BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00033164
         (3109 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011101138.1| PREDICTED: cleavage and polyadenylation spec...  1716   0.0  
ref|XP_012858363.1| PREDICTED: cleavage and polyadenylation spec...  1693   0.0  
ref|XP_012858362.1| PREDICTED: cleavage and polyadenylation spec...  1689   0.0  
ref|XP_011101139.1| PREDICTED: cleavage and polyadenylation spec...  1684   0.0  
ref|XP_009593078.1| PREDICTED: cleavage and polyadenylation spec...  1503   0.0  
ref|XP_009593079.1| PREDICTED: cleavage and polyadenylation spec...  1497   0.0  
ref|XP_012484369.1| PREDICTED: cleavage and polyadenylation spec...  1481   0.0  
ref|XP_012484368.1| PREDICTED: cleavage and polyadenylation spec...  1481   0.0  
ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prun...  1477   0.0  
ref|XP_015070075.1| PREDICTED: cleavage and polyadenylation spec...  1474   0.0  
ref|XP_010317467.1| PREDICTED: cleavage and polyadenylation spec...  1474   0.0  
ref|XP_007038473.1| Cleavage and polyadenylation specificity fac...  1474   0.0  
ref|XP_008234350.1| PREDICTED: cleavage and polyadenylation spec...  1472   0.0  
ref|XP_006348057.1| PREDICTED: cleavage and polyadenylation spec...  1470   0.0  
ref|XP_015877866.1| PREDICTED: cleavage and polyadenylation spec...  1462   0.0  
emb|CDP05292.1| unnamed protein product [Coffea canephora]           1462   0.0  
ref|XP_010277399.1| PREDICTED: cleavage and polyadenylation spec...  1461   0.0  
ref|XP_007038475.1| Cleavage and polyadenylation specificity fac...  1457   0.0  
ref|XP_007038474.1| Cleavage and polyadenylation specificity fac...  1457   0.0  
ref|XP_010662375.1| PREDICTED: cleavage and polyadenylation spec...  1456   0.0  

>ref|XP_011101138.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X1 [Sesamum indicum]
          Length = 1451

 Score = 1716 bits (4445), Expect = 0.0
 Identities = 879/1024 (85%), Positives = 916/1024 (89%), Gaps = 4/1024 (0%)
 Frame = -3

Query: 3062 RCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVKDF 2883
            RCA VLVYGLQM++LKAAEASSGLVGE++ ++SG TGASRIESSY    RDLDMKHVKDF
Sbjct: 193  RCAGVLVYGLQMLLLKAAEASSGLVGEENTYNSGSTGASRIESSYNVAFRDLDMKHVKDF 252

Query: 2882 IFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHDAY 2703
            IFIHGYIEPVVVILHEQELTWAGRVSWK HTCMISALSISTTLKQHPLIWSATNLPHDAY
Sbjct: 253  IFIHGYIEPVVVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSATNLPHDAY 312

Query: 2702 KLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAANA 2523
            KLLAVPSPIGGVLVIGANTIHYHSQS SC+LALNNFAVPVDGSQEMPRSGF TELDAANA
Sbjct: 313  KLLAVPSPIGGVLVIGANTIHYHSQSTSCLLALNNFAVPVDGSQEMPRSGFATELDAANA 372

Query: 2522 TWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGSRL 2343
            TWLTNDVAVF           L+YDGRIVQRLELSKSRASVLTSDITT+GNSL FLGSRL
Sbjct: 373  TWLTNDVAVFSAKSGELLLLTLVYDGRIVQRLELSKSRASVLTSDITTVGNSLLFLGSRL 432

Query: 2342 GDSLLVQYNSGVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSFYGT 2166
            GDSLLVQYNSG GAPTL PGVKEEVGDIESDAPL KRLR SSSDALQDLV GEELSFYGT
Sbjct: 433  GDSLLVQYNSGAGAPTLGPGVKEEVGDIESDAPLAKRLRMSSSDALQDLVTGEELSFYGT 492

Query: 2165 GPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGK 1986
            GPNN Q AQK FTFAVRDSLLNVGPLKDFSYGLRINADPNATG+AKQSNYELVCCSGHGK
Sbjct: 493  GPNNPQSAQKTFTFAVRDSLLNVGPLKDFSYGLRINADPNATGVAKQSNYELVCCSGHGK 552

Query: 1985 NGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLRSDSSKGAADEDEYHAYLIISLENR 1806
            NGAL+VLQQSIRP+TITQESLPGCKGIWTVYHKN RSDSSKGAADEDEYHAYLIISLENR
Sbjct: 553  NGALTVLQQSIRPETITQESLPGCKGIWTVYHKNSRSDSSKGAADEDEYHAYLIISLENR 612

Query: 1805 TMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQELSFK 1626
            TMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQI+ARGARILDGAFMTQEL+FK
Sbjct: 613  TMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIYARGARILDGAFMTQELAFK 672

Query: 1625 XXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKV 1446
                       GT+VSSVSIADPYVLLRM DGSIQLLVGD STCSVSVT PP FESS+K+
Sbjct: 673  SSNSEAGAGSDGTIVSSVSIADPYVLLRMVDGSIQLLVGDSSTCSVSVTIPPAFESSNKL 732

Query: 1445 VSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENGNLEIC 1266
            VSACTLYHDKGPEPWLRKTSTDAWLSTG GEAI           DVYCVLCYENGNLE+ 
Sbjct: 733  VSACTLYHDKGPEPWLRKTSTDAWLSTGTGEAIDGADGMIHDQGDVYCVLCYENGNLEMF 792

Query: 1265 DVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSED-VGHGRKEIPHNMKVVE 1089
            DVPN           SGK+HILD F HGPANDPV+LM ++S+D VGHGRKE  H +KVVE
Sbjct: 793  DVPNFSSVFSVDKFVSGKSHILDAFFHGPANDPVQLMKRYSDDAVGHGRKETTHGIKVVE 852

Query: 1088 LSMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKAEG-VXXXXXXXXXXXXXSR 912
            LSMQRW  EHSRPFLFG+LSDGSILCYHAY++EV ENASKAEG V             SR
Sbjct: 853  LSMQRWAQEHSRPFLFGLLSDGSILCYHAYVYEVPENASKAEGVVSSQSSLNLSSISASR 912

Query: 911  LKNLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMFRERLRIH 732
            LKNLRFVRV L+ YAREE PSG SSQRIT+FKNV GLQGLFLSGSRP WFMMFRERLRIH
Sbjct: 913  LKNLRFVRVLLDPYAREEAPSGTSSQRITVFKNVSGLQGLFLSGSRPAWFMMFRERLRIH 972

Query: 731  PQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIALKGTPHQ 552
            PQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQL AL SYDN+WPVQKIALKGTPHQ
Sbjct: 973  PQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLPAL-SYDNYWPVQKIALKGTPHQ 1031

Query: 551  VTYFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFEHD-MSMEGTYLVEEFEVRIME 375
            VTYFAEKNLYPLIVSVPVLKPLNQVLSSL+DQE GNQFEHD +S EGTY VEEFEVRIME
Sbjct: 1032 VTYFAEKNLYPLIVSVPVLKPLNQVLSSLVDQEAGNQFEHDNLSSEGTYPVEEFEVRIME 1091

Query: 374  PERSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGEDVAARGRV 195
            PE+S+GPWQTRATIPMQSSENALTVRVVTLFNTTTQ NETLLAIGTAYVQGEDVAARGRV
Sbjct: 1092 PEKSSGPWQTRATIPMQSSENALTVRVVTLFNTTTQGNETLLAIGTAYVQGEDVAARGRV 1151

Query: 194  LLYSVEKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWTGSELNGVA 15
            LLYSVE+ SDNVQA+VSEVYSKELKGAISALASLQGHLL+ASGPKIILHKWTGSELNGVA
Sbjct: 1152 LLYSVERTSDNVQAKVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGSELNGVA 1211

Query: 14   FYDV 3
            FYDV
Sbjct: 1212 FYDV 1215


>ref|XP_012858363.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X2 [Erythranthe guttata]
            gi|604299650|gb|EYU19493.1| hypothetical protein
            MIMGU_mgv1a000203mg [Erythranthe guttata]
          Length = 1437

 Score = 1693 bits (4385), Expect = 0.0
 Identities = 869/1022 (85%), Positives = 913/1022 (89%), Gaps = 2/1022 (0%)
 Frame = -3

Query: 3062 RCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVKDF 2883
            RCAAVL+YGLQMIVLKAAEASSGLVGE++  +SGP GASRIESSYI GLRDLDMKHVKD 
Sbjct: 190  RCAAVLIYGLQMIVLKAAEASSGLVGEENTSTSGPIGASRIESSYIIGLRDLDMKHVKDI 249

Query: 2882 IFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHDAY 2703
            IF+HGYIEPVVVILHEQELTWAGRVSWK +TCMISALSISTTLKQHPLIWSATNLPHDAY
Sbjct: 250  IFLHGYIEPVVVILHEQELTWAGRVSWKNNTCMISALSISTTLKQHPLIWSATNLPHDAY 309

Query: 2702 KLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAANA 2523
            KLLAVPSPIGGVLVIGANTIHYHSQS+SC+LALNNFAVPVD SQEMPRSGFTTELDAANA
Sbjct: 310  KLLAVPSPIGGVLVIGANTIHYHSQSSSCLLALNNFAVPVDVSQEMPRSGFTTELDAANA 369

Query: 2522 TWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGSRL 2343
            TWLTNDVAVF           L+YDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGSRL
Sbjct: 370  TWLTNDVAVFSSKSGELLLLTLVYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGSRL 429

Query: 2342 GDSLLVQYNSGVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDL-VGEELSFYGT 2166
            GDSLLVQYN GVGAP + PGVKEE GDIESDAPL KRLRRSSSDALQDL VGEELSFY T
Sbjct: 430  GDSLLVQYNFGVGAPIMAPGVKEEGGDIESDAPLPKRLRRSSSDALQDLGVGEELSFYST 489

Query: 2165 GPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGK 1986
            GP NAQL+QK FTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELV CSGHGK
Sbjct: 490  GPTNAQLSQKTFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVSCSGHGK 549

Query: 1985 NGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLRSDSSKGAADEDEYHAYLIISLENR 1806
            NGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLR+DSSKGA DEDEYHAYLIISLENR
Sbjct: 550  NGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLRNDSSKGALDEDEYHAYLIISLENR 609

Query: 1805 TMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQELSFK 1626
            TMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFA GARILDGAFMTQ+LSFK
Sbjct: 610  TMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFASGARILDGAFMTQDLSFK 669

Query: 1625 XXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKV 1446
                       GT+VSSVSIADPYVLLRM+DGSIQLLVGDPSTCSVSVT PPVFESSDK+
Sbjct: 670  SSNSDASSASEGTIVSSVSIADPYVLLRMSDGSIQLLVGDPSTCSVSVTIPPVFESSDKM 729

Query: 1445 VSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENGNLEIC 1266
            V+ACTLYHDKGPE WLR+TSTDAWLSTGIGE+I           DVY VLCYENGNLE+ 
Sbjct: 730  VAACTLYHDKGPELWLRRTSTDAWLSTGIGESIDGADGTTHDQGDVYLVLCYENGNLEMF 789

Query: 1265 DVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDVGHGRKEIPHNMKVVEL 1086
            DVPN           SGK+HILDTF HGPANDPVKLMNK  EDVG GRKE  HN+KVVEL
Sbjct: 790  DVPNFSSVFSVDKFVSGKSHILDTFFHGPANDPVKLMNKDPEDVGRGRKETAHNIKVVEL 849

Query: 1085 SMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKAEGVXXXXXXXXXXXXXSRLK 906
             MQRW+ E SRPFLFGILSDGSILCYHAYI+E S+NASK +               SRL+
Sbjct: 850  CMQRWDAEQSRPFLFGILSDGSILCYHAYIYEDSDNASKTD---------LGSISSSRLR 900

Query: 905  NLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMFRERLRIHPQ 726
            NLRFVRV L++YAREETPSG SSQRI++FKNVGGLQGLFLSGS P WFMMFRERLRIHPQ
Sbjct: 901  NLRFVRVCLDSYAREETPSGTSSQRISVFKNVGGLQGLFLSGSSPAWFMMFRERLRIHPQ 960

Query: 725  VCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIALKGTPHQVT 546
            VCDGPIVAFTVLHNVNCNHGFI ITSEGALKICQL AL SYDN+WPVQK+ALKGTPHQVT
Sbjct: 961  VCDGPIVAFTVLHNVNCNHGFICITSEGALKICQLPAL-SYDNYWPVQKVALKGTPHQVT 1019

Query: 545  YFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFEHD-MSMEGTYLVEEFEVRIMEPE 369
            YFAEKNLYPLIVSVPVLKPLNQVLSSLIDQE GNQFE D  S EGTY +EEFE+RIMEPE
Sbjct: 1020 YFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEAGNQFEPDNFSSEGTYPMEEFEIRIMEPE 1079

Query: 368  RSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGEDVAARGRVLL 189
            +S GPWQTRATIPMQ+SENALT+RVVTLFN+TTQRNETLLAIGTAYVQGEDVAARGRVLL
Sbjct: 1080 KSAGPWQTRATIPMQTSENALTLRVVTLFNSTTQRNETLLAIGTAYVQGEDVAARGRVLL 1139

Query: 188  YSVEKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWTGSELNGVAFY 9
            YSVEK+SD+ Q +V+EVYSKELKGAISALASLQGHLL+ASGPKIILHKWTGSELNGVAFY
Sbjct: 1140 YSVEKSSDSAQTKVTEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGSELNGVAFY 1199

Query: 8    DV 3
            DV
Sbjct: 1200 DV 1201


>ref|XP_012858362.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X1 [Erythranthe guttata]
          Length = 1440

 Score = 1689 bits (4375), Expect = 0.0
 Identities = 870/1025 (84%), Positives = 913/1025 (89%), Gaps = 5/1025 (0%)
 Frame = -3

Query: 3062 RCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVKDF 2883
            RCAAVL+YGLQMIVLKAAEASSGLVGE++  +SGP GASRIESSYI GLRDLDMKHVKD 
Sbjct: 190  RCAAVLIYGLQMIVLKAAEASSGLVGEENTSTSGPIGASRIESSYIIGLRDLDMKHVKDI 249

Query: 2882 IFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHDAY 2703
            IF+HGYIEPVVVILHEQELTWAGRVSWK +TCMISALSISTTLKQHPLIWSATNLPHDAY
Sbjct: 250  IFLHGYIEPVVVILHEQELTWAGRVSWKNNTCMISALSISTTLKQHPLIWSATNLPHDAY 309

Query: 2702 KLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAANA 2523
            KLLAVPSPIGGVLVIGANTIHYHSQS+SC+LALNNFAVPVD SQEMPRSGFTTELDAANA
Sbjct: 310  KLLAVPSPIGGVLVIGANTIHYHSQSSSCLLALNNFAVPVDVSQEMPRSGFTTELDAANA 369

Query: 2522 TWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGSRL 2343
            TWLTNDVAVF           L+YDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGSRL
Sbjct: 370  TWLTNDVAVFSSKSGELLLLTLVYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGSRL 429

Query: 2342 GDSLLVQYNSGVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDL-VGEELSFYGT 2166
            GDSLLVQYN GVGAP + PGVKEE GDIESDAPL KRLRRSSSDALQDL VGEELSFY T
Sbjct: 430  GDSLLVQYNFGVGAPIMAPGVKEEGGDIESDAPLPKRLRRSSSDALQDLGVGEELSFYST 489

Query: 2165 GPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGK 1986
            GP NAQL+QK FTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELV CSGHGK
Sbjct: 490  GPTNAQLSQKTFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVSCSGHGK 549

Query: 1985 NGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLRSDSSKGAADEDEYHAYLIISLENR 1806
            NGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLR+DSSKGA DEDEYHAYLIISLENR
Sbjct: 550  NGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLRNDSSKGALDEDEYHAYLIISLENR 609

