRNALAKYSITNDFGGCEPQKDTHQLDIATLIK 1193
C GH+ + CF+L GYP+W+ ++ R++ + + G + + HQ
Sbjct: 213 CNKAGHDATNCFQLVGYPDWWGERPRQETKIIGRGK-----GQQQQTRSGHQ-------- 259
Query: 1194 QEISKALAGRVQQGQNSSEQSMNFT*YTDFAG----------TILPLLNHHALTTLESLD 1343
K + R Q SS + D AG T++ LLN+H E +
Sbjct: 260 -RRGKGMTIRANAAQTSSGGTSVKVTDADKAGLMGLSNEQWQTLVDLLNNHKGDATERMS 318
Query: 1344 --KDSWILDTGASKHMCASPSLMQNLVPISSLVSICLPDGTTKVVTHSGQVAISSGLLLH 1517
+ +WI+DTGAS HM + L+ + + LP+G V T G V + G +
Sbjct: 319 GKETTWIIDTGASNHMTGNLGLLHRTKTLQGC-PVGLPNGKEAVATKEGDVILEGGQKIS 377
Query: 1518 DVLLVPSFKYNFLSIAQLTQ*SHLKCLFFPSHCLIQDLRTEEVKDMGKVVGCLYVLQIST 1697
VL VPS N +S++QL ++ F S C++QD + +G+ LY +
Sbjct: 378 KVLYVPSLNCNLISVSQLIDDANCVVQFTNSLCVMQDRTLRMLIRVGERRNGLYYFR--- 434
Query: 1698 XXXXXXXXXXXXXXXXXXXXXXXWHRRLGHAPLPVLKHLSF---LKHLFANDASPSLDTC 1868
WH+R+GH L + + +S ++ N A C
Sbjct: 435 -----GIRHEKVFKMEEVSTFDLWHKRMGHPSLKITQMISNGSNKNNMIGNKA------C 483
Query: 1869 DVCHKSKQHRLPFPTSRIQTSKCFDLVHIDVWGPYN*SSLTSTPFFLTLVDDFSRATWVF 2048
DVC ++KQ R FP S + S F+L+H D+WGPY S +FLT+VDDFSRA WV+
Sbjct: 484 DVCQRAKQTRESFPLSNRKASSSFELIHCDLWGPYRTPSSCGAYYFLTIVDDFSRAFWVY 543
Query: 2049 LMSHKSQVSRLLKQFLQMVQTQFQASVKIVRSDNGTEFTSKECQEVFVSAGIIHQRSCVF 2228
L+ K +VS +L F+ +V+ Q+ +KI+RSDNGTEFT + F+ GI+ SC
Sbjct: 544 LLIDKKEVSHVLLHFIALVERQYNKRIKIIRSDNGTEFTCLRMK--FLECGIVFHTSCTR 601
Query: 2229 TPQQNGIVERKHRHLLNVARALMFQSNLPSKFWPYSVLSAAYLINRIPSLLLNWRTPFEL 2408
T QQNG VERKHRH+LNVARAL+FQ NLP FW VL+A YLINR P+ LL ++P+E+
Sbjct: 602 TLQQNGRVERKHRHILNVARALIFQGNLPISFWGECVLTACYLINRTPTPLLGGKSPYEV 661
Query: 2409 LHGTTPSYSHLKPFGCLSYATNTHPHKSKFSTRAYRCVFLGYITGQKGYRLYDLDNHCLF 2588
L+G PSY HLK FG L YA + KF++R+ RCVF+GY G+KG++LYDLD + F
Sbjct: 662 LNGEPPSYDHLKVFGSLCYAHDQGRKGDKFASRSRRCVFVGYERGKKGWKLYDLDKNTYF 721
Query: 2589 SSRDVIFFEDNFPF 2630
SRDV FFE+ FPF
Sbjct: 722 VSRDVNFFENEFPF 735
>ref|XP_013709762.1| PREDICTED: uncharacterized protein LOC106413549 [Brassica napus]
Length = 957
Score = 466 bits (1198), Expect = e-145
Identities = 321/1009 (31%), Positives = 475/1009 (47%), Gaps = 84/1009 (8%)
Frame = +3
Query: 198 PLKLYSSDHPGLSLVTNQLTGNNYLSWRRSMLIALGAKTKLGFITGRIEVPEAGSPKYDQ 377
P L+ SD+PG + L G+NY W +L AK K+ FI G ++ P +P +
