BLASTX nr result
ID: Rehmannia27_contig00033399
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00033399
(4705 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotei... 761 0.0
ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotei... 759 0.0
ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotei... 754 0.0
gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposo... 733 0.0
gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposo... 720 0.0
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo... 706 0.0
gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposo... 700 0.0
gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposo... 694 0.0
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 684 0.0
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 681 0.0
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 655 0.0
ref|XP_015168851.1| PREDICTED: uncharacterized protein LOC107062... 638 0.0
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 634 0.0
gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposo... 603 0.0
ref|XP_010683397.1| PREDICTED: uncharacterized protein LOC104898... 573 e-179
gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposo... 548 e-170
ref|XP_012857659.1| PREDICTED: uncharacterized protein LOC105976... 541 e-168
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera] 553 e-167
ref|XP_010325686.1| PREDICTED: uncharacterized protein LOC104649... 535 e-165
ref|XP_010692573.1| PREDICTED: uncharacterized protein LOC104905... 524 e-163
>ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X2 [Tarenaya hassleriana]
Length = 1244
Score = 761 bits (1964), Expect = 0.0
Identities = 468/1240 (37%), Positives = 657/1240 (52%), Gaps = 52/1240 (4%)
Frame = -2
Query: 3570 EPLLLHGSDHPGMMLVSSPLTG-ANYLSWKRSISIALGAKTKLGFINGKIKPPAEESPKF 3394
+PL LH +D + LVS L G ANY W R++ AL AK KLGFI G I P ++
Sbjct: 36 DPLFLHAADSSSVFLVSEKLHGEANYGVWSRAVRKALLAKNKLGFILGTIPQPVDDEEDS 95
Query: 3393 EQWQKVDFMVISWILNSISKEISEAFIYAKSARELWLDIEERFGQSNGPQLYQLQREIST 3214
W + + MV +W+ NS+ +I Y + A E+W+ ++ F Q+N +LY +Q +I +
Sbjct: 96 GSWLRCNAMVCTWLSNSVDPDILTLISYMEDAHEIWMHLQNCFLQTNVSKLYSIQHQIDS 155
Query: 3213 ISQGNASVMVYFTRLKRLWDEYSNLLPTPAC-----VCAGHKQTVENDKST-----RLMQ 3064
+ QG+ ++ YFT+L LW E + P P C C G K + + S +++
Sbjct: 156 LYQGSLNLNSYFTKLNALWKELKHFEPLPVCSCKGCTCGGCKCRISDQWSALFERRSVVR 215
Query: 3063 FLMGLTDAYEQTRSQILLMDPLPDVNKAYSMVLRIEKQRSVHQGLPDGLEGAAMVANTNK 2884
FLM L D++ R QIL+ DPLPD+ +AY++V + E+Q+ LPD + A TN
Sbjct: 216 FLMRLNDSFSAARRQILMSDPLPDLTRAYNLVAQEEQQKLNVSCLPDAV---AFSTTTNS 272
Query: 2883 YMNQRPGPWSGSKPRAQSAPMRKSKEEKAKLICKHCQAPGHEITECFKLVGYPDWFRLP- 2707
+ P S P++ S P + + + IC HC GH ++ CF+L GYP +
Sbjct: 273 SRSPYSFPSSNPPPKSPS-PYPSTSSNRPRPICTHCGMTGHVVSRCFRLHGYPPGHKSHP 331
Query: 2706 --KEQRGRPMANLVSAEPIQDKKDDAGVHKGIQTADLSNIIQQEFAKLMANMSTGGKDKG 2533
+ G P S E Q++ VH + LS Q L +N +
Sbjct: 332 NWNSRSGPPRPKSQSLEKAQNQ-----VHSLLSQL-LSQHKGQGSVSLDSNFAVPSPPSP 385
Query: 2532 GMSFAHFAGYTGKDPSSYQCAFSTFEHLDKGSWIIDTGASRHMCTSLSLLTNLRTISDPI 2353
G+S + T S F T WI+DTGAS H+C +L L + + I +
Sbjct: 386 GISLVTYPLLT---TSPSNITFPT------AVWILDTGASTHVCCNLGLFSEVHDIP-VV 435
Query: 2352 TVFMPDGTSKSVTHIGDVFISSDLSLTNVLFVPTFKCNLLSIAQLTQDSNCKCTFYPSHC 2173
+V +P+G+S VT G V +SS ++L++VLF+PTF NLLS++ LTQ ++C F+
Sbjct: 436 SVSLPNGSSLKVTQAGTVLLSSSITLSSVLFIPTFHYNLLSVSCLTQQTSCSVHFFRDSF 495
Query: 2172 LFQDLKTDRVMAVGQAVGKLYMLQV------TSSVPSSFLQNSLLTTYTDDSCNTEQIDT 2011
+ QDL ++ G+ + LY+L++ T S+PS F TT+
Sbjct: 496 IIQDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFD----------- 544
Query: 2010 HCNNVLTLWHKRLGHASCNTLKHLPFLHSLCTETLQHDLKNCEVCHISKQHRHPFPTSYS 1831
LWH RLGH S + + L T + +C VC ++KQ R FP S
Sbjct: 545 -------LWHHRLGHPSDIRVHSIDKSSELKFSTSETSSISCPVCPLAKQRRLSFPVSSH 597
Query: 1830 CTSAPFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCTSTYLMSHKSQVPYLLEKFIL 1651
+ PFEL+HVDVWGP + H +FL++VDDYSRCT YL+ KS V +F+
Sbjct: 598 VSKFPFELLHVDVWGPCSEISTDGHR-FFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVS 656
Query: 1650 MVKNQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQRSCVYTPQQNGIVERKHRHLLD 1471
V+NQF + RSDN E SLF GI+HQ SC YTPQQN IVERKH+H+L+
Sbjct: 657 FVENQFNASIKCVRSDNAPEL---GFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILN 713
Query: 1470 TARALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTPYEMLYHKAPDYSLLKPFGCL 1291
ARALLFQS +P+ FW +LT+ YLINR PS LL+ KTP+E+L +P YS L+ FGCL
Sbjct: 714 VARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCL 773
Query: 1290 AFATNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVTHKFLVTREAYFVESEFPTYTT 1111
+ + + + KF+PRA +FLGY G KGYK+ +L ++ L++R F E+ FP +
Sbjct: 774 CYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLISRNVVFHETTFPFKSF 833
Query: 1110 DTSPPL--PIPPSNDTDYFST--------------------XXXXXXXXXXXXXXXXXXX 997
S P P P S ++ +
Sbjct: 834 PQSQPALDPFPQSVSPFFYESISPQNLSSSSALSPVSQEFPTDPISSLGSSETDSSGFVT 893
Query: 996 XXXXXLRKAPRHTSKPARLTDFVTY-----SSTTPQPTTAFPEALXXXXXXXXXXXXXXX 832
+ + R + PA L+D+ Y S+ P P T +P
Sbjct: 894 SSSAHVTRPQRQSKTPAYLSDYHCYLISHNSTPHPNPVTPYP----LSACLTYDLLSPSY 949
Query: 831 XXXXXXXXXMQEPSSYTQASKDPGWVEAMNKELEALELNNTWVLTTLPQGKSAIGCKWVY 652
EP SYTQA+K W +AM ELEAL NTW + TLP GK+A+GCKWV+
Sbjct: 950 RTFALNITTAPEPQSYTQAAKFESWRQAMKLELEALIRTNTWSICTLPDGKNAVGCKWVF 1009
Query: 651 KVKRHPDGTVERLKARLVAKGYHQVYGVDYMDSFSPVAKLVTVRMLIAVATLKGWPLHQL 472
K K + DG++ER KARLVAKGY Q+ GVD+ ++FSPVAK+ TVR+L+A+A W ++Q+
Sbjct: 1010 KTKYNADGSIERHKARLVAKGYTQLEGVDFSETFSPVAKMTTVRVLLALAAKYNWLINQM 1069
Query: 471 DINNAFLHGFLDEAIYMQPPLGY-----KKARAGEVCLLKRSLYGLKQASRQWNTEFCSK 307
D++NAFL+G LDE IYM+ P GY +K + VC L+RSLYGLKQASRQWN +
Sbjct: 1070 DVSNAFLNGDLDEEIYMKLPPGYSDLQGEKVSSSSVCKLQRSLYGLKQASRQWNQKLSQV 1129
Query: 306 LTAYGFLQSPHDSCLFIKHTADTLLFVLIYVDDVLVTGSDIDAISHLKQYLDDLFTIKDL 127
L A GFLQ D+ LF+K L+ VL+YVDD+L+TG+D IS LK L F IKDL
Sbjct: 1130 LLAAGFLQVQSDNSLFLKRNGSQLVAVLVYVDDLLITGNDAAMISDLKDTLHSSFEIKDL 1189
Query: 126 GVANYFLGLELARTSSGTYLNQRKYVLDILSDMGLLDCKS 7
G +YFLGLE+AR+ G QR DI + G+ CK+
Sbjct: 1190 GPLHYFLGLEVARSKQGPDTTQR---ADICNGEGI--CKT 1224
>ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X1 [Tarenaya hassleriana]
Length = 1275
Score = 759 bits (1960), Expect = 0.0
Identities = 468/1259 (37%), Positives = 663/1259 (52%), Gaps = 71/1259 (5%)
Frame = -2
Query: 3570 EPLLLHGSDHPGMMLVSSPLTG-ANYLSWKRSISIALGAKTKLGFINGKIKPPAEESPKF 3394
+PL LH +D + LVS L G ANY W R++ AL AK KLGFI G I P ++
Sbjct: 36 DPLFLHAADSSSVFLVSEKLHGEANYGVWSRAVRKALLAKNKLGFILGTIPQPVDDEEDS 95
Query: 3393 EQWQKVDFMVISWILNSISKEISEAFIYAKSARELWLDIEERFGQSNGPQLYQLQREIST 3214
W + + MV +W+ NS+ +I Y + A E+W+ ++ F Q+N +LY +Q +I +
Sbjct: 96 GSWLRCNAMVCTWLSNSVDPDILTLISYMEDAHEIWMHLQNCFLQTNVSKLYSIQHQIDS 155
Query: 3213 ISQGNASVMVYFTRLKRLWDEYSNLLPTPAC-----VCAGHKQTVENDKST-----RLMQ 3064
+ QG+ ++ YFT+L LW E + P P C C G K + + S +++
Sbjct: 156 LYQGSLNLNSYFTKLNALWKELKHFEPLPVCSCKGCTCGGCKCRISDQWSALFERRSVVR 215
Query: 3063 FLMGLTDAYEQTRSQILLMDPLPDVNKAYSMVLRIEKQRSVHQGLPDGLEGAAMVANTNK 2884
FLM L D++ R QIL+ DPLPD+ +AY++V + E+Q+ LPD + A TN
Sbjct: 216 FLMRLNDSFSAARRQILMSDPLPDLTRAYNLVAQEEQQKLNVSCLPDAV---AFSTTTNS 272
Query: 2883 YMNQRPGPWSGSKPRAQSAPMRKSKEEKAKLICKHCQAPGHEITECFKLVGYPDWFRL-- 2710
+ P S P++ S P + + + IC HC GH ++ CF+L GYP +
Sbjct: 273 SRSPYSFPSSNPPPKSPS-PYPSTSSNRPRPICTHCGMTGHVVSRCFRLHGYPPGHKSHP 331
Query: 2709 ----------PKEQRGRPMANLVSAEPIQDKKDDA-GVHKGIQTADLSNIIQQEFAKLMA 2563
PK Q N V+ + + A V + + N + Q + L
Sbjct: 332 NWNSRSGPPRPKSQSLEKAQNQVNLVDVGSASNAALAVAQSVDGNTGQNTLAQVHSLLSQ 391
Query: 2562 NMSTGGKDKGGMSFAHFAGYTGKDPSSYQCAFSTFEHLDKGS---------WIIDTGASR 2410
+S + KG S + + + P S + T+ L WI+DTGAS
Sbjct: 392 LLS---QHKGQGSVSLDSNFAVPSPPSPGISLVTYPLLTTSPSNITFPTAVWILDTGAST 448
Query: 2409 HMCTSLSLLTNLRTISDPITVFMPDGTSKSVTHIGDVFISSDLSLTNVLFVPTFKCNLLS 2230
H+C +L L + + I ++V +P+G+S VT G V +SS ++L++VLF+PTF NLLS
Sbjct: 449 HVCCNLGLFSEVHDIP-VVSVSLPNGSSLKVTQAGTVLLSSSITLSSVLFIPTFHYNLLS 507
Query: 2229 IAQLTQDSNCKCTFYPSHCLFQDLKTDRVMAVGQAVGKLYMLQV------TSSVPSSFLQ 2068
++ LTQ ++C F+ + QDL ++ G+ + LY+L++ T S+PS F
Sbjct: 508 VSCLTQQTSCSVHFFRDSFIIQDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCT 567
Query: 2067 NSLLTTYTDDSCNTEQIDTHCNNVLTLWHKRLGHASCNTLKHLPFLHSLCTETLQHDLKN 1888
TT+ LWH RLGH S + + L T + +
Sbjct: 568 TLSATTFD------------------LWHHRLGHPSDIRVHSIDKSSELKFSTSETSSIS 609
Query: 1887 CEVCHISKQHRHPFPTSYSCTSAPFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCTS 1708
C VC ++KQ R FP S + PFEL+HVDVWGP + H +FL++VDDYSRCT
Sbjct: 610 CPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEISTDGHR-FFLSIVDDYSRCTW 668
Query: 1707 TYLMSHKSQVPYLLEKFILMVKNQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQRSC 1528
YL+ KS V +F+ V+NQF + RSDN E SLF GI+HQ SC
Sbjct: 669 VYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPEL---GFKSLFAKKGILHQFSC 725
Query: 1527 VYTPQQNGIVERKHRHLLDTARALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTPY 1348
YTPQQN IVERKH+H+L+ ARALLFQS +P+ FW +LT+ YLINR PS LL+ KTP+
Sbjct: 726 PYTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPF 785
Query: 1347 EMLYHKAPDYSLLKPFGCLAFATNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVTHK 1168
E+L +P YS L+ FGCL + + + + KF+PRA +FLGY G KGYK+ +L ++
Sbjct: 786 ELLTGCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNA 845
Query: 1167 FLVTREAYFVESEFPTYTTDTSPPL--PIPPSNDTDYFST-------------------- 1054
L++R F E+ FP + S P P P S ++ +
Sbjct: 846 VLISRNVVFHETTFPFKSFPQSQPALDPFPQSVSPFFYESISPQNLSSSSALSPVSQEFP 905
Query: 1053 XXXXXXXXXXXXXXXXXXXXXXXXLRKAPRHTSKPARLTDFVTY-----SSTTPQPTTAF 889
+ + R + PA L+D+ Y S+ P P T +
Sbjct: 906 TDPISSLGSSETDSSGFVTSSSAHVTRPQRQSKTPAYLSDYHCYLISHNSTPHPNPVTPY 965
Query: 888 PEALXXXXXXXXXXXXXXXXXXXXXXXXMQEPSSYTQASKDPGWVEAMNKELEALELNNT 709
P EP SYTQA+K W +AM ELEAL NT
Sbjct: 966 P----LSACLTYDLLSPSYRTFALNITTAPEPQSYTQAAKFESWRQAMKLELEALIRTNT 1021
Query: 708 WVLTTLPQGKSAIGCKWVYKVKRHPDGTVERLKARLVAKGYHQVYGVDYMDSFSPVAKLV 529
W + TLP GK+A+GCKWV+K K + DG++ER KARLVAKGY Q+ GVD+ ++FSPVAK+
Sbjct: 1022 WSICTLPDGKNAVGCKWVFKTKYNADGSIERHKARLVAKGYTQLEGVDFSETFSPVAKMT 1081
Query: 528 TVRMLIAVATLKGWPLHQLDINNAFLHGFLDEAIYMQPPLGY-----KKARAGEVCLLKR 364
TVR+L+A+A W ++Q+D++NAFL+G LDE IYM+ P GY +K + VC L+R
Sbjct: 1082 TVRVLLALAAKYNWLINQMDVSNAFLNGDLDEEIYMKLPPGYSDLQGEKVSSSSVCKLQR 1141
Query: 363 SLYGLKQASRQWNTEFCSKLTAYGFLQSPHDSCLFIKHTADTLLFVLIYVDDVLVTGSDI 184
SLYGLKQASRQWN + L A GFLQ D+ LF+K L+ VL+YVDD+L+TG+D
Sbjct: 1142 SLYGLKQASRQWNQKLSQVLLAAGFLQVQSDNSLFLKRNGSQLVAVLVYVDDLLITGNDA 1201
Query: 183 DAISHLKQYLDDLFTIKDLGVANYFLGLELARTSSGTYLNQRKYVLDILSDMGLLDCKS 7
IS LK L F IKDLG +YFLGLE+AR+ G QR DI + G+ CK+
Sbjct: 1202 AMISDLKDTLHSSFEIKDLGPLHYFLGLEVARSKQGPDTTQR---ADICNGEGI--CKT 1255
>ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X3 [Tarenaya hassleriana]
Length = 1238
Score = 754 bits (1947), Expect = 0.0
Identities = 460/1233 (37%), Positives = 652/1233 (52%), Gaps = 71/1233 (5%)
Frame = -2
Query: 3570 EPLLLHGSDHPGMMLVSSPLTG-ANYLSWKRSISIALGAKTKLGFINGKIKPPAEESPKF 3394
+PL LH +D + LVS L G ANY W R++ AL AK KLGFI G I P ++
Sbjct: 36 DPLFLHAADSSSVFLVSEKLHGEANYGVWSRAVRKALLAKNKLGFILGTIPQPVDDEEDS 95
Query: 3393 EQWQKVDFMVISWILNSISKEISEAFIYAKSARELWLDIEERFGQSNGPQLYQLQREIST 3214
W + + MV +W+ NS+ +I Y + A E+W+ ++ F Q+N +LY +Q +I +
Sbjct: 96 GSWLRCNAMVCTWLSNSVDPDILTLISYMEDAHEIWMHLQNCFLQTNVSKLYSIQHQIDS 155
Query: 3213 ISQGNASVMVYFTRLKRLWDEYSNLLPTPAC-----VCAGHKQTVENDKST-----RLMQ 3064
+ QG+ ++ YFT+L LW E + P P C C G K + + S +++
Sbjct: 156 LYQGSLNLNSYFTKLNALWKELKHFEPLPVCSCKGCTCGGCKCRISDQWSALFERRSVVR 215
Query: 3063 FLMGLTDAYEQTRSQILLMDPLPDVNKAYSMVLRIEKQRSVHQGLPDGLEGAAMVANTNK 2884
FLM L D++ R QIL+ DPLPD+ +AY++V + E+Q+ LPD + A TN
Sbjct: 216 FLMRLNDSFSAARRQILMSDPLPDLTRAYNLVAQEEQQKLNVSCLPDAV---AFSTTTNS 272
Query: 2883 YMNQRPGPWSGSKPRAQSAPMRKSKEEKAKLICKHCQAPGHEITECFKLVGYPDWFRL-- 2710
+ P S P++ S P + + + IC HC GH ++ CF+L GYP +
Sbjct: 273 SRSPYSFPSSNPPPKSPS-PYPSTSSNRPRPICTHCGMTGHVVSRCFRLHGYPPGHKSHP 331