Query: 1805 TMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQELSFK 1626
            TMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFA GARILDGAFMTQ+LSFK
Sbjct: 610  TMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFASGARILDGAFMTQDLSFK 669

Query: 1625 XXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKV 1446
                       GT+VSSVSIADPYVLLRM+DGSIQLLVGDPSTCSVSVT PPVFESSDK+
Sbjct: 670  SSNSDASSASEGTIVSSVSIADPYVLLRMSDGSIQLLVGDPSTCSVSVTIPPVFESSDKM 729

Query: 1445 VSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENGNLEIC 1266
            V+ACTLYHDKGPE WLR+TSTDAWLSTGIGE+I           DVY VLCYENGNLE+ 
Sbjct: 730  VAACTLYHDKGPELWLRRTSTDAWLSTGIGESIDGADGTTHDQGDVYLVLCYENGNLEMF 789

Query: 1265 DVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDVGHGRKEIPHNMKVVEL 1086
            DVPN           SGK+HILDTF HGPANDPVKLMNK  EDVG GRKE  HN+KVVEL
Sbjct: 790  DVPNFSSVFSVDKFVSGKSHILDTFFHGPANDPVKLMNKDPEDVGRGRKETAHNIKVVEL 849

Query: 1085 SMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKAEGVXXXXXXXXXXXXXSRLK 906
             MQRW+ E SRPFLFGILSDGSILCYHAYI+E S+NASK +               SRL+
Sbjct: 850  CMQRWDAEQSRPFLFGILSDGSILCYHAYIYEDSDNASKTD---------LGSISSSRLR 900

Query: 905  NLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMFRERLRIHPQ 726
            NLRFVRV L++YAREETPSG SSQRI++FKNVGGLQGLFLSGS P WFMMFRERLRIHPQ
Sbjct: 901  NLRFVRVCLDSYAREETPSGTSSQRISVFKNVGGLQGLFLSGSSPAWFMMFRERLRIHPQ 960

Query: 725  VCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIALKGTPHQVT 546
            VCDGPIVAFTVLHNVNCNHGFI ITSEGALKICQL AL SYDN+WPVQK+ALKGTPHQVT
Sbjct: 961  VCDGPIVAFTVLHNVNCNHGFICITSEGALKICQLPAL-SYDNYWPVQKVALKGTPHQVT 1019

Query: 545  YFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFEHD-MSMEGTYLVEEFEVRIMEPE 369
            YFAEKNLYPLIVSVPVLKPLNQVLSSLIDQE GNQFE D  S EGTY +EEFE+RIMEPE
Sbjct: 1020 YFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEAGNQFEPDNFSSEGTYPMEEFEIRIMEPE 1079

Query: 368  RSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGEDVAARGRVLL 189
            +S GPWQTRATIPMQ+SENALT+RVVTLFN+TTQRNETLLAIGTAYVQGEDVAARGRVLL
Sbjct: 1080 KSAGPWQTRATIPMQTSENALTLRVVTLFNSTTQRNETLLAIGTAYVQGEDVAARGRVLL 1139

Query: 188  YSVEKNSDNVQA---QVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWTGSELNGV 18
            YSVEK+SD+ Q    QV+EVYSKELKGAISALASLQGHLL+ASGPKIILHKWTGSELNGV
Sbjct: 1140 YSVEKSSDSAQTKSFQVTEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGSELNGV 1199

Query: 17   AFYDV 3
            AFYDV
Sbjct: 1200 AFYDV 1204


>ref|XP_011101139.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X2 [Sesamum indicum]
          Length = 1250

 Score = 1684 bits (4360), Expect = 0.0
 Identities = 862/1006 (85%), Positives = 898/1006 (89%), Gaps = 4/1006 (0%)
 Frame = -3

Query: 3008 EASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVKDFIFIHGYIEPVVVILHEQE 2829
            + SSGLVGE++ ++SG TGASRIESSY    RDLDMKHVKDFIFIHGYIEPVVVILHEQE
Sbjct: 10   QLSSGLVGEENTYNSGSTGASRIESSYNVAFRDLDMKHVKDFIFIHGYIEPVVVILHEQE 69

Query: 2828 LTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHDAYKLLAVPSPIGGVLVIGAN 2649
            LTWAGRVSWK HTCMISALSISTTLKQHPLIWSATNLPHDAYKLLAVPSPIGGVLVIGAN
Sbjct: 70   LTWAGRVSWKHHTCMISALSISTTLKQHPLIWSATNLPHDAYKLLAVPSPIGGVLVIGAN 129

Query: 2648 TIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAANATWLTNDVAVFXXXXXXXX 2469
            TIHYHSQS SC+LALNNFAVPVDGSQEMPRSGF TELDAANATWLTNDVAVF        
Sbjct: 130  TIHYHSQSTSCLLALNNFAVPVDGSQEMPRSGFATELDAANATWLTNDVAVFSAKSGELL 189

Query: 2468 XXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGSRLGDSLLVQYNSGVGAPTLT 2289
               L+YDGRIVQRLELSKSRASVLTSDITT+GNSL FLGSRLGDSLLVQYNSG GAPTL 
Sbjct: 190  LLTLVYDGRIVQRLELSKSRASVLTSDITTVGNSLLFLGSRLGDSLLVQYNSGAGAPTLG 249

Query: 2288 PGVKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSFYGTGPNNAQLAQKAFTFAVRD 2112
            PGVKEEVGDIESDAPL KRLR SSSDALQDLV GEELSFYGTGPNN Q AQK FTFAVRD
Sbjct: 250  PGVKEEVGDIESDAPLAKRLRMSSSDALQDLVTGEELSFYGTGPNNPQSAQKTFTFAVRD 309

Query: 2111 SLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGKNGALSVLQQSIRPDTITQ 1932
            SLLNVGPLKDFSYGLRINADPNATG+AKQSNYELVCCSGHGKNGAL+VLQQSIRP+TITQ
Sbjct: 310  SLLNVGPLKDFSYGLRINADPNATGVAKQSNYELVCCSGHGKNGALTVLQQSIRPETITQ 369

Query: 1931 ESLPGCKGIWTVYHKNLRSDSSKGAADEDEYHAYLIISLENRTMVLQTANNLEEVTENVD 1752
            ESLPGCKGIWTVYHKN RSDSSKGAADEDEYHAYLIISLENRTMVLQTANNLEEVTENVD
Sbjct: 370  ESLPGCKGIWTVYHKNSRSDSSKGAADEDEYHAYLIISLENRTMVLQTANNLEEVTENVD 429

Query: 1751 YYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQELSFKXXXXXXXXXXXGTVVSSV 1572
            YYVQGSTIAAGNLFGRRRVIQI+ARGARILDGAFMTQEL+FK           GT+VSSV
Sbjct: 430  YYVQGSTIAAGNLFGRRRVIQIYARGARILDGAFMTQELAFKSSNSEAGAGSDGTIVSSV 489

Query: 1571 SIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGPEPWLRK 1392
            SIADPYVLLRM DGSIQLLVGD STCSVSVT PP FESS+K+VSACTLYHDKGPEPWLRK
Sbjct: 490  SIADPYVLLRMVDGSIQLLVGDSSTCSVSVTIPPAFESSNKLVSACTLYHDKGPEPWLRK 549

Query: 1391 TSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENGNLEICDVPNXXXXXXXXXXXSGK 1212
            TSTDAWLSTG GEAI           DVYCVLCYENGNLE+ DVPN           SGK
Sbjct: 550  TSTDAWLSTGTGEAIDGADGMIHDQGDVYCVLCYENGNLEMFDVPNFSSVFSVDKFVSGK 609

Query: 1211 NHILDTFSHGPANDPVKLMNKHSED-VGHGRKEIPHNMKVVELSMQRWEGEHSRPFLFGI 1035
            +HILD F HGPANDPV+LM ++S+D VGHGRKE  H +KVVELSMQRW  EHSRPFLFG+
Sbjct: 610  SHILDAFFHGPANDPVQLMKRYSDDAVGHGRKETTHGIKVVELSMQRWAQEHSRPFLFGL 669

Query: 1034 LSDGSILCYHAYIFEVSENASKAEG-VXXXXXXXXXXXXXSRLKNLRFVRVALETYAREE 858
            LSDGSILCYHAY++EV ENASKAEG V             SRLKNLRFVRV L+ YAREE
Sbjct: 670  LSDGSILCYHAYVYEVPENASKAEGVVSSQSSLNLSSISASRLKNLRFVRVLLDPYAREE 729

Query: 857  TPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMFRERLRIHPQVCDGPIVAFTVLHNVN 678
             PSG SSQRIT+FKNV GLQGLFLSGSRP WFMMFRERLRIHPQVCDGPIVAFTVLHNVN
Sbjct: 730  APSGTSSQRITVFKNVSGLQGLFLSGSRPAWFMMFRERLRIHPQVCDGPIVAFTVLHNVN 789

Query: 677  CNHGFIYITSEGALKICQLSALSSYDNHWPVQKIALKGTPHQVTYFAEKNLYPLIVSVPV 498
            CNHGFIYITSEGALKICQL AL SYDN+WPVQKIALKGTPHQVTYFAEKNLYPLIVSVPV
Sbjct: 790  CNHGFIYITSEGALKICQLPAL-SYDNYWPVQKIALKGTPHQVTYFAEKNLYPLIVSVPV 848

Query: 497  LKPLNQVLSSLIDQEVGNQFEHD-MSMEGTYLVEEFEVRIMEPERSTGPWQTRATIPMQS 321
            LKPLNQVLSSL+DQE GNQFEHD +S EGTY VEEFEVRIMEPE+S+GPWQTRATIPMQS
Sbjct: 849  LKPLNQVLSSLVDQEAGNQFEHDNLSSEGTYPVEEFEVRIMEPEKSSGPWQTRATIPMQS 908

Query: 320  SENALTVRVVTLFNTTTQRNETLLAIGTAYVQGEDVAARGRVLLYSVEKNSDNVQAQVSE 141
            SENALTVRVVTLFNTTTQ NETLLAIGTAYVQGEDVAARGRVLLYSVE+ SDNVQA+VSE
Sbjct: 909  SENALTVRVVTLFNTTTQGNETLLAIGTAYVQGEDVAARGRVLLYSVERTSDNVQAKVSE 968

Query: 140  VYSKELKGAISALASLQGHLLLASGPKIILHKWTGSELNGVAFYDV 3
            VYSKELKGAISALASLQGHLL+ASGPKIILHKWTGSELNGVAFYDV
Sbjct: 969  VYSKELKGAISALASLQGHLLIASGPKIILHKWTGSELNGVAFYDV 1014


>ref|XP_009593078.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X1 [Nicotiana tomentosiformis]
          Length = 1443

 Score = 1503 bits (3892), Expect = 0.0
 Identities = 770/1031 (74%), Positives = 863/1031 (83%), Gaps = 9/1031 (0%)
 Frame = -3

Query: 3068 QPRCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVK 2889
            Q RCA V  +  QMI+LKAAE +S LVGEDSAFSSG   A RIESSYI  LRDLD++HVK
Sbjct: 182  QGRCAGVFAFEQQMIILKAAEINSSLVGEDSAFSSGGASA-RIESSYIITLRDLDVRHVK 240

Query: 2888 DFIFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHD 2709
            DFIF+HGYIEPV+VILHE+ELTWAGRVSWK HTCM SA SISTTLKQHPLIWSA +LPHD
Sbjct: 241  DFIFLHGYIEPVMVILHERELTWAGRVSWKHHTCMASAFSISTTLKQHPLIWSAVDLPHD 300

Query: 2708 AYKLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAA 2529
            AYKLLAVPSPIGGVLVIGAN+IHYHSQS+SC LALNNFA   D SQEMPRS FT ELDAA
Sbjct: 301  AYKLLAVPSPIGGVLVIGANSIHYHSQSSSCSLALNNFAFFGDSSQEMPRSSFTVELDAA 360

Query: 2528 NATWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGS 2349
            NATWL NDVA+            ++YDGRIVQ+L+LSKSRASVLTS ITTIG+SLFFLGS
Sbjct: 361  NATWLANDVAMLSTKTGELLLLTIMYDGRIVQKLDLSKSRASVLTSGITTIGDSLFFLGS 420

Query: 2348 RLGDSLLVQYNSGVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSFY 2172
            RLGDSLLVQ+  G+G   L PGV+EEVGDIESD P  KRLRRSSSDALQD++ GEELS Y
Sbjct: 421  RLGDSLLVQFTCGLGGSILPPGVQEEVGDIESDTPSAKRLRRSSSDALQDMINGEELSLY 480

Query: 2171 GTGPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGH 1992
            GT PNNAQ AQKAF+FAVRDSL+NVGPLKDF+YGLRINAD NATGIAKQSNYELVCCSGH
Sbjct: 481  GTAPNNAQSAQKAFSFAVRDSLINVGPLKDFAYGLRINADLNATGIAKQSNYELVCCSGH 540

Query: 1991 GKNGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLRS---DSSKGAADEDEYHAYLII 1821
            GKNG+LSVLQQSIRP+ ITQE+LPGCKGIWTVYHK+ RS   +SS+ A +EDEYHAYLII
Sbjct: 541  GKNGSLSVLQQSIRPEMITQEALPGCKGIWTVYHKSARSHLNESSRVADEEDEYHAYLII 600

Query: 1820 SLENRTMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQ 1641
            SLE RTMVLQTANNLEEVTENVDYYVQG+TIAAGNLFGRRRVIQ+FA GARILDGAFMTQ
Sbjct: 601  SLETRTMVLQTANNLEEVTENVDYYVQGNTIAAGNLFGRRRVIQVFAHGARILDGAFMTQ 660

Query: 1640 ELSFKXXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFE 1461
            ELSFK            ++VSSVSIADPYVLLRMT+GSIQLL GDPS+CSVSVT P +FE
Sbjct: 661  ELSFKASNVESGSSSDSSIVSSVSIADPYVLLRMTNGSIQLLAGDPSSCSVSVTVPSIFE 720

Query: 1460 SSDKVVSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENG 1281
            SS K VSACTLYHDKGPEPWLRKTSTDAWLS+G+GEAI           DVYCV+CYENG
Sbjct: 721  SSKKSVSACTLYHDKGPEPWLRKTSTDAWLSSGMGEAIDGADGVTHDQGDVYCVVCYENG 780

Query: 1280 NLEICDVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDV-GHGRKEIPHN 1104
             LEI DVPN           SG+ H++DTF      DPV  + K++EDV G G+ E   +
Sbjct: 781  TLEIFDVPNFSCVFSVDKFVSGRTHLVDTF----IQDPVNGLKKNTEDVMGPGQNENAKD 836

Query: 1103 MK--VVELSMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKAEG-VXXXXXXXX 933
            MK  V EL M RW G +SRPFLFGIL+DG+ILCYHAY+FE SEN+SK +G V        
Sbjct: 837  MKINVAELMMHRWIGLYSRPFLFGILADGTILCYHAYVFEGSENSSKVDGSVSSQNSIGL 896

Query: 932  XXXXXSRLKNLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMF 753
                 SRL+NLRFVRV +E YA+EE PSG  SQR+++FKN+GG QGLFL+GSRP WFM+F
Sbjct: 897  SSTNASRLRNLRFVRVPVENYAKEEMPSGTPSQRMSVFKNIGGSQGLFLTGSRPSWFMVF 956

Query: 752  RERLRIHPQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIA 573
            RERLR+HPQ+CDGPIVA TVLHNVNCNHG IY+T++G LKICQL +  SYDN+WPVQKI 
Sbjct: 957  RERLRVHPQLCDGPIVAVTVLHNVNCNHGLIYVTAQGTLKICQLPSFLSYDNYWPVQKIP 1016

Query: 572  LKGTPHQVTYFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFEHD-MSMEGTYLVEE 396
            LKGTPHQVTYFAEKNLYP+IVSVPVLKPLNQVLS+++DQEVG+QF+ D ++ EG Y +EE
Sbjct: 1017 LKGTPHQVTYFAEKNLYPIIVSVPVLKPLNQVLSTIVDQEVGHQFDPDNINFEGNYPIEE 1076

