BLASTX nr result

ID: Rehmannia27_contig00032080 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00032080
         (661 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_057948498.1| hypothetical protein [Lysobacter enzymogenes...    64   2e-08
ref|WP_056114715.1| hypothetical protein [Lysobacter sp. Root690...    60   6e-07

>ref|WP_057948498.1| hypothetical protein [Lysobacter enzymogenes]
            gi|951304825|gb|ALN59062.1| peptidoglycan-binding LysM
            [Lysobacter enzymogenes]
          Length = 4828

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
 Frame = +1

Query: 1    GLFINYRAVSDEAFDAFHGSNRLAAY---RTPQEFLQNKLISWSDAFEGGVVNVHIRQST 171
            G  I Y +V D  FD  +GS++ A+Y       E + +KL+SW D F GG   V +R S 
Sbjct: 4708 GFKIQYVSVDDTLFDNLYGSDKFASYGIKNASDEVVIDKLLSWDDMF-GGPAVVRVRSSV 4766

Query: 172  LLSDRASVAALGHEYGELQTVFGRVGNGSYTIGKWDSFINGAHEQVVPKVD 324
              SDRA  A LGHE+ E+  +  R    +    +  S+I+  H   V   D
Sbjct: 4767 FESDRAITAVLGHEFFEISGLHNRTTKTAIYRSQTQSYIDQLHNLAVDFAD 4817


>ref|WP_056114715.1| hypothetical protein [Lysobacter sp. Root690]
            gi|946051649|gb|KRB04363.1| hypothetical protein
            ASD86_18795 [Lysobacter sp. Root690]
          Length = 3352

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1    GLFINYRAVSDEAFDAFHGSNRLAAYRTPQ--EFLQNKLISWSDAFEGGVVNVHIRQSTL 174
            GL + Y  V D  FD  +G  + A+Y T Q      NK++SW D F G +  V +RQS L
Sbjct: 3233 GLRVKYVIVEDGVFDKNYGVGKYASYETKQYPNLTHNKIMSWGDLF-GEMAVVRVRQSVL 3291

Query: 175  LSDRASVAALGHEYGELQTVFGR 243
             SDR   A  GHE+ EL+ +  +
Sbjct: 3292 NSDRKMTAIFGHEFHELRGIHAK 3314


Top