Query: 2709 ----------PKEQRGRPMANLVSAEPIQDKKDDA-GVHKGIQTADLSNIIQQEFAKLMA 2563
PK Q N V+ + + A V + + N + Q + L
Sbjct: 332 NWNSRSGPPRPKSQSLEKAQNQVNLVDVGSASNAALAVAQSVDGNTGQNTLAQVHSLLSQ 391
Query: 2562 NMSTGGKDKGGMSFAHFAGYTGKDPSSYQCAFSTFEHLDKGS---------WIIDTGASR 2410
+S + KG S + + + P S + T+ L WI+DTGAS
Sbjct: 392 LLS---QHKGQGSVSLDSNFAVPSPPSPGISLVTYPLLTTSPSNITFPTAVWILDTGAST 448
Query: 2409 HMCTSLSLLTNLRTISDPITVFMPDGTSKSVTHIGDVFISSDLSLTNVLFVPTFKCNLLS 2230
H+C +L L + + I ++V +P+G+S VT G V +SS ++L++VLF+PTF NLLS
Sbjct: 449 HVCCNLGLFSEVHDIP-VVSVSLPNGSSLKVTQAGTVLLSSSITLSSVLFIPTFHYNLLS 507
Query: 2229 IAQLTQDSNCKCTFYPSHCLFQDLKTDRVMAVGQAVGKLYMLQV------TSSVPSSFLQ 2068
++ LTQ ++C F+ + QDL ++ G+ + LY+L++ T S+PS F
Sbjct: 508 VSCLTQQTSCSVHFFRDSFIIQDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCT 567
Query: 2067 NSLLTTYTDDSCNTEQIDTHCNNVLTLWHKRLGHASCNTLKHLPFLHSLCTETLQHDLKN 1888
TT+ LWH RLGH S + + L T + +
Sbjct: 568 TLSATTFD------------------LWHHRLGHPSDIRVHSIDKSSELKFSTSETSSIS 609
Query: 1887 CEVCHISKQHRHPFPTSYSCTSAPFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCTS 1708
C VC ++KQ R FP S + PFEL+HVDVWGP + H +FL++VDDYSRCT
Sbjct: 610 CPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEISTDGHR-FFLSIVDDYSRCTW 668
Query: 1707 TYLMSHKSQVPYLLEKFILMVKNQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQRSC 1528
YL+ KS V +F+ V+NQF + RSDN E SLF GI+HQ SC
Sbjct: 669 VYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPEL---GFKSLFAKKGILHQFSC 725
Query: 1527 VYTPQQNGIVERKHRHLLDTARALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTPY 1348
YTPQQN IVERKH+H+L+ ARALLFQS +P+ FW +LT+ YLINR PS LL+ KTP+
Sbjct: 726 PYTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPF 785
Query: 1347 EMLYHKAPDYSLLKPFGCLAFATNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVTHK 1168
E+L +P YS L+ FGCL + + + + KF+PRA +FLGY G KGYK+ +L ++
Sbjct: 786 ELLTGCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNA 845
Query: 1167 FLVTREAYFVESEFPTYTTDTSPPL--PIPPSNDTDYFST-------------------- 1054
L++R F E+ FP + S P P P S ++ +
Sbjct: 846 VLISRNVVFHETTFPFKSFPQSQPALDPFPQSVSPFFYESISPQNLSSSSALSPVSQEFP 905
Query: 1053 XXXXXXXXXXXXXXXXXXXXXXXXLRKAPRHTSKPARLTDFVTY-----SSTTPQPTTAF 889
+ + R + PA L+D+ Y S+ P P T +
Sbjct: 906 TDPISSLGSSETDSSGFVTSSSAHVTRPQRQSKTPAYLSDYHCYLISHNSTPHPNPVTPY 965
Query: 888 PEALXXXXXXXXXXXXXXXXXXXXXXXXMQEPSSYTQASKDPGWVEAMNKELEALELNNT 709
P EP SYTQA+K W +AM ELEAL NT
Sbjct: 966 P----LSACLTYDLLSPSYRTFALNITTAPEPQSYTQAAKFESWRQAMKLELEALIRTNT 1021
Query: 708 WVLTTLPQGKSAIGCKWVYKVKRHPDGTVERLKARLVAKGYHQVYGVDYMDSFSPVAKLV 529
W + TLP GK+A+GCKWV+K K + DG++ER KARLVAKGY Q+ GVD+ ++FSPVAK+
Sbjct: 1022 WSICTLPDGKNAVGCKWVFKTKYNADGSIERHKARLVAKGYTQLEGVDFSETFSPVAKMT 1081
Query: 528 TVRMLIAVATLKGWPLHQLDINNAFLHGFLDEAIYMQPPLGY-----KKARAGEVCLLKR 364
TVR+L+A+A W ++Q+D++NAFL+G LDE IYM+ P GY +K + VC L+R
Sbjct: 1082 TVRVLLALAAKYNWLINQMDVSNAFLNGDLDEEIYMKLPPGYSDLQGEKVSSSSVCKLQR 1141
Query: 363 SLYGLKQASRQWNTEFCSKLTAYGFLQSPHDSCLFIKHTADTLLFVLIYVDDVLVTGSDI 184
SLYGLKQASRQWN + L A GFLQ D+ LF+K L+ VL+YVDD+L+TG+D
Sbjct: 1142 SLYGLKQASRQWNQKLSQVLLAAGFLQVQSDNSLFLKRNGSQLVAVLVYVDDLLITGNDA 1201
Query: 183 DAISHLKQYLDDLFTIKDLGVANYFLGLELART 85
IS LK L F IKDLG +YFLGLE+AR+
Sbjct: 1202 AMISDLKDTLHSSFEIKDLGPLHYFLGLEVARS 1234
>gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1423
Score = 733 bits (1892), Expect = 0.0
Identities = 431/1215 (35%), Positives = 651/1215 (53%), Gaps = 29/1215 (2%)
Frame = -2
Query: 3567 PLLLHGSDHPGMMLVSSPLTGANYLSWKRSISIALGAKTKLGFINGKIKPPAEESPKFEQ 3388
P L +++P + LVS+PL NYLSW +S+ + LG K KL FI+G + P
Sbjct: 14 PYFLPSNENPSISLVSAPLNDHNYLSWSQSMLLVLGTKNKLAFIDGSLARPVTAGVDQTA 73
Query: 3387 WQKVDFMVISWILNSISKEISEAFIYAKSARELWLDIEERFGQSNGPQLYQLQREISTIS 3208
W + + +VISWI+ S+ + + I+ +A ++W D+++R+ Q + ++ +L EI ++
Sbjct: 74 WDRCNKLVISWIVQSLDTSLIPSVIWMPTASQIWNDLKKRYYQGDAFRISELLEEIYSLK 133
Query: 3207 QGNASVMVYFTRLKRLWDEYSNLLPTPACVCAGHKQTVENDKSTRLMQFLMGLTDAYEQT 3028
QGN S+ YFT L+ LW E + P P+C C + +++FL GL + Y
Sbjct: 134 QGNMSITHYFTTLQGLWQELDHFCPIPSCTCF---------TTECVIRFLKGLNEQYSNV 184
Query: 3027 RSQILLMDPLPDVNKAYSMVLRIEKQRSVHQGLPDGLEGAAMVANTNKYMNQRPGPWSGS 2848
RSQ++LMDPLP V K +SM+L +++R H G ++A T+ N + GS
Sbjct: 185 RSQVMLMDPLPSVQKVFSMIL--QQEREFH-----GTNDNQVLAVTS---NNERNNYKGS 234
Query: 2847 KPRAQSAPMRKSKEEKAKLICKHCQAPGHEITECFKLVGYPDWFRLPKEQRGRPMANLVS 2668
K +++K+ K +C HC GH + C+K G P + + GR + N
Sbjct: 235 KT------FKRNKDYNTK-VCSHCGRIGHLVDSCYKKHGPP-----LQHKHGR-IVNQYQ 281
Query: 2667 AEPIQDKKDDAGVH-KGIQTADLSNIIQQEFAKLMANMSTGGKDKGGMSFAHFAG---YT 2500
+ +D DD VH + + + + N+ E + + + S AG +
Sbjct: 282 SVSDEDTDDDQSVHSQRVVSHNSGNMFTPEQHQALLALLQQSGSTSSHSVNQLAGPSILS 341
Query: 2499 GKDPSSYQCAFSTFEHLDKGSWIIDTGASRHMCTSLSLLTNLRTISDPITVFMPDGTSKS 2320
P +F + D WIIDTGA+ H+C +++ + R I PI + +P+G+ S
Sbjct: 342 SPKPPGMILSFPYSHNSD--CWIIDTGATDHVCKNINFFQSYRRIK-PILIQLPNGSQVS 398
Query: 2319 VTHIGDVFISSDLSLTNVLFVPTFKCNLLSIAQLTQDSNCKCTFYPSHCLFQDLKTDRVM 2140
G V +S LT+VLF+P F NL+S+++L + +C TF S C Q + R++
Sbjct: 399 TCVSGTVLLSKTCYLTDVLFIPNFHFNLISVSKLAKTLSCTLTFSDSDCQIQANHSMRMI 458
Query: 2139 AVGQAVGKLYMLQVTSSVPSSFLQN--SLLTTYTDDSCNTEQIDTHCNNVLTLWHKRLGH 1966
+ LY + SS S+ + + S TY D LWH RLGH
Sbjct: 459 GAAELRAGLYAM--VSSPESNVVHHCTSHFFTYQSD----------------LWHLRLGH 500
Query: 1965 ASCNTLKHLP--FLHSLCTETLQHDLKNCEVCHISKQHRHPFPTSYSCTSAPFELVHVDV 1792
S + L L + C + CE+CH++K R PFP S + + F+L+HVD+
Sbjct: 501 LSHDKLSALKGSYPEIQCNKISLP----CEICHLAKHKRLPFPDSLTKSENVFDLIHVDI 556
Query: 1791 WGPFHCGTLFWHTPYFLTLVDDYSRCTSTYLMSHKSQVPYLLEKFILMVKNQFQCVVNTF 1612
WGP ++F H YFLT+VDD SR T + M +K + LL+ F+ V+ QFQ + T
Sbjct: 557 WGPLSVASIFGHK-YFLTIVDDKSRFTWIFFMKNKFETKLLLQNFVSFVQTQFQQNIKTI 615
Query: 1611 RSDNGTEFVNTQCTSLFHNHGIIHQRSCVYTPQQNGIVERKHRHLLDTARALLFQSKLPI 1432
R+DNG+EF+ + GI+HQ SCV TPQQNG+VERKH+H+L ARAL+FQS +
Sbjct: 616 RTDNGSEFL---LKDWYAKLGIVHQTSCVNTPQQNGVVERKHQHILSMARALMFQSNVSK 672
Query: 1431 DFWPFSLLTATYLINRLPSSLLKWKTPYEMLYHKAPDYSLLKPFGCLAFATNILPHKSKF 1252
FW +++ A +LINRLP+ L+ +PY +LY + PD+S LK FGCLAFA+ + +++K
Sbjct: 673 MFWNYAIGHAVHLINRLPTRFLQQNSPYYVLYSEKPDFSHLKVFGCLAFASTLSHNRTKL 732
Query: 1251 DPRAHKCIFLGYEIGKKGYKLFNLVTHKFLVTREAYFVESEFP-----TYTTDTSPPLPI 1087
+PR+ KC+FLGY G KG+ +++L T + ++R+ F E+ FP + + P +PI
Sbjct: 733 EPRSRKCMFLGYSSGTKGFIMYDLKTRETFISRDVQFYENIFPLQKDFSIQSTDGPVVPI 792
Query: 1086 P----------PS------NDTDYFSTXXXXXXXXXXXXXXXXXXXXXXXXLRKAPRHTS 955
PS ++T++ R + R +
Sbjct: 793 AQMPLTSCDPIPSHTHDNLDETEHEHNSSTLPMTNSSNSDQPNIEINIPEIRRTSQRVKN 852
Query: 954 KPARLTDFVTYSSTTPQPTTAFPEALXXXXXXXXXXXXXXXXXXXXXXXXMQEPSSYTQA 775
+P L D+ + + ++ + EP SY A
Sbjct: 853 RPGYLQDYHCTLAASKVDQSSSTARYPISDYLPYTSYSAVQQSFVSTISSIIEPRSYQDA 912
Query: 774 SKDPGWVEAMNKELEALELNNTWVLTTLPQGKSAIGCKWVYKVKRHPDGTVERLKARLVA 595
W EA+ EL+AL+ TW+LT LP K A+GC+WV+KVK H DG+VER KARLVA
Sbjct: 913 INHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVA 972
Query: 594 KGYHQVYGVDYMDSFSPVAKLVTVRMLIAVATLKGWPLHQLDINNAFLHGFLDEAIYMQP 415
KG+ Q+ G+DY+D+FSPV ++ T+R+ +A+A W +HQLDIN AFLHG L E +YM+P
Sbjct: 973 KGFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHGDLVEEVYMKP 1032
Query: 414 PLGYKKARAGEVCLLKRSLYGLKQASRQWNTEFCSKLTAYGFLQSPHDSCLFIKHTADTL 235
P G + +VC L++SLYGLKQASRQWN + L +GF+QS D LF K T
Sbjct: 1033 PPGLILSSPNKVCKLQKSLYGLKQASRQWNIKLTETLKLFGFVQSKSDYSLFTKRTNIGF 1092
Query: 234 LFVLIYVDDVLVTGSDIDAISHLKQYLDDLFTIKDLGVANYFLGLELARTSSGTYLNQRK 55
+ +L+YVDD++++GSD I +K+ LD F+IKDLG +YFLGLE +R+ G + QRK
Sbjct: 1093 IAILVYVDDLIISGSDETEIMKVKRLLDKQFSIKDLGQLSYFLGLEFSRSDQGISVCQRK 1152
Query: 54 YVLDILSDMGLLDCK 10
Y L++L D GLL K
Sbjct: 1153 YALELLQDTGLLASK 1167
Score = 244 bits (623), Expect = 8e-62
Identities = 123/241 (51%), Positives = 158/241 (65%)
Frame = -2
Query: 4701 ATPFPHGLRLIGECGVPLKDPDQYRRLVGRLLYLNLTRPDISFCVQQLSQFVNNPFSTHW 4522
+TP H RL + DP YRRLVGRL+YL TRPD++F V +LSQF++ P + H+
Sbjct: 1170 STPMDHTTRLHHDPLDLYSDPSSYRRLVGRLIYLTHTRPDLAFAVGKLSQFMHQPNNAHF 1229
Query: 4521 DAALHLLRYLKGCXXXXXXXXXXXXXXXXXXSDADWATCKDTRRPITGYCVFLGECLISW 4342
AA +LRY+K +D+DWATC D+RR I+G+C FLG L+SW
Sbjct: 1230 QAARKVLRYVKATPTKGLFFPSSSDLKLTGYTDSDWATCPDSRRSISGFCFFLGNALVSW 1289
Query: 4341 KSKKQTTVSRSSAEAEYRALSTTVCEVQWITFLASDMLLSLPVPIPLYCDNQAALYIVAN 4162
KSKKQ VSRSS+EAEYRAL+ VCE QW+ L +D L +PI L+CDNQ+ALYI AN
Sbjct: 1290 KSKKQNVVSRSSSEAEYRALALGVCEAQWLHKLLTDFQLQDLIPISLFCDNQSALYIAAN 1349
Query: 4161 PVFHERTKHLEIDCHLVRHQYKAGLVLPQKVASSAQLADMFTKLLASPVFSSFLSKLHMA 3982
PVFHERTKH+EIDCH VR Q +AG + + SS QLAD+ TK L +F F+ KL ++
Sbjct: 1350 PVFHERTKHVEIDCHTVRDQVQAGFIHLAPITSSGQLADILTKPLLPKMFQDFVCKLGLS 1409
Query: 3981 D 3979
+
Sbjct: 1410 N 1410
>gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1445
Score = 720 bits (1859), Expect = 0.0
Identities = 429/1222 (35%), Positives = 655/1222 (53%), Gaps = 36/1222 (2%)
Frame = -2
Query: 3567 PLLLHGSDHPGMMLVSSPLTGANYLSWKRSISIALGAKTKLGFINGKIKPPAEESPKFEQ 3388
PL LH ++P ++LV+ L+ N+ WK + +AL K K F+ G + P P +
Sbjct: 19 PLFLHPGENPALILVTPLLSDNNFPQWKHDMLVALETKNKDQFVLGTLTCPNLSDPLHKA 78
Query: 3387 WQKVDFMVISWILNSISKEISEAFIYAKSARELWLDIEERFGQSNGPQLYQLQREISTIS 3208
W + + MV+SW+ +S++ I ++ ++ +SA E+W D+ +RF + ++ LQ E+
Sbjct: 79 WCRCNKMVMSWLAHSMTPSIRQSVMWIESASEIWRDLCDRFSHGDKFRIADLQEELQNCK 138
Query: 3207 QGNASVMVYFTRLKRLWDEYSNLLPTPACVC-----AGHKQTVENDKSTR-LMQFLMGLT 3046
QG +V Y+TRL+ LW E S AC C G ++ ++ +++FL GL
Sbjct: 139 QGELTVSQYYTRLRILWKELSIYRTVLACSCPVACSCGIFSKIQKERDDDCVIKFLRGLN 198
Query: 3045 DAYEQTRSQILLMDPLPDVNKAYSMVLRIEKQRSVHQGLPDGLEGAAMVA--NTNKYMNQ 2872
D + Q RSQ++LM+P+P + + +S+VL +++R +P + +A +A N + N
Sbjct: 199 DEFSQVRSQVMLMEPMPGLTRTFSLVL--QQEREFGGPVPPIPQESAALATFNDDSARNN 256
Query: 2871 RPGPWSGSKPRAQSAPMRKSKEEKAKLICKHCQAPGHEITECFKLVGYPDWFRLPKEQRG 2692
S R R + ++ C C+ H I CF++ G+P +R +
Sbjct: 257 SSTRGGFSNTRGGGRSGRGNNTGRSTRFCTKCKKTNHTIDTCFQIYGFPPGYRTNGKSTS 316
Query: 2691 R-------------PMANLVSAEPIQDKKDDAGVHKGIQTADLSNIIQQEFAKLMANMST 2551
+LVSA KDD + + + N + ++ L+ +
Sbjct: 317 TTSNTSKSSVNNFDSTTSLVSA---TSAKDD------VTSQNTFNFSKDQYQALLGLLQQ 367
Query: 2550 GGKDKGGMSFAHFAGYTGKDPSSYQCAFST-FEHLDKGSWIIDTGASRHMCTSLSLLTNL 2374
++ AH +C+ ST +L + SWI+D+GA+ H+C S S ++L
Sbjct: 368 SQDPSPSVNSAH------------KCSVSTPGINLFQSSWILDSGATDHICPSKSYFSSL 415
Query: 2373 RTISDPITVFMPDGTSKSVTHIGDVFISSDLSLTNVLFVPTFKCNLLSIAQLTQDSNCKC 2194
I P++V +P+ S + G + + +L+L N L+VP F +L+SI +L NC
Sbjct: 416 IPIK-PVSVKLPNNQSVFACYSGTIHL-GNLTLYNALYVPDFSVHLISIPKLVTTLNCIV 473
Query: 2193 TFYPSHCLFQDLKTDRVM-AVGQAVGKLYMLQVTSSVPSSFLQNSLLTTYTDDSCNTEQI 2017
F C+ T +++ A Q G +LQ S+ S N+ T +
Sbjct: 474 IFCEYDCIIVQRHTFKMIGAAKQQSGLFQLLQHNDSLGFSTTGNNCTTVL------ATTL 527
Query: 2016 DTHCNNVLTLWHKRLGHASCNTLKHLPFLHSLCTETLQHDLKNCEVCHISKQHRHPFPTS 1837
+ + +N ++WH +LGH S L+ L ++ L H C++C +KQ + PFP S
Sbjct: 528 NDNFSNSTSVWHAKLGHPSNKVLQTLSSQYTSIKFPLVH---VCDICSFAKQKKLPFPDS 584
Query: 1836 YSCTSAPFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCTSTYLMSHKSQVPYLLEKF 1657
S T+ FEL+HVD+WGP ++ + YFLT+VDDYSR T +L+ K +V LL F
Sbjct: 585 TSITNFFFELIHVDIWGPLAISSIEGY-KYFLTVVDDYSRFTWIHLLKSKQEVKSLLPNF 643
Query: 1656 ILMVKNQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQRSCVYTPQQNGIVERKHRHL 1477
I++++NQ C + RSDNG EF+ T+ ++ GI+H+ SCV TPQQNGIVERKH+HL
Sbjct: 644 IILIENQHDCKLKRLRSDNGKEFI---LTNFYNAKGILHETSCVETPQQNGIVERKHQHL 700
Query: 1476 LDTARALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTPYEMLYHKAPDYSLLKPFG 1297
L+ RALLFQS++P FW +++ A ++INRLP+ LK K+P+EM+YH PD L+ FG
Sbjct: 701 LNVCRALLFQSQIPKTFWSYAIKHAVHIINRLPTRFLKQKSPFEMIYHHKPDLHDLRVFG 760
Query: 1296 CLAFATNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVTHKFLVTREAYFVESEFPTY 1117
CLA+A+ + ++K PRA KCIFLGY+ G KGY L+NL + F ++R F E+ FP Y
Sbjct: 761 CLAYASTLAAGRTKLAPRASKCIFLGYKSGTKGYVLYNLHSRFFSLSRNVIFHETVFP-Y 819
Query: 1116 T-----TDTSPPLPIPPSNDTDYF--------STXXXXXXXXXXXXXXXXXXXXXXXXLR 976
+ + S + +ND ++ T R
Sbjct: 820 SDFHKFSSNSDAILTESTNDFAHYELYPITVLETTNTHTPSEQLQQPLTEEMQDIPVQPR 879
Query: 975 KAPRHTSKPARLTDFVTYSSTTPQPTTAFPEALXXXXXXXXXXXXXXXXXXXXXXXXMQE 796
+ R +P L + YS+T+ +P E