Query: 395  FEVRIMEPERSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGED 216
            FEVRIMEP++S GPWQTRA+IPMQSSENALTVRVVTL NTTT+ NETLLA+GTAYVQGED
Sbjct: 1077 FEVRIMEPDKSGGPWQTRASIPMQSSENALTVRVVTLLNTTTRENETLLAVGTAYVQGED 1136

Query: 215  VAARGRVLLYSVEKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWTG 36
            VAARGRVLL+S+++N+DN +  VSEVYSKELKGAISALASLQGHLL+ASGPKIILHKWTG
Sbjct: 1137 VAARGRVLLFSIDRNADNSRTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTG 1196

Query: 35   SELNGVAFYDV 3
            SELNGVAF DV
Sbjct: 1197 SELNGVAFCDV 1207


>ref|XP_009593079.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X2 [Nicotiana tomentosiformis]
          Length = 1442

 Score = 1497 bits (3875), Expect = 0.0
 Identities = 769/1031 (74%), Positives = 862/1031 (83%), Gaps = 9/1031 (0%)
 Frame = -3

Query: 3068 QPRCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVK 2889
            Q RCA V  +  QMI+LKAAE +S LVGEDSAFSSG   A RIESSYI  LRDLD++HVK
Sbjct: 182  QGRCAGVFAFEQQMIILKAAEINSSLVGEDSAFSSGGASA-RIESSYIITLRDLDVRHVK 240

Query: 2888 DFIFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHD 2709
            DFIF+HGYIEPV+VILHE+ELTWAGRVSWK HTCM SA SISTTLKQHPLIWSA +LPHD
Sbjct: 241  DFIFLHGYIEPVMVILHERELTWAGRVSWKHHTCMASAFSISTTLKQHPLIWSAVDLPHD 300

Query: 2708 AYKLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAA 2529
            AYKLLAVPSPIGGVLVIGAN+IHYHSQS+SC LALNNFA   D SQEMPRS FT ELDAA
Sbjct: 301  AYKLLAVPSPIGGVLVIGANSIHYHSQSSSCSLALNNFAFFGDSSQEMPRSSFTVELDAA 360

Query: 2528 NATWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGS 2349
            NATWL NDVA+            ++YDGRIVQ+L+LSKSRASVLTS ITTIG+SLFFLGS
Sbjct: 361  NATWLANDVAMLSTKTGELLLLTIMYDGRIVQKLDLSKSRASVLTSGITTIGDSLFFLGS 420

Query: 2348 RLGDSLLVQYNSGVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSFY 2172
            RLGDSLLVQ+  G+G   L PGV+EEVGDIESD P  KRLRRSSSDALQD++ GEELS Y
Sbjct: 421  RLGDSLLVQFTCGLGGSILPPGVQEEVGDIESDTPSAKRLRRSSSDALQDMINGEELSLY 480

Query: 2171 GTGPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGH 1992
            GT PNNAQ AQ AF+FAVRDSL+NVGPLKDF+YGLRINAD NATGIAKQSNYELVCCSGH
Sbjct: 481  GTAPNNAQSAQ-AFSFAVRDSLINVGPLKDFAYGLRINADLNATGIAKQSNYELVCCSGH 539

Query: 1991 GKNGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLRS---DSSKGAADEDEYHAYLII 1821
            GKNG+LSVLQQSIRP+ ITQE+LPGCKGIWTVYHK+ RS   +SS+ A +EDEYHAYLII
Sbjct: 540  GKNGSLSVLQQSIRPEMITQEALPGCKGIWTVYHKSARSHLNESSRVADEEDEYHAYLII 599

Query: 1820 SLENRTMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQ 1641
            SLE RTMVLQTANNLEEVTENVDYYVQG+TIAAGNLFGRRRVIQ+FA GARILDGAFMTQ
Sbjct: 600  SLETRTMVLQTANNLEEVTENVDYYVQGNTIAAGNLFGRRRVIQVFAHGARILDGAFMTQ 659

Query: 1640 ELSFKXXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFE 1461
            ELSFK            ++VSSVSIADPYVLLRMT+GSIQLL GDPS+CSVSVT P +FE
Sbjct: 660  ELSFKASNVESGSSSDSSIVSSVSIADPYVLLRMTNGSIQLLAGDPSSCSVSVTVPSIFE 719

Query: 1460 SSDKVVSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENG 1281
            SS K VSACTLYHDKGPEPWLRKTSTDAWLS+G+GEAI           DVYCV+CYENG
Sbjct: 720  SSKKSVSACTLYHDKGPEPWLRKTSTDAWLSSGMGEAIDGADGVTHDQGDVYCVVCYENG 779

Query: 1280 NLEICDVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDV-GHGRKEIPHN 1104
             LEI DVPN           SG+ H++DTF      DPV  + K++EDV G G+ E   +
Sbjct: 780  TLEIFDVPNFSCVFSVDKFVSGRTHLVDTF----IQDPVNGLKKNTEDVMGPGQNENAKD 835

Query: 1103 MK--VVELSMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKAEG-VXXXXXXXX 933
            MK  V EL M RW G +SRPFLFGIL+DG+ILCYHAY+FE SEN+SK +G V        
Sbjct: 836  MKINVAELMMHRWIGLYSRPFLFGILADGTILCYHAYVFEGSENSSKVDGSVSSQNSIGL 895

Query: 932  XXXXXSRLKNLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMF 753
                 SRL+NLRFVRV +E YA+EE PSG  SQR+++FKN+GG QGLFL+GSRP WFM+F
Sbjct: 896  SSTNASRLRNLRFVRVPVENYAKEEMPSGTPSQRMSVFKNIGGSQGLFLTGSRPSWFMVF 955

Query: 752  RERLRIHPQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIA 573
            RERLR+HPQ+CDGPIVA TVLHNVNCNHG IY+T++G LKICQL +  SYDN+WPVQKI 
Sbjct: 956  RERLRVHPQLCDGPIVAVTVLHNVNCNHGLIYVTAQGTLKICQLPSFLSYDNYWPVQKIP 1015

Query: 572  LKGTPHQVTYFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFEHD-MSMEGTYLVEE 396
            LKGTPHQVTYFAEKNLYP+IVSVPVLKPLNQVLS+++DQEVG+QF+ D ++ EG Y +EE
Sbjct: 1016 LKGTPHQVTYFAEKNLYPIIVSVPVLKPLNQVLSTIVDQEVGHQFDPDNINFEGNYPIEE 1075

Query: 395  FEVRIMEPERSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGED 216
            FEVRIMEP++S GPWQTRA+IPMQSSENALTVRVVTL NTTT+ NETLLA+GTAYVQGED
Sbjct: 1076 FEVRIMEPDKSGGPWQTRASIPMQSSENALTVRVVTLLNTTTRENETLLAVGTAYVQGED 1135

Query: 215  VAARGRVLLYSVEKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWTG 36
            VAARGRVLL+S+++N+DN +  VSEVYSKELKGAISALASLQGHLL+ASGPKIILHKWTG
Sbjct: 1136 VAARGRVLLFSIDRNADNSRTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTG 1195

Query: 35   SELNGVAFYDV 3
            SELNGVAF DV
Sbjct: 1196 SELNGVAFCDV 1206


>ref|XP_012484369.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X2 [Gossypium raimondii]
          Length = 1349

 Score = 1481 bits (3834), Expect = 0.0
 Identities = 751/1031 (72%), Positives = 847/1031 (82%), Gaps = 10/1031 (0%)
 Frame = -3

Query: 3068 QPRCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVK 2889
            Q RC+ VLVYGLQMI+LKAA+A SG VGED AF SG T ++R+ESSYI  LRDLDMKH+K
Sbjct: 81   QGRCSGVLVYGLQMIILKAAQAGSGFVGEDDAFGSGATVSARVESSYIINLRDLDMKHIK 140

Query: 2888 DFIFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHD 2709
            DFIF+HGYIEPV+VILHE+ELTWAGRVSWK HTCMISALSISTTLKQHPLIWSA NLPHD
Sbjct: 141  DFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAANLPHD 200

Query: 2708 AYKLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAA 2529
            AYKLLAVPSPIGGVLVI AN IHYHSQSA+C LALNN+A  VD SQE+PRS F  ELDAA
Sbjct: 201  AYKLLAVPSPIGGVLVISANMIHYHSQSATCALALNNYAASVDNSQELPRSSFNVELDAA 260

Query: 2528 NATWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGS 2349
            NATWL NDVA+            L+YDGR+VQRL+LSKS+ASVLTSDITTIGNSL FLGS
Sbjct: 261  NATWLLNDVALLSAKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSDITTIGNSLVFLGS 320

Query: 2348 RLGDSLLVQYNSGVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLVG-EELSFY 2172
            RLGDSLLVQ++SG GA TL  G+KEEVGDIE D PL KRLRRSSSDALQD VG EELS Y
Sbjct: 321  RLGDSLLVQFSSGSGASTLPSGLKEEVGDIEGDVPLAKRLRRSSSDALQDAVGSEELSLY 380

Query: 2171 GTGPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGH 1992
            G+ PNN++ AQKAF FAVRDSL+NVGPLKDFSYGLRINAD NATGIAKQSNYELVCCSGH
Sbjct: 381  GSTPNNSESAQKAFLFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGH 440

Query: 1991 GKNGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLR---SDSSKGAADEDEYHAYLII 1821
            GKNGAL VL+QSIRP+ IT+  L GCKGIWTVYHK+ R   +DSSK A D+DEYHAYLII
Sbjct: 441  GKNGALCVLRQSIRPEMITEVELTGCKGIWTVYHKSTRGHNADSSKLADDDDEYHAYLII 500

Query: 1820 SLENRTMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQ 1641
            SLE RTMVL+TA+ L EVTE+VDYYVQG TIAAGNLFGRRRVIQ+F RGARILDG+FMTQ
Sbjct: 501  SLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFERGARILDGSFMTQ 560

Query: 1640 ELSFKXXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFE 1461
            ELS              + V SVSIADPYVLLRMTDGSI LLVGDP+TC+VS+ +P  FE
Sbjct: 561  ELSIPLPNSETSSGSDNSTVMSVSIADPYVLLRMTDGSILLLVGDPATCTVSINSPAAFE 620

Query: 1460 SSDKVVSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENG 1281
             S K VSAC+LYHDKGPEPWLRK S+DAWLSTGIGE+I           D+YCV+CYENG
Sbjct: 621  GSKKRVSACSLYHDKGPEPWLRKASSDAWLSTGIGESIDSADGGPHDQGDIYCVICYENG 680

Query: 1280 NLEICDVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDV-GHGRKEIPHN 1104
             LEI DVPN           SG+ H++D +S   +    K +NK SE++ G  RKE  HN
Sbjct: 681  ALEIFDVPNFNCVFSVEKFASGRAHLVDAYSQESSEGSEKPINKSSEELAGQSRKENVHN 740

Query: 1103 MKVVELSMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKAEG-VXXXXXXXXXX 927
            +KVVEL+MQRW G HSRPF+FGIL+DG+ILCYHAY+FE  +NASK EG            
Sbjct: 741  LKVVELAMQRWSGNHSRPFIFGILTDGTILCYHAYLFEGPDNASKVEGSASAQNSVGLSN 800

Query: 926  XXXSRLKNLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMFRE 747
               SRL+NLRF+RV+L+ Y REET +G  SQRITIFKN+ G QG FLSG RP WFM+FR+
Sbjct: 801  VNASRLRNLRFIRVSLDAYTREETSNGTLSQRITIFKNISGYQGFFLSGLRPAWFMVFRQ 860

Query: 746  RLRIHPQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIALK 567
            RLRIHPQ+CDG IVAFTVLHNVNCNHGFIY+TS+G LKICQ+ + S+YDN+WPVQKI L+
Sbjct: 861  RLRIHPQICDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQMPSTSNYDNYWPVQKIPLR 920

Query: 566  GTPHQVTYFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFEH----DMSMEGTYLVE 399
            GTPHQVTYFAE+NLYPLIVSVPV KP+NQVLSSL+DQE G+Q ++       +  TY VE
Sbjct: 921  GTPHQVTYFAERNLYPLIVSVPVHKPVNQVLSSLVDQEAGHQMDNLNLSSDELHRTYTVE 980

Query: 398  EFEVRIMEPERSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGE 219
            EFEVRI+EPE+S GPW+T+ATIPMQSSENALTVRVVTLFNTTT+ NETLLAIGTAYVQGE
Sbjct: 981  EFEVRILEPEKSGGPWETKATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYVQGE 1040

Query: 218  DVAARGRVLLYSVEKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWT 39
            DVAARGRVLL+S+ +++DN Q  VSEVYSKELKGAISALASLQGHLL+ASGPKIILH WT
Sbjct: 1041 DVAARGRVLLFSIGRSTDNNQNLVSEVYSKELKGAISALASLQGHLLIASGPKIILHIWT 1100

Query: 38   GSELNGVAFYD 6
            GSELNG+AFYD
Sbjct: 1101 GSELNGIAFYD 1111


>ref|XP_012484368.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X1 [Gossypium raimondii]
            gi|763767219|gb|KJB34434.1| hypothetical protein
            B456_006G065300 [Gossypium raimondii]
          Length = 1456

 Score = 1481 bits (3834), Expect = 0.0
 Identities = 751/1031 (72%), Positives = 847/1031 (82%), Gaps = 10/1031 (0%)
 Frame = -3

Query: 3068 QPRCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVK 2889
            Q RC+ VLVYGLQMI+LKAA+A SG VGED AF SG T ++R+ESSYI  LRDLDMKH+K
Sbjct: 188  QGRCSGVLVYGLQMIILKAAQAGSGFVGEDDAFGSGATVSARVESSYIINLRDLDMKHIK 247

Query: 2888 DFIFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHD 2709
            DFIF+HGYIEPV+VILHE+ELTWAGRVSWK HTCMISALSISTTLKQHPLIWSA NLPHD
Sbjct: 248  DFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAANLPHD 307

Query: 2708 AYKLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAA 2529
            AYKLLAVPSPIGGVLVI AN IHYHSQSA+C LALNN+A  VD SQE+PRS F  ELDAA
Sbjct: 308  AYKLLAVPSPIGGVLVISANMIHYHSQSATCALALNNYAASVDNSQELPRSSFNVELDAA 367

Query: 2528 NATWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGS 2349
            NATWL NDVA+            L+YDGR+VQRL+LSKS+ASVLTSDITTIGNSL FLGS
Sbjct: 368  NATWLLNDVALLSAKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSDITTIGNSLVFLGS 427

Query: 2348 RLGDSLLVQYNSGVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLVG-EELSFY 2172
            RLGDSLLVQ++SG GA TL  G+KEEVGDIE D PL KRLRRSSSDALQD VG EELS Y
Sbjct: 428  RLGDSLLVQFSSGSGASTLPSGLKEEVGDIEGDVPLAKRLRRSSSDALQDAVGSEELSLY 487

Query: 2171 GTGPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGH 1992
            G+ PNN++ AQKAF FAVRDSL+NVGPLKDFSYGLRINAD NATGIAKQSNYELVCCSGH
Sbjct: 488  GSTPNNSESAQKAFLFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGH 547

Query: 1991 GKNGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLR---SDSSKGAADEDEYHAYLII 1821
            GKNGAL VL+QSIRP+ IT+  L GCKGIWTVYHK+ R   +DSSK A D+DEYHAYLII
Sbjct: 548  GKNGALCVLRQSIRPEMITEVELTGCKGIWTVYHKSTRGHNADSSKLADDDDEYHAYLII 607

Query: 1820 SLENRTMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQ 1641
            SLE RTMVL+TA+ L EVTE+VDYYVQG TIAAGNLFGRRRVIQ+F RGARILDG+FMTQ
Sbjct: 608  SLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFERGARILDGSFMTQ 667

Query: 1640 ELSFKXXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFE 1461
            ELS              + V SVSIADPYVLLRMTDGSI LLVGDP+TC+VS+ +P  FE
Sbjct: 668  ELSIPLPNSETSSGSDNSTVMSVSIADPYVLLRMTDGSILLLVGDPATCTVSINSPAAFE 727