Sbjct: 23 PYSLHPSDNPGALITPVILKGDNYSEWATEFWNSLQAKQKIEFIDGTVQKPST-NPDLSR 81
Query: 378 WRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLEREIASIN 557
W V+ M++ W+ SI + ++ A LW+ + +RF NG + ++ EI +
Sbjct: 82 WTAVNSMIVGWMRTSIDPLVRSTVSHTPDAIQLWESLKRRFSIKNGVRKHLIQDEITNCK 141
Query: 558 QGSMSVVEYFTK*KRLWDELACLMPLPICDNEIRRLIDERDMNRKLVQFLMGLHES-YDQ 734
Q +V++Y+ + +LW+EL P C + +I++ + K+ +FL GL ES +
Sbjct: 142 QNGQTVLDYYGRLSKLWEELQSFQPTLSCTCDASSIIEKEKEDAKVHKFLFGLDESRFSS 201
Query: 735 VRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAMSTRINNFDRRNAGRGVM 914
+RSQ++ +PLP+++ YS V+R E+ + + A N+F R+ R
Sbjct: 202 IRSQIIDEEPLPDLNLVYSRVIRAEQLLQTSPVHTTSPTVAAA----NSFRSRDPNR--- 254
Query: 915 TGGRGPRTGDWNTGRGRGVYRRTKEEKEKLVCKHCTMTGHEIS*CFKLHGYPNWFKKLRE 1094
C HC GHE S CF LHGYP+WF + ++
Sbjct: 255 ------------------------------FCTHCNRKGHEASECFLLHGYPDWFNE-QQ 283
Query: 1095 DRNALAKYSITNDFGGCEPQKDTHQLDIATLIKQEISKALAGRVQQGQNSSEQSMNFT*Y 1274
+ + S GG + GR + + + + N
Sbjct: 284 QHSGQSSTSAQRGRGGSRGR---------------------GRGRANASRTTTTTNMLHS 322
Query: 1275 TDFAGTILPLLNHHALTTLESLDKDSW----ILDTGASKHMCASPSLMQNLVPISSLVSI 1442
I L N + +++ + + I+DTGAS HM SL+Q++ I ++
Sbjct: 323 DQITALINLLQNQQSQLSIDKMTGKTTLHDVIIDTGASHHMTGDLSLLQDIHDIIP-SAV 381
Query: 1443 CLPDGTTKVVTHSGQVAISSGLLLHDVLLVPSFKYNFLSIAQLTQ*SHLKCLFFPSHCLI 1622
P+G T +G + +SS L DVL VP F +S+++L + + +F + C++
Sbjct: 382 TFPNGQASRATKTGTLYLSSDYFLTDVLYVPDFNCTLISVSKLLKQTGCIAIFTDTLCVL 441
Query: 1623 QDLRTEEVKDMGKVVGCLYVLQISTXXXXXXXXXXXXXXXXXXXXXXXWHRRLGHAPLPV 1802
QD T + G+V +Y T WHRRLGH V
Sbjct: 442 QDRFTRTLIGAGEVREGVYYFSGVT-----VARANKTGQTRTPASSVLWHRRLGHPSAKV 496
Query: 1803 LKHLSFLKHLFANDASPSLDTCDVCHKSKQHRLPFPTSRIQTSKCFDLVHIDVWGPYN*S 1982
L L + F + S CDVC ++KQ R F S + S F LVH DVWGPY
Sbjct: 497 LSSLDDFQFDFQHTHS-----CDVCFRAKQTREVFSESFNKASAPFALVHCDVWGPYRTP 551
Query: 1983 SLTSTPFFLTLVDDFSRATWVFLMSHKSQVSRLLKQFLQMVQTQFQASVKIVRSDNGTEF 2162
S +FLTLVDD+SRA W+ LM KS+V+ LLK F M QF+ V+ R+DNG+EF
Sbjct: 552 SSCGAVYFLTLVDDYSRAVWIHLMLEKSEVASLLKNFCSMTVRQFRFPVQTFRTDNGSEF 611
Query: 2163 TSKECQEVFVSAGIIHQRSCVFTPQQNGIVERKHRHLLNVARALMFQSNLPSKFWPYSVL 2342
+ ++ F GI+HQ SCV TPQQNG VERKHRHLLNVARA +FQ+NLP+ FW SVL