Sbjct: 880 VSTRQKFRPNYLNQYHCYSATSSNSACLYP----LHSYLSYNKCSSNYTAFCLSISAHVE 935
Query: 795 PSSYTQASKDPGWVEAMNKELEALELNNTWVLTTLPQGKSAIGCKWVYKVKRHPDGTVER 616
PS+Y QA W +AM EL+AL N TW L +LP G+ IGCKWVY++K DG+V+R
Sbjct: 936 PSNYAQAITQDCWKQAMMTELDALNRNRTWSLVSLPPGRKLIGCKWVYRIKYKADGSVDR 995
Query: 615 LKARLVAKGYHQVYGVDYMDSFSPVAKLVTVRMLIAVATLKGWPLHQLDINNAFLHGFLD 436
KARLVAKG+ Q G+DY ++FSPVAKL TVR L+A+A+ W LHQLD++NAFLHG L+
Sbjct: 996 HKARLVAKGFTQTEGIDYFETFSPVAKLTTVRFLLALASTNNWFLHQLDVDNAFLHGDLE 1055
Query: 435 EAIYMQPPLGYKKARAGEVCLLKRSLYGLKQASRQWNTEFCSKLTAYGFLQSPHDSCLFI 256
E +YM+PP G + + VC L++SLYGLKQASR WN + S+L G+ QS D LFI
Sbjct: 1056 EEVYMRPPQGLQLPDSKLVCKLEKSLYGLKQASRNWNQKLNSELLHLGYKQSSADHSLFI 1115
Query: 255 KHTADTLLFVLIYVDDVLVTGSDIDAISHLKQYLDDLFTIKDLGVANYFLGLELARTSSG 76
K ++ +L+YVDDV+++G++ I +KQ+L F IKDLG +FLGLE+AR+ G
Sbjct: 1116 KKQGSSITILLVYVDDVVLSGNNFSEIQIVKQHLHQKFQIKDLGPLKFFLGLEVARSKKG 1175
Query: 75 TYLNQRKYVLDILSDMGLLDCK 10
LNQRKY L+++ + GLL K
Sbjct: 1176 IILNQRKYCLELIDESGLLGSK 1197
Score = 245 bits (626), Expect = 4e-62
Identities = 121/241 (50%), Positives = 162/241 (67%)
Frame = -2
Query: 4698 TPFPHGLRLIGECGVPLKDPDQYRRLVGRLLYLNLTRPDISFCVQQLSQFVNNPFSTHWD 4519
TP ++L + G L DP +RRL+GRLLYL TRPDISF VQQLSQFV+ P H
Sbjct: 1201 TPADPAIKLHADHGSLLNDPTSFRRLIGRLLYLTNTRPDISFSVQQLSQFVSQPREPHLQ 1260
Query: 4518 AALHLLRYLKGCXXXXXXXXXXXXXXXXXXSDADWATCKDTRRPITGYCVFLGECLISWK 4339
AAL ++RYLKG SD+DWATC TR+ +TGYCVFLG+ L+SWK
Sbjct: 1261 AALRIVRYLKGAPGLGLFYPAENHLRIQAFSDSDWATCSTTRKSVTGYCVFLGKSLVSWK 1320
Query: 4338 SKKQTTVSRSSAEAEYRALSTTVCEVQWITFLASDMLLSLPVPIPLYCDNQAALYIVANP 4159
SKKQ+TVSRSS+EAEYRAL++ CE+QW+ FL+ + + +P P ++ D+Q+A+ I NP
Sbjct: 1321 SKKQSTVSRSSSEAEYRALASLTCELQWLKFLSDSLFVKIPAPFSVFSDSQSAIQIAKNP 1380
Query: 4158 VFHERTKHLEIDCHLVRHQYKAGLVLPQKVASSAQLADMFTKLLASPVFSSFLSKLHMAD 3979
FHERTKH+E+DCHL+R + + L+ V S+ QLAD FTK L +F +SKL +++
Sbjct: 1381 TFHERTKHIEVDCHLIRIKLQEELLHLIHVPSANQLADAFTKSLYPKLFLHAISKLGLSN 1440
Query: 3978 L 3976
+
Sbjct: 1441 I 1441
>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1427
Score = 706 bits (1821), Expect = 0.0
Identities = 426/1191 (35%), Positives = 614/1191 (51%), Gaps = 36/1191 (3%)
Frame = -2
Query: 3468 ALGAKTKLGFINGKIKPPAEESPKFEQWQKVDFMVISWILNSISKEISEAFIYAKSAREL 3289
AL +K K F++G I+ P + + + W + + M++SWI S+S++I+++ IY +A+ L
Sbjct: 4 ALLSKNKFKFVDGSIQEPQKSNELHDAWVRCNTMILSWITKSVSEQIAQSVIYINNAQRL 63
Query: 3288 WLDIEERFGQSNGPQLYQLQREISTISQGNASVMVYFTRLKRLWDEYSNLLPTPACVC-- 3115
W D++ERF + + + L +EI +I Q + ++ YFT LK LW+E +L PTP C C
Sbjct: 64 WEDLKERFSKGDYFRFSDLLQEIHSIKQADRTISSYFTELKILWEELESLRPTPTCTCDV 123
Query: 3114 ---AGHKQTVENDKSTR-LMQFLMGLTDAYEQTRSQILLMDPLPDVNKAYSMVLRIEKQR 2947
V++ K T ++ FL GL D Y +SQIL+MDPLP +NK +S+VL+ E+Q
Sbjct: 124 RCSCDLSTKVKDYKDTEYVICFLKGLNDQYNTVKSQILIMDPLPVINKVFSLVLQQERQ- 182
Query: 2946 SVHQGLPDGLEGAAMVANTNKYMNQRPGP-WSGSKPRAQSAPMRKSKEEKAKLICKHCQA 2770
Q P+ + NT N R G R + + A +C C
Sbjct: 183 ---QNTPNLADSRIFSLNTQSGGNWRSSSNGRGGSSRGRGRTGGRGSFTNAGKVCTFCGK 239
Query: 2769 PGHEITECFKLVGYPDWFRLPKEQRGRPMANLVSAEPIQDKKDDAGVHKGIQTADLSNII 2590
H I C+ G+P F+ K++ N +S++ + + + ++ SN
Sbjct: 240 ENHTIDSCYFKHGFPPNFKF-KDKGNTTSINTISSKAPSTQASEISRKQNKEST--SNFT 296
Query: 2589 QQEFAKLMANMSTGGKDKGGMSFAHFAGYTGKDPSS-----YQCAFSTFEHLDKGSWIID 2425
+++ L+ + S T + S + EH D WI+D
Sbjct: 297 HEDYDHLIDMLKRAKLQSPEHSINQLVHQTTTESVSSSNLQQNQPGNPLEHTD---WILD 353
Query: 2424 TGASRHMCTSLSLLTNLRTISDPITVFMPDGTSKSVTHIGDVFISSDLSLTNVLFVPTFK 2245
TGA+ H+C SL T I DP+ V +P+G + + G + S L +VL++P F
Sbjct: 354 TGATDHVCNSLYFFTKYHPI-DPVHVKLPNGNTSTAQFSGTIIFSEKFFLNDVLYIPNFH 412
Query: 2244 CNLLSIAQLTQDSNCKCTFYPSHCLFQDLKTDRVMAVGQAVGKLYMLQVTSSVPSSFLQN 2065
N++S+ ++ + + F + C+ QDL + + + + + LY+LQ S N
Sbjct: 413 LNIISVQKIAASLDYELMFNKNSCIIQDLTSKKTIGLAEVKNHLYILQRPSK------DN 466
Query: 2064 SLLTTYTDDSCNTEQIDTHCNNVLTLWHKRLGHASCNTLKHLPFLHSLCTETLQHDLKN- 1888
S+ ++ N + T + LWH RLGH S L+ + L T KN
Sbjct: 467 SISACKSNSVLNAQPKGT--TSSFDLWHYRLGHPSHVVLQTVKRLFPYVTYN-----KNI 519
Query: 1887 -CEVCHISKQHRHPFPTSYSCTSAPFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCT 1711
C+ CH KQ R PFPTS + + + F+LVH+D+WGP ++ H YFLT+VDDYSR T
Sbjct: 520 TCDYCHFGKQARLPFPTSTTKSLSCFDLVHMDIWGPLAIPSIHGHK-YFLTIVDDYSRHT 578
Query: 1710 STYLMSHKSQVPYLLEKFILMVKNQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQRS 1531
Y M K + L++ FI V+ QF + RSDNG EF Q L+ +GI+HQ S
Sbjct: 579 WIYFMKSKGETRNLIQNFISYVQTQFTKHIKVLRSDNGVEFAMDQ---LYATYGIVHQTS 635
Query: 1530 CVYTPQQNGIVERKHRHLLDTARALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTP 1351
CV TPQQN +VERKHRH+L+ R LLF S +P FW +++ A +LINRLPS +L +P
Sbjct: 636 CVETPQQNSVVERKHRHILNITRTLLFHSNVPKSFWCYAVGHAIHLINRLPSPVLNNSSP 695
Query: 1350 YEMLYHKAPDYSLLKPFGCLAFATNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVTH 1171
Y+MLY K P LK FG L +A+ ++ +SK P+A K ++LG + G KG+ + +L+T
Sbjct: 696 YQMLYDKPPTLLDLKVFGSLCYASTLVQGRSKLAPKATKGVYLGVKQGTKGFLVLDLLTR 755
Query: 1170 KFLVTREAYFVESEFP----------------------TYTTDTSPPLPIPPSNDTDYFS 1057
V+R F E FP Y +S P+ ++
Sbjct: 756 SIFVSRNVVFYEHIFPFFEKGSTVITNSQQQNDACFDFLYLDSSSHPVTTIDNSSLLDID 815
Query: 1056 TXXXXXXXXXXXXXXXXXXXXXXXXLRKAPRHTSKPARLTDFVTYSSTTPQPTTAFPEAL 877
+ LRK+ RH PA L D+ P
Sbjct: 816 SAHYENDLNDIDESAHPSETSSPSQLRKSTRHKCSPAYLKDYHCNLLIGVPPPEDKHIRY 875
Query: 876 XXXXXXXXXXXXXXXXXXXXXXXXMQEPSSYTQASKDPGWVEAMNKELEALELNNTWVLT 697
EP ++ QA K+ WVEAM EL+ALE N TW +
Sbjct: 876 PLNTVLSYDSLSASYSRYVLSITTHVEPHTFNQAVKNKVWVEAMQAELDALEHNKTWTIM 935
Query: 696 TLPQGKSAIGCKWVYKVKRHPDGTVERLKARLVAKGYHQVYGVDYMDSFSPVAKLVTVRM 517
LP GK+ IG KWVYK+K DG++ER KARLV KGY Q+ G+DY D+F+PVAKL TVRM
Sbjct: 936 PLPPGKTPIGSKWVYKIKYKSDGSIERYKARLVVKGYTQIQGLDYFDTFAPVAKLSTVRM 995
Query: 516 LIAVATLKGWPLHQLDINNAFLHGFLDEAIYMQPPLGYKKARAGEVCLLKRSLYGLKQAS 337
L+A+A+ + W LHQLDINNAFLHG L E +YM+ P G + VC L +SLYGLKQAS
Sbjct: 996 LLAIASCQHWELHQLDINNAFLHGDLLEDVYMEIPQGLNIDKPNHVCKLNKSLYGLKQAS 1055
Query: 336 RQWNTEFCSKLTAYGFLQSPHDSCLFIKHTADTLLFVLIYVDDVLVTGSDIDAISHLKQY 157
RQW + S L + + QS HD LF KH +LIYVDD+++ G+D + I+H+KQ
Sbjct: 1056 RQWFAKLSSFLLSLHYKQSQHDHSLFTKHHGTHFTVILIYVDDLIIAGTDSEEINHIKQS 1115
Query: 156 LDDLFTIKDLGVANYFLGLELARTSSGTYLNQRKYVLDILSDMGLLDCKSV 4
LD F IKDLG YFLGLE+AR+ G L+QRKY LD+L + L K V
Sbjct: 1116 LDVKFKIKDLGPLRYFLGLEIARSHLGISLSQRKYTLDLLDETSFLAGKPV 1166
Score = 251 bits (640), Expect = 7e-64
Identities = 128/243 (52%), Positives = 162/243 (66%)
Frame = -2
Query: 4704 VATPFPHGLRLIGECGVPLKDPDQYRRLVGRLLYLNLTRPDISFCVQQLSQFVNNPFSTH 4525
V TP G RL P +DP YRRL+G+LLYL TRPDIS+ VQQLSQF++ P +H
Sbjct: 1166 VLTPIIKGTRLSHTTDSPYEDPAGYRRLIGKLLYLITTRPDISYSVQQLSQFLSCPQQSH 1225
Query: 4524 WDAALHLLRYLKGCXXXXXXXXXXXXXXXXXXSDADWATCKDTRRPITGYCVFLGECLIS 4345
+ AA+ +LRYLKG SD+DWA+C DTRR ++GY +FLG LIS
Sbjct: 1226 YQAAIRVLRYLKGNPGQGLFYPADSPLQLKAFSDSDWASCPDTRRSLSGYSIFLGNSLIS 1285
Query: 4344 WKSKKQTTVSRSSAEAEYRALSTTVCEVQWITFLASDMLLSLPVPIPLYCDNQAALYIVA 4165
WK KKQ+T+SRSS+EAEYRAL+ T CE+QW+T+L D + P LYCDNQ+A +I +
Sbjct: 1286 WKCKKQSTISRSSSEAEYRALAATACEIQWLTYLLQDFSVPFTTPALLYCDNQSARHIAS 1345
Query: 4164 NPVFHERTKHLEIDCHLVRHQYKAGLVLPQKVASSAQLADMFTKLLASPVFSSFLSKLHM 3985
N VFHERTKH+EIDCHLVR + +AGL +ASS QLAD+ TK L F LSKL +
Sbjct: 1346 NAVFHERTKHIEIDCHLVREKLQAGLFHLLPIASSHQLADILTKPLDPSPFQYLLSKLGV 1405
Query: 3984 ADL 3976
++
Sbjct: 1406 INI 1408
>gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1353
Score = 700 bits (1807), Expect = 0.0
Identities = 416/1179 (35%), Positives = 625/1179 (53%), Gaps = 25/1179 (2%)
Frame = -2
Query: 3471 IALGAKTKLGFINGKIKPPAEESPKFEQWQKVDFMVISWILNSISKEISEAFIYAKSARE 3292
+ LG K KL F++G + P W + + +VISWI+ S+ + + I+ +A +
Sbjct: 3 LVLGTKNKLAFVDGSLARPVTAGVDQTAWDRCNKLVISWIVQSLDTSLIPSVIWMPTASQ 62
Query: 3291 LWLDIEERFGQSNGPQLYQLQREISTISQGNASVMVYFTRLKRLWDEYSNLLPTPACVCA 3112
+W D+++R+ Q + ++ +L EI ++ QGN S+ YFT L+ LW E + P P+C C
Sbjct: 63 IWNDLKKRYYQGDAFRISELLEEIYSLKQGNMSITHYFTTLQGLWQELDHFCPIPSCTCF 122
Query: 3111 GHKQTVENDKSTRLMQFLMGLTDAYEQTRSQILLMDPLPDVNKAYSMVLRIEKQRSVHQG 2932
+TR FL GL + Y RSQ++LMDPLP V K +SM+L +++R H
Sbjct: 123 ----------TTR---FLKGLNEQYSNVRSQVMLMDPLPSVQKVFSMIL--QQEREFH-- 165
Query: 2931 LPDGLEGAAMVANTNKYMNQRPGPWSGSKPRAQSAPMRKSKEEKAKLICKHCQAPGHEIT 2752
G ++A T+ N + GSK +++K+ K +C HC GH +
Sbjct: 166 ---GTNDNQVLAVTS---NNERNNYKGSKT------FKRNKDYNTK-VCSHCGRIGHLVD 212
Query: 2751 ECFKLVGYPDWFRLPKEQRGRPMANLVSAEPIQDKKDDAGVHKGIQTADLSNIIQQEFAK 2572
C+K G P + + GR + N + +D DD VH Q+ +
Sbjct: 213 SCYKKHGPP-----LQHKHGR-IVNQYQSVSDEDTDDDQSVHS-----------QRVVSH 255
Query: 2571 LMANMSTGGKDKGGMSFAHFAGYTGKDPSSYQCAFSTFEHLDKGSWIIDTGASRHMCTSL 2392
NM T + + ++ +G P S+ + WIIDTGA+ H+C ++
Sbjct: 256 NSGNMFTPEQHQALLALLQQSGMILSFPYSH----------NSDCWIIDTGATDHVCKNI 305
Query: 2391 SLLTNLRTISDPITVFMPDGTSKSVTHIGDVFISSDLSLTNVLFVPTFKCNLLSIAQLTQ 2212
+ + R I PI + +P+G+ S G V +S LT+VLF+P F NL+S+++L +
Sbjct: 306 NFFQSYRRIK-PILIQLPNGSQVSTCVSGTVLLSKTCYLTDVLFIPNFHFNLISVSKLAK 364
Query: 2211 DSNCKCTFYPSHCLFQDLKTDRVMAVGQAVGKLYMLQVTSSVPSSFLQN--SLLTTYTDD 2038
+C TF S C Q + R++ + LY + SS S+ + + S TY D
Sbjct: 365 TLSCTLTFSDSDCQIQANHSMRMIGAAELRAGLYAM--VSSPESNVVHHCTSHFFTYQSD 422
Query: 2037 SCNTEQIDTHCNNVLTLWHKRLGHASCNTLKHLP--FLHSLCTETLQHDLKNCEVCHISK 1864
LWH RLGH S + L L + C + CE+CH++K
Sbjct: 423 ----------------LWHLRLGHLSHDKLSALKGSYPEIQCNKISLP----CEICHLAK 462
Query: 1863 QHRHPFPTSYSCTSAPFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCTSTYLMSHKS 1684
R PFP S + + F+L+HVD+WGP ++F H YFLT+VDD SR T + M +K
Sbjct: 463 HKRLPFPDSLTKSENVFDLIHVDIWGPLSVASIFGHK-YFLTIVDDKSRFTWIFFMKNKF 521
Query: 1683 QVPYLLEKFILMVKNQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQRSCVYTPQQNG 1504
+ LL+ F+ V+ QFQ + T R+DNG+EF+ + GI+HQ SCV TPQQNG
Sbjct: 522 ETKLLLQNFVSFVQTQFQQNIKTIRTDNGSEFL---LKDWYAKLGIVHQTSCVNTPQQNG 578
Query: 1503 IVERKHRHLLDTARALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTPYEMLYHKAP 1324
+VERKH+H+L ARAL+FQS + FW +++ A +LINRLP+ L+ +PY +LY + P
Sbjct: 579 VVERKHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFLQQNSPYYVLYSEKP 638
Query: 1323 DYSLLKPFGCLAFATNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVTHKFLVTREAY 1144
D+S LK FGCLAFA+ + +++K +PR+ KC+FLGY G KG+ +++L T + ++R+
Sbjct: 639 DFSHLKVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSSGTKGFIMYDLKTRETFISRDVQ 698
Query: 1143 FVESEFP-----TYTTDTSPPLPIP----------PS------NDTDYFSTXXXXXXXXX 1027
F E+ FP + + P +PI PS ++T++
Sbjct: 699 FYENIFPLQKDFSIQSTDGPVVPIAQMPLTSCDPIPSHTHDNLDETEHEHNSSTLPMTNS 758
Query: 1026 XXXXXXXXXXXXXXXLRKAPRHTSKPARLTDFVTYSSTTPQPTTAFPEALXXXXXXXXXX 847
R + R ++P L D+ + + ++
Sbjct: 759 SNSDQPNIEINIPEIRRTSQRVKNRPGYLQDYHCTLAASKVDQSSSTARYPISDYLPYTS 818
Query: 846 XXXXXXXXXXXXXXMQEPSSYTQASKDPGWVEAMNKELEALELNNTWVLTTLPQGKSAIG 667
+ EP SY A W EA+ EL+AL+ TW+LT LP K A+G
Sbjct: 819 YSAVQQSFVSTISSIIEPRSYQDAINHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVG 878
Query: 666 CKWVYKVKRHPDGTVERLKARLVAKGYHQVYGVDYMDSFSPVAKLVTVRMLIAVATLKGW 487
C+WV+KVK H DG+VER KARLVAKG+ Q+ G+DY+D+FSPV ++ T+R+ +A+A W
Sbjct: 879 CRWVFKVKYHADGSVERYKARLVAKGFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNW 938
Query: 486 PLHQLDINNAFLHGFLDEAIYMQPPLGYKKARAGEVCLLKRSLYGLKQASRQWNTEFCSK 307
+HQLDIN AFLHG L E +YM+PP G + +VC L++SLYGLKQ SRQWN +
Sbjct: 939 SVHQLDINTAFLHGDLVEEVYMKPPPGLILSSPNKVCKLQKSLYGLKQVSRQWNIKLTET 998
Query: 306 LTAYGFLQSPHDSCLFIKHTADTLLFVLIYVDDVLVTGSDIDAISHLKQYLDDLFTIKDL 127
L +GF+QS D LF K T + +L+YVDD++++GSD I +K+ LD F+IKDL
Sbjct: 999 LKLFGFVQSKSDYSLFTKRTNIGFIAILVYVDDLIISGSDETEIMKVKRLLDKQFSIKDL 1058
Query: 126 GVANYFLGLELARTSSGTYLNQRKYVLDILSDMGLLDCK 10
G +YFLGLE +R+ G + QRKY L++L D GLL K
Sbjct: 1059 GQLSYFLGLEFSRSDQGISVCQRKYALELLQDTGLLASK 1097
Score = 244 bits (623), Expect = 6e-62
Identities = 123/241 (51%), Positives = 158/241 (65%)
Frame = -2
Query: 4701 ATPFPHGLRLIGECGVPLKDPDQYRRLVGRLLYLNLTRPDISFCVQQLSQFVNNPFSTHW 4522
+TP H RL + DP YRRLVGRL+YL TRPD++F V +LSQF++ P + H+
Sbjct: 1100 STPMDHTTRLHHDPLDLYSDPSSYRRLVGRLIYLTHTRPDLAFAVGKLSQFMHQPNNAHF 1159
Query: 4521 DAALHLLRYLKGCXXXXXXXXXXXXXXXXXXSDADWATCKDTRRPITGYCVFLGECLISW 4342