Query: 1460 SSDKVVSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENG 1281
             S K VSAC+LYHDKGPEPWLRK S+DAWLSTGIGE+I           D+YCV+CYENG
Sbjct: 728  GSKKRVSACSLYHDKGPEPWLRKASSDAWLSTGIGESIDSADGGPHDQGDIYCVICYENG 787

Query: 1280 NLEICDVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDV-GHGRKEIPHN 1104
             LEI DVPN           SG+ H++D +S   +    K +NK SE++ G  RKE  HN
Sbjct: 788  ALEIFDVPNFNCVFSVEKFASGRAHLVDAYSQESSEGSEKPINKSSEELAGQSRKENVHN 847

Query: 1103 MKVVELSMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKAEG-VXXXXXXXXXX 927
            +KVVEL+MQRW G HSRPF+FGIL+DG+ILCYHAY+FE  +NASK EG            
Sbjct: 848  LKVVELAMQRWSGNHSRPFIFGILTDGTILCYHAYLFEGPDNASKVEGSASAQNSVGLSN 907

Query: 926  XXXSRLKNLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMFRE 747
               SRL+NLRF+RV+L+ Y REET +G  SQRITIFKN+ G QG FLSG RP WFM+FR+
Sbjct: 908  VNASRLRNLRFIRVSLDAYTREETSNGTLSQRITIFKNISGYQGFFLSGLRPAWFMVFRQ 967

Query: 746  RLRIHPQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIALK 567
            RLRIHPQ+CDG IVAFTVLHNVNCNHGFIY+TS+G LKICQ+ + S+YDN+WPVQKI L+
Sbjct: 968  RLRIHPQICDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQMPSTSNYDNYWPVQKIPLR 1027

Query: 566  GTPHQVTYFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFEH----DMSMEGTYLVE 399
            GTPHQVTYFAE+NLYPLIVSVPV KP+NQVLSSL+DQE G+Q ++       +  TY VE
Sbjct: 1028 GTPHQVTYFAERNLYPLIVSVPVHKPVNQVLSSLVDQEAGHQMDNLNLSSDELHRTYTVE 1087

Query: 398  EFEVRIMEPERSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGE 219
            EFEVRI+EPE+S GPW+T+ATIPMQSSENALTVRVVTLFNTTT+ NETLLAIGTAYVQGE
Sbjct: 1088 EFEVRILEPEKSGGPWETKATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYVQGE 1147

Query: 218  DVAARGRVLLYSVEKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWT 39
            DVAARGRVLL+S+ +++DN Q  VSEVYSKELKGAISALASLQGHLL+ASGPKIILH WT
Sbjct: 1148 DVAARGRVLLFSIGRSTDNNQNLVSEVYSKELKGAISALASLQGHLLIASGPKIILHIWT 1207

Query: 38   GSELNGVAFYD 6
            GSELNG+AFYD
Sbjct: 1208 GSELNGIAFYD 1218


>ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prunus persica]
            gi|462416772|gb|EMJ21509.1| hypothetical protein
            PRUPE_ppa000211mg [Prunus persica]
          Length = 1459

 Score = 1477 bits (3823), Expect = 0.0
 Identities = 750/1032 (72%), Positives = 847/1032 (82%), Gaps = 10/1032 (0%)
 Frame = -3

Query: 3068 QPRCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVK 2889
            Q RC ++LVYGLQMI+LKA++  SGLVG+D +F SG   +SRIESSYI  LRD+DMKHVK
Sbjct: 190  QGRCGSILVYGLQMIILKASQGGSGLVGDDDSFGSGGAISSRIESSYIVNLRDMDMKHVK 249

Query: 2888 DFIFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHD 2709
            DF F+HGYIEPV+VILHE+ELTWAGRVSWK HTCMISALSISTTLKQHPLIWSA NLPHD
Sbjct: 250  DFTFLHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHD 309

Query: 2708 AYKLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAA 2529
            AYKLLAVPSPIGGVLVI AN+IHYHSQSASC LALN++AV  D SQEMPRS FT ELD A
Sbjct: 310  AYKLLAVPSPIGGVLVISANSIHYHSQSASCALALNSYAVSADNSQEMPRSSFTVELDTA 369

Query: 2528 NATWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGS 2349
            NATWL NDVA+            L+YDGR+VQRL+LSKS+ASVLTS IT +GNSLFFLGS
Sbjct: 370  NATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSGITKVGNSLFFLGS 429

Query: 2348 RLGDSLLVQYNSGVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSFY 2172
            RLGDSLLVQ+  GVG   L+  +K+EVGDIE DAPL KRLR SSSDALQD+V GEELS Y
Sbjct: 430  RLGDSLLVQFTCGVGGSVLSSDMKDEVGDIEGDAPLAKRLRMSSSDALQDMVSGEELSLY 489

Query: 2171 GTGPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGH 1992
            G+ PNNA+ AQK+F+FAVRDSL+NVGPLKDFSYGLRINAD NATGIAKQSNYELVCCSGH
Sbjct: 490  GSAPNNAESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGH 549

Query: 1991 GKNGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLR---SDSSKGAADEDEYHAYLII 1821
            GKNGAL VL+QSIRP+ IT+  LPGCKGIWTVYHKN R   +DSSK AA +DE+HAYLII
Sbjct: 550  GKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKNARGHNADSSKIAASDDEFHAYLII 609

Query: 1820 SLENRTMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQ 1641
            SLE RTMVL+TA+ L EVTE+VDY+VQG TIAAGNLFGRRRV+Q++ RGARILDG+FMTQ
Sbjct: 610  SLEARTMVLETADLLSEVTESVDYFVQGRTIAAGNLFGRRRVVQVYERGARILDGSFMTQ 669

Query: 1640 ELSFKXXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFE 1461
            +LSF             + V SVSI DPYVLLRM+DG I+LLVGDPS C+VS + P  FE
Sbjct: 670  DLSFGTSNSEMGSGSESSTVLSVSIVDPYVLLRMSDGGIRLLVGDPSLCTVSTSIPAAFE 729

Query: 1460 SSDKVVSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENG 1281
            SS K +SACTLYHDKGPEPWLRKTSTDAWLSTGI EAI           DVYCV+CYE+G
Sbjct: 730  SSKKSISACTLYHDKGPEPWLRKTSTDAWLSTGIDEAIDGADGVSHDQGDVYCVVCYESG 789

Query: 1280 NLEICDVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDV-GHGRKEIPHN 1104
            +LEI DVPN           SG  H++DT    P  DP KL+NK SE+V G GRKE   N
Sbjct: 790  SLEIFDVPNFNCVFSVDKFVSGNAHLIDTLMRDPPKDPQKLINKSSEEVSGQGRKENIQN 849

Query: 1103 MKVVELSMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKAE-GVXXXXXXXXXX 927
            MKVVEL+MQRW G+HSRPFLFGIL+DG ILCYHAY+FE  E ASK E             
Sbjct: 850  MKVVELAMQRWSGQHSRPFLFGILNDGMILCYHAYLFEGPETASKTEDSASAQNTTGVSN 909

Query: 926  XXXSRLKNLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMFRE 747
               SRL+NLRFVRV L+TYA+++T +  S QR+TIFKN+ G QGLFLSGSRP WFM+FRE
Sbjct: 910  LSASRLRNLRFVRVPLDTYAKKDTSNETSCQRMTIFKNIAGYQGLFLSGSRPAWFMVFRE 969

Query: 746  RLRIHPQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIALK 567
            RLRIHPQ+CDG +VA TVLHNVNCNHG IY+TS+G LKICQL  ++SYDN+WPVQKI LK
Sbjct: 970  RLRIHPQLCDGSVVAVTVLHNVNCNHGLIYVTSQGILKICQLPPITSYDNYWPVQKIPLK 1029

Query: 566  GTPHQVTYFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFE-HDMS---MEGTYLVE 399
            GTPHQVTYFAEKNLYPLIVSVPV KPLNQVLSSL+DQEVG+Q E H++S   +  TY V+
Sbjct: 1030 GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVLSSLVDQEVGHQVENHNLSSDELHRTYSVD 1089

Query: 398  EFEVRIMEPERSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGE 219
            EFE+RIMEP++S GPWQT+ATIPMQ+SENALTVRVVTLFNTTT+ NETLLAIGTAYVQGE
Sbjct: 1090 EFEIRIMEPDKSGGPWQTKATIPMQTSENALTVRVVTLFNTTTKENETLLAIGTAYVQGE 1149

Query: 218  DVAARGRVLLYSVEKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWT 39
            DVA RGRVLL+S  K++DN Q  VSEVYSKELKGAISALASLQGHLL+ASGPKIILHKW 
Sbjct: 1150 DVAGRGRVLLFSAGKSADNTQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWN 1209

Query: 38   GSELNGVAFYDV 3
            G+ELNGVAF+DV
Sbjct: 1210 GTELNGVAFFDV 1221


>ref|XP_015070075.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Solanum pennellii]
          Length = 1447

 Score = 1474 bits (3816), Expect = 0.0
 Identities = 755/1033 (73%), Positives = 858/1033 (83%), Gaps = 12/1033 (1%)
 Frame = -3

Query: 3068 QPRCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVK 2889
            Q RCA V  +  QMIVLKAAE +S L GEDSAFS+G   A RIESSYI  LRDLD++HVK
Sbjct: 183  QGRCAGVFAFEQQMIVLKAAEVNSSLAGEDSAFSAGGASA-RIESSYIITLRDLDVRHVK 241

Query: 2888 DFIFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHD 2709
            DF F+HGYIEPV+VILHE+ELTW+GRVSWK HTCM+SA SISTTLKQHPLIWSATNLPHD
Sbjct: 242  DFTFLHGYIEPVMVILHERELTWSGRVSWKHHTCMVSAFSISTTLKQHPLIWSATNLPHD 301

Query: 2708 AYKLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAA 2529
            AYKLLAVPSPIGGVLVIGANTIHYHSQS+SC LALNNFA   D SQEMPRS    ELDAA
Sbjct: 302  AYKLLAVPSPIGGVLVIGANTIHYHSQSSSCSLALNNFAFFGDNSQEMPRSSINVELDAA 361

Query: 2528 NATWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGS 2349
            NATWLT+DVA+            +IYDGRIVQ+L+LSKSRASVLTS ITTIG+SLFFLGS
Sbjct: 362  NATWLTSDVAMLSTKTGELLLLTIIYDGRIVQKLDLSKSRASVLTSGITTIGDSLFFLGS 421

Query: 2348 RLGDSLLVQYNSGVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSFY 2172
            RLGDSLLVQ++SG+G   L PGV+EEVGDIESDAP  KRLR SSSDALQD++ GEELS Y
Sbjct: 422  RLGDSLLVQFSSGLGGSNLPPGVQEEVGDIESDAPSAKRLRMSSSDALQDMINGEELSLY 481

Query: 2171 GTGPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGH 1992
            GT PNNAQ AQK F+FAVRDSL+NVGPLKDFSYG+RINAD NATGIAKQSNYELVCCSGH
Sbjct: 482  GTAPNNAQSAQKTFSFAVRDSLINVGPLKDFSYGMRINADLNATGIAKQSNYELVCCSGH 541

Query: 1991 GKNGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLR---SDSSKGAADEDEYHAYLII 1821
            GKNG+LSVLQQSIRP+TITQE+LPGCKGIWTVYHKN R   S+SS+ A +EDEYHAYLII
Sbjct: 542  GKNGSLSVLQQSIRPETITQEALPGCKGIWTVYHKNTRIHLSESSRMADEEDEYHAYLII 601

Query: 1820 SLENRTMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQ 1641
            SLE RTMVLQTANNLEEVTENVDYYVQG+T+AAGNLFGRRRVIQ+FA GARILDGAFMTQ
Sbjct: 602  SLEARTMVLQTANNLEEVTENVDYYVQGTTLAAGNLFGRRRVIQVFAHGARILDGAFMTQ 661

Query: 1640 ELSFKXXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFE 1461
            ELSFK            ++V+SVSIADPYVLLRMT+GS+QLLVGDPS+CSVS+T P VFE
Sbjct: 662  ELSFKASNVESGSSSDTSIVASVSIADPYVLLRMTNGSLQLLVGDPSSCSVSLTVPSVFE 721

Query: 1460 SSDKVVSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENG 1281
            SS K +SACTLYHDKGPEPWLRKTSTDAWLS+G+GEAI           DVYCV+CYENG
Sbjct: 722  SSKKSISACTLYHDKGPEPWLRKTSTDAWLSSGMGEAIDGADGVIQDQGDVYCVVCYENG 781

Query: 1280 NLEICDVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSED----VGHGRKEI 1113
            +LEI DVP+           SG+ +++DTF      D V  ++ HSE+    +  G+KE 
Sbjct: 782  SLEIFDVPSFTCVFSVDKFISGRTYLVDTF----MQDSVNGLHAHSENTEDVIRPGQKEN 837

Query: 1112 PHNMK--VVELSMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKAEG-VXXXXX 942
              ++K  VVEL M RW G+HSRPFLFGIL+DG+IL YHAY+FE SE++SK EG V     
Sbjct: 838  SKDVKINVVELMMHRWIGKHSRPFLFGILADGTILSYHAYVFEGSESSSKVEGSVSSQNS 897

Query: 941  XXXXXXXXSRLKNLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWF 762
                    SRL+NLRFVRV ++ YAREE PSG   QR+ ++KN+GG QG+FL+GSRP WF
Sbjct: 898  ISLSSTNASRLRNLRFVRVPVDNYAREEMPSGTQLQRMNVYKNIGGSQGIFLTGSRPSWF 957

Query: 761  MMFRERLRIHPQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQ 582
            M+FRERLRIHPQ+CDGPIVAFTVLHNVNCNHG IY+T+ G LKICQL +  SYDN+WPVQ
Sbjct: 958  MVFRERLRIHPQLCDGPIVAFTVLHNVNCNHGLIYVTALGTLKICQLPSFLSYDNYWPVQ 1017

Query: 581  KIALKGTPHQVTYFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFE-HDMSMEGTYL 405
            KI LKGTPHQV YFAEKN+Y +IVSVPVLKPLNQVLSS+ DQEVG QF+  +++ EG+Y 
Sbjct: 1018 KIPLKGTPHQVAYFAEKNVYSVIVSVPVLKPLNQVLSSIADQEVGQQFDPENLNYEGSYP 1077

Query: 404  VEEFEVRIMEPERSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQ 225
            +EEFEVRI+EPE+S GPW+TRA+IPMQSSENALTVR+VTLFNT T+ NETLLA+GTAYVQ
Sbjct: 1078 IEEFEVRILEPEKSGGPWKTRASIPMQSSENALTVRMVTLFNTKTKENETLLAVGTAYVQ 1137

Query: 224  GEDVAARGRVLLYSVEKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHK 45
            GEDVAARGRVLL+S+++ +DN +  VSEVYSKELKGAI ALASLQGHLL+ASGPKIILHK
Sbjct: 1138 GEDVAARGRVLLFSIDRTADNSRTLVSEVYSKELKGAIPALASLQGHLLIASGPKIILHK 1197

Query: 44   WTGSELNGVAFYD 6
            WTGSELNGVAF D
Sbjct: 1198 WTGSELNGVAFCD 1210


>ref|XP_010317467.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Solanum lycopersicum]
          Length = 1447

 Score = 1474 bits (3816), Expect = 0.0
 Identities = 755/1030 (73%), Positives = 856/1030 (83%), Gaps = 9/1030 (0%)
 Frame = -3

Query: 3068 QPRCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVK 2889
            Q RCA V  +  QMIVLKAAE +S L GEDSAFS+G   A RIESSYI  LRDLD++HVK
Sbjct: 183  QGRCAGVFAFEQQMIVLKAAEVNSSLAGEDSAFSAGGASA-RIESSYIITLRDLDVRHVK 241