Sbjct: 612 MT--LKQYFRQQGILHQTSCVDTPQQNGRVERKHRHLLNVARACLFQANLPTTFWGESVL 669
Query: 2343 SAAYLINRIPSLLLNWRTPFELLHGTTPSYSHLKPFGCLSYATNTHPHKSKFSTRAYRCV 2522
+AA+LINR P+ +LN +TP+E+LHG+ PS+ L+ FGCL YA H K KF R+ +C+
Sbjct: 670 TAAHLINRTPTPVLNGKTPYEVLHGSPPSFGSLRVFGCLCYAHRRHRDKDKFGDRSRKCL 729
Query: 2523 FLGYITGQKGYRLYDLDNHCLFSSRDVIFFEDNFPFSNIEVPTDSV-------------- 2660
F+GY G+K + LYD+D + F+SRDVIF ED FP + TD +
Sbjct: 730 FVGYPYGKKAWNLYDIDANEFFTSRDVIFCEDTFP--GLPHDTDQLHQPDIAHDDYVSVS 787
Query: 2661 PLPLISSDMP--------------------DTPQPTAPSHTPSAV--------------- 2735
LPLI + +P +TP T P PS++
Sbjct: 788 SLPLIPTVLPSLPTNNDTPTVTQPETIPPLETPTTTPPVTLPSSINSPATTILPSATPTT 847
Query: 2736 --------------PDPSHP-----LRRSTRVSHPPTWLSNFITNSATTFTSLKFPSS-- 2852
P+P+ P L R RV P L N++T+SA +L SS
Sbjct: 848 SLPPPPTQLLNKEPPEPTSPGLPELLGRGHRVREPSVLLKNYVTHSAHANNTLLSNSSGS 907
Query: 2853 -------LTDGPLFPISTF--PFNYSSNLSDAHHVVLANVSLIQEPRTY 2972
++ ++PIS + +YS N H LA + EP++Y
Sbjct: 908 SPSHSTTVSGNTMYPISRYLSDASYSPN----HKAFLAALITEDEPKSY 952
>gb|KYP40816.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1298
Score = 473 bits (1217), Expect = e-144
Identities = 291/837 (34%), Positives = 435/837 (51%), Gaps = 15/837 (1%)
Frame = +3
Query: 174 DEANYDDDPLKLYSSDHPGLSLVTNQLTGNNYLSWRRSMLIALGAKTKLGFITGRIEVPE 353
DE+ + P L+ ++ V+ L G NY SW + M L ++ K F+ G I+ P
Sbjct: 17 DESQNPNSPYYLHPGENINTLTVSPVLDGPNYHSWSKLMKRGLQSRNKYKFVDGTIKEPP 76
Query: 354 AGSPKYDQWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQL 533
A +D W + + MVISWI S+S + ++ +Y ++A+DLW D+ RF + + L
Sbjct: 77 ANDFLHDVWIRCNTMVISWITRSVSLQIAQSIVYIDNAEDLWKDLRDRFSKGDHFRMSDL 136
Query: 534 EREIASINQGSMSVVEYFTK*KRLWDELACLMPLPICDNEIRRLIDERDMNRK------L 695
+EI SI QG ++ Y T K LW+EL L P+P C ++ D R +
Sbjct: 137 LQEIHSIKQGERTISTYHTDLKTLWEELEILRPIPACSCTVKCTCDLVKTVRNYKETEYV 196
Query: 696 VQFLMGLHESYDQVRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYIDNNEHVAMSTRI 875
+ FL GL++SY+ VRSQ+L+MDPLPN++K +S+VL+ E+Q +L + V + I
Sbjct: 197 ICFLKGLNDSYNTVRSQVLMMDPLPNINKVFSLVLQQERQVLGNLL-----QEVNLVASI 251
Query: 876 NNFDRRNAGRGVMTGGRGPRTGDWNTGRGRGVYRRTKEEKEKLVCKHCTMTGHEIS*CFK 1055
N + GR + GRG RGR R + +K +C C H + C+