AA +LRY+K +D+DWATC D+RR I+G+C FLG L+SW
Sbjct: 1160 QAARKVLRYVKATPTKGLFFPSSSDLKLTGYTDSDWATCPDSRRSISGFCFFLGNALVSW 1219
Query: 4341 KSKKQTTVSRSSAEAEYRALSTTVCEVQWITFLASDMLLSLPVPIPLYCDNQAALYIVAN 4162
KSKKQ VSRSS+EAEYRAL+ VCE QW+ L +D L +PI L+CDNQ+ALYI AN
Sbjct: 1220 KSKKQNVVSRSSSEAEYRALALGVCEAQWLHKLLTDFQLQDLIPISLFCDNQSALYIAAN 1279
Query: 4161 PVFHERTKHLEIDCHLVRHQYKAGLVLPQKVASSAQLADMFTKLLASPVFSSFLSKLHMA 3982
PVFHERTKH+EIDCH VR Q +AG + + SS QLAD+ TK L +F F+ KL ++
Sbjct: 1280 PVFHERTKHVEIDCHTVRDQVQAGFIHLAPITSSGQLADILTKPLLPKMFQDFVCKLGLS 1339
Query: 3981 D 3979
+
Sbjct: 1340 N 1340
>gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1394
Score = 694 bits (1790), Expect = 0.0
Identities = 434/1196 (36%), Positives = 632/1196 (52%), Gaps = 42/1196 (3%)
Frame = -2
Query: 3471 IALGAKTKLGFINGKIKPPAEESPKFEQWQKVDFMVISWILNSISKEISEAFIYAKSARE 3292
++L K K FI+G + P P E W++ + MV+SW+ S++ I ++ ++ +A E
Sbjct: 3 VSLETKNKEKFIDGTLSCPPITDPLHEAWRRSNRMVMSWLTRSMTPSIKQSVMWMDTALE 62
Query: 3291 LWLDIEERFGQSNGPQLYQLQREISTISQGNASVMVYFTRLKRLWDE---YSNLLP---- 3133
+W D+++RF ++ ++ LQ +I QG+ SV Y+T+LK LW E Y +L
Sbjct: 63 IWRDLKDRFSHADKFRICDLQDQILACRQGDFSVSEYYTKLKILWKELELYRCVLTCTCL 122
Query: 3132 TPACVCAGHKQTVENDKSTRLMQFLMGLTDAYEQTRSQILLMDPLPDVNKAYSMVLRIEK 2953
TP C C + + + +++FL GL ++Y Q RSQI+++DP+P + K +SMVL+ E+
Sbjct: 123 TP-CKCGLLSKLHKEREDDYVIRFLRGLNESYAQVRSQIMMLDPMPSIVKTFSMVLQHER 181
Query: 2952 Q---RSVHQGLPDGLEGAAMVANTNKYMNQRPGPWSGSKPRAQSAPMRKSKEEKAKLICK 2782
+ +PD L AAM N ++ + S +A SK K C+
Sbjct: 182 EFIGLIPKHSVPDSLAFAAMSTNQPRF--------NSSDRTNSNASKNNSKNNK---FCE 230
Query: 2781 HCQAPGHEITECFKLVGYPDWFRLPKEQRGRPMANLVSAEPIQDKKDDAGVH---KGIQT 2611
C+ H I C+ +G+P +R K N SA ++ + + H G T
Sbjct: 231 KCKKTNHTIETCYFRIGFPAGYRKNKTN------NKASASLVEVDSNASLPHLDLDGSPT 284
Query: 2610 ADLSNIIQQEFAKLMANMSTGGKDKGGMSFAHFAGYTGKDPSSYQCAFSTFEHLDKGSWI 2431
D + ++ L+A + K S + + SS F H WI
Sbjct: 285 NDQFTFSKDQYHALLALLQ---HTKAHSSLVNHSSVHNSGTSS------AFNH-----WI 330
Query: 2430 IDTGASRHMCTSLSLLTNLRTISDPITVFMPDGTSKSVTHIGDVFISSDLSLTNVLFVPT 2251
+D+GA+ H+C + SL +LR + PI + +P+ T+ G++ I DL L +VLFVP
Sbjct: 331 VDSGATDHICPTKSLFHDLRA-TKPIPIKLPNSTTVIANFSGNIHIG-DLLLADVLFVPE 388
Query: 2250 FKCNLLSIAQLTQDSNCKCTFYPSHCLFQDLKTDRVMAVGQAVGKLYMLQVTSSVP-SSF 2074
F +L+S+ +L +C F SHC F +++ + + LY L+ ++ + +
Sbjct: 389 FSVSLISVPKLVSTIDCMAVFCDSHCFFFQKSHFKMIGAARKIDGLYCLEESNDLNCTKV 448
Query: 2073 LQNSLLTTYTDDSCNTEQIDTHCNNVLTLWHKRLGHASCNTLKHLPFLHSLCTETLQHDL 1894
LQ+S++ N N LWH RLGH S + L+ L S + + +
Sbjct: 449 LQHSVINKSNISVVNAV-------NTGALWHHRLGHTSNSILQ---LLSSQYNDIIYKNC 498
Query: 1893 KNCEVCHISKQHRHPFPTSYSCTSAPFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRC 1714
C+ CH +K + PFP S +S FEL+H D+WGP H ++ H YFLTLVDD+SR
Sbjct: 499 TPCDTCHFAKHKKLPFPVCISKSSHLFELLHADIWGPLHTISIDGHK-YFLTLVDDFSRF 557
Query: 1713 TSTYLMSHKSQVPYLLEKFILMVKNQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQR 1534
T +L+ K++V +L KFI +++NQF + RSDNG EF T F + GI H+
Sbjct: 558 TWVHLLKSKAEVKTVLPKFIHLIENQFGIKLKRLRSDNGKEFF---LTDFFSSKGIFHET 614
Query: 1533 SCVYTPQQNGIVERKHRHLLDTARALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKT 1354
SC+ TPQQNGIVERKH+H+L+ ARALLFQS L FW +++ A +LINRLP+ L+ K+
Sbjct: 615 SCIETPQQNGIVERKHQHILNVARALLFQSGLSSVFWSYAIKHAVHLINRLPTPFLENKS 674
Query: 1353 PYEMLYHKAPDYSLLKPFGCLAFATNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVT 1174
PYE ++ K PD S L+ FGCLAFA I +K D RA KCIFLG++ G KGY LFNL T
Sbjct: 675 PYESVFGKIPDLSTLRVFGCLAFANTITSGITKLDKRASKCIFLGFKPGVKGYLLFNLTT 734
Query: 1173 HKFLVTR-----EAYF--------VESEFPTYTTDTSPPLP----------IPPSNDTDY 1063
FL++R E++F V + T TT + IP + +D
Sbjct: 735 KSFLLSRNVIFYESHFPYASNSPSVSNNHTTGTTASQQSFDSLIAFDIISAIPNNVTSDI 794
Query: 1062 FSTXXXXXXXXXXXXXXXXXXXXXXXXL---RKAPRHTSKPARLTDF--VTYSSTTPQPT 898
S+ R + R PA L+D+ T SS
Sbjct: 795 VSSNIDHNAVEPVLQFNDDSNDAVQIVDQPTRISTRPRKPPAYLSDYDCPTLSSANTSCC 854
Query: 897 TAFPEALXXXXXXXXXXXXXXXXXXXXXXXXMQEPSSYTQASKDPGWVEAMNKELEALEL 718
T +P EP+S+ +A K W +AM E++ALE
Sbjct: 855 TPYP----LHSYLSYSNCSDSHTAFCMSLSATIEPTSFKEACKHDHWQQAMLAEIQALER 910
Query: 717 NNTWVLTTLPQGKSAIGCKWVYKVKRHPDGTVERLKARLVAKGYHQVYGVDYMDSFSPVA 538
N TW L LP K +GCKWVYK K + DG++ER KARLVAKG+ Q G+D+ ++FSPV
Sbjct: 911 NKTWSLVRLPPKKRVVGCKWVYKTKLNADGSIERHKARLVAKGFTQTEGMDFFETFSPVV 970
Query: 537 KLVTVRMLIAVATLKGWPLHQLDINNAFLHGFLDEAIYMQPPLGYKKARAGEVCLLKRSL 358
KL TVR L++VA W LHQLD++NAFLHG LD +YM+PP G VC L +SL
Sbjct: 971 KLTTVRFLLSVAVSHNWFLHQLDVDNAFLHGDLDVEVYMKPPPGLILPEPHLVCKLHKSL 1030
Query: 357 YGLKQASRQWNTEFCSKLTAYGFLQSPHDSCLFIKHTADTLLFVLIYVDDVLVTGSDIDA 178
YGL+QASRQ N++ S L +YGF QSP D LFI+H++ + +L+YVDD+++TG I
Sbjct: 1031 YGLRQASRQGNSKLTSALISYGFSQSPADHSLFIRHSSTSFTALLVYVDDIVLTGDSIQD 1090
Query: 177 ISHLKQYLDDLFTIKDLGVANYFLGLELARTSSGTYLNQRKYVLDILSDMGLLDCK 10
I +K++L F IKDLG FLG ++AR+ G LNQRKY LDIL++ G CK
Sbjct: 1091 IVAVKKFLHHEFRIKDLGNLKLFLGFDVARSQQGLILNQRKYCLDILAEFGFTGCK 1146
Score = 251 bits (641), Expect = 5e-64
Identities = 121/235 (51%), Positives = 162/235 (68%)
Frame = -2
Query: 4680 LRLIGECGVPLKDPDQYRRLVGRLLYLNLTRPDISFCVQQLSQFVNNPFSTHWDAALHLL 4501
++L + G ++DP YRRL+G+L YL TRPDISF VQQ+SQF++ P +H +AA +L
Sbjct: 1156 VKLKDDEGDLVQDPTAYRRLIGKLQYLTNTRPDISFAVQQVSQFMSKPRYSHLNAAFRIL 1215
Query: 4500 RYLKGCXXXXXXXXXXXXXXXXXXSDADWATCKDTRRPITGYCVFLGECLISWKSKKQTT 4321
+YLKGC SD+DWATC TR+ TGYCVF G CLISWKSKKQ+T
Sbjct: 1216 KYLKGCPGLGLFYPSANPHRIQAFSDSDWATCCITRKSTTGYCVFYGNCLISWKSKKQST 1275
Query: 4320 VSRSSAEAEYRALSTTVCEVQWITFLASDMLLSLPVPIPLYCDNQAALYIVANPVFHERT 4141
VSRSS EAEYRAL++ CE+QW+ ++A D+ L +P+P P +CDNQ+A+ + NP FHERT
Sbjct: 1276 VSRSSTEAEYRALASVACELQWLKYVADDLCLQIPLPFPTFCDNQSAIQLAKNPSFHERT 1335
Query: 4140 KHLEIDCHLVRHQYKAGLVLPQKVASSAQLADMFTKLLASPVFSSFLSKLHMADL 3976
KH+E+DCHL+R + GL++ V S QLADMFTK L F+ LSK+ + ++
Sbjct: 1336 KHIEVDCHLIRAKILDGLIVLSHVPSKHQLADMFTKSLYPGPFNVNLSKMGLLNI 1390
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 684 bits (1765), Expect = 0.0
Identities = 424/1224 (34%), Positives = 628/1224 (51%), Gaps = 35/1224 (2%)
Frame = -2
Query: 3567 PLLLHGSDHPGMMLVSSPLTGANYLSWKRSISIALGAKTKLGFINGKIKPPAEESPKFEQ 3388
P LH +DHPG+ ++S L NY W ++ I+L AK K GFI+G + P E F
Sbjct: 61 PFFLHSADHPGLNIISHRLDETNYGDWSVAMLISLDAKNKTGFIDGTLSRPLESDLNFRL 120
Query: 3387 WQKVDFMVISWILNSISKEISEAFIYAKSARELWLDIEERFGQSNGPQLYQLQREISTIS 3208
W + + MV SW+LNS+S +I + + A ++W D+ RF +N P+ Y L +EI
Sbjct: 121 WSRCNSMVKSWLLNSVSPQIYRSILRMNDASDIWRDLNSRFNVTNLPRTYNLTQEIQDFR 180
Query: 3207 QGNASVMVYFTRLKRLWDEYSNL--LPTPACVCAGHKQTVENDKSTRLMQFLMGLTDAYE 3034
QG S+ Y+TRLK LWD+ + L P C C + + + ++++FL GL ++Y
Sbjct: 181 QGTLSLSEYYTRLKTLWDQLDSTEALDEP-CTCGKAMRLQQKAEQAKIVKFLAGLNESYA 239
Query: 3033 QTRSQILLMDPLPDVNKAYSMVLRIEKQRSVHQGLPDGLEGAAMVANTNKYMNQRPGPWS 2854
R QI+ LP + + Y ++ + Q+S + A V+ + + P
Sbjct: 240 IVRRQIIAKKALPSLGEVYHILDQDNSQQSFSNVVAP--PAAFQVSEITQSPSMDP---- 293
Query: 2853 GSKPRAQSAPMRKSKEEKAKLICKHCQAPGHEITECFKLVGYPDWFRLPKEQRGRPM--- 2683
+ Q+ P K + IC GH C+K G+P F PK + G +
Sbjct: 294 -TVCYVQNGP------NKGRPICSFYNRVGHIAERCYKKHGFPPGFT-PKGKAGEKLQKP 345
Query: 2682 ----ANLVSAEPIQDKKDDAGVHKGIQT-----ADLSNIIQQEFAKLMANMSTGGKDKGG 2530
AN+ + + + + + A S+ +Q A ST D G
Sbjct: 346 KPLAANVAESSEVNTSLESMVGNLSKEQLQQFIAMFSSQLQNTPPSTYATASTSQSDNLG 405
Query: 2529 MSFAHFAGYTGKDPSSYQCA--FSTFEH-LDKGSWIIDTGASRHMCTSLSLLTNLRTISD 2359
+ F+ PS+Y + H L +W+ID+GA+ H+ SL ++L T S
Sbjct: 406 ICFS---------PSTYSFIGILTVARHTLSSATWVIDSGATHHVSHDRSLFSSLDT-SV 455
Query: 2358 PITVFMPDGTSKSVTHIGDVFISSDLSLTNVLFVPTFKCNLLSIAQLTQDSNCKCTFYPS 2179
V +P G + ++ +G + ++ D+ L NVLF+P F+ NL+SI+ LT D + F +
Sbjct: 456 LSAVNLPTGPTVKISGVGTLKLNDDILLKNVLFIPEFRLNLISISSLTDDIGSRVIFDKN 515
Query: 2178 HCLFQDLKTDRVMAVGQAVGKLYMLQVTSSVPSSFLQNSLLTTYTDDSCNTEQIDTHCNN 1999
C QDL R++ G+ V LY+L V + I +
Sbjct: 516 SCEIQDLIKGRMLGQGRRVANLYLLDV----------------------GDQSISVNAVV 553
Query: 1998 VLTLWHKRLGHASCNTLKHLPFLHSLCTETLQHDLKN---CEVCHISKQHRHPFPTSYSC 1828
+++WH+RLGHAS L + S T +H K C VCH++KQ + FPTS
Sbjct: 554 DISMWHRRLGHASLQRLDAI----SDSLGTTRHKNKGSDFCHVCHLAKQRKLSFPTSNKV 609
Query: 1827 TSAPFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCTSTYLMSHKSQVPYLLEKFILM 1648
F+L+H+DVWGPF T+ + YFLT+VDD+SR T YL+ KS+V + FI
Sbjct: 610 CKEIFDLLHIDVWGPFSVETVEGYK-YFLTIVDDHSRATWMYLLKTKSEVLTVFPAFIQQ 668
Query: 1647 VKNQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQRSCVYTPQQNGIVERKHRHLLDT 1468
V+NQ++ V RSDN E + TS + GI+ SC TP+QN +VERKH+H+L+
Sbjct: 669 VENQYKVKVKAVRSDNAPEL---KFTSFYAEKGIVSFHSCPETPEQNSVVERKHQHILNV 725
Query: 1467 ARALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTPYEMLYHKAPDYSLLKPFGCLA 1288
ARAL+FQS++P+ W +LTA +LINR PS LL KTPYE+L AP Y L+ FGCL
Sbjct: 726 ARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVYEQLRTFGCLC 785
Query: 1287 FATNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVTHKFLVTREAYFVESEFPTYTTD 1108
+++ + KF PR+ C+FLGY G KGYKL +L ++ ++R F E FP
Sbjct: 786 YSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHEEVFPLAKNP 845
Query: 1107 TS--------PPLPIPPS--NDTDYFSTXXXXXXXXXXXXXXXXXXXXXXXXLRKAPRHT 958
S P +P+ +DT + + + R
Sbjct: 846 GSESSLKLFTPMVPVSSGIISDTTHSPSSLPSQISDLPPQI-------------SSQRVR 892
Query: 957 SKPARLTDFVTYSSTTPQPTTAFPEALXXXXXXXXXXXXXXXXXXXXXXXXMQEPSSYTQ 778
PA L D Y T Q +P + P++Y +
Sbjct: 893 KPPAHLND---YHCNTMQSDHKYPISSTISYSKISPSHMCYINNITKIPI----PTNYAE 945
Query: 777 ASKDPGWVEAMNKELEALELNNTWVLTTLPQGKSAIGCKWVYKVKRHPDGTVERLKARLV 598
A W EA++ E+ A+E NTW +TTLP+GK A+GCKWV+ +K DG +ER KARLV
Sbjct: 946 AQDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLV 1005
Query: 597 AKGYHQVYGVDYMDSFSPVAKLVTVRMLIAVATLKGWPLHQLDINNAFLHGFLDEAIYMQ 418
AKGY Q G+DY D+FSPVAK+ T+++L+ V+ K W L QLD++NAFL+G L+E I+M+
Sbjct: 1006 AKGYTQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIFMK 1065
Query: 417 PPLGYKKAR-----AGEVCLLKRSLYGLKQASRQWNTEFCSKLTAYGFLQSPHDSCLFIK 253
P GY + + + V LKRS+YGLKQASRQW +F S L + GF ++ D LF+K
Sbjct: 1066 IPEGYAERKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFLK 1125
Query: 252 HTADTLLFVLIYVDDVLVTGSDIDAISHLKQYLDDLFTIKDLGVANYFLGLELARTSSGT 73
+ VL+YVDD+++ + A + L + LD F ++DLG YFLGLE+ART++G
Sbjct: 1126 MYDGEFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTAGI 1185
Query: 72 YLNQRKYVLDILSDMGLLDCKSVA 1
+ QRKY L++L G+L CK V+
Sbjct: 1186 SICQRKYALELLQSTGMLACKPVS 1209
Score = 207 bits (528), Expect = 2e-50
Identities = 108/243 (44%), Positives = 154/243 (63%)
Frame = -2
Query: 4704 VATPFPHGLRLIGECGVPLKDPDQYRRLVGRLLYLNLTRPDISFCVQQLSQFVNNPFSTH 4525
V+ P L++ + G ++D +QYRR+VG+L+YL +TRPDI+F V +L QF + P +TH
Sbjct: 1208 VSVPMIPNLKMRKDDGDLIEDIEQYRRIVGKLMYLTITRPDITFAVNKLCQFSSAPRTTH 1267
Query: 4524 WDAALHLLRYLKGCXXXXXXXXXXXXXXXXXXSDADWATCKDTRRPITGYCVFLGECLIS 4345
AA +L+Y+KG +D+DWA+C+D+RR T + +F+G+ LIS
Sbjct: 1268 LTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSDWASCQDSRRSTTSFTMFVGDSLIS 1327
Query: 4344 WKSKKQTTVSRSSAEAEYRALSTTVCEVQWITFLASDMLLSLPVPIPLYCDNQAALYIVA 4165
W+SKKQ TVSRSSAEAEYRAL+ CE+ W+ L + S PVPI LY D+ AA+YI
Sbjct: 1328 WRSKKQHTVSRSSAEAEYRALALATCEMVWLFTLLVSLQASPPVPI-LYSDSTAAIYIAT 1386
Query: 4164 NPVFHERTKHLEIDCHLVRHQYKAGLVLPQKVASSAQLADMFTKLLASPVFSSFLSKLHM 3985
NPVFHERTKH+++DCH VR + G + V + Q+AD+ TK L F SK+ +
Sbjct: 1387 NPVFHERTKHIKLDCHTVRERLDNGELKLLHVRTEDQVADILTKPLFPYQFEHLKSKMSI 1446
Query: 3984 ADL 3976
++
Sbjct: 1447 LNI 1449
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 681 bits (1756), Expect = 0.0
Identities = 420/1216 (34%), Positives = 620/1216 (50%), Gaps = 30/1216 (2%)
Frame = -2
Query: 3567 PLLLHGSDHPGMMLVSSPLTGANYLSWKRSISIALGAKTKLGFINGKIKPPAEESPKFEQ 3388
P LH +DHPG+ ++S L Y W ++ I+L AK KLGF++G + P E P F
Sbjct: 65 PFFLHSADHPGLSIISHRLDETTYGDWSVAMRISLDAKNKLGFVDGSLPRPLESDPNFRL 124
Query: 3387 WQKVDFMVISWILNSISKEISEAFIYAKSARELWLDIEERFGQSNGPQLYQLQREISTIS 3208
W + + MV SW+LNS+S +I + + A ++W D+ +RF +N P+ Y L +EI +
Sbjct: 125 WSRCNSMVKSWLLNSVSPQIYRSILRLNDATDIWRDLFDRFNLTNLPRTYNLTQEIQDLR 184
Query: 3207 QGNASVMVYFTRLKRLWDEYSNL--LPTPACVCAGHKQTVENDKSTRLMQFLMGLTDAYE 3034
QG S+ Y+T LK LWD+ + L P C C + + + ++M+FL GL ++Y