Query: 2888 DFIFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHD 2709
            DF F+HGYIEPV+VILHE+ELTW+GRVSWK HTCM+SA SISTTLKQHPLIWSATNLPHD
Sbjct: 242  DFTFLHGYIEPVMVILHERELTWSGRVSWKHHTCMVSAFSISTTLKQHPLIWSATNLPHD 301

Query: 2708 AYKLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAA 2529
            AYKLLAVPSPIGGVLVIGANTIHYHSQS+SC LALNNF    D SQEMPRS    ELDAA
Sbjct: 302  AYKLLAVPSPIGGVLVIGANTIHYHSQSSSCSLALNNFVFFGDNSQEMPRSSINVELDAA 361

Query: 2528 NATWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGS 2349
            NATWLT+DVA+            +IYDGRIVQ+L+LSKSRASVLTS ITTIG+SLFFLGS
Sbjct: 362  NATWLTSDVAMLSTKTGELLLLTIIYDGRIVQKLDLSKSRASVLTSGITTIGDSLFFLGS 421

Query: 2348 RLGDSLLVQYNSGVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSFY 2172
            RLGDSLLVQ++SG+G   L PGV+EEVGDIESDAP  KRLR SSSDALQD++ GEELS Y
Sbjct: 422  RLGDSLLVQFSSGLGGSNLPPGVQEEVGDIESDAPSAKRLRMSSSDALQDMINGEELSLY 481

Query: 2171 GTGPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGH 1992
            GT PNNAQ AQK F+FAVRDSL+NVGPLKDFSYG+RINAD NATGIAKQSNYELVCCSGH
Sbjct: 482  GTAPNNAQSAQKTFSFAVRDSLINVGPLKDFSYGMRINADLNATGIAKQSNYELVCCSGH 541

Query: 1991 GKNGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLR---SDSSKGAADEDEYHAYLII 1821
            GKNG+LSVLQQSIRP+TITQE+LPGCKGIWTVYHKN R   S+SS+ A +EDEYHAYLII
Sbjct: 542  GKNGSLSVLQQSIRPETITQEALPGCKGIWTVYHKNTRIHLSESSRMADEEDEYHAYLII 601

Query: 1820 SLENRTMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQ 1641
            SLE RTMVLQTANNLEEVTENVDYYVQG+T+AAGNLFGRRRVIQ+FA GARILDGAFMTQ
Sbjct: 602  SLEARTMVLQTANNLEEVTENVDYYVQGTTLAAGNLFGRRRVIQVFAHGARILDGAFMTQ 661

Query: 1640 ELSFKXXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFE 1461
            ELSFK            ++V+SVSIADPYVLLRMT+GS+QLLVGDPS+CSVS+T P VFE
Sbjct: 662  ELSFKASNVESGSSSDTSIVASVSIADPYVLLRMTNGSLQLLVGDPSSCSVSLTVPSVFE 721

Query: 1460 SSDKVVSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENG 1281
            SS K +SACTLYHDKGPEPWLRKTSTDAWLS+G+GEAI           DVYCV+CYENG
Sbjct: 722  SSKKSISACTLYHDKGPEPWLRKTSTDAWLSSGMGEAIDGADGVIQDQGDVYCVVCYENG 781

Query: 1280 NLEICDVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDV-GHGRKEIPHN 1104
             LEI DVP+           SG+ +++DTF     N  +   +K++EDV   G+KE   +
Sbjct: 782  TLEIFDVPSFTCVFSVDKFISGRTYLVDTFMQDSVNG-LHAHSKNTEDVIRPGQKENSKD 840

Query: 1103 MK--VVELSMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKAEG-VXXXXXXXX 933
            +K  VVEL M RW G+HSRPFLFGIL+DG+IL YHAY+FE SEN+SK +G V        
Sbjct: 841  VKINVVELMMHRWIGKHSRPFLFGILADGTILSYHAYVFEGSENSSKVDGSVSSQNSISL 900

Query: 932  XXXXXSRLKNLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMF 753
                 SRL+NLRFVRV ++ YAREE PSG   QR+ ++KN+GG QG+FL+GSRP WFM+F
Sbjct: 901  SSTNASRLRNLRFVRVPVDNYAREEMPSGSQLQRMNVYKNIGGSQGIFLTGSRPSWFMVF 960

Query: 752  RERLRIHPQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIA 573
            RERLRIHPQ+CDGPIVAFTVLHNVNCNHG IY+T+ G LKICQL +  SYDN+WPVQKI 
Sbjct: 961  RERLRIHPQLCDGPIVAFTVLHNVNCNHGLIYVTALGTLKICQLPSFLSYDNYWPVQKIP 1020

Query: 572  LKGTPHQVTYFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFEHD-MSMEGTYLVEE 396
            LKGTPHQV YFAEKN+Y +IVSVPVLKPLNQVLSS+ DQEVG QF+ D ++ EG+Y +EE
Sbjct: 1021 LKGTPHQVAYFAEKNVYSVIVSVPVLKPLNQVLSSIADQEVGQQFDPDNLNYEGSYPIEE 1080

Query: 395  FEVRIMEPERSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGED 216
            FEVRI+EPE+S GPW+TRA+IPMQSSENALTVR+VTLFNT T+ NETLLA+GTAYVQGED
Sbjct: 1081 FEVRILEPEKSGGPWKTRASIPMQSSENALTVRMVTLFNTKTKENETLLAVGTAYVQGED 1140

Query: 215  VAARGRVLLYSVEKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWTG 36
            VAARGRVLL+S+++ +DN +  VSEVYSKELKGAI ALASLQGHLL+ASGPKIILHKWTG
Sbjct: 1141 VAARGRVLLFSIDRTADNSRTLVSEVYSKELKGAIPALASLQGHLLIASGPKIILHKWTG 1200

Query: 35   SELNGVAFYD 6
            SELNGVAF D
Sbjct: 1201 SELNGVAFCD 1210


>ref|XP_007038473.1| Cleavage and polyadenylation specificity factor 160 isoform 1
            [Theobroma cacao] gi|508775718|gb|EOY22974.1| Cleavage
            and polyadenylation specificity factor 160 isoform 1
            [Theobroma cacao]
          Length = 1457

 Score = 1474 bits (3815), Expect = 0.0
 Identities = 743/1031 (72%), Positives = 847/1031 (82%), Gaps = 10/1031 (0%)
 Frame = -3

Query: 3068 QPRCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVK 2889
            Q RC  VLVY LQMI+LKA++A SG VGED AF SG   ++R+ESSYI  LRDLD+KH+K
Sbjct: 188  QGRCGGVLVYDLQMIILKASQAGSGFVGEDDAFGSGGAVSARVESSYIINLRDLDVKHIK 247

Query: 2888 DFIFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHD 2709
            DFIF+HGYIEPV+VILHE+ELTWAGRVSWK HTCMISALSISTTLKQHPLIWSA NLPHD
Sbjct: 248  DFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHD 307

Query: 2708 AYKLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAA 2529
            AYKLLAVPSPIGGVLVI ANTIHYHSQSASC LALNN+A+ VD SQ++PRS F+ ELDAA
Sbjct: 308  AYKLLAVPSPIGGVLVISANTIHYHSQSASCALALNNYAISVDNSQDLPRSNFSVELDAA 367

Query: 2528 NATWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGS 2349
            NATWL NDVA+            LIYDGR+VQRL+LSKS+ASVLTSDITTIGNSLFFLGS
Sbjct: 368  NATWLLNDVALLSTKTGELLLLTLIYDGRVVQRLDLSKSKASVLTSDITTIGNSLFFLGS 427

Query: 2348 RLGDSLLVQYNSGVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSFY 2172
            RLGDSLLVQ++ G G   L  G+KEEVGDIE D PL KRLRRSSSDALQD+V GEELS Y
Sbjct: 428  RLGDSLLVQFSGGSGVSALPSGLKEEVGDIEGDVPLAKRLRRSSSDALQDMVGGEELSLY 487

Query: 2171 GTGPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGH 1992
            G+ PNN + AQK F FAVRDSL NVGPLKDFSYGLRINAD NATGIAKQSNYELVCCSGH
Sbjct: 488  GSAPNNTESAQKTFLFAVRDSLTNVGPLKDFSYGLRINADVNATGIAKQSNYELVCCSGH 547

Query: 1991 GKNGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLRS---DSSKGAADEDEYHAYLII 1821
            GKNGAL VL+QSIRP+ IT+  L GCKGIWTVYHK+ RS   D SK   D+DEYHAYLII
Sbjct: 548  GKNGALCVLRQSIRPEMITEVELTGCKGIWTVYHKSTRSHSADLSKVTDDDDEYHAYLII 607

Query: 1820 SLENRTMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQ 1641
            SLE RTMVL+TA+ L EVTE+VDYYVQG TIAAGNLFGRRRV+Q++ RGARILDG+FMTQ
Sbjct: 608  SLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVVQVYERGARILDGSFMTQ 667

Query: 1640 ELSFKXXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFE 1461
            ELS              + V SVSIADPYVLLRMTDGSI LLVGDP+TC+VS+ TP  FE
Sbjct: 668  ELSIPSPNSESSPGSENSTVISVSIADPYVLLRMTDGSILLLVGDPATCTVSINTPTAFE 727

Query: 1460 SSDKVVSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENG 1281
             S K+VSACTLYHDKGPEPWLRK STDAWLSTG+GE+I           D+YCV+CYE+G
Sbjct: 728  GSKKMVSACTLYHDKGPEPWLRKASTDAWLSTGVGESIDGADGGPHDQGDIYCVVCYESG 787

Query: 1280 NLEICDVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDV-GHGRKEIPHN 1104
             LEI DVPN           SG+  ++D ++   + D  K++NK SE++ G GRKE   N
Sbjct: 788  ALEIFDVPNFNCVFSMEKFASGRTRLVDAYTLESSKDSEKVINKSSEELTGQGRKENVQN 847

Query: 1103 MKVVELSMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKAE-GVXXXXXXXXXX 927
            +KVVEL+MQRW   HSRPFLFGIL+DG+ILCYHAY+FE SENASK E  V          
Sbjct: 848  LKVVELAMQRWSANHSRPFLFGILTDGTILCYHAYLFEGSENASKVEDSVVAQNSVGLSN 907

Query: 926  XXXSRLKNLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMFRE 747
               SRL+NLRF+R+ L+ Y REE  +G  SQRITIFKN+ G QG FLSGSRP WFM+FRE
Sbjct: 908  INASRLRNLRFIRIPLDAYTREEMSNGTLSQRITIFKNISGYQGFFLSGSRPAWFMVFRE 967

Query: 746  RLRIHPQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIALK 567
            RLR+HPQ+CDG IVAFTVLHNVNCNHGFIY+TS+G LKICQ+ + S+YDN+WPVQKI L+
Sbjct: 968  RLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQIPSASNYDNYWPVQKIPLR 1027

Query: 566  GTPHQVTYFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFE-HDMS---MEGTYLVE 399
            GTPHQVTYFAE+NLYP+IVSVPV KP+NQVLSSL+DQEVG+Q + H++S   ++ TY V+
Sbjct: 1028 GTPHQVTYFAERNLYPIIVSVPVHKPVNQVLSSLVDQEVGHQMDNHNLSSDELQRTYTVD 1087

Query: 398  EFEVRIMEPERSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGE 219
            EFEVRI+EPE+S GPW+T+ATIPMQSSENALTVRVVTLFNTTT+ NE+LLAIGTAY+QGE
Sbjct: 1088 EFEVRILEPEKSGGPWETKATIPMQSSENALTVRVVTLFNTTTKENESLLAIGTAYIQGE 1147

Query: 218  DVAARGRVLLYSVEKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWT 39
            DVAARGRV+L S+ +N+DN+Q  VSEVYSKELKGAISALASLQGHLL+ASGPKIILH WT
Sbjct: 1148 DVAARGRVILCSIGRNTDNLQNLVSEVYSKELKGAISALASLQGHLLIASGPKIILHNWT 1207

Query: 38   GSELNGVAFYD 6
            GSELNG+AFYD
Sbjct: 1208 GSELNGIAFYD 1218


>ref|XP_008234350.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Prunus mume]
          Length = 1459

 Score = 1472 bits (3810), Expect = 0.0
 Identities = 748/1032 (72%), Positives = 846/1032 (81%), Gaps = 10/1032 (0%)
 Frame = -3

Query: 3068 QPRCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVK 2889
            Q RC ++LVYGLQMI+LKA++  SGLVG+D +F SG   ++RIESSYI  LRD+DMKHVK
Sbjct: 190  QGRCGSILVYGLQMIILKASQGGSGLVGDDDSFGSGGAISARIESSYIVNLRDMDMKHVK 249

Query: 2888 DFIFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHD 2709
            DF F+HGYIEPV+VILHEQELTWAGRVSWK HTCMISALSISTTLKQHPLIWSA NLPHD
Sbjct: 250  DFTFLHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHD 309

Query: 2708 AYKLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAA 2529
            AYKLLAVPSPIGGVLVI AN+IHYHSQSASC LALN++AV  D SQE+PRS F  ELDAA
Sbjct: 310  AYKLLAVPSPIGGVLVISANSIHYHSQSASCALALNSYAVSADNSQEVPRSSFPVELDAA 369

Query: 2528 NATWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGS 2349
            NATWL NDVA+            L+YDGR+VQRL+LSKS+ASVLTS IT +GNSLFFLGS
Sbjct: 370  NATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSGITKVGNSLFFLGS 429

Query: 2348 RLGDSLLVQYNSGVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSFY 2172
            RLGDSLLVQ+  GVG   L+  +K+EVGDIE DAP  KRLR SSSDALQD+V GEELS Y
Sbjct: 430  RLGDSLLVQFTCGVGGSVLSSDMKDEVGDIEGDAPSAKRLRMSSSDALQDMVSGEELSLY 489

Query: 2171 GTGPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGH 1992
            G+ PNNA+ AQK+F+FAVRDSL+NVGPLKDFSYGLRINAD NATGIAKQSNYELVCCSGH
Sbjct: 490  GSAPNNAESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGH 549

Query: 1991 GKNGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLR---SDSSKGAADEDEYHAYLII 1821
            GKNGAL VL+QSIRP+ IT+  LPGCKGIWTVYHKN R   +DSSK AA +DEYHAYLII
Sbjct: 550  GKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKNARGHNADSSKIAASDDEYHAYLII 609

Query: 1820 SLENRTMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQ 1641
            SLE RTMVL+TA+ L EVTE+VDY+VQG TIAAGNLFGRRRV+Q++ RGARILDG+FMTQ
Sbjct: 610  SLEARTMVLETADLLSEVTESVDYFVQGRTIAAGNLFGRRRVVQVYERGARILDGSFMTQ 669

Query: 1640 ELSFKXXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFE 1461
            +LSF             + V SVSI DPYVLLRM+DG I+LLVGDPS C+VS++ P  FE
Sbjct: 670  DLSFGTSNSEMGTGSESSTVLSVSIVDPYVLLRMSDGGIRLLVGDPSLCTVSISIPAAFE 729

Query: 1460 SSDKVVSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENG 1281
            SS K +SACTLYHDKGPEPWLRKTSTDAWLSTGI EAI           DVYCV+CYE+G
Sbjct: 730  SSTKSISACTLYHDKGPEPWLRKTSTDAWLSTGIDEAIDGADGVSHDQGDVYCVVCYESG 789

Query: 1280 NLEICDVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDV-GHGRKEIPHN 1104
            +LEI DVPN           SG  H++D     P  DP KL+NK SE+V G GRKE   N
Sbjct: 790  SLEIFDVPNFNCVFSVDKFVSGNAHLVDALMRDPPKDPQKLINKSSEEVSGQGRKENIQN 849

Query: 1103 MKVVELSMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKAE-GVXXXXXXXXXX 927
            MKVVEL+MQRW G+HSRPFLFGIL+DG ILCYHAY+FE  E ASK E             
Sbjct: 850  MKVVELAMQRWLGQHSRPFLFGILNDGMILCYHAYLFEDPETASKTEDSASAQNTAGVSN 909