Sbjct: 252 TNNKQSFGGRNGSSSGRG---------RGRFNQRNFSNQPQK-ICTFCGKERHTVETCYF 301
Query: 1056 LHGYP-NWFKKLREDRNALAKYSITNDFGGCEPQKDTHQL------DIATLIKQEISKAL 1214
HG+P N+ K + + + Y+ + + H++ ++++ I E L
Sbjct: 302 KHGFPPNFNFKDKRQTSTVNSYTSDSSTSPNTVEGSDHKITGKEYTEVSSTITTEQYNQL 361
Query: 1215 AGRVQQGQNSSEQSMNFT*YTDFAGTILPLLNHHALTTLESLDKDSWILDTGASKHMCAS 1394
+ +G N S ++ G IL + L + WILD+GA+ H+ S
Sbjct: 362 M-EILKGSNVSGETHAVDNLQQHPGNILSTQKE------QKLPDNVWILDSGATDHVSNS 414
Query: 1395 PSLMQNLVPISSLVSICLPDGTTKVVTHSGQVAISSGLLLHDVLLVPSFKYNFLSIAQLT 1574
S + I + I LP+G SG VA S L DVL +P F YN +S+ ++
Sbjct: 415 LSCYDSYNTIEP-IRIKLPNGFITQTQISGTVAFSGRFFLQDVLYIPDFNYNIISVGKIV 473
Query: 1575 Q*SHLKCLFFPSHCLIQDLRTEEVKDMGKVVGCLYVLQIS--TXXXXXXXXXXXXXXXXX 1748
+ + K +F C IQD + + + LY+LQ +
Sbjct: 474 KNFNCKIVFDKLCCYIQDHNNKLMIGPANLQCNLYILQRQNFSENKIVNSARTSSDNNMN 533
Query: 1749 XXXXXXWHRRLGHAPLPVLKHLSFLKHLFANDASPSLDTCDVCHKSKQHRLPFPTSRIQT 1928
WH RLGH VL+ + K F CD CH +KQ +L FP S T
Sbjct: 534 NSNFDLWHYRLGHPSDSVLQQI---KGQFPYVKYDHKLVCDYCHLAKQCKLSFPISINST 590
Query: 1929 SKCFDLVHIDVWGPYN*SSLTSTPFFLTLVDDFSRATWVFLMSHKSQVSRLLKQFLQMVQ 2108
+ CFDL+H+D+WGP + S+ +FLT+VDDFSR TWVFLM KS+ L++ F+ +
Sbjct: 591 ASCFDLIHMDIWGPLSICSIHGHKYFLTIVDDFSRNTWVFLMKAKSETRTLIQNFISLTF 650
Query: 2109 TQFQASVKIVRSDNGTEFTSKECQEVFVSAGIIHQRSCVFTPQQNGIVERKHRHLLNVAR 2288
TQ++ VKI+RSDNG EF + + S GIIHQ SCV TPQQN + ERKHRH+LNVAR
Sbjct: 651 TQYKKKVKIIRSDNGIEF---RMPDFYNSQGIIHQTSCVETPQQNAVAERKHRHILNVAR 707
Query: 2289 ALMFQSNLPSKFWPYSVLSAAYLINRIPSLLLNWRTPFELLHGTTPSYSHLKPFGCLSYA 2468
+L+F SNLP+ +W Y+VL A +LIN++P+ +L ++PFE+L+ TP+Y LK FG L +
Sbjct: 708 SLLFHSNLPNVYWSYAVLHAIHLINKLPTAVLKGKSPFEILNKKTPAYLDLKVFGSLCFV 767
Query: 2469 TNTHPHKSKFSTRAYRCVFLGYITGQKGYRLYDLDNHCLFSSRDVIFFEDNFPFSNI 2639
+ H++K RA +CV+LG G KGY DL + SR+VIF+E+ FPF +
Sbjct: 768 STLTQHRNKLDPRAKKCVYLGIKVGTKGYIALDLTTREILISRNVIFYENIFPFHKV 824
>emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera]
Length = 1472
Score = 473 bits (1218), Expect = e-143
Identities = 324/949 (34%), Positives = 476/949 (50%), Gaps = 49/949 (5%)
Frame = +3
Query: 195 DPLKLYSSDHPGLSLVTNQLTGNNYLSWRRSMLIALGAKTKLGFITGRIEVP-EAGSPK- 368
+P + SDHPGL L++ L G+NY +W+R+M++AL +K KLGF+ G I+ P E PK