Sbjct: 185 QGTMSLSEYYTLLKTLWDQLDSTEALDDP-CTCGKAVRLYQKAEKAKIMKFLAGLNESYA 243
Query: 3033 QTRSQILLMDPLPDVNKAYSMVLRIEKQRSVHQGLPDGLEGAAMVANTNKYMNQRPGPWS 2854
R QI+ LP + + Y ++ + Q+ + A V+ + P
Sbjct: 244 IVRRQIIAKKALPSLAEVYHILDQDNSQKGFFNVVAP--PAAFQVSEVSHSPITSP---- 297
Query: 2853 GSKPRAQSAPMRKSKEEKAKLICKHCQAPGHEITECFKLVGYPDWF--------RLPKEQ 2698
QS P K + C C GH C+K G+P F + PK Q
Sbjct: 298 -EIMYVQSGP------NKGRPTCSFCNRVGHIAERCYKKHGFPPGFTPKGKSSDKPPKPQ 350
Query: 2697 RGRPMANLVSAEPIQDKKDDAGVHKGIQTADLSNIIQQEFAKLMANMSTGGKDKGGMSFA 2518
L + + AG Q +L + + + + T S
Sbjct: 351 AVAAQVTLSPDKMTGQLETLAGNFSPDQIQNLIALFSSQLQPQIVSPQTASSQHEASSSQ 410
Query: 2517 HFAGYTGKDPSSYQCAFSTF----------EHLDKGSWIIDTGASRHMCTSLSLLTNLRT 2368
A PS + ST+ L +W+ID+GA+ H+ L L T
Sbjct: 411 SVA------PSGILFSPSTYCFIGILAVSHNSLSSDTWVIDSGATHHVSHDRKLFQTLDT 464
Query: 2367 ISDPITVFMPDGTSKSVTHIGDVFISSDLSLTNVLFVPTFKCNLLSIAQLTQDSNCKCTF 2188
S V +P G + ++ +G V I+ D+ L NVLF+P F+ NL+SI+ LT D + F
Sbjct: 465 -SIVSFVNLPTGPNVRISGVGTVLINKDIILQNVLFIPEFRLNLISISSLTTDLGTRVIF 523
Query: 2187 YPSHCLFQDLKTDRVMAVGQAVGKLYMLQVTSSVPSSFLQNSLLTTYTDDSCNTEQIDTH 2008
PS C QDL + G+ +G LY+L S S N+++
Sbjct: 524 DPSCCQIQDLTKGLTLGEGKRIGNLYVLDTQSPAISV---NAVVD--------------- 565
Query: 2007 CNNVLTLWHKRLGHASCNTLKHLPFLHSLCTETLQHDLKN---CEVCHISKQHRHPFPTS 1837
+++WHKRLGH S + L L S T +H K C VCH++KQ + FP++
Sbjct: 566 ----VSVWHKRLGHPSFSRLDSL----SEVLGTTRHKNKKSAYCHVCHLAKQKKLSFPSA 617
Query: 1836 YSCTSAPFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCTSTYLMSHKSQVPYLLEKF 1657
+ ++ FEL+H+DVWGPF T+ + YFLT+VDD+SR T YL+ KS V + F
Sbjct: 618 NNICNSTFELLHIDVWGPFSVETVEGYK-YFLTIVDDHSRATWIYLLKSKSDVLTVFPAF 676
Query: 1656 ILMVKNQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQRSCVYTPQQNGIVERKHRHL 1477
I +V+NQ+ V + RSDN E T+ + GI+ SC TP+QN +VERKH+H+
Sbjct: 677 IDLVENQYDTRVKSVRSDNAKELAFTE---FYKAKGIVSFHSCPETPEQNSVVERKHQHI 733
Query: 1476 LDTARALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTPYEMLYHKAPDYSLLKPFG 1297
L+ ARAL+FQS + + +W +LTA +LINR PS+LL KTP+E+L K PDYS LK FG
Sbjct: 734 LNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLPDYSQLKTFG 793
Query: 1296 CLAFATNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVTHKFLVTREAYFVESEFPTY 1117
CL +++ + KF PR+ C+FLGY G KGYKL +L ++ ++R F E FP
Sbjct: 794 CLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISRNVEFHEELFPLA 853
Query: 1116 TTDTSPPLPIPPSNDTDYFSTXXXXXXXXXXXXXXXXXXXXXXXXLRKAPRHTSKPARLT 937
++ S + +D F+ + K R T PA L
Sbjct: 854 SSQQS------ATTASDVFTPMDPLSSGNSITSHLPSPQISPSTQISKR-RITKFPAHLQ 906
Query: 936 DFVTY--SSTTPQPTTAFPEALXXXXXXXXXXXXXXXXXXXXXXXXMQEPSSYTQASKDP 763
D+ Y + P ++ + P SY +A
Sbjct: 907 DYHCYFVNKDDSHPISS---------SLSYSQISPSHMLYINNISKIPIPQSYHEAKDSK 957
Query: 762 GWVEAMNKELEALELNNTWVLTTLPQGKSAIGCKWVYKVKRHPDGTVERLKARLVAKGYH 583
W A+++E+ A+E +TW +T+LP GK A+GCKWV+ VK H DG++ER KAR+VAKGY
Sbjct: 958 EWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVKFHADGSLERFKARIVAKGYT 1017
Query: 582 QVYGVDYMDSFSPVAKLVTVRMLIAVATLKGWPLHQLDINNAFLHGFLDEAIYMQPPLGY 403
Q G+DY ++FSPVAK+ TV++L+ V+ K W L+QLDI+NAFL+G L+E IYM+ P GY
Sbjct: 1018 QKEGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLDISNAFLNGDLEETIYMKLPDGY 1077
Query: 402 KKARA-----GEVCLLKRSLYGLKQASRQWNTEFCSKLTAYGFLQSPHDSCLFIKHTADT 238
+ VC LK+S+YGLKQASRQW +F + L A GF + D LF++
Sbjct: 1078 ADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLALGFEKQHGDHTLFVRCIGSE 1137
Query: 237 LLFVLIYVDDVLVTGSDIDAISHLKQYLDDLFTIKDLGVANYFLGLELARTSSGTYLNQR 58
+ +L+YVDD+++ + A L + L F +++LG YFLGLE+ARTS G L+QR
Sbjct: 1138 FIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKYFLGLEVARTSEGISLSQR 1197
Query: 57 KYVLDILSDMGLLDCK 10
KY L++L+ +LDCK
Sbjct: 1198 KYALELLTSADMLDCK 1213
Score = 208 bits (529), Expect = 1e-50
Identities = 110/240 (45%), Positives = 149/240 (62%)
Frame = -2
Query: 4695 PFPHGLRLIGECGVPLKDPDQYRRLVGRLLYLNLTRPDISFCVQQLSQFVNNPFSTHWDA 4516
P +RL G+ L+D + YRRLVG+L+YL +TRPDI+F V +L QF + P + H A
Sbjct: 1218 PMTPNIRLSKNDGLLLEDKEMYRRLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAA 1277
Query: 4515 ALHLLRYLKGCXXXXXXXXXXXXXXXXXXSDADWATCKDTRRPITGYCVFLGECLISWKS 4336
+L+Y+KG +DADW TC D+RR TG+ +F+G LISW+S
Sbjct: 1278 VYKVLQYIKGTVGQGLFYSAEDDLTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRS 1337
Query: 4335 KKQTTVSRSSAEAEYRALSTTVCEVQWITFLASDMLLSLPVPIPLYCDNQAALYIVANPV 4156
KKQ TVSRSSAEAEYRAL+ CE+ W++ L + + VPI LY D+ AA+YI NPV
Sbjct: 1338 KKQPTVSRSSAEAEYRALALASCEMAWLSTLLLALRVHSGVPI-LYSDSTAAVYIATNPV 1396
Query: 4155 FHERTKHLEIDCHLVRHQYKAGLVLPQKVASSAQLADMFTKLLASPVFSSFLSKLHMADL 3976
FHERTKH+EIDCH VR + G + V + Q+AD+ TK L F+ LSK+ + ++
Sbjct: 1397 FHERTKHIEIDCHTVREKLDNGQLKLLHVKTKDQVADILTKPLFPYQFAHLLSKMSIQNI 1456
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 655 bits (1690), Expect = 0.0
Identities = 411/1239 (33%), Positives = 622/1239 (50%), Gaps = 38/1239 (3%)
Frame = -2
Query: 3612 QNHEFAHQTVTKEDEPLLLHGSDHPGMMLVSSPLTGANYLSWKRSISIALGAKTKLGFIN 3433
Q++ + ++ P LH SDHPG+ +VS L G NY +W ++ ++L AK KL F++
Sbjct: 52 QSNSASIESYDNAHSPYFLHSSDHPGLNIVSHILDGTNYNNWSIAMRMSLDAKNKLSFVD 111
Query: 3432 GKIKPPAEESPKFEQWQKVDFMVISWILNSISKEISEAFIYAKSARELWLDIEERFGQSN 3253
G + P F+ W + + MV +W+LN ++ E+W D+ RF SN
Sbjct: 112 GSLPRPDVSDRMFKIWSRCNSMVKTWLLNVVT--------------EMWNDLFSRFRVSN 157
Query: 3252 GPQLYQLQREISTISQGNASVMVYFTRLKRLWDEYSN--LLPTPACVCAGHKQTVENDKS 3079
P+ YQL++ I T+ QGN + Y+T+ K LW++ +N +L C C K+ +E ++
Sbjct: 158 LPRKYQLEQSIHTLKQGNLDLSTYYTKKKTLWEQLANTRVLTVRKCNCEHVKELLEEAET 217
Query: 3078 TRLMQFLMGLTDAYEQTRSQILLMDPLPDVNKAYSMVLRIEKQRSVHQGLPDGLEGAAMV 2899
+R++QFLMGL D + R QIL M P P + + Y+M+ + E QR V G +
Sbjct: 218 SRIIQFLMGLNDNFAHIRGQILNMKPRPGLTEIYNMLDQDESQRLV---------GNPTL 268
Query: 2898 ANTNKYMNQRPGPWSGSKPRAQSAPMRKSKEEKAKLICKHCQAPGHEITECFKLVGYPDW 2719
+N + P S+ +K K C +C GH + +C+K GYP
Sbjct: 269 SNPTAAFQVQASPIIDSQVNMAQGSYKKPK-------CSYCNKLGHLVDKCYKKHGYPPG 321
Query: 2718 FRLPKEQR-GRPMANLVSAEPIQDKKDD-AGVHKGIQTADLSNIIQQEFAKL-MANMS-- 2554
+ K Q G +P+ + ++ ++ T + +I KL +A+ S
Sbjct: 322 SKWTKGQTIGSTNLASTQLQPVNETPNEKTDSYEEFSTDQIQTMISYLSTKLHIASASPM 381
Query: 2553 ---TGGKDKGGMSFAHFAGYTGKDPSSYQCAF--------STFEHLDKGSWIIDTGASRH 2407
+ S + +G S + A+ S + W+ID+GA+ H
Sbjct: 382 PTTSSASISASPSVPMISQISGTFLSLFSNAYYDMLISSVSQEPAVSPRGWVIDSGATHH 441
Query: 2406 MCTSLSLLTNLRTISDPITVFMPDGTSKSVTHIGDVFISSDLSLTNVLFVPTFKCNLLSI 2227
+ + L N R++ + V +P+ + + IG + +S +SL NVL++P FK NL+S
Sbjct: 442 VTHNRDLYLNFRSLENTF-VRLPNDCTVKIAGIGFIQLSDAISLHNVLYIPEFKFNLIS- 499
Query: 2226 AQLTQDSNCKCTFYPSHCLFQDLKTDRVMAVGQAVGKLYMLQVTSSVPSSFLQNSLLTTY 2047
+L + ++ G VG LY+L + + L+ +
Sbjct: 500 ---------------------ELTKELMIGRGSQVGNLYVLDFNENNHTVSLKGTTSMCP 538
Query: 2046 TDDSCNTEQIDTHCNNVLTLWHKRLGHASCNTLKHLPFLHSLCTETLQHDLKN----CEV 1879
C++ +D+ WHKRLGH + + + L + +L + + + C V
Sbjct: 539 EFSVCSSVVVDS------VTWHKRLGHPAYSKIDLLSDVLNLKVKKINKEHSPVCHVCHV 592
Query: 1878 CHISKQHRHPFPTSYSCTSAPFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCTSTYL 1699
CH+SKQ F + + SA F+LVH+D WGPF T + T YL
Sbjct: 593 CHLSKQKHLSFQSRQNMCSAAFDLVHIDTWGPFSVPT---------------NDATWIYL 637
Query: 1698 MSHKSQVPYLLEKFILMVKNQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQRSCVYT 1519
+ +KS V ++ FI MV Q+Q + + RSDN E + T LF HGI+ SC T
Sbjct: 638 LKNKSDVLHVFPAFINMVHTQYQTKLKSVRSDNAHEL---KFTDLFAAHGIVAYHSCPET 694
Query: 1518 PQQNGIVERKHRHLLDTARALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTPYEML 1339
P+QN +VERKH+H+L+ ARALLFQS +P++FW +LTA +LINRLP+ +L K+PYE L
Sbjct: 695 PEQNSVVERKHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNKSPYEKL 754
Query: 1338 YHKAPDYSLLKPFGCLAFATNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVTHKFLV 1159
+ P Y LK FGCL +++ + KF+PRA C+FLGY +G KGYKL ++ TH +
Sbjct: 755 KNIPPAYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVSI 814
Query: 1158 TREAYFVESEFPTYTT-------DTSPPLPIPPSND---TDYFSTXXXXXXXXXXXXXXX 1009
+R F E FP ++ D P L P D + S
Sbjct: 815 SRHVIFHEDIFPFISSTIKDDIKDFFPLLQFPARTDDLPLEQTSIIDTHPHQDVSSSKAL 874
Query: 1008 XXXXXXXXXLRKAPRHTSKPARLTDFVTYSSTTPQPTTAFPEALXXXXXXXXXXXXXXXX 829
+K P+H L DF Y++TT +P AF +
Sbjct: 875 VPFDPLSKRQKKPPKH------LQDFHCYNNTT-EPFHAFINNITNAVI----------- 916
Query: 828 XXXXXXXXMQEPSSYTQASKDPGWVEAMNKELEALELNNTWVLTTLPQGKSAIGCKWVYK 649
P Y++A W +AM +E+ A+ NTW + +LP K AIGCKWV+
Sbjct: 917 -----------PQRYSEAKDFKAWCDAMKEEIGAMVRTNTWSVVSLPPNKKAIGCKWVFT 965
Query: 648 VKRHPDGTVERLKARLVAKGYHQVYGVDYMDSFSPVAKLVTVRMLIAVATLKGWPLHQLD 469
+K + DG++ER KARLVAKGY Q G+DY ++FSPVAKL +VRM++ +A W +HQLD
Sbjct: 966 IKHNADGSIERYKARLVAKGYTQEEGLDYEETFSPVAKLTSVRMMLLLAAKMKWSVHQLD 1025
Query: 468 INNAFLHGFLDEAIYMQPPLGYKKARAGE------VCLLKRSLYGLKQASRQWNTEFCSK 307
I+NAFL+G LDE IYM+ P GY GE +C L +S+YGLKQASRQW + +
Sbjct: 1026 ISNAFLNGDLDEEIYMKIPPGYADL-VGEALPPHAICRLHKSIYGLKQASRQWYLKLSNT 1084
Query: 306 LTAYGFLQSPHDSCLFIKHTADTLLFVLIYVDDVLVTGSDIDAISHLKQYLDDLFTIKDL 127
L GF +S D LFIK+ L+ VL+YVDD+++ + DA++ L F ++DL
Sbjct: 1085 LKGMGFQKSNADHTLFIKYANGVLMGVLVYVDDIMIVSNSDDAVAQFTAELKSYFKLRDL 1144
Query: 126 GVANYFLGLELARTSSGTYLNQRKYVLDILSDMGLLDCK 10
G A YFLG+E+AR+ G + QRKY+L++LS G L K
Sbjct: 1145 GAAKYFLGIEIARSEKGISICQRKYILELLSTTGFLGSK 1183
Score = 194 bits (494), Expect = 2e-46
Identities = 100/240 (41%), Positives = 142/240 (59%)
Frame = -2
Query: 4695 PFPHGLRLIGECGVPLKDPDQYRRLVGRLLYLNLTRPDISFCVQQLSQFVNNPFSTHWDA 4516
P ++L E GVPL D YR+LVG+L+YL +TRPDI++ V L QF + P S H A
Sbjct: 1188 PLDPSVKLNKEDGVPLTDSTSYRKLVGKLMYLQITRPDIAYAVNTLCQFSHAPTSVHLSA 1247
Query: 4515 ALHLLRYLKGCXXXXXXXXXXXXXXXXXXSDADWATCKDTRRPITGYCVFLGECLISWKS 4336
+LRYLKG +D+D+ +C D+RR + YC+F+G+ L+SWKS
Sbjct: 1248 VHKVLRYLKGTVGQGLFYSADDKFDLRGYTDSDFGSCTDSRRCVAAYCMFIGDYLVSWKS 1307
Query: 4335 KKQTTVSRSSAEAEYRALSTTVCEVQWITFLASDMLLSLPVPIPLYCDNQAALYIVANPV 4156
KKQ TVS S+AEAE+RA+S E+ W++ L D + P LYCDN AAL+IV N V
Sbjct: 1308 KKQDTVSMSTAEAEFRAMSQGTKEMIWLSRLFDDFKVPFIPPAYLYCDNTAALHIVNNSV 1367
Query: 4155 FHERTKHLEIDCHLVRHQYKAGLVLPQKVASSAQLADMFTKLLASPVFSSFLSKLHMADL 3976
FHERTK +E+DC+ R ++G + V + Q+AD TK + F + K+ + ++
Sbjct: 1368 FHERTKFVELDCYKTREAVESGFLKTMFVETGEQVADPLTKAIHPAQFHKLIGKMGVCNI 1427
>ref|XP_015168851.1| PREDICTED: uncharacterized protein LOC107062574 [Solanum tuberosum]
Length = 1100
Score = 638 bits (1646), Expect = 0.0
Identities = 406/1112 (36%), Positives = 564/1112 (50%), Gaps = 79/1112 (7%)
Frame = -2
Query: 3648 GDEDSGDTPGGLQNHEFAHQTVTKEDEPLLLHGSDHPGMMLVSSPLTGANYLSWKRSISI 3469
G+ GG Q +T T + P LH SD PGM L++S G + W+RSI I
Sbjct: 3 GESTVTQASGGSQTIAGNGETFTS-NHPYHLHNSDSPGMSLINSTFDGKGFPGWRRSILI 61
Query: 3468 ALGAKTKLGFINGKIKPPAEESPKFEQWQKVDFMVISWILNSISKEISEAFIYAKSAREL 3289
AL AK KLGFING + P + +EQW + MV+SW+LNS+SKEI+++ IY+K+A+EL
Sbjct: 62 ALSAKKKLGFINGACRAPVLTAVDYEQWSCCNDMVMSWLLNSLSKEIADSVIYSKTAKEL 121
Query: 3288 WLDIEERFGQSNGPQLYQLQREISTISQGNASVMVYFTRLKRLWDEYS--NLLPTPACVC 3115
W +E+RFG+SNG +LY LQ+E+S + Q N V YFT+LKRLWDE NLL CVC
Sbjct: 122 WDSLEQRFGRSNGAKLYHLQKELSCLVQENNDVAGYFTKLKRLWDELDSLNLLTCCICVC 181
Query: 3114 A--GHKQTVENDKSTRLMQFLMGLTDAYEQTRSQILLMDPLPDVNKAYSMVLRIEKQRSV 2941
G + + + RL+QFLMGL D Y Q R IL+M PLP ++ AY+++L+ E R
Sbjct: 182 TCEGKGKLTKALEDQRLIQFLMGLNDLYAQARGTILMMTPLPTIDSAYALLLQDENHREG 241
Query: 2940 HQGLPDGLEGAAMVAN--------TNKYMN----------QRPGPWSGSKPRAQSAPMRK 2815
P A+ +A TN N QR G +S ++ +SA K
Sbjct: 242 IVHPPFSPAAASFMATGQGRGNYKTNNQTNNQTFRGGQTGQRFG-YSSTQKSGKSAQRFK 300
Query: 2814 SKEEK--AKLICKHCQAPGHEITECFKLVGYPDWFRLPKEQ------RGRPMANLVSAEP 2659
++ K + C +C GH +C +L+GYPD F K + +G + AE
Sbjct: 301 PRKTKYNPNVSCTYCGKTGHVHDDCHRLIGYPDDFEFTKSRNFEGTVKGNAVIPKEEAED 360
Query: 2658 IQDKKDDAGVHKGIQ---TADLSNIIQQEFAKLMANM--STGGKDKGGMSFAHFAGYTGK 2494
+ + D G + Q SN++QQ + N S+G Y+G
Sbjct: 361 VIAQYGDTGNNNYAQYLSKEQYSNLVQQVKKDMHINQASSSGSTINAKAIAGTILKYSG- 419
Query: 2493 DPSSYQCAFSTFEHLDKGSWIIDTGASRHMCTSLSLLTNLRTISDPITVFMPDGTSKSVT 2314
S F + WIID+GAS HMC + +L + P+ + +P+ +VT
Sbjct: 420 ---------SCFTVYNSNVWIIDSGASEHMCFNSKSFMSLTPLPIPLNISLPNSFRITVT 470
Query: 2313 HIGDVFISSDLSLTNVLFVPTFKCNLLSIAQLTQDSNCKCTFYPSHCLFQDLKTDRVMAV 2134
