BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00031324
         (963 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012829550.1| PREDICTED: tRNA pseudouridine synthase A, mi...   196   2e-96
gb|EYU17545.1| hypothetical protein MIMGU_mgv1a003821mg [Erythra...   196   2e-96
ref|XP_011099813.1| PREDICTED: tRNA pseudouridine synthase A, mi...   197   8e-96
ref|XP_009778087.1| PREDICTED: tRNA pseudouridine synthase A, mi...   172   2e-80
ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mi...   166   7e-79
ref|XP_009589249.1| PREDICTED: tRNA pseudouridine synthase A, mi...   168   2e-78
emb|CDP07323.1| unnamed protein product [Coffea canephora]            169   8e-77
ref|XP_015074162.1| PREDICTED: tRNA pseudouridine synthase A, mi...   157   2e-76
ref|XP_004238400.1| PREDICTED: tRNA pseudouridine synthase A, mi...   157   3e-75
ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Popu...   167   1e-74
ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Popu...   167   1e-74
ref|XP_011003107.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   162   1e-73
ref|XP_010101290.1| tRNA pseudouridine synthase A [Morus notabil...   152   4e-73
gb|KYP72544.1| tRNA pseudouridine synthase 1 [Cajanus cajan]          163   4e-73
ref|XP_010539823.1| PREDICTED: tRNA pseudouridine synthase A, mi...   164   5e-73
ref|XP_010671485.1| PREDICTED: tRNA pseudouridine synthase A, mi...   154   9e-73
gb|KMT20568.1| hypothetical protein BVRB_1g005500 [Beta vulgaris...   154   9e-73
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr...   154   1e-72
ref|XP_002510619.1| PREDICTED: tRNA pseudouridine synthase A, mi...   156   2e-72
ref|XP_011034929.1| PREDICTED: tRNA pseudouridine synthase A, mi...   157   3e-72

>ref|XP_012829550.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Erythranthe guttata]
          Length = 594

 Score =  196 bits (497), Expect(2) = 2e-96
 Identities = 97/134 (72%), Positives = 111/134 (82%), Gaps = 7/134 (5%)
 Frame = +3

Query: 18  ENNIVVNSLDKGIDNTNNDNASPEPGKLSENGAEN-------RLECENANDDTKLEKKSE 176
           E+  VV+S +KGI+NT+ +N S E  KL E G E+       +LE ENAN  T+ EKKSE
Sbjct: 320 ESKTVVDSSEKGIENTDLENGSSETEKLLETGDESIEKRNVDKLESENANGHTEAEKKSE 379

Query: 177 FCYGEEEKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVK 356
           FCYGEEEK RFNRILK+YEGTHNFHNFTTRTKAEDPAA+RYILSFNANTV+++DGIDFVK
Sbjct: 380 FCYGEEEKARFNRILKFYEGTHNFHNFTTRTKAEDPAARRYILSFNANTVVNVDGIDFVK 439

Query: 357 CEVVGQSFMLHQIR 398
           CEVVGQSFMLHQIR
Sbjct: 440 CEVVGQSFMLHQIR 453



 Score =  186 bits (471), Expect(2) = 2e-96
 Identities = 87/129 (67%), Positives = 104/129 (80%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TAF Q V  NVPMAPEVGLYLDECFFSSYN+KWKD+HEE+SMK YAEE+E+FK KYIY H
Sbjct: 474 TAFLQSVRFNVPMAPEVGLYLDECFFSSYNNKWKDSHEEVSMKAYAEESEEFKMKYIYPH 533

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFADNDNAPSSDNAPSSDGRGNEVVDDCPSSDVK 811
           +AS+EHKDGAVALWLHSLNYRN+PDLR AD++        P SDG G E+V++C  SD+K
Sbjct: 534 VASSEHKDGAVALWLHSLNYRNFPDLRAADSE--------PVSDGNGTEIVNNCAGSDLK 585

Query: 812 QDEIKNMDE 838
             E  ++D+
Sbjct: 586 ATETVSIDQ 594


>gb|EYU17545.1| hypothetical protein MIMGU_mgv1a003821mg [Erythranthe guttata]
          Length = 562

 Score =  196 bits (497), Expect(2) = 2e-96
 Identities = 97/134 (72%), Positives = 111/134 (82%), Gaps = 7/134 (5%)
 Frame = +3

Query: 18  ENNIVVNSLDKGIDNTNNDNASPEPGKLSENGAEN-------RLECENANDDTKLEKKSE 176
           E+  VV+S +KGI+NT+ +N S E  KL E G E+       +LE ENAN  T+ EKKSE
Sbjct: 288 ESKTVVDSSEKGIENTDLENGSSETEKLLETGDESIEKRNVDKLESENANGHTEAEKKSE 347

Query: 177 FCYGEEEKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVK 356
           FCYGEEEK RFNRILK+YEGTHNFHNFTTRTKAEDPAA+RYILSFNANTV+++DGIDFVK
Sbjct: 348 FCYGEEEKARFNRILKFYEGTHNFHNFTTRTKAEDPAARRYILSFNANTVVNVDGIDFVK 407