Query: 926  XXXSRLKNLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMFRE 747
               SRL+NLRFVRV L+TYA+++T +  S QR+TIFKN+ G QGLFLSGSRP WFM+FRE
Sbjct: 910  LNASRLRNLRFVRVPLDTYAKKDTSNETSCQRMTIFKNIAGYQGLFLSGSRPAWFMVFRE 969

Query: 746  RLRIHPQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIALK 567
            RLRIHPQ+CDG +VA TVLHNVNCNHG IY+TS+G LKICQL  ++SYDN+WPVQKI LK
Sbjct: 970  RLRIHPQLCDGSVVAVTVLHNVNCNHGLIYVTSQGILKICQLPPITSYDNYWPVQKIPLK 1029

Query: 566  GTPHQVTYFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFE-HDMS---MEGTYLVE 399
            GTPHQVTYFAEKNLYPLIVSVPV KPLNQVLSSL+DQEVG+Q E H++S   +  TY V+
Sbjct: 1030 GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVLSSLVDQEVGHQVENHNLSSDELHRTYSVD 1089

Query: 398  EFEVRIMEPERSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGE 219
            EFE+RIMEP++S GPWQT+ATIPMQ+SENALTVRVVTLFNTTT+ NETLLAIGTAYVQGE
Sbjct: 1090 EFEIRIMEPDKSGGPWQTKATIPMQTSENALTVRVVTLFNTTTKENETLLAIGTAYVQGE 1149

Query: 218  DVAARGRVLLYSVEKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWT 39
            DVA RGRVLL+S  K++DN Q  VSEVYSKELKGAISALASLQGHLL+ASGPKIILHKW 
Sbjct: 1150 DVAGRGRVLLFSAGKSADNTQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWN 1209

Query: 38   GSELNGVAFYDV 3
            G+ELNGVAF+DV
Sbjct: 1210 GTELNGVAFFDV 1221


>ref|XP_006348057.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Solanum tuberosum]
          Length = 1447

 Score = 1470 bits (3806), Expect = 0.0
 Identities = 754/1030 (73%), Positives = 854/1030 (82%), Gaps = 9/1030 (0%)
 Frame = -3

Query: 3068 QPRCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVK 2889
            Q RCA V  +  QMIVLKAAE +S L GEDSAFS+G   A RIESSYI  LRDLD++HVK
Sbjct: 183  QGRCAGVFAFEQQMIVLKAAEVNSSLAGEDSAFSAGGASA-RIESSYIITLRDLDVRHVK 241

Query: 2888 DFIFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHD 2709
            DF F+HGYIEPV+VILHE+ELTW+GRVSWK HTCM+SA SISTTLKQHPLIWSA NLPHD
Sbjct: 242  DFTFLHGYIEPVMVILHERELTWSGRVSWKHHTCMVSAFSISTTLKQHPLIWSAANLPHD 301

Query: 2708 AYKLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAA 2529
            AYKLLAVPSPIGGVLVIGANTIHYHSQS+SC LALNNFA   D SQEMPRS F  ELDAA
Sbjct: 302  AYKLLAVPSPIGGVLVIGANTIHYHSQSSSCSLALNNFAFFGDNSQEMPRSSFNVELDAA 361

Query: 2528 NATWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGS 2349
            NATWLT+DVA+            +IYDGRIVQ+L+LSKSRASVLTS ITTIG+SLFFLGS
Sbjct: 362  NATWLTSDVAMLSTKTGELLLLTIIYDGRIVQKLDLSKSRASVLTSGITTIGDSLFFLGS 421

Query: 2348 RLGDSLLVQYNSGVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSFY 2172
            RLGDSLLVQ++ G+G   L PGV+EEVGDIESDAP  KRLR SSSDALQD++ GEELS Y
Sbjct: 422  RLGDSLLVQFSCGLGGSNLPPGVQEEVGDIESDAPSAKRLRMSSSDALQDMINGEELSLY 481

Query: 2171 GTGPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGH 1992
            GT PNNAQ AQK F+FAVRDSL+NVGPLKDFSYG+RINAD NATGIAKQSNYELVCCSGH
Sbjct: 482  GTAPNNAQSAQKTFSFAVRDSLINVGPLKDFSYGMRINADLNATGIAKQSNYELVCCSGH 541

Query: 1991 GKNGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLR---SDSSKGAADEDEYHAYLII 1821
            GKNG+L VLQQSIRP+TITQE+LPGCKGIWTVYHKN R   S+SS+ A +EDEYHAYLII
Sbjct: 542  GKNGSLCVLQQSIRPETITQEALPGCKGIWTVYHKNTRIHLSESSRMADEEDEYHAYLII 601

Query: 1820 SLENRTMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQ 1641
            SLE RTMVLQTANNLEEVTENVDYYVQG+T+AAGNLFGRRRVIQ+FA GARILDGAFMTQ
Sbjct: 602  SLEARTMVLQTANNLEEVTENVDYYVQGTTLAAGNLFGRRRVIQVFAHGARILDGAFMTQ 661

Query: 1640 ELSFKXXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFE 1461
            ELSFK            ++V+SVSIADPYVLLRMT+GS+QLLVGDPS+CSVS+T P VFE
Sbjct: 662  ELSFKASNVESGSSSDTSIVASVSIADPYVLLRMTNGSLQLLVGDPSSCSVSLTVPSVFE 721

Query: 1460 SSDKVVSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENG 1281
            SS K +SACTLYHDKGPEPWLRKTSTDAWLS+G+GEAI           DVYCV+CYENG
Sbjct: 722  SSKKSISACTLYHDKGPEPWLRKTSTDAWLSSGMGEAIDGADGVTQDQGDVYCVVCYENG 781

Query: 1280 NLEICDVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDV-GHGRKEIPHN 1104
             LEI DVPN           SG+ +++DTF     N  +   +K++EDV   G+KE   +
Sbjct: 782  TLEIFDVPNFTCVFSVDKFISGRTYLVDTFMQDSVNG-LHAHSKNTEDVIRPGQKENSKD 840

Query: 1103 MK--VVELSMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKAEG-VXXXXXXXX 933
            +K  VVEL M RW G+HSRPFLFGIL+DG+IL YHAY+FE SEN+SK EG V        
Sbjct: 841  VKINVVELMMHRWIGKHSRPFLFGILADGTILSYHAYVFEGSENSSKVEGSVSSQNSISL 900

Query: 932  XXXXXSRLKNLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMF 753
                 SRL+NLRFVRV ++ YAREE PSG   QR+ ++KN+GG QG+FL+GSRP WFM+F
Sbjct: 901  SSTNASRLRNLRFVRVPVDNYAREEMPSGTQLQRMNVYKNIGGSQGIFLTGSRPSWFMVF 960

Query: 752  RERLRIHPQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIA 573
            RERLRIHPQ+CDGPIVAFTVLHNVNCNHG IY+T+ G LKICQL +  SYDN+WPVQKI 
Sbjct: 961  RERLRIHPQLCDGPIVAFTVLHNVNCNHGLIYVTALGTLKICQLPSFLSYDNYWPVQKIP 1020

Query: 572  LKGTPHQVTYFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFEHD-MSMEGTYLVEE 396
            LKGTPHQV YFAEKN+Y +IVSVPVLKPLNQVLS++ DQEVG QF+ D ++ EG+Y +EE
Sbjct: 1021 LKGTPHQVAYFAEKNVYSVIVSVPVLKPLNQVLSTIADQEVGQQFDPDNLNYEGSYPIEE 1080

Query: 395  FEVRIMEPERSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGED 216
            FEVRI+EPE+S G W+TRA+IPMQSSENALTVR+VTL NTTT+ NETLLA+GTAYVQGED
Sbjct: 1081 FEVRIVEPEKSGGLWKTRASIPMQSSENALTVRMVTLLNTTTRENETLLAVGTAYVQGED 1140

Query: 215  VAARGRVLLYSVEKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWTG 36
            VAARGRVLL+S+++ +DN +  VSEVYSKELKGAI ALASLQGHLL+ASGPKIILHKWTG
Sbjct: 1141 VAARGRVLLFSIDRTADNSRTLVSEVYSKELKGAIPALASLQGHLLIASGPKIILHKWTG 1200

Query: 35   SELNGVAFYD 6
            SELNGVAF D
Sbjct: 1201 SELNGVAFCD 1210


>ref|XP_015877866.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Ziziphus jujuba]
          Length = 1453

 Score = 1462 bits (3786), Expect = 0.0
 Identities = 743/1032 (71%), Positives = 848/1032 (82%), Gaps = 10/1032 (0%)
 Frame = -3

Query: 3068 QPRCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVK 2889
            Q RC  VLVY  QMI+LKAA+A SGLV ++   SSG   ++ IESSYI  LRDLDMKH+K
Sbjct: 189  QGRCGGVLVYDFQMIILKAAQAGSGLVVDEDTSSSGGAVSAHIESSYIINLRDLDMKHIK 248

Query: 2888 DFIFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHD 2709
            DFIF+HGYIEPV+VILHE+ELTWAGRV+WK HTCM+SALSISTTLKQHPLIWSA NLPHD
Sbjct: 249  DFIFVHGYIEPVMVILHERELTWAGRVAWKHHTCMVSALSISTTLKQHPLIWSAANLPHD 308

Query: 2708 AYKLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAA 2529
            AYKLLAVPSPIGGVLVIGAN+IHYHSQS SC LALNNFAV VD SQEMPRS F  ELDAA
Sbjct: 309  AYKLLAVPSPIGGVLVIGANSIHYHSQSTSCALALNNFAVSVDSSQEMPRSSFNVELDAA 368

Query: 2528 NATWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGS 2349
            NATWL NDVA+            ++YDGR+VQRL+LSKS+ASVLTS ITTIGNSLFFLGS
Sbjct: 369  NATWLLNDVALLSTKTGELLLLTIVYDGRVVQRLDLSKSKASVLTSGITTIGNSLFFLGS 428

Query: 2348 RLGDSLLVQYNSGVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSFY 2172
            RLGDSLLVQ+  GVG+  ++  +K+EVGDIE DAP  KRLRR SSDA QD+  GEELS Y
Sbjct: 429  RLGDSLLVQFTCGVGSSIMSSALKDEVGDIEGDAPSAKRLRRLSSDASQDMASGEELSLY 488

Query: 2171 GTGPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGH 1992
            G+ PNN + AQK+F+FAVRDSL+NVGP+KDFSYGLR+NAD NATGIAKQSNYELVCCSGH
Sbjct: 489  GSAPNNTESAQKSFSFAVRDSLINVGPIKDFSYGLRVNADTNATGIAKQSNYELVCCSGH 548

Query: 1991 GKNGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLRS---DSSKGAADEDEYHAYLII 1821
            GKNGAL VL+QSIRP+ IT+  LPGCKGIWTVYHK+ R    DS+K AA +DEYHAYLII
Sbjct: 549  GKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSTRGHNVDSAKSAAADDEYHAYLII 608

Query: 1820 SLENRTMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQ 1641
            SLE RTMVL+TA+ L EVTE+VDYYVQG TIAAGNLFGRRRV+Q++ RGARILDG+FMTQ
Sbjct: 609  SLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVVQVYERGARILDGSFMTQ 668

Query: 1640 ELSFKXXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFE 1461
            +LS                V SVSIADPYV+LRMTDGSI+LL+GDPS+C+VS++TP  FE
Sbjct: 669  DLSI--VAANSESGSESATVLSVSIADPYVVLRMTDGSIRLLIGDPSSCTVSISTPAAFE 726

Query: 1460 SSDKVVSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENG 1281
            SS K++SACTLYHD GPEPWLRKTSTDAWLSTG+ EA+           D+YCV+CYE+G
Sbjct: 727  SSKKLISACTLYHDDGPEPWLRKTSTDAWLSTGVDEAVDGADGSLHDQGDIYCVVCYESG 786

Query: 1280 NLEICDVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDV-GHGRKEIPHN 1104
            +LEI DVPN           SGK ++LDT     + DP KLMN+ SEDV G  RKE   N
Sbjct: 787  SLEIYDVPNFNCVFSVEKFISGKMNLLDTLVEEQSKDPQKLMNRSSEDVSGQARKENVQN 846

Query: 1103 MKVVELSMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKAE-GVXXXXXXXXXX 927
            MK+VEL+MQRW G+HSRPFLFGILSDG+ILCYHAY+FE  E+ASK E  V          
Sbjct: 847  MKIVELAMQRWSGQHSRPFLFGILSDGTILCYHAYLFEGPESASKTEDSVSAQSLSGLSN 906

Query: 926  XXXSRLKNLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMFRE 747
               SRL+NLRFVRVAL+TYA+EETP+  S QRI+IFKN+ G QGLFLSGSRP WFM+FRE
Sbjct: 907  NSASRLRNLRFVRVALDTYAKEETPNATSCQRISIFKNIAGYQGLFLSGSRPAWFMVFRE 966

Query: 746  RLRIHPQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIALK 567
            RLR+HPQ+CDG IVAFTVLHNVNCNHG IY+TS+G LKICQL +++SYD++WPVQKI LK
Sbjct: 967  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 1026

Query: 566  GTPHQVTYFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFE-HDMS---MEGTYLVE 399
            GTPHQVTYFAEKNLYPLIVSVPV KPLNQV+SSLIDQEVG+Q E H++S   +  TY V+
Sbjct: 1027 GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 1086

Query: 398  EFEVRIMEPERSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGE 219
            EFEVRI+EPE S GPWQT+ATIPMQ+SENALTVRVVTLFNTTT+ NETLLAIGTAYVQGE
Sbjct: 1087 EFEVRILEPEISGGPWQTKATIPMQTSENALTVRVVTLFNTTTKENETLLAIGTAYVQGE 1146

Query: 218  DVAARGRVLLYSVEKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWT 39
            DVAARGRVLL+S+  N  N+   VSEVY+K+LKGAISALASLQGHLL+ASGPKIILHKWT
Sbjct: 1147 DVAARGRVLLFSIGNNPQNL---VSEVYTKDLKGAISALASLQGHLLMASGPKIILHKWT 1203

Query: 38   GSELNGVAFYDV 3
            G ELN VAF+DV
Sbjct: 1204 GGELNAVAFFDV 1215


>emb|CDP05292.1| unnamed protein product [Coffea canephora]
          Length = 1501

 Score = 1462 bits (3786), Expect = 0.0
 Identities = 756/1076 (70%), Positives = 848/1076 (78%), Gaps = 54/1076 (5%)
 Frame = -3

Query: 3068 QPRCAAVLVYGLQMIVLKAAE--------------------------------------- 3006
            Q RCA VLVYGLQM+VLKAAE                                       
Sbjct: 190  QGRCAGVLVYGLQMVVLKAAEHSLSSGPCMCDNIMMFQELHGYIIVRFWDMLYVSGLSQW 249

Query: 3005 ---------ASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVKDFIFIHGYIEPV 2853
                     A+SGLV ED+A S+G   ++RIESSYI  LRDLDMKH+KDFIFI+GYIEPV
Sbjct: 250  PSYFMKVLDATSGLVSEDNASSAGGAVSARIESSYIISLRDLDMKHIKDFIFINGYIEPV 309

Query: 2852 VVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHDAYKLLAVPSPIG 2673
            +VILHE+ELTWAGRVSWK HTCMISALSISTTL+QHPLIWSATNLPHDAYKLLAVPSPIG
Sbjct: 310  MVILHERELTWAGRVSWKHHTCMISALSISTTLRQHPLIWSATNLPHDAYKLLAVPSPIG 369

Query: 2672 GVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAANATWLTNDVAVF 2493
            GVLV+ ANTIHYHSQS SCVLALNN+AVP+D SQEMPRS F  ELDAANATWLTNDVA+ 
Sbjct: 370  GVLVLCANTIHYHSQSTSCVLALNNYAVPMDSSQEMPRSNFIVELDAANATWLTNDVAML 429