+ G+V I +L+L NVL VP FK NLLS+ +L+ +C F P+ C+ QDL +
Sbjct: 471 YTGNVNILPNLTLYNVLHVPDFKYNLLSVHKLSNHLHCNILFTPNTCVLQDLSLRKEQVF 530
Query: 2133 GQAVGKLYMLQVTS--------------------------SVPSSFLQNSLLTTYTDDSC 2032
G+ LY+L+ + S+P +++ + C
Sbjct: 531 GEVGDGLYLLKPSRKQSQSSSNIVSFQKGRNSIVVSSEVVSIPKGNHSSTVSVSVAKSDC 590
Query: 2031 NTEQIDTHCNNV--LTLWHKRLGHASCNTLKHLPFLHSLCTETLQHDLKNCEVCHISKQH 1858
N V + LWH RLGH + +K+L FL + C VC ++QH
Sbjct: 591 MHFSTPIFANVVPNVALWHVRLGHLPFSVMKNLSFL-----SINSNSQYICPVCPKARQH 645
Query: 1857 RHPFPTSYSCTSAPFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCTSTYLMSHKSQV 1678
R PFP S + FEL+H+D WGP+ T + YFLT+VDDYSR T T+L+ KS
Sbjct: 646 RLPFPISAIKSKVLFELLHIDTWGPYKTSTHDGYN-YFLTIVDDYSRGTWTFLLKTKSNA 704
Query: 1677 PYLLEKFILMVKNQFQCVVNTFRSDNGTEFVN-TQCTSLFHNHGIIHQRSCVYTPQQNGI 1501
+L+ F+ MV QF V RSDN E TQ + F + GIIH+RSCV TPQQNG+
Sbjct: 705 FPVLKDFLAMVDRQFGLKVKKIRSDNAMELGRGTQEAAFFCSAGIIHERSCVATPQQNGV 764
Query: 1500 VERKHRHLLDTARALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTPYEMLYHKAPD 1321
VERKH+HLL+ AR LLF S LPI +W +LTAT+L+NRLPS +L TPYE+++ PD
Sbjct: 765 VERKHKHLLELARGLLFHSHLPIQYWGECILTATHLVNRLPSKVLMGMTPYEVIFATPPD 824
Query: 1320 YSLLKPFGCLAFATNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVTHKFLVTREAYF 1141
Y+ K FGCL + + + + KF P+A +C+F+GY +KGYK+ +LVT K V+R+ F
Sbjct: 825 YANFKVFGCLCYVSTLSHARDKFQPKATECVFIGYPPNQKGYKIMDLVTRKIFVSRDVKF 884
Query: 1140 VESEFPTYTTDTSPPLP---------------IPPSNDTDYFSTXXXXXXXXXXXXXXXX 1006
ES FP + T S P +PPS
Sbjct: 885 HESHFP-FATQCSSSTPSHLFTAPDLLPDSSSLPPSLPLFGTPNPPEPESIPSSSLPRTS 943
Query: 1005 XXXXXXXXLRKAPRHTSKPARLTDFVTYSSTTPQPTTAFPEALXXXXXXXXXXXXXXXXX 826
+RK+ R + KP+ L DFV S T +
Sbjct: 944 TPVSSPTPVRKSERISQKPSYLKDFVCNSILLTDVTNSCFVHSNRPTAFAFAALSIGNQQ 1003
Query: 825 XXXXXXXMQEPSSYTQASKDPGWVEAMNKELEALELNNTWVLTTLPQGKSAIGCKWVYKV 646
+ EP S+ +ASK GW +AM EL ALE N TWV+T LP GK + CKWVYKV
Sbjct: 1004 MLHSLSVLTEPKSFAEASKHAGWQQAMKDELAALEHNKTWVVTELPPGKKPLPCKWVYKV 1063
Query: 645 KRHPDGTVERLKARLVAKGYHQVYGVDYMDSF 550
K + DG+VERLKARLV +G Q G+DY ++F
Sbjct: 1064 KHNSDGSVERLKARLVVRGDIQREGIDYGETF 1095
>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 634 bits (1636), Expect = 0.0
Identities = 409/1237 (33%), Positives = 601/1237 (48%), Gaps = 49/1237 (3%)
Frame = -2
Query: 3573 DEPLLLHGSDHPGMMLVSSPLTGANYLSWKRSISIALGAKTKLGFINGKIKPPAEESPKF 3394
+ PLLLH SDHPG+ +V+ L G+NY SW ++ I+L AK KLGF++G + P+ + F
Sbjct: 55 ENPLLLHSSDHPGLSIVAHILDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPSVDDSTF 114
Query: 3393 EQWQKVDFMVISWILNSISKEISEAFIYAKSARELWLDIEERFGQSNGPQLYQLQREIST 3214
W + + MV +N P+ YQL++ + T
Sbjct: 115 RIWSRCNSMV-----------------------------------NNLPRRYQLEQAVMT 139
Query: 3213 ISQGNASVMVYFTRLKRLWDEYSNLLPTPA--CVCAGHKQTVENDKSTRLMQFLMGLTDA 3040
+ QG + YFT+ K LW++ +N C C K+ +E +++R++QFLMGL+D
Sbjct: 140 LQQGKLDLSTYFTKKKTLWEQLANTKSRSVKKCDCDQVKELLEEAETSRVIQFLMGLSDD 199
Query: 3039 YEQTRSQILLMDPLPDVNKAYSMVLRIEKQRSVHQGLPDGLEGAAMVANTNKYMNQRPGP 2860
+ RSQI M P P +N+ Y+M+ + E QR V + T +N +
Sbjct: 200 FNTIRSQIFNMKPRPGLNEIYNMLDQDESQRLVGFAAKSVPSPSPAAFQTQGVLNDQ--- 256
Query: 2859 WSGSKPRAQSAPMRKSKEEKAKLICKHCQAPGHEITECFKLVGYPDWFRLPKEQRGRPMA 2680
+ + + +K K C HC GH + +C+K+ GYP KE
Sbjct: 257 --------NTILLAQGNFKKPK--CTHCNRIGHTVDKCYKVHGYPPGHPRAKENTYVGST 306
Query: 2679 NLVSAEPIQDKKD---DAGVHKGIQTADLSNIIQQEFAKLMANMSTGGKDKGGMSFAH-- 2515
NL S + I+ + A H+ + + +I KL + T DK S ++
Sbjct: 307 NLASTDQIETQAPPTMSATGHETMSNDHIQQLISYLSTKLQSPSITSCFDKAIASSSNPV 366
Query: 2514 ----------FAGYTGKDPSSYQCA---FSTFE---------------HLDKGSWIIDTG 2419
A + PS Q FS ++ L +W+ID+G
Sbjct: 367 PSISQITDKAIASSSNPVPSISQITGTFFSLYDSTYYEMLTSSIPIETELSLRAWVIDSG 426
Query: 2418 ASRHMCTSLSLLTNLRTISDPITVFMPDGTSKSVTHIGDVFISSDLSLTNVLFVPTFKCN 2239
AS H+ +L + + D V +P+G + + G + ++ LSL NVLF+P FK N
Sbjct: 427 ASHHVTHERNLYHTYKAL-DRTFVRLPNGHTVKIEGTGFIQLTDALSLHNVLFIPEFKFN 485
Query: 2238 LLSIAQLTQDSNCKCTFYPSHCLFQDLKTDRVMAVGQAVGKLYMLQVTSSVP--SSFLQN 2065
LLS++ LT+ K +F C+ Q L + ++ G VG LY+L + S+ SSF
Sbjct: 486 LLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQVGNLYILNLDKSLVDVSSFPGK 545
Query: 2064 SLLTTYTDDSCNTEQIDTHCNNVLTLWHKRLGHASCNTLKHLPFLHSLCTETLQHDLKNC 1885
S+ ++ ++S +WHKRLGH S + L + L + + D +C
Sbjct: 546 SVCSSVKNES--------------EMWHKRLGHPSFAKIDTLSDVLMLPKQKINKDSSHC 591
Query: 1884 EVCHISKQHRHPFPTSYSCTSAPFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCTST 1705
VCH+SKQ PF + FELVH+D WGPF T+ + YFLT+VDD+SR T
Sbjct: 592 HVCHLSKQKHLPFKSVNHIREKAFELVHIDTWGPFSVPTVDSYR-YFLTIVDDFSRATWI 650
Query: 1704 YLMSHKSQVPYLLEKFILMVKNQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQRSCV 1525
YL+ KS V + F+ MV+ Q+ V + RSDN E + LF GI C
Sbjct: 651 YLLKQKSDVLTVFPSFLKMVETQYHTKVCSVRSDNAHEL---KFNELFAKEGIKADHPCP 707
Query: 1524 YTPQQNGIVERKHRHLLDTARALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTPYE 1345
TP+QN +VERKH+HLL+ ARAL+FQS +P+++W +LTA +LINRL S ++ +TPYE
Sbjct: 708 ETPEQNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPVINNETPYE 767
Query: 1344 MLYHKAPDYSLLKPFGCLAFATNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVTHKF 1165
L PDYS LK FGCL + + ++KFDPRA CIFLGY +G KGYKL ++ T+
Sbjct: 768 RLTKGKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSV 827
Query: 1164 LVTREAYFVESEFPTYTT-------DTSPPLPIPPSNDTDYFSTXXXXXXXXXXXXXXXX 1006
++R F E FP ++ D P + +P N+ ++
Sbjct: 828 SISRHVIFYEDIFPFASSNITDAAKDFFPHIYLPAPNNDEHLPLVQSSSDAPHNHDESSS 887
Query: 1005 XXXXXXXXLRKAPRHTSKPARLTDFVTYSSTTPQPTTAFPEALXXXXXXXXXXXXXXXXX 826
K+ R P+ L DF Y++T PTT
Sbjct: 888 MIFVPSEP--KSTRQRKLPSHLQDFHCYNNT---PTTTKTSPYPLTNYISYSYLSEPFGA 942
Query: 825 XXXXXXXMQEPSSYTQASKDPGWVEAMNKELEALELNNTWVLTTLPQGKSAIGCKWVYKV 646
+ P Y++A D W +AM KE+ A TW + LP GK A+GCKW+ +
Sbjct: 943 FINIITATKLPQKYSEARLDKVWNDAMGKEISAFVRTGTWSICDLPAGKVAVGCKWIITI 1002
Query: 645 KRHPDGTVERLKARLVAKGYHQVYGVDYMDSFSPVAKLVTVRMLIAVATLKGWPLHQLDI 466
K DG++ER KARLVAKGY Q G+D+ ++FSPVAK+VTV++L+++A W LHQLDI
Sbjct: 1003 KFLADGSIERHKARLVAKGYTQQEGIDFFNTFSPVAKMVTVKVLLSLAPKMKWYLHQLDI 1062
Query: 465 NNAFLHGFLDEAIYMQPPLGYKKARAGEVCLLKRSLYGLKQASRQWNTEFCSKLTAYGFL 286
+NA L+G L+E IYM+ P GY + + EV
Sbjct: 1063 SNALLNGDLEEEIYMKLPPGYSEIQGQEV------------------------------- 1091
Query: 285 QSPHDSC-----LFIKHTADTLLFVLIYVDDVLVTGSDIDAISHLKQYLDDLFTIKDLGV 121
SP+ C LF+K L VL+YVDD+L+ + A + L L F ++DLG
Sbjct: 1092 -SPNAKCHGDHTLFVKAQDGFFLVVLVYVDDILIASTTEAASAELTSQLSSFFQLRDLGE 1150
Query: 120 ANYFLGLELARTSSGTYLNQRKYVLDILSDMGLLDCK 10
+FLG+E+AR + G L QRKYVLD+L+ DCK
Sbjct: 1151 PKFFLGIEIARNADGISLCQRKYVLDLLASSDFSDCK 1187
Score = 198 bits (504), Expect = 1e-47
Identities = 106/240 (44%), Positives = 142/240 (59%)
Frame = -2
Query: 4695 PFPHGLRLIGECGVPLKDPDQYRRLVGRLLYLNLTRPDISFCVQQLSQFVNNPFSTHWDA 4516
P +L + G L+D QYRR++G+L YL LTRPDI+F V +L+Q+ + P H A
Sbjct: 1192 PMEPNQKLSKDTGTLLEDGKQYRRILGKLQYLCLTRPDINFAVSKLAQYSSAPTDIHLQA 1251
Query: 4515 ALHLLRYLKGCXXXXXXXXXXXXXXXXXXSDADWATCKDTRRPITGYCVFLGECLISWKS 4336
+LRYLKG SD+DW TC DTRR +TG+ +F+G L+SW+S
Sbjct: 1252 LHKILRYLKGTIGQGLFYGADTNFDLRGFSDSDWQTCPDTRRCVTGFAIFVGNSLVSWRS 1311
Query: 4335 KKQTTVSRSSAEAEYRALSTTVCEVQWITFLASDMLLSLPVPIPLYCDNQAALYIVANPV 4156
KKQ VS SSAEAEYRA+S E+ W+ ++ + + P LYCDN+AAL+I N V
Sbjct: 1312 KKQDVVSMSSAEAEYRAMSVATKELIWLGYILTAFKIPFTHPAYLYCDNEAALHIANNSV 1371
Query: 4155 FHERTKHLEIDCHLVRHQYKAGLVLPQKVASSAQLADMFTKLLASPVFSSFLSKLHMADL 3976
FHERTKH+E DCH VR +AG++ V + QLAD TK L F SKL + ++
Sbjct: 1372 FHERTKHIENDCHKVRECIEAGILKTIFVRTDNQLADTLTKPLYPKPFRENNSKLGLLNI 1431
>gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1136
Score = 603 bits (1554), Expect = 0.0
Identities = 371/947 (39%), Positives = 515/947 (54%), Gaps = 18/947 (1%)
Frame = -2
Query: 2787 CKHCQAPGHEITECFKLVGYPDWFRLPKEQRGRPMANLVSAEPIQDKKDDAGVHKGIQTA 2608
C HC GH I C++ G+P + P + + + V+ D V + Q+
Sbjct: 1 CTHCGKTGHTIEVCYQKHGFPPGSK-PLSDKTASVNHTVTG--------DCKVTESTQSL 51
Query: 2607 DLSNI--IQQEFAKLMA--NMSTGGKDKGGMSFAHFAGYTGKDPSSYQCAFSTFEHLDKG 2440
+ ++ Q++ L+A ST G SF A ST
Sbjct: 52 ESQDVRFTPQQYQALLALIQQSTTGTSASCTSFPIVCS-----------AIST-----PS 95
Query: 2439 SWIIDTGASRHMCTSLSLLTNLRTISDPITVFMPDGTSKSVTHIGDVFISSDLSLTNVLF 2260
SWI+D+GA+ H+ ++LS ++ I+ PI V +P G S TH G V ++ L +VL+
Sbjct: 96 SWILDSGATDHVSSTLSHFSSFSPIN-PIDVKLPTGQHVSATHSGIVKFTNSFYLVDVLY 154
Query: 2259 VPTFKCNLLSIAQLTQDSNCKCTFYPSHCLFQDLKTDRVMAVGQAVGKLYMLQVTSSVPS 2080
+P F NL+SI++L +C+ F C+ Q+ T + + G LY
Sbjct: 155 IPDFTYNLISISKLVSSLSCQFIFDRHSCIIQETNTMKKIGTVDVNGGLY---------- 204
Query: 2079 SFLQNSLLTTYTDD-----SCNTEQIDTHCNNVLTLWHKRLGHASCNTLKHL----PFLH 1927
SF N++ T+ C+ + ID LWH R+GH S L+ + PFL
Sbjct: 205 SFTANNIHNPSTNSIIVHPKCSIQPID--------LWHFRMGHLSQERLQLMKQSFPFLS 256
Query: 1926 SLCTETLQHDLKNCEVCHISKQHRHPFPTSYSCTSAPFELVHVDVWGPFHCGTLFWHTPY 1747
+C CH KQ + FP S+S PF+L+H+D+WGP ++ H Y
Sbjct: 257 V-------DKSFSCNTCHHDKQKKLSFPLSHSYALQPFDLLHMDIWGPCPVTSMHGHK-Y 308
Query: 1746 FLTLVDDYSRCTSTYLMSHKSQVPYLLEKFILMVKNQFQCVVNTFRSDNGTEFVNTQCTS 1567
FL +VDD++R T +LM +KS+ + FI V+ QF V R+DNG EF TQ
Sbjct: 309 FLAIVDDHTRFTWLFLMQNKSETRQHIINFINQVETQFDKNVKVIRTDNGLEFSMTQ--- 365
Query: 1566 LFHNHGIIHQRSCVYTPQQNGIVERKHRHLLDTARALLFQSKLPIDFWPFSLLTATYLIN 1387
F + GIIHQ +CV TPQQNGIVERKH+HLL+ R+LLFQ+ LP FW F+L A +LIN
Sbjct: 366 YFSSKGIIHQTTCVETPQQNGIVERKHQHLLNVTRSLLFQANLPSIFWCFALKHAAFLIN 425
Query: 1386 RLPSSLLKWKTPYEMLYHKAPDYSLLKPFGCLAFATNILPHKSKFDPRAHKCIFLGYEIG 1207
+P+ L +P+E LY D S+L+ FGCL +++ I H++K DPRAH CIFLG++
Sbjct: 426 CIPTPFLHNISPFEKLYGHPCDISILRVFGCLCYSSIITSHRTKLDPRAHPCIFLGFKPH 485
Query: 1206 KKGYKLFNLVTHKFLVTREAYFVESEFPTYTTDTSP----PLPIPPSNDTDYFSTXXXXX 1039
KGY L NL TH LV++ F E FP++T SP P+PIP N DY S
Sbjct: 486 TKGYLLVNLHTHGLLVSQNVIFHEDHFPSFTKPNSPSFSSPVPIP-YNYADYPS--FPSS 542
Query: 1038 XXXXXXXXXXXXXXXXXXXLRKAPRHTSKPARLTDFV-TYSSTTPQPTTAFPEALXXXXX 862
LR++ R P L DF ++ST P +T L
Sbjct: 543 SIVESSEPPPPDQHSSPPPLRRSTRPRRPPTYLQDFHGAFTSTGPHSSTGIRHPLHSFIS 602
Query: 861 XXXXXXXXXXXXXXXXXXXMQEPSSYTQASKDPGWVEAMNKELEALELNNTWVLTTLPQG 682
+P ++ +ASK W++AM++E+ ALE NNTWVLTTLP
Sbjct: 603 YDRLSPSFHHYVFSISSVT--KPKNFVEASKSDSWLKAMHEEISALEANNTWVLTTLPPH 660
Query: 681 KSAIGCKWVYKVKRHPDGTVERLKARLVAKGYHQVYGVDYMDSFSPVAKLVTVRMLIAVA 502
K+AIGC+WVYKVK DG+++R KARLVAKGY Q+ G+D+ D+FSPVAKL TVR+LI++A
Sbjct: 661 KTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLISLA 720
Query: 501 TLKGWPLHQLDINNAFLHGFLDEAIYMQPPLGYKKARAGEVCLLKRSLYGLKQASRQWNT 322
+ L QLD+NN+FLHG L+E +YMQ P G + G+VC L+RSLYGLKQASRQW
Sbjct: 721 AIHNCHLKQLDVNNSFLHGDLNEEVYMQLPPGITPSFPGQVCRLQRSLYGLKQASRQWYA 780
Query: 321 EFCSKLTAYGFLQSPHDSCLFIKHTADTLLFVLIYVDDVLVTGSDIDAISHLKQYLDDLF 142
S L +G++ SP D LF+K + +LIYVDD+++ G+D+ I HL L + F
Sbjct: 781 RLSSFLIQHGYVPSPSDHSLFLKCSPAITTAILIYVDDIVLAGNDLTEIHHLTSLLHNTF 840
Query: 141 TIKDLGVANYFLGLELARTSSGTYLNQRKYVLDILSDMGLLDCKSVA 1
IKDLG YFLGLE+AR +G +L QRKY LD+LSD G+L K V+
Sbjct: 841 QIKDLGNLKYFLGLEVARNHTGIHLCQRKYTLDLLSDTGMLASKPVS 887
Score = 248 bits (634), Expect = 1e-63
Identities = 130/243 (53%), Positives = 159/243 (65%)
Frame = -2
Query: 4704 VATPFPHGLRLIGECGVPLKDPDQYRRLVGRLLYLNLTRPDISFCVQQLSQFVNNPFSTH 4525
V+TP + L G P D YRRLVGRL+YL TRP I++ VQQLSQFV+NP + H
Sbjct: 886 VSTPMDYSTHLSASSGTPFTDTAAYRRLVGRLIYLPNTRPAIAYAVQQLSQFVSNPPTAH 945
Query: 4524 WDAALHLLRYLKGCXXXXXXXXXXXXXXXXXXSDADWATCKDTRRPITGYCVFLGECLIS 4345
A +L YLKG SD DWA C DTRR ITG+ V+LG+ LIS
Sbjct: 946 RQALFRILCYLKGTPGSGIFLSVNSSVQLRAFSDYDWAGCPDTRRSITGFAVYLGDSLIS 1005
Query: 4344 WKSKKQTTVSRSSAEAEYRALSTTVCEVQWITFLASDMLLSLPVPIPLYCDNQAALYIVA 4165
WKSKKQ TVSRSS+EAEYRAL+TT CE+QW+++L D + L P LYCDNQ AL I +
Sbjct: 1006 WKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDLIRPSILYCDNQFALQIAS 1065
Query: 4164 NPVFHERTKHLEIDCHLVRHQYKAGLVLPQKVASSAQLADMFTKLLASPVFSSFLSKLHM 3985
NP+FHERTKH+EIDCH+VR + GL+ V+SS QLAD+ TK L+ VF S SKL M
Sbjct: 1066 NPIFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSLQLADILTKPLSPFVFHSHYSKLGM 1125
Query: 3984 ADL 3976
++
Sbjct: 1126 LNI 1128
>ref|XP_010683397.1| PREDICTED: uncharacterized protein LOC104898087 [Beta vulgaris subsp.