Query: 357 CEVVGQSFMLHQIR 398
           CEVVGQSFMLHQIR
Sbjct: 408 CEVVGQSFMLHQIR 421



 Score =  186 bits (471), Expect(2) = 2e-96
 Identities = 87/129 (67%), Positives = 104/129 (80%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TAF Q V  NVPMAPEVGLYLDECFFSSYN+KWKD+HEE+SMK YAEE+E+FK KYIY H
Sbjct: 442 TAFLQSVRFNVPMAPEVGLYLDECFFSSYNNKWKDSHEEVSMKAYAEESEEFKMKYIYPH 501

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFADNDNAPSSDNAPSSDGRGNEVVDDCPSSDVK 811
           +AS+EHKDGAVALWLHSLNYRN+PDLR AD++        P SDG G E+V++C  SD+K
Sbjct: 502 VASSEHKDGAVALWLHSLNYRNFPDLRAADSE--------PVSDGNGTEIVNNCAGSDLK 553

Query: 812 QDEIKNMDE 838
             E  ++D+
Sbjct: 554 ATETVSIDQ 562


>ref|XP_011099813.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Sesamum indicum]
          Length = 568

 Score =  197 bits (502), Expect(2) = 8e-96
 Identities = 97/129 (75%), Positives = 109/129 (84%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TAF Q VNINVPMAPEVGLYLDECFFSSYN KWKD+HEELSMK YA+EAE+FK KYIY+H
Sbjct: 449 TAFRQTVNINVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYADEAEEFKMKYIYTH 508

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFADNDNAPSSDNAPSSDGRGNEVVDDCPSSDVK 811
           IAS EHKDG VALWLHSLNYRNYPDLR        ++D+AP+S+   NEVVD+CPSSD K
Sbjct: 509 IASTEHKDGVVALWLHSLNYRNYPDLR--------AADSAPTSNVHENEVVDNCPSSD-K 559

Query: 812 QDEIKNMDE 838
           ++EI NMDE
Sbjct: 560 RNEIVNMDE 568



 Score =  182 bits (461), Expect(2) = 8e-96
 Identities = 96/133 (72%), Positives = 103/133 (77%), Gaps = 5/133 (3%)
 Frame = +3

Query: 15  VENNIVVNSLDKGIDNTNN-DNASPEPGKLSENGAEN---RLECE-NANDDTKLEKKSEF 179
           VE  IVV S +   D  +   NAS E G   E G E+    +E E NAN     EKKSEF
Sbjct: 296 VEKRIVVTSSENRNDGADGVKNASSETGNTRETGPEDIEKMMEFEKNANGHETSEKKSEF 355

Query: 180 CYGEEEKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVKC 359
           CYGEEEKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANT++S+DGIDFVKC
Sbjct: 356 CYGEEEKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTIVSVDGIDFVKC 415

Query: 360 EVVGQSFMLHQIR 398
           EVVGQSFMLHQIR
Sbjct: 416 EVVGQSFMLHQIR 428


>ref|XP_009778087.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Nicotiana
           sylvestris]
          Length = 596

 Score =  172 bits (435), Expect(2) = 2e-80
 Identities = 86/124 (69%), Positives = 96/124 (77%), Gaps = 1/124 (0%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TAF + VNINVPMAPEVGLYLDECFF+SYNSKWKDTHEE+S+K Y E AE+FK KYIYSH
Sbjct: 397 TAFRRDVNINVPMAPEVGLYLDECFFTSYNSKWKDTHEEVSLKAYTEAAEEFKMKYIYSH 456

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFADNDNAPSSDNAPSSDG-RGNEVVDDCPSSDV 808
           IAS EHKDG +ALWLHSLNYRNYPDLR  DNDN     +A +SDG +  E V +     V
Sbjct: 457 IASTEHKDGTMALWLHSLNYRNYPDLRGVDNDN-----SAGASDGSKAIEAVVEAGIGAV 511

Query: 809 KQDE 820
           K  E
Sbjct: 512 KNGE 515



 Score =  156 bits (394), Expect(2) = 2e-80
 Identities = 78/133 (58%), Positives = 100/133 (75%), Gaps = 4/133 (3%)
 Frame = +3

Query: 12  SVENNIVVNSLDKGIDNTNNDNASPEPGKLSENGAENRLECENANDDTKL----EKKSEF 179
           ++E+N+ VN+ D     T ++        LSE G E + E E  +++ K      ++S F
Sbjct: 247 NIESNVNVNANDV---ITESNMVIENGASLSEKGEETKEEVEKGDENAKAIEEQVEESVF 303

Query: 180 CYGEEEKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVKC 359
            YGE+EKERFNRILKYYEGTHNFHNFTTRTKA+DPAAKRYI+SF ANT+++++GI+FVKC
Sbjct: 304 SYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFTANTIVNVEGIEFVKC 363

Query: 360 EVVGQSFMLHQIR 398
           EVVGQSFMLHQIR
Sbjct: 364 EVVGQSFMLHQIR 376


>ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Solanum
           tuberosum]
          Length = 569

 Score =  166 bits (419), Expect(2) = 7e-79
 Identities = 84/135 (62%), Positives = 103/135 (76%), Gaps = 3/135 (2%)
 Frame = +3