Query: 2492 XXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGSRLGDSLLVQYNS 2313
                       LI+DGRIVQRLELSKSRASVLTS +TT+G+S  FLGSRLGDS+LVQ+  
Sbjct: 430  SAKTGELLLLTLIHDGRIVQRLELSKSRASVLTSGLTTVGSSFVFLGSRLGDSILVQFTC 489

Query: 2312 GVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSFYGTGPNNAQLAQK 2136
            GVG   L  G KEEVGDIE D P  KRLRRSSSDALQD+V GEELS YG+ PNNAQ AQK
Sbjct: 490  GVGVSALPLGAKEEVGDIEGDLPSAKRLRRSSSDALQDMVNGEELSLYGSHPNNAQSAQK 549

Query: 2135 AFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGKNGALSVLQQS 1956
            AF+FAVRDSL NVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGKNGAL VLQ+S
Sbjct: 550  AFSFAVRDSLTNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGKNGALCVLQKS 609

Query: 1955 IRPDTITQESLPGCKGIWTVYHKNLRS---DSSKGAADEDEYHAYLIISLENRTMVLQTA 1785
            IRP+ IT ES+PGCKG+WTVYHKN RS   DSSK  AD+DEYHAYLIISLE RTMVLQ+A
Sbjct: 610  IRPEMITHESIPGCKGVWTVYHKNARSHVVDSSKVTADDDEYHAYLIISLETRTMVLQSA 669

Query: 1784 NNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQELSFKXXXXXXX 1605
            NNLEEVTENVDYY QG TIAAGNLFGRR VIQI+A GAR+LDG FM QEL+F+       
Sbjct: 670  NNLEEVTENVDYYTQGCTIAAGNLFGRRLVIQIYAYGARLLDGGFMVQELNFRPPNSEIG 729

Query: 1604 XXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLY 1425
                   V+SVSIADPYVLLRM DGSI LL+GDPS+C+++ T P VFESS  +++ACTLY
Sbjct: 730  PSSESQKVASVSIADPYVLLRMIDGSIYLLLGDPSSCTLTTTNPEVFESSKNLITACTLY 789

Query: 1424 HDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENGNLEICDVPNXXX 1245
            HDKGPEPWLRKTSTDAWLSTGIGEAI           DVYC++CY++G LEI DVPN   
Sbjct: 790  HDKGPEPWLRKTSTDAWLSTGIGEAIDGSDGASHDLGDVYCIVCYQSGGLEIFDVPNFTC 849

Query: 1244 XXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDVGHGRKEIPHNMKVVELSMQRWEG 1065
                    SGK  ++DTFS  PA    +++    +     RK+    + VVEL+M +W G
Sbjct: 850  VFSVENFASGKAILMDTFSPHPAKSNQEVVQMIEDVNAQERKDNSQKIGVVELAMHKWAG 909

Query: 1064 EHSRPFLFGILSDGSILCYHAYIFEVSENASKAE-GVXXXXXXXXXXXXXSRLKNLRFVR 888
            +HSRPFLFGILSDG+ILCYHA++FE SE  S+ E  V             SRL+NLRF+R
Sbjct: 910  QHSRPFLFGILSDGTILCYHAFVFENSETGSRDEKPVISQNSGNLSSMNGSRLRNLRFIR 969

Query: 887  VALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMFRERLRIHPQVCDGPI 708
            ++L+TYAR+E PSG  S+R+TIFKNVGG QGLFLSGSRP WFMMFRERLR HPQ+CDGPI
Sbjct: 970  ISLDTYARDEIPSGTPSKRLTIFKNVGGFQGLFLSGSRPTWFMMFRERLRTHPQLCDGPI 1029

Query: 707  VAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIALKGTPHQVTYFAEKN 528
            VAFTVLHNVNCNHGFIY+TS+G LKICQL +   YDN+WPVQK  LKGTPHQVTYFAEKN
Sbjct: 1030 VAFTVLHNVNCNHGFIYVTSQGTLKICQLPSSLLYDNYWPVQKTTLKGTPHQVTYFAEKN 1089

Query: 527  LYPLIVSVPVLKPLNQVLSSLIDQEVGNQFEHD-MSMEGTYLVEEFEVRIMEPERSTGPW 351
            LYPLIVS PVLKPLNQVLSSL+DQEVG+Q E++ M+ EG Y VEEFE+RIMEPE S  PW
Sbjct: 1090 LYPLIVSYPVLKPLNQVLSSLVDQEVGHQLENETMNFEGMYPVEEFEIRIMEPENSR-PW 1148

Query: 350  QTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGEDVAARGRVLLYSVEKN 171
            QTRATIPMQSSENALTVR VTLFN TT+ NETLLA+GTAYVQGEDVAARGR+LL+S+E++
Sbjct: 1149 QTRATIPMQSSENALTVRAVTLFNCTTRENETLLAVGTAYVQGEDVAARGRILLFSIERS 1208

Query: 170  SDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWTGSELNGVAFYDV 3
            +DN Q  VSEVY+KELKGAISALASLQGHLL+ASGPKIILH+WTGSELNGVAFYDV
Sbjct: 1209 ADNSQILVSEVYAKELKGAISALASLQGHLLIASGPKIILHEWTGSELNGVAFYDV 1264


>ref|XP_010277399.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Nelumbo nucifera]
          Length = 1457

 Score = 1461 bits (3782), Expect = 0.0
 Identities = 738/1032 (71%), Positives = 844/1032 (81%), Gaps = 11/1032 (1%)
 Frame = -3

Query: 3068 QPRCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVK 2889
            Q RC  VLVY LQMI+LK+A+A  G  G+D A  SG T ++R+ESSY+  LRDLDMKHVK
Sbjct: 188  QGRCGGVLVYDLQMIILKSAQAGYGFAGDDEASGSGSTISARVESSYVISLRDLDMKHVK 247

Query: 2888 DFIFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHD 2709
            DFIF+HGYIEPV+VILHE+ELTWAGRVSWK HTCM+SALSISTTLKQHPLIWSA NLPHD
Sbjct: 248  DFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMVSALSISTTLKQHPLIWSAVNLPHD 307

Query: 2708 AYKLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAA 2529
            AYKLLAVPSPIGGVLVIG+NTIHYHSQS SCVLALNNFAVP+D SQ++PRS F  ELDAA
Sbjct: 308  AYKLLAVPSPIGGVLVIGSNTIHYHSQSVSCVLALNNFAVPLDSSQDIPRSSFNVELDAA 367

Query: 2528 NATWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGS 2349
            NATWL +DVA+            L+YDGR+VQRLELSKS+ASVLTS ITTIGNS FFLGS
Sbjct: 368  NATWLLHDVAILSTKTGELLLLTLVYDGRVVQRLELSKSKASVLTSGITTIGNSFFFLGS 427

Query: 2348 RLGDSLLVQYNSGVGAPTLTPG-VKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSF 2175
            RLGDSLLVQY  G+G  T T G VKEEVGDIE+DAP  KRLRRS SD LQD+V GEELS 
Sbjct: 428  RLGDSLLVQYTCGMGTSTTTSGHVKEEVGDIETDAPSVKRLRRSPSDPLQDIVGGEELSL 487

Query: 2174 YGTGPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSG 1995
            YG+ PNN++  QK F+F VRDSL+NVGPLKDFSYGLR+NADPNATGIAKQSNYELVCCSG
Sbjct: 488  YGSAPNNSESVQKIFSFTVRDSLINVGPLKDFSYGLRLNADPNATGIAKQSNYELVCCSG 547

Query: 1994 HGKNGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLR---SDSSKGAADEDEYHAYLI 1824
            HGKNGAL VLQQSIRP+ IT+  LPGCKGIWTVYHKN R   SDSSK  +++DEYHAYLI
Sbjct: 548  HGKNGALCVLQQSIRPEMITEVELPGCKGIWTVYHKNTRGHNSDSSKMVSEDDEYHAYLI 607

Query: 1823 ISLENRTMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMT 1644
            ISLE+RTMVL+TA+ L EVTE V+YYV GST+ AGNLFGRRRV+QIFARGAR+LDG++MT
Sbjct: 608  ISLESRTMVLETADLLGEVTETVEYYVLGSTVTAGNLFGRRRVVQIFARGARVLDGSYMT 667

Query: 1643 QELSFKXXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVF 1464
            Q++S                VSS SIADPYVLLRM+DGSIQLL+GDPSTC+VSVT P VF
Sbjct: 668  QDISLGSPNPGSSSGSDNLTVSSASIADPYVLLRMSDGSIQLLIGDPSTCTVSVTVPAVF 727

Query: 1463 ESSDKVVSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYEN 1284
            ES  + +SACTLYHDKGPEPWLRKTSTDAWLSTGIGEAI           D+YC++CYE+
Sbjct: 728  ESLKESISACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIDGADGAPSDQGDIYCLVCYES 787

Query: 1283 GNLEICDVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDV-GHGRKEIPH 1107
            G LEI +VP+           SGK H++DT    P+ DP    NK+S+++ G  +KE   
Sbjct: 788  GTLEIFEVPSFKCVFSVDKFVSGKTHLVDTVIGEPSKDPHVSRNKNSDEMAGKVKKENVL 847

Query: 1106 NMKVVELSMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKA-EGVXXXXXXXXX 930
            NMKVVEL+MQRW G+H+RPFLFGIL+DG++ CYHA+++E SEN+ K  E           
Sbjct: 848  NMKVVELAMQRWLGQHTRPFLFGILTDGTVFCYHAFLYEGSENSLKTEEATSLQNSVSLS 907

Query: 929  XXXXSRLKNLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMFR 750
                SRL+NLRFVRV LE+Y REET    + QRITIFKNVGG QGLF+SGSRP WFM+ R
Sbjct: 908  SISTSRLRNLRFVRVPLESYTREETSGLSTCQRITIFKNVGGYQGLFVSGSRPAWFMICR 967

Query: 749  ERLRIHPQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIAL 570
            ERLR+HPQ+CDG IVAFTVLHNVNCNHG IY+TS+G LKICQL ++SSYDN+WPVQKI L
Sbjct: 968  ERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSVSSYDNYWPVQKIPL 1027

Query: 569  KGTPHQVTYFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFEHD----MSMEGTYLV 402
            K TPHQVTYFAEKNLYPLIVS+PV+KPLNQVLSSL+DQE G+Q +HD      +  TY V
Sbjct: 1028 KATPHQVTYFAEKNLYPLIVSIPVVKPLNQVLSSLVDQEGGHQIDHDGLSPDELHRTYTV 1087

Query: 401  EEFEVRIMEPERSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQG 222
            +EFEVRIMEPE+S GPWQT+ TIPMQS E+ALTVR+VTLFNTTT+ NETLLAIGTAYVQG
Sbjct: 1088 DEFEVRIMEPEKSGGPWQTKVTIPMQSCESALTVRMVTLFNTTTKENETLLAIGTAYVQG 1147

Query: 221  EDVAARGRVLLYSVEKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKW 42
            EDVAARGRVLL+S+ +N+DN Q  VSEVYSKELKGAISALASLQGHLL+ASGPKIILHKW
Sbjct: 1148 EDVAARGRVLLFSIGRNTDNPQNLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKW 1207

Query: 41   TGSELNGVAFYD 6
            TG+ELNGVAF+D
Sbjct: 1208 TGTELNGVAFFD 1219


>ref|XP_007038475.1| Cleavage and polyadenylation specificity factor subunit 1 isoform 3
            [Theobroma cacao] gi|508775720|gb|EOY22976.1| Cleavage
            and polyadenylation specificity factor subunit 1 isoform
            3 [Theobroma cacao]
          Length = 1195

 Score = 1457 bits (3771), Expect = 0.0
 Identities = 734/1018 (72%), Positives = 838/1018 (82%), Gaps = 10/1018 (0%)
 Frame = -3

Query: 3029 MIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVKDFIFIHGYIEPVV 2850
            MI+LKA++A SG VGED AF SG   ++R+ESSYI  LRDLD+KH+KDFIF+HGYIEPV+
Sbjct: 1    MIILKASQAGSGFVGEDDAFGSGGAVSARVESSYIINLRDLDVKHIKDFIFVHGYIEPVM 60

Query: 2849 VILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHDAYKLLAVPSPIGG 2670
            VILHE+ELTWAGRVSWK HTCMISALSISTTLKQHPLIWSA NLPHDAYKLLAVPSPIGG
Sbjct: 61   VILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGG 120

Query: 2669 VLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAANATWLTNDVAVFX 2490
            VLVI ANTIHYHSQSASC LALNN+A+ VD SQ++PRS F+ ELDAANATWL NDVA+  
Sbjct: 121  VLVISANTIHYHSQSASCALALNNYAISVDNSQDLPRSNFSVELDAANATWLLNDVALLS 180

Query: 2489 XXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGSRLGDSLLVQYNSG 2310
                      LIYDGR+VQRL+LSKS+ASVLTSDITTIGNSLFFLGSRLGDSLLVQ++ G
Sbjct: 181  TKTGELLLLTLIYDGRVVQRLDLSKSKASVLTSDITTIGNSLFFLGSRLGDSLLVQFSGG 240

Query: 2309 VGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSFYGTGPNNAQLAQKA 2133
             G   L  G+KEEVGDIE D PL KRLRRSSSDALQD+V GEELS YG+ PNN + AQK 
Sbjct: 241  SGVSALPSGLKEEVGDIEGDVPLAKRLRRSSSDALQDMVGGEELSLYGSAPNNTESAQKT 300

Query: 2132 FTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGKNGALSVLQQSI 1953
            F FAVRDSL NVGPLKDFSYGLRINAD NATGIAKQSNYELVCCSGHGKNGAL VL+QSI
Sbjct: 301  FLFAVRDSLTNVGPLKDFSYGLRINADVNATGIAKQSNYELVCCSGHGKNGALCVLRQSI 360

Query: 1952 RPDTITQESLPGCKGIWTVYHKNLRS---DSSKGAADEDEYHAYLIISLENRTMVLQTAN 1782
            RP+ IT+  L GCKGIWTVYHK+ RS   D SK   D+DEYHAYLIISLE RTMVL+TA+
Sbjct: 361  RPEMITEVELTGCKGIWTVYHKSTRSHSADLSKVTDDDDEYHAYLIISLEARTMVLETAD 420

Query: 1781 NLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQELSFKXXXXXXXX 1602
             L EVTE+VDYYVQG TIAAGNLFGRRRV+Q++ RGARILDG+FMTQELS          
Sbjct: 421  LLTEVTESVDYYVQGRTIAAGNLFGRRRVVQVYERGARILDGSFMTQELSIPSPNSESSP 480

Query: 1601 XXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYH 1422
                + V SVSIADPYVLLRMTDGSI LLVGDP+TC+VS+ TP  FE S K+VSACTLYH
Sbjct: 481  GSENSTVISVSIADPYVLLRMTDGSILLLVGDPATCTVSINTPTAFEGSKKMVSACTLYH 540

Query: 1421 DKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENGNLEICDVPNXXXX 1242
            DKGPEPWLRK STDAWLSTG+GE+I           D+YCV+CYE+G LEI DVPN    
Sbjct: 541  DKGPEPWLRKASTDAWLSTGVGESIDGADGGPHDQGDIYCVVCYESGALEIFDVPNFNCV 600

Query: 1241 XXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDV-GHGRKEIPHNMKVVELSMQRWEG 1065
                   SG+  ++D ++   + D  K++NK SE++ G GRKE   N+KVVEL+MQRW  
Sbjct: 601  FSMEKFASGRTRLVDAYTLESSKDSEKVINKSSEELTGQGRKENVQNLKVVELAMQRWSA 660

Query: 1064 EHSRPFLFGILSDGSILCYHAYIFEVSENASKAE-GVXXXXXXXXXXXXXSRLKNLRFVR 888
             HSRPFLFGIL+DG+ILCYHAY+FE SENASK E  V             SRL+NLRF+R
Sbjct: 661  NHSRPFLFGILTDGTILCYHAYLFEGSENASKVEDSVVAQNSVGLSNINASRLRNLRFIR 720