vulgaris]
Length = 1038
Score = 573 bits (1478), Expect = e-179
Identities = 368/1007 (36%), Positives = 512/1007 (50%), Gaps = 59/1007 (5%)
Frame = -2
Query: 3558 LHGSDHPGMMLVSSPLTGANYLSWKRSISIALGAKTKLGFINGKIKPPAEESPKFEQWQK 3379
L D P L + L G N+L+W R I +ALGAK KL FI+GK P +S + ++W +
Sbjct: 25 LGSGDQPDQHLGTHKLNGDNFLTWNRGIRLALGAKNKLTFIDGKTPRPPSDSEELQKWMR 84
Query: 3378 VDFMVISWILNSISKEISEAFIYAKSARELWLDIEERFGQSNGPQLYQLQREISTISQGN 3199
D+M+ SW+LNS+ K I+E FI +SA +L+ +I ER+GQSN PQL++L + +S+I QG+
Sbjct: 85 NDYMIQSWLLNSMDKLIAEGFILQQSANQLYEEILERYGQSNAPQLFELHKHLSSIHQGS 144
Query: 3198 ASVMVYFTRLKRLWDEYSNLLPTPACVCAGH--------KQTVENDKSTRLMQFLMGLTD 3043
S++ Y+++LKR+WDE L P C C K+ + D+ +L+Q L+GL
Sbjct: 145 DSIVQYYSKLKRVWDEIQLLDGFPDCDCGALAKCSCVILKKVLAADQKQKLIQLLVGLDR 204
Query: 3042 AYEQTRSQILLMDPLPDVNKAYSMVLRIEKQRSVHQGLPDGLEGAAMVANTNKYMNQRPG 2863
Y+ + IL MDPLP+VN+AY M+L++E+Q ++ L+ +A +
Sbjct: 205 GYDTVTTNILSMDPLPNVNRAYYMLLQVERQTRLNIQQDTSLQTSAFNSMKQSGFQHNNA 264
Query: 2862 PWSGSKPRAQSAPMRKSKEEKAKLICKHCQAPGHEITECFKLVG-YPDWFRLPKEQRGRP 2686
S+P + ++ K +KA C +C+ GH + +CFKL G YP+WF K +
Sbjct: 265 HIHPSQPERRDG--KRIKYDKASRKCDYCKKSGHTMDQCFKLTGVYPEWFLNMKNKSLPT 322
Query: 2685 MANLVSAEPIQDKKDDA----------GVHKGIQTADLSNIIQQEFAKLMANMSTGGKDK 2536
+ A + D + H +A + + + Q K M M G +
Sbjct: 323 SSTSKLAAHVGDTTGECLGATPLDIVPSYHSHQPSAQVDSALVQAVYKEMLKMVKGQPHQ 382
Query: 2535 GGMSFAHFAGYTGKDPSSYQCAFSTFEHLDKGSWIIDTGASRHMCTSLSLLTNLRTISDP 2356
F + G S S + DK +WI+DTGA+ HM SL T+ ++ P
Sbjct: 383 APSEFTSSVNFAGI--MSVSTVNSVSQSHDKFAWIVDTGATDHMIWDRSLYTSFTSLITP 440
Query: 2355 ITVFMPDGTSKSVTHIGDVFISSDLSLTNVLFVPTFKCNLLSIAQLTQDSNCKCTFYPSH 2176
I V +PDGT+K V G V +++ + L +VL +P F NLLS ++L +N F S
Sbjct: 441 IKVGLPDGTTKVVYITGIVHLTAKIILKDVLLIPDFTHNLLSFSKLLSQNNLLAIFTSSS 500
Query: 2175 CLFQDLKTDRVMAVGQAVGKLYMLQVTSSVPSSFLQNSLLTTYTDDSCNTEQ--IDTHCN 2002
FQD T + A+G LY SSVP+ +++ SC + +DT
Sbjct: 501 YHFQDPTTKEIQAIGSQQAGLYKF---SSVPT-------VSSDVSSSCFNKSFHVDTSVP 550
Query: 2001 NVLTLWHKRLGHASCNTLKHLPFLHSLCTETLQHDLKNCEVCHISKQHRHPFPTSYSCTS 1822
N TL H RL H S T+ L SL + CE C +K H PFP S+S
Sbjct: 551 NFSTL-HARLCHLSTQTMSKL----SLPYKPNNTSDFCCEPCVFAKSHSTPFPVSHSHAG 605
Query: 1821 APFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCTSTYLMSHKSQVPYLLEKFILMVK 1642
A F+LVHVD+WGP+ +L YFLT++DDYSR T T+L+S KSQVP LL++FI V+
Sbjct: 606 AIFQLVHVDLWGPYRQPSLSGAC-YFLTILDDYSRTTWTHLVSSKSQVPTLLQEFIAYVE 664
Query: 1641 NQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQRSCVYTPQQNGIVERKHRHLLDTAR 1462
N F + RSDNGTE CT LF + GIIHQRS PQQNG VERKH+HLL+TAR
Sbjct: 665 NHFNTSIKIIRSDNGTEIFQAVCTHLFASKGIIHQRSLPGKPQQNGRVERKHKHLLETAR 724
Query: 1461 ALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTPYEMLYHKAPDYSLLKPFGCLAFA 1282
AL F + LP FW LL ATYLIN +PSS+L+WKTPYE L P Y L+ GCL +A
Sbjct: 725 ALTFHASLPKKFWGECLLAATYLINLMPSSVLQWKTPYEFLMKLVPSYEHLRVIGCLCYA 784
Query: 1281 TNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVTHKFLVTREAYFVESEFPTYTTDT- 1105
+ + KF PRA KC+FLGY G+KGYKL++L +HK ++R+ F E FP + +
Sbjct: 785 S--IKTFDKFAPRARKCVFLGYPYGQKGYKLYDLESHKIFLSRDVKFQEHVFPFAQSSSV 842
Query: 1104 --------SPPLPIPPSNDTD---YFS--------------------TXXXXXXXXXXXX 1018
S P+ P +D D +FS T
Sbjct: 843 SSESIHSISSPMVNPGIHDDDIPFFFSPSHTQPISSPLSMNDHSSHPTLTTSPPTSSPTA 902
Query: 1017 XXXXXXXXXXXXLRKAP------RHTSKPARLTDFVTYSSTTPQPTTAFPEALXXXXXXX 856
AP RH +L DFV SS P+++ +
Sbjct: 903 NTSPTDHTSVSSSSGAPPLRRSLRHKLPSTKLKDFVVPSSHL--PSSSLSSSFNVFTCPE 960
Query: 855 XXXXXXXXXXXXXXXXXMQEPSSYTQASKDPGWVEAMNKELEALELN 715
EPSSY QA DP WVEAMNKEL+AL+LN
Sbjct: 961 LQHFSPTSFASLANVLSHVEPSSYAQAKTDPRWVEAMNKELDALDLN 1007
>gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1002
Score = 548 bits (1411), Expect = e-170
Identities = 312/779 (40%), Positives = 434/779 (55%), Gaps = 12/779 (1%)
Frame = -2
Query: 2307 GDVFISSDLSLTNVLFVPTFKCNLLSIAQLTQDSNCKCTFYPSHCLFQDLKTDRVMAVGQ 2128
G +F S D L +VL++P F NL+S+++L + C+ TF C QD ++ +++ +
Sbjct: 1 GSIFFSEDFFLADVLYIPEFNFNLVSVSRLIRQLGCRLTFSGDLCDIQDSQSMKMIGAAK 60
Query: 2127 AVGKLYMLQVTSSVPSSFLQNSLLTTYTDDSCNTEQIDTHCNNVLTLWHKRLGHASCNTL 1948
LY+L V + +Y +D LWH RLGH + L
Sbjct: 61 HNMGLYVLDWKPKVCLYLHSVNNFHSYDND----------------LWHIRLGHLAHEKL 104
Query: 1947 K----HLPFLHSLCTETLQHDLKNCEVCHISKQHRHPFPTSYSCTSAPFELVHVDVWGPF 1780
+ + PF+ + + C VC+++KQ + PF S + F+L+HVD+WGP
Sbjct: 105 QAMKSNFPFIDC------KKNKDPCNVCYLAKQRQLPFSHSVTKADEIFDLLHVDIWGPT 158
Query: 1779 HCGTLFWHTPYFLTLVDDYSRCTSTYLMSHKSQVPYLLEKFILMVKNQFQCVVNTFRSDN 1600
++F H +FLT+VDD SR T Y M HKS+V L FI +++NQF V RSDN
Sbjct: 159 TPASIFGHK-FFLTIVDDKSRHTWVYFMKHKSEVADHLSSFITLIENQFGKKVKCVRSDN 217
Query: 1599 GTEFVNTQCTSLFHNHGIIHQRSCVYTPQQNGIVERKHRHLLDTARALLFQSKLPIDFWP 1420
G EF+ + +H GI+HQ SCV TPQQNGIVERKH+H++ ARAL+ QS LP FW
Sbjct: 218 GPEFL---LKNFYHEKGILHQTSCVETPQQNGIVERKHQHIMTVARALVMQSNLPKSFWF 274
Query: 1419 FSLLTATYLINRLPSSLLKWKTPYEMLYHKAPDYSLLKPFGCLAFATNILPHKSKFDPRA 1240
+++ A +LINR PSS L+ K PYE++Y+ PD + +K FGCLA+AT + ++ KFDPR
Sbjct: 275 YAVSHAVFLINRQPSSFLENKIPYEIIYNALPDLAGIKVFGCLAYATTLHHNRKKFDPRG 334
Query: 1239 HKCIFLGYEIGKKGYKLFNLVTHKFLVTREAYFVESEFPTYTT---DTSPPLPIPPSNDT 1069
+C+FLG++ KG L++L + + ++R + E FP T D + + +P
Sbjct: 335 RRCVFLGFKPQVKGSILYDLNSRETFLSRHVEYFEHIFPFLPTSPLDLTQTISLPRHQPP 394
Query: 1068 DYFSTXXXXXXXXXXXXXXXXXXXXXXXXLRKAPRHTSKPARLTDFVTYSSTTPQPTTAF 889
T +RK+ R P+ L D+ TT T
Sbjct: 395 LPIDTDPTPLSTNTTPTSSPVSVVPPPPFVRKSTRPRKLPSYLHDYHHTLLTTHNSPTIS 454
Query: 888 PEALXXXXXXXXXXXXXXXXXXXXXXXXMQEPSSYTQASKDPGWVEAMNKELEALELNNT 709
++EP+SY +A +D W A+ EL ALE NNT
Sbjct: 455 QPLYSIHNHISYSNLSPSQKAFSLSISSIKEPNSYVEAIQDESWKTAIQTELTALEKNNT 514
Query: 708 WVLTTLPQGKSAIGCKWVYKVKRHPDGTVERLKARLVAKGYHQVYGVDYMDSFSPVAKLV 529
W+LT LP K +GCKWV+K+K + DGT+ER KARLVAKGY Q +DY+D+FSPV K+
Sbjct: 515 WILTPLPPNKQVVGCKWVFKLKFNSDGTIERHKARLVAKGYTQTETLDYLDTFSPVVKMT 574
Query: 528 TVRMLIAVATLKGWPLHQLDINNAFLHGFLDEAIYMQPPLGYKKA--RAGEVCLLKRSLY 355
TVR L+AVAT K W +HQLD+N FLHG L E +YM PP G + ++ VC L +SLY
Sbjct: 575 TVRTLLAVATAKNWHIHQLDVNTTFLHGDLHEEVYMTPPPGLTVSPHQSNCVCKLVKSLY 634
Query: 354 GLKQASRQWNTEFCSKLTAYGFLQSPHDSCLFIKHTADTLLFVLIYVDDVLVTGSDIDAI 175
GLKQASRQWN + S L GF QS D LF K +L+YVDD+++ G+D I
Sbjct: 635 GLKQASRQWNAKLTSVLIDSGFKQSMADYSLFTKQFGAKFTAILVYVDDLVLAGNDPTEI 694
Query: 174 SHLKQYLDDLFTIKDLGVANYFLGLELARTSSGTYLNQRKYVLDILSDMGLL---DCKS 7
+++K LD FTIKDLG YFLG+E+AR+S+G L QRKY LD++ D GLL CKS
Sbjct: 695 NYIKSLLDQKFTIKDLGQLKYFLGMEVARSSTGIALYQRKYALDLIEDTGLLASKPCKS 753
Score = 246 bits (628), Expect = 2e-63
Identities = 121/241 (50%), Positives = 161/241 (66%)
Frame = -2
Query: 4698 TPFPHGLRLIGECGVPLKDPDQYRRLVGRLLYLNLTRPDISFCVQQLSQFVNNPFSTHWD 4519
+P H ++L G PL DP QYRRL+GRL+YL TR DISF V LSQF++ P H+
Sbjct: 753 SPMDHSVKLHKTVGTPLTDPTQYRRLLGRLIYLTNTRADISFSVNHLSQFMDQPTDVHYQ 812
Query: 4518 AALHLLRYLKGCXXXXXXXXXXXXXXXXXXSDADWATCKDTRRPITGYCVFLGECLISWK 4339
AAL +L+Y+K SD+DWA+C DTRR +TG+ FLG LISWK
Sbjct: 813 AALRILKYVKNAPGKGLFFPSSSDLTLKGYSDSDWASCSDTRRSVTGFSFFLGPALISWK 872
Query: 4338 SKKQTTVSRSSAEAEYRALSTTVCEVQWITFLASDMLLSLPVPIPLYCDNQAALYIVANP 4159
SKKQ TVS+SSAEAEYRAL+ + CE QW+++L D L PI L+CDNQ+AL+I +NP
Sbjct: 873 SKKQATVSKSSAEAEYRALAQSTCEAQWLSYLLHDFGLHSFHPIVLFCDNQSALHIASNP 932
Query: 4158 VFHERTKHLEIDCHLVRHQYKAGLVLPQKVASSAQLADMFTKLLASPVFSSFLSKLHMAD 3979
VFHERTK++E+DCH+VR + + GL+ ++++ QLAD+FTK L+ F + KL M D
Sbjct: 933 VFHERTKNIELDCHIVREKLQVGLIHLLPISTADQLADVFTKALSLRPFEQIIFKLGMFD 992
Query: 3978 L 3976
+
Sbjct: 993 I 993
>ref|XP_012857659.1| PREDICTED: uncharacterized protein LOC105976934 [Erythranthe guttata]
Length = 944
Score = 541 bits (1395), Expect = e-168
Identities = 340/941 (36%), Positives = 496/941 (52%), Gaps = 42/941 (4%)
Frame = -2
Query: 3597 AHQTVTKEDEPLLLHGSDHPGMMLVSSPLTGANYLSWKRSISIALGAKTKLGFINGKI-K 3421
A + P LH SD PG++LVSS L NY +W R++ I+L K KLGFI+G I K
Sbjct: 3 ARSRIDDISSPYYLHPSDGPGLVLVSSLLREDNYAAWNRAMMISLTVKNKLGFIDGSITK 62
Query: 3420 PPAEESPKFEQWQKVDFMVISWILNSISKEISEAFIYAKSARELWLDIEERFGQSNGPQL 3241
PPA+E+ W + + +VISWILN+IS +I + +Y++SA ++W D++ RF Q+NGP++
Sbjct: 63 PPADEALLLNAWVRNNSIVISWILNAISPDIQASVMYSESAHDIWNDLKIRFSQTNGPRI 122
Query: 3240 YQLQREISTISQGNASVMVYFTRLKRLWDEYSNLLPT---PACVCAGHKQTVENDKSTRL 3070
+QL+RE++ ++Q SV VYFT+LK +WDE N PT C C G + ++ +
Sbjct: 123 FQLRRELANLTQDQQSVNVYFTKLKAIWDELDNFRPTCTCGRCSCGGVDKLQDHHHIEHV 182
Query: 3069 MQFLMGLTDAYEQTRSQILLMDPLPDVNKAYSMVLRIEKQRSV----HQGLPDGLEGAAM 2902
M FLMGL D+ TR QILLMDPLP +NK +++V + E+ RSV + L AA
Sbjct: 183 MSFLMGLNDSLASTRGQILLMDPLPPINKVFALVSQEERHRSVAVTSSSDVQHSLAFAAR 242
Query: 2901 VANTNKYMNQRPGPWSGSKPRAQSAPMRKSKEEKAKLICKHCQAPGHEITECFKLVGYPD 2722
TN+++ +RP + + + K K+ C HC GH + +C++L G+P
Sbjct: 243 GIQTNQFV-RRP---------QNNQFYGTTSQRKDKIYCTHCHKTGHTVEKCYRLHGFPP 292
Query: 2721 WFRLPKEQRGRPMANLVSAE---PIQDKKDDAGVHKGIQTADLSNIIQQEFAKLMANMST 2551
++ P+++ G M + S++ + D + + LS + L A ++
Sbjct: 293 GYQ-PRQKPG--MTSNQSSQTKFAVNQVSDIVHSDASLNSGSLSQSLPSSDNFLDAMTAS 349
Query: 2550 GGKDKGGMSFAHFAGYTGKDPSSYQCAFSTFEHLDKGS-----------------WIIDT 2422
+ +H A + P H+ + + WI+D+
Sbjct: 350 QCQQLLSYVSSHLANKANQPPHDKNSEIFDTSHISRVTGICLFNALHTPSFMPHHWILDS 409
Query: 2421 GASRHMCTSLSLLTNLRTISDPITVFMPDGTSKSVTHIGDVFISSDLSLTNVLFVPTFKC 2242
GASRH+C + SL N++++S+ V +PD + V IGDV +++ L L NV +VP FK
Sbjct: 410 GASRHICHNKSLFLNMKSVSN-ARVVLPDSSMVLVNCIGDVQLTTHLVLHNVFYVPEFKF 468
Query: 2241 NLLSIAQLTQDSNCKCTFYPSHCLFQDLKTDRVMAVGQAVGKLYMLQVTSSVPSSFLQNS 2062
NL+S++ L S+ F QD ++ G V LY+L S+ P
Sbjct: 469 NLVSVSALLHGSSYVVIFDEFSFSIQDRLMTQI-GKGNKVQGLYVLDPVSASPIE----- 522
Query: 2061 LLTTYTDDSCNTEQIDTHCNNV-LTLWHKRLGHASCNTLKHLPFLHSLCTETLQHDLKNC 1885
CN + T+WH RLGH L L SL + + + C
Sbjct: 523 ---------------HAFCNKISATVWHHRLGHIPQPKLAFLAKKFSLSVDKIS-ESSCC 566
Query: 1884 EVCHISKQHRHPFPTSYSCTSAPFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCTST 1705
VC ++KQ R F S S ++A F+L+H D+WGPF + + YF+TLVDDYSR T
Sbjct: 567 YVCPLAKQKRLHFSNSSSVSTAMFDLIHCDIWGPFKVPS-YSGFHYFVTLVDDYSRFTWV 625
Query: 1704 YLMSHKSQVPYLLEKFILMVKNQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQRSCV 1525
+L+ KS+V ++ +F+ MV NQF + FRSDN E Q SLF G+IHQ SCV
Sbjct: 626 HLLKTKSEVITVVPRFLKMVLNQFGKSIKVFRSDNAYEL---QFKSLFDELGVIHQFSCV 682
Query: 1524 YTPQQNGIVERKHRHLLDTARALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTPYE 1345
YTPQQN IVERKH+H+L+ AR+L FQS +PI +W +LTA +LINR+P+ L +PYE
Sbjct: 683 YTPQQNAIVERKHQHILNVARSLFFQSHIPITYWSECILTAVFLINRIPAHNLNDLSPYE 742
Query: 1344 MLYHKAP-DYSLLKPFGCLAFATNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVTHK 1168
+LY P DY LK FGCL FAT++ HKSKFDPRA+ C+FLGY G KGYKL +LV+HK
Sbjct: 743 LLYPAKPFDYHSLKSFGCLVFATDVSGHKSKFDPRANACVFLGYPSGIKGYKLLDLVSHK 802
Query: 1167 FLVTREAYFVESEFPTYTTDTSPPL------PIPPS------NDTDYFSTXXXXXXXXXX 1024
++R+ F E+ +P +S P+PPS +D+
Sbjct: 803 VFISRDVIFHENIYPFTNKSSSSEFISTDFSPLPPSVIPSFHHDSISEPYPSVSVSVPPI 862
Query: 1023 XXXXXXXXXXXXXXLRKAPRHTSKPARLTDFVTYSSTTPQP 901
LRK+ RH P L+DF + TT P
Sbjct: 863 SSPSNMPVVQPIVPLRKSSRHIKPPTYLSDFKCNAVTTSTP 903
>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
Length = 1535
Score = 553 bits (1426), Expect = e-167
Identities = 332/862 (38%), Positives = 486/862 (56%), Gaps = 29/862 (3%)
Frame = -2
Query: 3567 PLLLHGSDHPGMMLVSSPLTGANYLSWKRSISIALGAKTKLGFINGKIKPPAEES--PKF 3394
P H SDHPG++L+S PL G NY +W+R++++AL AK KLGF+NG IK P+EE+ +
Sbjct: 41 PYFTHHSDHPGLVLISKPLNGDNYSAWRRAMALALNAKNKLGFVNGIIKAPSEETHPDDY 100
Query: 3393 EQWQKVDFMVISWILNSISKEISEAFIYAKSARELWLDIEERFGQSNGPQLYQLQREIST 3214
W + + MV SWI+N+++ EIS++ IY +A E+W D+ ERF QSN P+++++QREI+
Sbjct: 101 ATWSRCNDMVHSWIVNTLNPEISDSVIYYATAHEVWEDLCERFSQSNAPRIFEIQREIAY 160