Sbjct: 17 NPYFTHHSDHPGLVLISKSLNGDNYSAWKRAMILALNSKNKLGFVNGSIKTPSEEIDPKG 76
Query: 369 YDQWRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLEREIA 548
Y W + + V SWI+N+++ + + IY + A+ L+
Sbjct: 77 YATWSRCNDTVHSWIVNTLNPEIANSVIYYSIAQQLF----------------------- 113
Query: 549 SINQGSMSVVEYFTK*KRLWDELACLMPLPICDNEIRRLIDERDMNRKLVQFLMGLHESY 728
+ Y+TK K LWDELA + +KL+QFLMGL+ESY
Sbjct: 114 --------ISAYYTKLKGLWDELASYNAAAY---------GAQQDQQKLMQFLMGLNESY 156
Query: 729 DQVRSQLLLMDPLPNVDKAYSIVLRVEKQRNVHLTYI--DNNEHVAMSTRINN------- 881
+R Q+LLM+PLP+V +AYS V + EKQR + T ++ AM+ R N
Sbjct: 157 SAIRGQILLMNPLPSVHQAYSSVSQEEKQRLLISTNAAAESAASAAMAVRSNGKSSATWK 216
Query: 882 --FDRRNAGRGVMT----GGRGPRTGDWNTGR-GRGVY----RRTKEEKEKLVCKHCTMT 1028
DR N R T G + R + G+ GR + RR + + C +C
Sbjct: 217 DGIDRSNTERMEPTDRPFGSQNFRVNRSSQGQDGRPFFDQDRRRMGSGRGRPQCSYCGDM 276
Query: 1029 GHEIS*CFKLHGYPNWFKKLR----EDRNALAKYSITNDFGGCEPQKDTHQLDIATLIKQ 1196
GH + CF+LHGYP K R + N +S N + K L +
Sbjct: 277 GHWVQKCFQLHGYPPGHPKARMNLGSNSNRNKSFSAANQVSEADEGKSA-----VALSET 331
Query: 1197 EISKALAGRVQQGQNSSEQSMNFT*YTDFAGTILPLLNHHALTTLESLDKDSWILDTGAS 1376
++ + L+ Q +NSS + +N L + +WI+D+GA+
Sbjct: 332 QLKQLLSLLNNQDENSSSK-----------------VNAVTKPGLSKVAFRNWIIDSGAT 374
Query: 1377 KHMCASPSLMQNLVPISSLVSICLPDGTTKVVTHSGQVAISSGLLLHDVLLVPSFKYNFL 1556
H+ +S L+ SL + LP G + + ++S LHDVL V +FK + +
Sbjct: 375 DHITSSSKLLHK-DKNCSLPPVLLPSGEKANIVTKWTLPLNSVYYLHDVLFVLTFKVDLI 433
Query: 1557 SIAQLTQ*SHLKCLFFPSHCLIQDLRTEEVKDMGKVV-GCLYVLQISTXXXXXXXXXXXX 1733
+++LT+ + FFP C++Q+L T +GK G Y++ ++T
Sbjct: 434 LVSRLTRGLNCSMTFFPYWCILQNLATRRTIGLGKQRDGLYYLVALATEKSLTNHSSSTN 493
Query: 1734 XXXXXXXXXXX--WHRRLGHAPLPVLKHLSFLKHLFANDASPSLDTCDVCHKSKQHRLPF 1907
WH RLGH LSF+ F N + S + C +C +KQ RLPF
Sbjct: 494 QPACNLAISSTDLWHSRLGHVSP---SRLSFIAKNFLNFSVQSNNACPICPLAKQSRLPF 550
Query: 1908 PTSRIQTSKCFDLVHIDVWGPYN*SSLTSTPFFLTLVDDFSRATWVFLMSHKSQVSRLLK 2087
TS I ++K F+++H +WG Y SL +FLT+VDD++R TW+FLM HK + LLK
Sbjct: 551 GTSAISSTKPFEIIHCHIWGRYQHPSLFGAHYFLTIVDDYTRFTWIFLMRHKDEAQSLLK 610
Query: 2088 QFLQMVQTQFQASVKIVRSDNGTEFTSKECQEVFVSAGIIHQRSCVFTPQQNGIVERKHR 2267
+F V TQF+ +K R+DNG EFTS F G+I Q S V+TPQQNG+VERKHR