Query: 887  VALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMFRERLRIHPQVCDGPI 708
            + L+ Y REE  +G  SQRITIFKN+ G QG FLSGSRP WFM+FRERLR+HPQ+CDG I
Sbjct: 721  IPLDAYTREEMSNGTLSQRITIFKNISGYQGFFLSGSRPAWFMVFRERLRVHPQLCDGSI 780

Query: 707  VAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIALKGTPHQVTYFAEKN 528
            VAFTVLHNVNCNHGFIY+TS+G LKICQ+ + S+YDN+WPVQKI L+GTPHQVTYFAE+N
Sbjct: 781  VAFTVLHNVNCNHGFIYVTSQGILKICQIPSASNYDNYWPVQKIPLRGTPHQVTYFAERN 840

Query: 527  LYPLIVSVPVLKPLNQVLSSLIDQEVGNQFE-HDMS---MEGTYLVEEFEVRIMEPERST 360
            LYP+IVSVPV KP+NQVLSSL+DQEVG+Q + H++S   ++ TY V+EFEVRI+EPE+S 
Sbjct: 841  LYPIIVSVPVHKPVNQVLSSLVDQEVGHQMDNHNLSSDELQRTYTVDEFEVRILEPEKSG 900

Query: 359  GPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGEDVAARGRVLLYSV 180
            GPW+T+ATIPMQSSENALTVRVVTLFNTTT+ NE+LLAIGTAY+QGEDVAARGRV+L S+
Sbjct: 901  GPWETKATIPMQSSENALTVRVVTLFNTTTKENESLLAIGTAYIQGEDVAARGRVILCSI 960

Query: 179  EKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWTGSELNGVAFYD 6
             +N+DN+Q  VSEVYSKELKGAISALASLQGHLL+ASGPKIILH WTGSELNG+AFYD
Sbjct: 961  GRNTDNLQNLVSEVYSKELKGAISALASLQGHLLIASGPKIILHNWTGSELNGIAFYD 1018


>ref|XP_007038474.1| Cleavage and polyadenylation specificity factor 160 isoform 2
            [Theobroma cacao] gi|508775719|gb|EOY22975.1| Cleavage
            and polyadenylation specificity factor 160 isoform 2
            [Theobroma cacao]
          Length = 1257

 Score = 1457 bits (3771), Expect = 0.0
 Identities = 734/1018 (72%), Positives = 838/1018 (82%), Gaps = 10/1018 (0%)
 Frame = -3

Query: 3029 MIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVKDFIFIHGYIEPVV 2850
            MI+LKA++A SG VGED AF SG   ++R+ESSYI  LRDLD+KH+KDFIF+HGYIEPV+
Sbjct: 1    MIILKASQAGSGFVGEDDAFGSGGAVSARVESSYIINLRDLDVKHIKDFIFVHGYIEPVM 60

Query: 2849 VILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHDAYKLLAVPSPIGG 2670
            VILHE+ELTWAGRVSWK HTCMISALSISTTLKQHPLIWSA NLPHDAYKLLAVPSPIGG
Sbjct: 61   VILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGG 120

Query: 2669 VLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAANATWLTNDVAVFX 2490
            VLVI ANTIHYHSQSASC LALNN+A+ VD SQ++PRS F+ ELDAANATWL NDVA+  
Sbjct: 121  VLVISANTIHYHSQSASCALALNNYAISVDNSQDLPRSNFSVELDAANATWLLNDVALLS 180

Query: 2489 XXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGSRLGDSLLVQYNSG 2310
                      LIYDGR+VQRL+LSKS+ASVLTSDITTIGNSLFFLGSRLGDSLLVQ++ G
Sbjct: 181  TKTGELLLLTLIYDGRVVQRLDLSKSKASVLTSDITTIGNSLFFLGSRLGDSLLVQFSGG 240

Query: 2309 VGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSFYGTGPNNAQLAQKA 2133
             G   L  G+KEEVGDIE D PL KRLRRSSSDALQD+V GEELS YG+ PNN + AQK 
Sbjct: 241  SGVSALPSGLKEEVGDIEGDVPLAKRLRRSSSDALQDMVGGEELSLYGSAPNNTESAQKT 300

Query: 2132 FTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGKNGALSVLQQSI 1953
            F FAVRDSL NVGPLKDFSYGLRINAD NATGIAKQSNYELVCCSGHGKNGAL VL+QSI
Sbjct: 301  FLFAVRDSLTNVGPLKDFSYGLRINADVNATGIAKQSNYELVCCSGHGKNGALCVLRQSI 360

Query: 1952 RPDTITQESLPGCKGIWTVYHKNLRS---DSSKGAADEDEYHAYLIISLENRTMVLQTAN 1782
            RP+ IT+  L GCKGIWTVYHK+ RS   D SK   D+DEYHAYLIISLE RTMVL+TA+
Sbjct: 361  RPEMITEVELTGCKGIWTVYHKSTRSHSADLSKVTDDDDEYHAYLIISLEARTMVLETAD 420

Query: 1781 NLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQELSFKXXXXXXXX 1602
             L EVTE+VDYYVQG TIAAGNLFGRRRV+Q++ RGARILDG+FMTQELS          
Sbjct: 421  LLTEVTESVDYYVQGRTIAAGNLFGRRRVVQVYERGARILDGSFMTQELSIPSPNSESSP 480

Query: 1601 XXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYH 1422
                + V SVSIADPYVLLRMTDGSI LLVGDP+TC+VS+ TP  FE S K+VSACTLYH
Sbjct: 481  GSENSTVISVSIADPYVLLRMTDGSILLLVGDPATCTVSINTPTAFEGSKKMVSACTLYH 540

Query: 1421 DKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENGNLEICDVPNXXXX 1242
            DKGPEPWLRK STDAWLSTG+GE+I           D+YCV+CYE+G LEI DVPN    
Sbjct: 541  DKGPEPWLRKASTDAWLSTGVGESIDGADGGPHDQGDIYCVVCYESGALEIFDVPNFNCV 600

Query: 1241 XXXXXXXSGKNHILDTFSHGPANDPVKLMNKHSEDV-GHGRKEIPHNMKVVELSMQRWEG 1065
                   SG+  ++D ++   + D  K++NK SE++ G GRKE   N+KVVEL+MQRW  
Sbjct: 601  FSMEKFASGRTRLVDAYTLESSKDSEKVINKSSEELTGQGRKENVQNLKVVELAMQRWSA 660

Query: 1064 EHSRPFLFGILSDGSILCYHAYIFEVSENASKAE-GVXXXXXXXXXXXXXSRLKNLRFVR 888
             HSRPFLFGIL+DG+ILCYHAY+FE SENASK E  V             SRL+NLRF+R
Sbjct: 661  NHSRPFLFGILTDGTILCYHAYLFEGSENASKVEDSVVAQNSVGLSNINASRLRNLRFIR 720

Query: 887  VALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMFRERLRIHPQVCDGPI 708
            + L+ Y REE  +G  SQRITIFKN+ G QG FLSGSRP WFM+FRERLR+HPQ+CDG I
Sbjct: 721  IPLDAYTREEMSNGTLSQRITIFKNISGYQGFFLSGSRPAWFMVFRERLRVHPQLCDGSI 780

Query: 707  VAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIALKGTPHQVTYFAEKN 528
            VAFTVLHNVNCNHGFIY+TS+G LKICQ+ + S+YDN+WPVQKI L+GTPHQVTYFAE+N
Sbjct: 781  VAFTVLHNVNCNHGFIYVTSQGILKICQIPSASNYDNYWPVQKIPLRGTPHQVTYFAERN 840

Query: 527  LYPLIVSVPVLKPLNQVLSSLIDQEVGNQFE-HDMS---MEGTYLVEEFEVRIMEPERST 360
            LYP+IVSVPV KP+NQVLSSL+DQEVG+Q + H++S   ++ TY V+EFEVRI+EPE+S 
Sbjct: 841  LYPIIVSVPVHKPVNQVLSSLVDQEVGHQMDNHNLSSDELQRTYTVDEFEVRILEPEKSG 900

Query: 359  GPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGEDVAARGRVLLYSV 180
            GPW+T+ATIPMQSSENALTVRVVTLFNTTT+ NE+LLAIGTAY+QGEDVAARGRV+L S+
Sbjct: 901  GPWETKATIPMQSSENALTVRVVTLFNTTTKENESLLAIGTAYIQGEDVAARGRVILCSI 960

Query: 179  EKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWTGSELNGVAFYD 6
             +N+DN+Q  VSEVYSKELKGAISALASLQGHLL+ASGPKIILH WTGSELNG+AFYD
Sbjct: 961  GRNTDNLQNLVSEVYSKELKGAISALASLQGHLLIASGPKIILHNWTGSELNGIAFYD 1018


>ref|XP_010662375.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X2 [Vitis vinifera]
          Length = 1301

 Score = 1456 bits (3770), Expect = 0.0
 Identities = 738/1031 (71%), Positives = 844/1031 (81%), Gaps = 10/1031 (0%)
 Frame = -3

Query: 3068 QPRCAAVLVYGLQMIVLKAAEASSGLVGEDSAFSSGPTGASRIESSYIFGLRDLDMKHVK 2889
            Q RC+ VLVYGLQMI+LKA++A  GLVG++ A SSG   ++R+ESSY+  LRDLDMKHVK
Sbjct: 188  QGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVISLRDLDMKHVK 247

Query: 2888 DFIFIHGYIEPVVVILHEQELTWAGRVSWKQHTCMISALSISTTLKQHPLIWSATNLPHD 2709
            DF F+HGYIEPV+VILHE+ELTWAGRVSWK HTCMISALSISTTLKQHPLIWSA NLPHD
Sbjct: 248  DFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHD 307

Query: 2708 AYKLLAVPSPIGGVLVIGANTIHYHSQSASCVLALNNFAVPVDGSQEMPRSGFTTELDAA 2529
            AYKLL VPSPIGGV+VI AN+IHYHSQSASC LALNN+AV  D SQEMPRS F+ ELDAA
Sbjct: 308  AYKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVSADNSQEMPRSSFSVELDAA 367

Query: 2528 NATWLTNDVAVFXXXXXXXXXXXLIYDGRIVQRLELSKSRASVLTSDITTIGNSLFFLGS 2349
            NATWL+NDVA+            L YDGR+V RL+LSKSRASVLTS I  IGNSLFFLGS
Sbjct: 368  NATWLSNDVAMLSTKTGELLLLTLAYDGRVVHRLDLSKSRASVLTSGIAAIGNSLFFLGS 427

Query: 2348 RLGDSLLVQYNSGVGAPTLTPGVKEEVGDIESDAPLTKRLRRSSSDALQDLV-GEELSFY 2172
            RLGDSLLVQ+ S      L+  VKEEVGDIE D P  KRLR+SSSDALQD+V GEELS Y
Sbjct: 428  RLGDSLLVQFTS-----ILSSSVKEEVGDIEGDVPSAKRLRKSSSDALQDMVNGEELSLY 482

Query: 2171 GTGPNNAQLAQKAFTFAVRDSLLNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGH 1992
            G+ PN+ + +QK F+F+VRDS +NVGPLKDF+YGLRINADP ATGIAKQSNYELVCCSGH
Sbjct: 483  GSAPNSTETSQKTFSFSVRDSFINVGPLKDFAYGLRINADPKATGIAKQSNYELVCCSGH 542

Query: 1991 GKNGALSVLQQSIRPDTITQESLPGCKGIWTVYHKNLR---SDSSKGAADEDEYHAYLII 1821
            GKNGAL +LQQSIRP+ IT+  LPGCKGIWTVYHKN R   +DS+K A  +DEYHAYLII
Sbjct: 543  GKNGALCILQQSIRPEMITEVELPGCKGIWTVYHKNTRGHNADSTKMATKDDEYHAYLII 602

Query: 1820 SLENRTMVLQTANNLEEVTENVDYYVQGSTIAAGNLFGRRRVIQIFARGARILDGAFMTQ 1641
            SLE+RTMVL+TA+ L EVTE+VDYYVQG TI+AGNLFGRRRV+Q++ARGARILDGAFMTQ
Sbjct: 603  SLESRTMVLETADLLGEVTESVDYYVQGCTISAGNLFGRRRVVQVYARGARILDGAFMTQ 662

Query: 1640 ELSFKXXXXXXXXXXXGTVVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFE 1461
            +L               + V SVSIADPYVLLRM+DG+IQLLVGDPSTC+VS+  P VFE
Sbjct: 663  DLPIS----------ESSTVLSVSIADPYVLLRMSDGNIQLLVGDPSTCTVSINIPAVFE 712

Query: 1460 SSDKVVSACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIXXXXXXXXXXXDVYCVLCYENG 1281
            SS K +SACTLYHDKGPEPWLRKTSTDAWLSTGIGEAI           D+YCV+ YE+G
Sbjct: 713  SSKKSISACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIDGADGAAQDQGDIYCVVSYESG 772

Query: 1280 NLEICDVPNXXXXXXXXXXXSGKNHILDTFSHGPANDPVKLMNKHS-EDVGHGRKEIPHN 1104
            +LEI DVPN           SG  H++DT    P+ D  K+M+K+S E+   GRKE  HN
Sbjct: 773  DLEIFDVPNFNCVFSVDKFMSGNAHLVDTLILEPSEDTQKVMSKNSEEEADQGRKENAHN 832

Query: 1103 MKVVELSMQRWEGEHSRPFLFGILSDGSILCYHAYIFEVSENASKA-EGVXXXXXXXXXX 927
            +KVVEL+MQRW G+HSRPFLFGIL+DG+ILCYHAY++E  E+  K  E V          
Sbjct: 833  IKVVELAMQRWSGQHSRPFLFGILTDGTILCYHAYLYEGPESTPKTEEAVSAQNSLSISN 892

Query: 926  XXXSRLKNLRFVRVALETYAREETPSGISSQRITIFKNVGGLQGLFLSGSRPVWFMMFRE 747
               SRL+NLRFVRV L+TY REE  SG +S R+T+FKN+GG QGLFLSGSRP+WFM+FRE
Sbjct: 893  VSASRLRNLRFVRVPLDTYTREEALSGTTSPRMTVFKNIGGCQGLFLSGSRPLWFMVFRE 952

Query: 746  RLRIHPQVCDGPIVAFTVLHNVNCNHGFIYITSEGALKICQLSALSSYDNHWPVQKIALK 567
            R+R+HPQ+CDG IVAFTVLHN+NCNHG IY+TS+G LKICQL A+SSYDN+WPVQKI LK
Sbjct: 953  RIRVHPQLCDGSIVAFTVLHNINCNHGLIYVTSQGFLKICQLPAVSSYDNYWPVQKIPLK 1012

Query: 566  GTPHQVTYFAEKNLYPLIVSVPVLKPLNQVLSSLIDQEVGNQFEHDM----SMEGTYLVE 399
            GTPHQVTYFAEKNLYPLIVSVPVLKPLN VLSSL+DQE G+Q E+D      +  +Y V+
Sbjct: 1013 GTPHQVTYFAEKNLYPLIVSVPVLKPLNHVLSSLVDQEAGHQLENDNLSSDELHRSYSVD 1072

Query: 398  EFEVRIMEPERSTGPWQTRATIPMQSSENALTVRVVTLFNTTTQRNETLLAIGTAYVQGE 219
            EFEVR++EPE+S  PWQTRATIPMQSSENALTVRVVTLFNTTT+ NETLLAIGTAYVQGE
Sbjct: 1073 EFEVRVLEPEKSGAPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYVQGE 1132

Query: 218  DVAARGRVLLYSVEKNSDNVQAQVSEVYSKELKGAISALASLQGHLLLASGPKIILHKWT 39
            DVAARGRVLL+SV KN+DN Q  VSE+YSKELKGAISA+ASLQGHLL+ASGPKIILHKWT
Sbjct: 1133 DVAARGRVLLFSVGKNTDNSQNLVSEIYSKELKGAISAVASLQGHLLIASGPKIILHKWT 1192

Query: 38   GSELNGVAFYD 6
            G+ELNGVAF+D
Sbjct: 1193 GTELNGVAFFD 1203