Query: 3213 ISQGNASVMVYFTRLKRLWDEYSNLLPTPACVCAGHKQTVENDKSTRLMQFLMGLTDAYE 3034
Q S+ VY+T+LK LWDE ++ + G +Q + RLMQFLMGL ++Y
Sbjct: 161 HRQEQLSISVYYTKLKSLWDELASYNDASS----GAQQDQQ-----RLMQFLMGLNESYS 211
Query: 3033 QTRSQILLMDPLPDVNKAYSMVLRIEKQR--SVHQGLPDGLEGAAMVANTNKYMNQRPGP 2860
R QILLM+PLP + +AYS V + EKQR S + AAM +N+ N G
Sbjct: 212 AIRGQILLMNPLPSIRQAYSSVCQEEKQRLLSATHTTAESNSSAAMAVRSNQMKNNSAGN 271
Query: 2859 W----------SGSKPRAQSAPMRKSKEEKAKLICKHCQAPGHEITECFKLVGYPDWFRL 2710
S R R+S K + C +C GH + +C++L GYP
Sbjct: 272 ARSDRSDRFYNSSQDSRRFDQDKRRSGSSKGRPQCTYCGEMGHFVEKCYQLHGYPPGH-- 329
Query: 2709 PKEQRGRPM---ANLVSAEPIQDKKDDAGVHKGIQTADLSNIIQQEFAKLMANMSTGGKD 2539
PK + G N A + D G +K + L+ I + + +L++ ++ D
Sbjct: 330 PKARTGSNFNRHKNTFVANQVSD-----GANKDGGKSVLTGITEAQLQQLLSLLN----D 380
Query: 2538 KGGMSFAHFAGYTGKDPSSYQCAFSTFEHLDKGSWIIDTGASRHMCTSLSLLTNL-RTIS 2362
K G + + K P ++ + WIID A+ H+ +S L + + IS
Sbjct: 381 KDGGTSSQATAVVAK-PGLFK--------ISSHRWIIDNSATDHISSSPKLFLHKDKNIS 431
Query: 2361 DPITVFMPDGTSKSVTHIGDVFISSDLSLTNVLFVPTFKCNLLSIAQLTQDSNCKCTFYP 2182
P+ V +P G ++ G + ++S L +VL VPTFK +L+S+++LT+ NC TF+P
Sbjct: 432 LPL-VLLPSGEKANIVAKGSLPLNSVYYLRDVLCVPTFKVDLMSVSRLTRGLNCSVTFFP 490
Query: 2181 SHCLFQDLKTDRVMAVGQAVGKLYMLQVTSSVPSSFLQNSLLTTYTDDSCNTEQIDTHCN 2002
C+ QDL T R++ +G+ LY L ++ + NS + +CN T
Sbjct: 491 HWCVLQDLATRRMIGLGKQRDGLYYLAALTTNKTE--TNSYSSPNRPPTCNLTTSSTD-- 546
Query: 2001 NVLTLWHKRLGHASCNTLKHLPFLHSLCTETLQHDLKNCEVCHISKQHRHPFPTSYSCTS 1822
LWH RLGH S + L + + ++Q + +C +C ++KQHR PF TS +
Sbjct: 547 ----LWHSRLGHVSHSRLSFIA--KNFLNFSIQFN-NDCPICLLAKQHRLPFGTSEISSE 599
Query: 1821 APFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCTSTYLMSHKSQVPYLLEKFILMVK 1642
PF+L+H D+WG + +L YFLT+VDDY+R T +LM HK + L++ F V
Sbjct: 600 KPFDLIHCDIWGRYKHSSLSG-AHYFLTIVDDYTRFTWIFLMKHKDEAQPLIKHFFSYVS 658
Query: 1641 NQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQRSCVYTPQQNGIVERKHRHLLDTAR 1462
QF + FRSDNG EF++ Q S F ++G++ Q SCVYTPQQNG+VERKHRH+L AR
Sbjct: 659 TQFASHIKIFRSDNGGEFLSLQ--SFFKDNGVLFQHSCVYTPQQNGVVERKHRHILQVAR 716
Query: 1461 ALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTPYEMLYHKAPDYSLLKPFGCLAFA 1282
AL FQ++LP FW LTA ++INRLPS +L +KTP+E LY K P YS L+ FGCLA+A
Sbjct: 717 ALKFQAQLPTQFWGECALTAVHIINRLPSPVLSFKTPFERLYLKPPTYSHLRVFGCLAYA 776
Query: 1281 TNILPHKS-KFDPRAHKCIFLGYEIGKKGYKLFNLVTHKFLVTREAYFVESEFPTYTTD- 1108
TN+ H S KFD RA CIF+GY +G+K YKLFNL T K +R+ F E+ FP + +
Sbjct: 777 TNV--HVSHKFDHRAIACIFIGYPVGQKAYKLFNLSTRKIFTSRDVRFHENRFPYASFES 834
Query: 1107 ---------TSPPLPIPPSNDT 1069
+S P+P+P + T
Sbjct: 835 VLPTSNLGYSSGPIPVPIHDPT 856
Score = 274 bits (701), Expect = 4e-71
Identities = 137/264 (51%), Positives = 186/264 (70%), Gaps = 3/264 (1%)
Frame = -2
Query: 801 QEPSSYTQASKDPGWVEAMNKELEALELNNTWVLTTLPQGKSAIGCKWVYKVKRHPDGTV 622
Q PS + +K EAM EL+AL+ N TW LT+LP GK+ IGC+WVYK+K DG++
Sbjct: 1013 QSPSLFPGLTK-----EAMRSELQALQANGTWTLTSLPTGKTPIGCRWVYKIKHRSDGSI 1067
Query: 621 ERLKARLVAKGYHQVYGVDYMDSFSPVAKLVTVRMLIAVATLKGWPLHQLDINNAFLHGF 442
ER KARLVAKG+ Q+ GVDY D+FSP+AK++TV L+A+A + W LHQLD+NNAFLHG
Sbjct: 1068 ERYKARLVAKGFTQLEGVDYQDTFSPIAKIITVCCLLALAAARRWSLHQLDVNNAFLHGD 1127
Query: 441 LDEAIYMQPPLGYKKARAGE---VCLLKRSLYGLKQASRQWNTEFCSKLTAYGFLQSPHD 271
L E IYM PP G + R GE VC L +SLYGLKQASRQW ++F + A G++QS D
Sbjct: 1128 LHEEIYMSPPPGLR--RQGEENLVCRLHKSLYGLKQASRQWFSKFSKAIQAAGYVQSRAD 1185
Query: 270 SCLFIKHTADTLLFVLIYVDDVLVTGSDIDAISHLKQYLDDLFTIKDLGVANYFLGLELA 91
LF + + +LIYVDD+L+TG+D +I+ +K++L F +KDLG YFLG+E++
Sbjct: 1186 YSLFTRIQGKSFTALLIYVDDILITGNDSMSIAAIKKFLHSQFRLKDLGDLKYFLGIEVS 1245
Query: 90 RTSSGTYLNQRKYVLDILSDMGLL 19
+ +G +++QRKY L+I+ D GLL
Sbjct: 1246 SSKNGIFISQRKYALEIIKDAGLL 1269
Score = 228 bits (582), Expect = 7e-57
Identities = 116/238 (48%), Positives = 154/238 (64%)
Frame = -2
Query: 4704 VATPFPHGLRLIGECGVPLKDPDQYRRLVGRLLYLNLTRPDISFCVQQLSQFVNNPFSTH 4525
+ TP GLRL + + LKDP YRRLVGRL+YL ++RPDI++ V LS+F++ P H
Sbjct: 1274 IDTPMERGLRLSDKSDL-LKDPGHYRRLVGRLIYLTVSRPDITYSVHVLSRFMHQPRKLH 1332
Query: 4524 WDAALHLLRYLKGCXXXXXXXXXXXXXXXXXXSDADWATCKDTRRPITGYCVFLGECLIS 4345
+AAL ++RYLK D+DWA C TRR TGYCVFLG L+S
Sbjct: 1333 MEAALRVVRYLKNAPGQGLFFSSNSDFRLRAYCDSDWAGCPITRRSTTGYCVFLGPSLVS 1392
Query: 4344 WKSKKQTTVSRSSAEAEYRALSTTVCEVQWITFLASDMLLSLPVPIPLYCDNQAALYIVA 4165
W+SK+Q TVS SSAEAEYRA++ CE+ W+ +L D+ + P LYCDN+AAL+I A
Sbjct: 1393 WRSKRQKTVSLSSAEAEYRAMTGACCELTWLRYLLRDLGVLHREPSLLYCDNKAALHITA 1452
Query: 4164 NPVFHERTKHLEIDCHLVRHQYKAGLVLPQKVASSAQLADMFTKLLASPVFSSFLSKL 3991
NPVFHERT+H+E+DCH +R + + G V + V S+ QLAD+ TK L VF+ + KL
Sbjct: 1453 NPVFHERTRHIEMDCHYIRDKIQDGSVATRFVNSAHQLADVLTKALGKEVFTPMIRKL 1510
>ref|XP_010325686.1| PREDICTED: uncharacterized protein LOC104649000 [Solanum
lycopersicum]
Length = 1041
Score = 535 bits (1379), Expect = e-165
Identities = 352/1012 (34%), Positives = 524/1012 (51%), Gaps = 104/1012 (10%)
Frame = -2
Query: 3225 EISTISQGNASVMVYFTRLKRLWDEYSNLLPTPACVCA---GHKQTVEN-DKSTRLMQFL 3058
+I+ +SQG + VY+TR+K+LW+E SNL C CA G K+ + ++ RL+QFL
Sbjct: 51 DINDLSQGVLDITVYYTRMKKLWEELSNLSIKNQCSCACSCGGKEIMHKAEQDQRLIQFL 110
Query: 3057 MGLTDAYEQTRSQILLMDPLPDVNKAYSMVLRIEKQRSVHQGLPDGLEGAAM-----VAN 2893
MGL + Y R IL+M+PLP + +A++++++ EKQR EG++M V +
Sbjct: 111 MGLNEVYIVIRGSILMMNPLPSMAQAFALLVQEEKQREFKPQGQMFAEGSSMNSSVRVGS 170
Query: 2892 TNKYMNQRPGPWSGSKP-----RAQSAPMRKSKEEKAKLICKHCQAPGHEITECFKLVGY 2728
+N + +GS R AP + + C+HC+ GH I +C+KL GY
Sbjct: 171 SNSSCGRSNSTNAGSSTGGRVFRTNYAPNNYPANNRPRPFCEHCKRSGHIIDKCYKLHGY 230
Query: 2727 PDWFRLPKEQ-----------------RGRPMANLVSAEPIQDKKDD----AGVHKGIQT 2611
P+ Q RG+ +A V A+ K D + Q
Sbjct: 231 PNQNNSSNGQGVNQQRYNNVQNQRVYTRGKGVAANVFADSSMGKTDAHTACSANLTNEQC 290
Query: 2610 ADLSNIIQQEFAKLMANMSTGGKDKGGMSFAHFAGYTGKDPSSYQCAFSTFEHLDKGS-- 2437
L N++Q + N+ + +++ A+FAG + S F+ L G
Sbjct: 291 GQLINLLQHLQLEQPENVDS--EEQATCGAANFAGMIACNSSI------DFDKLSCGCLK 342
Query: 2436 -----WIIDTGASRHMCTSLSLLTNLRTISDPITVFMPDGTSKSVTHIGDVFISSDLSLT 2272
WI+D+GA+ HM ++S L+++ + P+ V +P+G VT +GDV I+ ++L
Sbjct: 343 SRTDLWILDSGATHHMTFNISHLSHITDLPYPLLVKLPNGYKVKVTKVGDVRINDIITLF 402
Query: 2271 NVLFVPTFKCNLLSIAQLTQDSNCKCTFYPSHCLFQDLKTDRVMAVGQAVGKLYML---- 2104
VLF+P+FK NL+SI+ L+ NC +F S C Q R + +G+ LY L
Sbjct: 403 RVLFIPSFKYNLISISSLSLHLNCTASFSNSSCTLQGPSMKRPLEIGKEQDGLYFLCSDC 462
Query: 2103 ---------QVTSSVPSSFLQNSLLTTYT--DDSCNT-------------------EQID 2014
Q++SS+ S N + + SC+T + I
Sbjct: 463 LKKDSHSTSQISSSMACSSHNNKIGSQCKCFSHSCSTFCHSCKPSFNSQNAESAVKDTIP 522
Query: 2013 THCNNVLTLWHKRLGHASCNTLK------HLPFLHSLCTETLQHDLKN-----CEVCHIS 1867
++ NN+L L H SC+ L H+PF+ ++ + + C +C +
Sbjct: 523 SNTNNILAGSIPPLSHGSCSDLLWHYRLGHVPFIKMKGITSIPVNFSSKQSFTCNICPMV 582
Query: 1866 KQHRHPFPTSYSCTSAPFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCTSTYLMSHK 1687
+Q R FP TS FEL+HVD+WGP+H T + YF+TLVDD+SR T T+L+S K
Sbjct: 583 RQTRLSFPPKTHNTSKVFELLHVDLWGPYHVST-HDNFKYFITLVDDFSRTTWTHLLSCK 641
Query: 1686 SQVPYLLEKFILMVKNQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQRSCVYTPQQN 1507
S ++++ F+ MV+NQF+ V T RSDNG EFVN + F + GI+HQRSC YTPQQN
Sbjct: 642 SNALHIVKSFVNMVENQFKTSVQTIRSDNGLEFVNQESVLYFQSKGILHQRSCPYTPQQN 701
Query: 1506 GIVERKHRHLLDTARALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTPYEMLYHKA 1327
G+VERKH++LL+TARALLFQSKLP +W +LTATY+INRLPS+ L K P+ +LY++
Sbjct: 702 GVVERKHKYLLETARALLFQSKLPTKYWGECILTATYIINRLPSTYLHNKCPFTILYNQE 761
Query: 1326 PDYSLLKPFGCLAFATNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVTHKFLVTREA 1147
P YS ++ FGCL F T ++KF+PRA +FLGY G KGYK+ +L ++K ++R+
Sbjct: 762 PQYSHMRSFGCLCFPTTHKHQRTKFEPRATPHVFLGYPFGVKGYKVLSLSSNKVHISRDV 821
Query: 1146 YFVESEFP-TYTTDTSPPLPIPPS---------NDTDYFS-TXXXXXXXXXXXXXXXXXX 1000
F E+ FP + T+ S P S ND + S
Sbjct: 822 VFHETVFPFSKITNLSTSNPSSSSTFDSVFLDNNDINLTSLEPEQCDPIETTSLSPNLTP 881
Query: 999 XXXXXXLRKAPRHTSKPARLTDFVT--YSSTTPQ----PTTAFPEALXXXXXXXXXXXXX 838
+RK+ R P L D++T ++S + T+ +P++
Sbjct: 882 SEYDLSIRKSTRIHKPPVYLKDYMTSLHASFSHHHHIASTSLYPDSQSLILSVSHDC--- 938
Query: 837 XXXXXXXXXXXMQEPSSYTQASKDPGWVEAMNKELEALELNNTWVLTTLPQGKSAIGCKW 658
EPSS+ +A+ +P W +AM +EL AL N+TW L +LP GK +GC+W
Sbjct: 939 -------------EPSSFNEAAMNPAWQDAMTQELTALHDNDTWELMSLPAGKKVVGCRW 985
Query: 657 VYKVKRHPDGTVERLKARLVAKGYHQVYGVDYMDSFSPVAKLVTVRMLIAVA 502
VYK+K D ++ER KARLV KGY Q YGVDY ++FSPV K+ TVR+LIA A
Sbjct: 986 VYKIKHKADESIERYKARLVVKGYTQHYGVDYTETFSPVIKMTTVRVLIATA 1037
>ref|XP_010692573.1| PREDICTED: uncharacterized protein LOC104905670 [Beta vulgaris subsp.
vulgaris]
Length = 864
Score = 524 bits (1349), Expect = e-163
Identities = 302/850 (35%), Positives = 462/850 (54%), Gaps = 31/850 (3%)
Frame = -2
Query: 3570 EPLLLHGSDHPGMMLVSSPLTGANYLSWKRSISIALGAKTKLGFINGKIKPPAEESPKFE 3391
+P + D+P LVS+ +G+N++ W R++ AL AK K FI + PAE +
Sbjct: 34 DPFFIANLDNPTSSLVSATFSGSNFMRWSRNVKRALIAKNKECFITRSLPMPAENHRDYS 93
Query: 3390 QWQKVDFMVISWILNSISKEISEAFIYAKSARELWLDIEERFGQSNGPQLYQLQREISTI 3211
+W + D+MV+SWIL+S++ I++ F Y ++ ELW ++ ERFGQSNGP +YQL++EI +
Sbjct: 94 RWTRADYMVMSWILSSMNPNIADDFSYVSNSAELWQELCERFGQSNGPLVYQLKKEIEGL 153
Query: 3210 SQGNASVMVYFTRLKRLWDEYSNLLPTPACVCAGH--------KQTVENDKSTRLMQFLM 3055
Q N +++ Y+ +LK+LWDE L P C C K + + +LMQFL+
Sbjct: 154 RQENLTIIAYYGKLKKLWDELKALRSFPVCNCGALARCSCQFLKNISDLEAEDKLMQFLL 213
Query: 3054 GLTDAYEQTRSQILLMDPLPDVNKAYSMVLRIEKQRSVHQGLPDGLEGAAMVANTNKYMN 2875
GL ++ T + IL M+P+P +NKA+S+ +IEKQ+ + G + E +AM A
Sbjct: 214 GLNSGFDGTITNILSMEPMPTINKAFSITQQIEKQKEI-SGAMEITESSAMAAQRFSQ-- 270
Query: 2874 QRPGPWSGSKPRAQSAPMRKSKEEKAKLICKHCQAPGHEITECFKLVGYPDWFRLPKEQR 2695
G SG + +K K++K C HC+ GH +CF+++GYP+W+ K +
Sbjct: 271 ---GVISGGQRFQARRDWKKEKQDKK---CDHCKGKGHTRDQCFQIIGYPEWYNAIKATK 324
Query: 2694 GR-------------PMANLVSAEPIQDKKDDA----GVHKGIQTADLSNIIQQEFAKLM 2566
G ++ E ++ D G+ G + N I QE K+M
Sbjct: 325 GNLGGFGNGGNKKFAANVHITQEEGMESPLDIDCNMDGISGGQMDQGMMNSICQEVMKIM 384
Query: 2565 ANMSTGGKDKGGMSFAHFAGYTGKDPSSYQCAFSTFEHLDKGSWIIDTGASRHMCTSLSL 2386
G + + + + FA + G S C+ E + SWI+D+GA HM
Sbjct: 385 K----GKQQQSASNSSSFASFAGNVVIS-SCSNLLKEEIC--SWIVDSGACDHMVFDERH 437
Query: 2385 LTNLRTISDPITVFMPDGTSKSVTHIGDVFISSDLSLTNVLFVPTFKCNLLSIAQLTQDS 2206
L N R + I V +PDGT + V G V + L + +VL V FK NLLS+++L + +
Sbjct: 438 LINKRRLDTEIKVGLPDGTCRYVKLTGSVVLDKRLVIHDVLLVEGFKYNLLSVSKLAEKA 497
Query: 2205 NCKCTFYPSHCLFQDLKTDRVMAVGQAVGKLYMLQVTSSVPS-----SFLQNSLLTTYTD 2041
F C FQD + +++ G+ G LY ++ V + S N + +
Sbjct: 498 GILVRFTKDPCYFQDQYSLQILGSGKKQGGLYYYFSSNGVQNNSGMTSACHNVVASCSLP 557
Query: 2040 DSCNTEQIDTHCN-NVLTLWHKRLGHASCNTLKHLPFLHSLCTETLQHDLKNCEVCHISK 1864
+ +I+ + L L H+RLGH S + ++H+ C ++ NC VC SK
Sbjct: 558 NKIAVGRINKESGVDTLELMHRRLGHVSLSKMQHID--DCKCQGLTEY---NCGVCLHSK 612
Query: 1863 QHRHPFPTSYSCTSAPFELVHVDVWGPFHCGTLFWHTPYFLTLVDDYSRCTSTYLMSHKS 1684
H+ PFP S S F+L+H+D+WGP+ L YFLTLVDD++R T TYL+ +K
Sbjct: 613 HHKLPFPVSNSRAECCFDLIHIDLWGPYRVHALNG-ARYFLTLVDDHNRVTWTYLLHNKL 671
Query: 1683 QVPYLLEKFILMVKNQFQCVVNTFRSDNGTEFVNTQCTSLFHNHGIIHQRSCVYTPQQNG 1504
QV + F+ MV QF + RSDNGTE + +C +LF + GI+ QRS Y QQNG
Sbjct: 672 QVAKTICDFLSMVDTQFGKKIKQIRSDNGTEIIKEECLNLFLSKGILMQRSAPYAHQQNG 731
Query: 1503 IVERKHRHLLDTARALLFQSKLPIDFWPFSLLTATYLINRLPSSLLKWKTPYEMLYHKAP 1324
VERKHRHLL+ +RAL FQ+ L FW L TAT+LIN+LP+ +L WK+PYE+++++ P
Sbjct: 732 RVERKHRHLLEVSRALRFQANLSKKFWGECLQTATHLINKLPTKVLSWKSPYEVMFNQKP 791
Query: 1323 DYSLLKPFGCLAFATNILPHKSKFDPRAHKCIFLGYEIGKKGYKLFNLVTHKFLVTREAY 1144
DY+ L+ FGCL +A + + KFD R KCIF+GY G+K Y+L++L +H ++R+
Sbjct: 792 DYTNLRCFGCLCYAYIVHIKRDKFDSRTRKCIFIGYPYGQKAYRLYDLTSHTVFISRDVV 851
Query: 1143 FVESEFPTYT 1114
F++ FP +T
Sbjct: 852 FLKQLFPYHT 861