Sbjct: 611 RFFSYVFTQFEFCIKTFRNDNGREFTS--LHSFFQDNGVIFQHSYVYTPQQNGVVERKHR 668
Query: 2268 HLLNVARALMFQSNLPSKFWPYSVLSAAYLINRIPSLLLNWRTPFELLHGTTPSYSHLKP 2447
H+L V RAL F + +P++FW L+A ++IN +PS +L+++TPFELL+ PSYS+L
Sbjct: 669 HILQVTRALKFHAQVPTQFWGECALTAVHIINWLPSPVLSFKTPFELLYSKPPSYSYLHV 728
Query: 2448 FGCLSYATNTHPHKSKFSTRAYRCVFLGYITGQKGYRLYDLDNHCLFSSRDVIFFEDNFP 2627
FGCL+YATN H KF RA +F+GY GQK Y+L+DL +F+SRDV F ED FP
Sbjct: 729 FGCLAYATNVHT-SHKFDYRAMSSIFIGYPVGQKAYKLFDLSTKKVFTSRDVKFHEDIFP 787
Query: 2628 FSNIEVPTDSV--------PLPL----ISSDMPDTPQPTAP---SHTPSAVP-----DPS 2747
+ +++ P ++ P+PL ISS + T +P +HT + P D S
Sbjct: 788 YVSLK-PNSTLPSLTHNFGPIPLVAHDISSSLDSTSHALSPLLSNHTSTLSPTTENDDFS 846
Query: 2748 HPLRRSTRVSHPPTWLSNFITNSATTFTSLKFPSSLTDGPLFPISTFPF 2894
P R S V P + + S T+L PSS+ P ++ PF
Sbjct: 847 FPSRPSVLVIKPSSQIDP--NPSPLPSTTLVSPSSVP-----PFASIPF 888
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 471 bits (1211), Expect = e-142
Identities = 327/1012 (32%), Positives = 494/1012 (48%), Gaps = 87/1012 (8%)
Frame = +3
Query: 198 PLKLYSSDHPGLSLVTNQLTGNNYLSWRRSMLIALGAKTKLGFITGRIEVPEAGSPKYDQ 377
P L SSD+PG + + +L G+NY W ML AL AK K GFI G I P P Y+
Sbjct: 31 PYTLASSDNPGAVISSVELNGDNYNQWATEMLNALQAKRKTGFINGTIPRPPPNDPNYEN 90
Query: 378 WRKVDCMVISWILNSISANLVEAFIYSNSAKDLWDDIGKRFGDCNGPIIYQLEREIASIN 557
W V+ M++ WI SI + + + A LW D+ +RF N I+Q+ +++S
Sbjct: 91 WTAVNSMIVGWIRTSIEPKVKATVTFISDAHLLWKDLKQRFSVGNKVRIHQIRAQLSSCR 150
Query: 558 QGSMSVVEYFTK*KRLWDELACLMPLPICDNEIRRL------IDERDMNRKLVQFLMGLH 719
Q +V+EY+ + LW+E P+ +C + R ER+ K+ QF++GL
Sbjct: 151 QDGQAVIEYYGRLSNLWEEYNIYKPVTVCTCGLCRCGATSEPTKERE-EEKIHQFVLGLD 209
Query: 720 ES-YDQVRSQLLLMDPLPNVDKAYSIVLRVEKQ-RNVHLTYIDNNEHVAMSTRINNFDRR 893
ES + + + L+ MDPLP++ + YS V+R E++ +VH+ E V R D
Sbjct: 210 ESRFGGLCATLINMDPLPSLGEIYSRVIREEQRLASVHVRE-QKEEAVGFLARREQLDHH 268
Query: 894 NAGRGVMTGGRGPRTGDWNTGRGRGVYRRTKEEKEKLVCKHCTMTGHEIS*CFKLHGYPN 1073
+ R + R TG R K ++ C +C TGHE C+++ G+P+
Sbjct: 269 S--RVDASSSRSEHTGG---------SRSNSIIKGRVTCSNCGRTGHEKKECWQIVGFPD 317
Query: 1074 WFKKLREDRNALAKYSITNDFGGCEPQ-------KDTHQLDIATLIKQEISKALAGRVQQ 1232
W+ + R + + G Q + + +E + L+ V++
Sbjct: 318 WWSERNGGRGSNGRGRGGRGSNGGRGQGQVMAAHATSSNSSVFPEFTEEHMRVLSQLVKE 377
Query: 1233 GQNSSEQSMNFT*YTDFAGTILPLLNHHALTTLESLDKDSWILDTGASKHMCASPSLMQN 1412
NS S N N L+ L ILD+GAS HM + S + N
Sbjct: 378 KSNSGSTSNN---------------NSDRLSGKTKL--GDIILDSGASHHMTGTLSSLTN 420
Query: 1413 LVPISSLVSICLPDGTTKVVTHSGQVAISSGLLLHDVLLVPSFKYNFLSIAQLTQ*SHLK 1592
+VP+ + DG+ G + +S+ + L +VL VPS +S+++L + +
Sbjct: 421 VVPVPP-CPVGFADGSKAFALSVGVLTLSNTVSLTNVLFVPSLNCTLISVSKLLKQTQCL 479
Query: 1593 CLFFPSHCLIQDLRTEEVKDMGKVVGCLYVLQISTXXXXXXXXXXXXXXXXXXXXXXXWH 1772
F + C +QD ++ + G+ G +Y L T WH
Sbjct: 480 ATFTDTLCFLQDRSSKTLIGSGEERGGVYYLTDVT--------PAKIHTANVDSDQALWH 531
Query: 1773 RRLGHAPLPVLKHLSFLKHLFANDASP-SLDTCDVCHKSKQHRLPFPTSRIQTSKCFDLV 1949
+RLGH VL L LF+ +S + +CDVC ++KQ R FP S +T +CF L+
Sbjct: 532 QRLGHPSFSVLSSLP----LFSKTSSTVTSHSCDVCFRAKQTREVFPESINKTEECFSLI 587
Query: 1950 HIDVWGPYN*SSLTSTPFFLTLVDDFSRATWVFLMSHKSQVSRLLKQFLQMVQTQFQASV 2129
H DVWGPY + +FLT+VDD+SRA W +L+ KS+V ++L FL+ + QF +V
Sbjct: 588 HCDVWGPYRVPASCGAVYFLTIVDDYSRAVWTYLLLEKSEVRQVLTNFLKYAEKQFGKTV 647
Query: 2130 KIVRSDNGTEFTSKECQEVFVSAGIIHQRSCVFTPQQNGIVERKHRHLLNVARALMFQSN 2309
K+VRSDNGTEF F GIIHQ SCV TPQQNG VERKHRH+LNVARAL+FQ++
Sbjct: 648 KMVRSDNGTEFMC--LSSYFRENGIIHQTSCVGTPQQNGRVERKHRHILNVARALLFQAS 705
Query: 2310 LPSKFWPYSVLSAAYLINRIPSLLLNWRTPFELLHGTTPSYSHLKPFGCLSYATNTHPHK 2489
LP KFW S+L+AAYLINR PS +L+ RTP+E+LHG+ P YS L+ FG Y K
Sbjct: 706 LPIKFWGESILTAAYLINRTPSSILSGRTPYEVLHGSKPVYSQLRVFGSACYVHRVTRDK 765
Query: 2490 SKFSTRAYRCVFLGYITGQKGYRLYDLDNHCLFSSRDVIFFEDNFPFSNIEVPT-DSVPL 2666
KF R+ C+F+GY G+KG+++YD++ + SRDVIF E+ FP++ + T S L
Sbjct: 766 DKFGQRSRSCIFVGYPFGKKGWKVYDIERNEFLVSRDVIFREEVFPYAGVNSSTLASTSL 825
Query: 2667 PLISSD---------------------------------------------MPDTPQPTA 2711
P +S D +PD P++
Sbjct: 826 PTVSEDDDWAIPPLEVRGSIDSVETERVVCTTDEVVLDTSVSDSEIPNQEFVPDDTPPSS 885
Query: 2712 P-SHTPSAVPD-PSHPL---------------RRSTRVSHPPTWLSNFIT-NSATTFTSL 2837
P S +PS P+ P+ P+ R+S R +HPP L++++ N+ T +S+
Sbjct: 886 PLSVSPSGSPNTPTTPIVVPVASPIPVSPPKQRKSKRATHPPPKLNDYVLYNAMYTPSSI 945
Query: 2838 KF----PSSLTDGP---LFPISTFPFNYSSNLSDAHHVVLANVSLIQEPRTY 2972
PS + P LFP++ + + + S +H LA ++ EP+ +
Sbjct: 946 HALPADPSQSSTVPGKSLFPLTDYVSD--AAFSSSHRAYLAAITDNVEPKHF 995