Query: 3   KAVSVENNIVVNSLDKGIDNTNNDNASPEPGKLSENGAENRLECENANDDTKLEKKSE-- 176
           ++V + +  VVN+ D     T+ +        LSE   E   E E +N++ K+E++ E  
Sbjct: 223 QSVIIVDAPVVNANDP---TTDTNMVIENEASLSEKVEERNGEVEGSNENAKMEEQVEES 279

Query: 177 -FCYGEEEKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFV 353
            FCYGE+EKERFNRILKYYEGTHNFHNFTTRTKA+DPAAKRYI+SFNANTV+++DGIDFV
Sbjct: 280 VFCYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFNANTVVNVDGIDFV 339

Query: 354 KCEVVGQSFMLHQIR 398
           KCEVVGQSFMLHQIR
Sbjct: 340 KCEVVGQSFMLHQIR 354



 Score =  157 bits (397), Expect(2) = 7e-79
 Identities = 71/90 (78%), Positives = 80/90 (88%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TAF + VNINVPMAPEVGLYLDECFF+SYNSKWKDTHEE+S+K Y EEAE+FK KYIYSH
Sbjct: 375 TAFRRDVNINVPMAPEVGLYLDECFFTSYNSKWKDTHEEVSLKAYLEEAEEFKMKYIYSH 434

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFAD 721
           IAS E K+G +A+WLHSLN+RNYPDLR  D
Sbjct: 435 IASTEQKEGTMAVWLHSLNHRNYPDLRAVD 464


>ref|XP_009589249.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Nicotiana tomentosiformis]
          Length = 596

 Score =  168 bits (426), Expect(2) = 2e-78
 Identities = 84/124 (67%), Positives = 95/124 (76%), Gaps = 1/124 (0%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TAF + VNINVPMAPEVGLYLDECFF+SYNSKWKDTHEE+S+K Y+E AE+FK KYIYSH
Sbjct: 397 TAFRRDVNINVPMAPEVGLYLDECFFTSYNSKWKDTHEEVSLKAYSEAAEEFKMKYIYSH 456

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFADNDNAPSSDNAPSSDG-RGNEVVDDCPSSDV 808
           IAS EHKDG +ALWLHSLNYRNYPDLR  DN N     +A + DG +  E V +     V
Sbjct: 457 IASTEHKDGTMALWLHSLNYRNYPDLRAVDNGN-----SAGAGDGSKAVEAVVEAGVGAV 511

Query: 809 KQDE 820
           K  E
Sbjct: 512 KNGE 515



 Score =  153 bits (387), Expect(2) = 2e-78
 Identities = 77/130 (59%), Positives = 97/130 (74%), Gaps = 1/130 (0%)
 Frame = +3

Query: 12  SVENNIVVNSLDKGID-NTNNDNASPEPGKLSENGAENRLECENANDDTKLEKKSEFCYG 188
           + E+N+ VN+ D   + N   +N +    K+ E   E     ENA    +  ++S FCYG
Sbjct: 247 NTESNVNVNANDVITESNMVIENGASVSEKVEETKEEVEKGDENAKTVEEQVEESVFCYG 306

Query: 189 EEEKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVKCEVV 368
           E+EKERFNRILKYYEGTHNFHNFTTRTKA+DPAAKRYI+SF ANT+++++ I+FVKCEVV
Sbjct: 307 EKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFTANTIVNVESIEFVKCEVV 366

Query: 369 GQSFMLHQIR 398
           GQSFMLHQIR
Sbjct: 367 GQSFMLHQIR 376


>emb|CDP07323.1| unnamed protein product [Coffea canephora]
          Length = 423

 Score =  169 bits (427), Expect(2) = 8e-77
 Identities = 77/92 (83%), Positives = 84/92 (91%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TAF Q V+INVPMAPEVGLYLDECFFSSYN KWKD+HEELSM+ YAEEAEDFK +YIYSH
Sbjct: 315 TAFRQDVDINVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMQTYAEEAEDFKMQYIYSH 374

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFADND 727
           IAS EHK+G VALWLHSLNYRNYPDLRF +N+
Sbjct: 375 IASTEHKEGVVALWLHSLNYRNYPDLRFINNN 406



 Score =  147 bits (371), Expect(2) = 8e-77
 Identities = 73/135 (54%), Positives = 96/135 (71%), Gaps = 13/135 (9%)
 Frame = +3

Query: 33  VNSLDKGIDNTNNDNASPEP------------GKLSENGAENRLECENAN-DDTKLEKKS 173
           V  L+ GI + N D  + E             G   E   E+ +  ++ N ++ K  KKS
Sbjct: 160 VGKLESGISSNNQDAGTTEEKIKDFSLGANNGGFDIEKTEEDEVLVQDVNQEEVKAIKKS 219

Query: 174 EFCYGEEEKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFV 353
           +F YGEEE+ERFNR+L+YY+GTHNFHNFTTRTKAEDPAA+RYI+SF+A T ++++GI+FV
Sbjct: 220 DFRYGEEERERFNRVLQYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVNVEGIEFV 279

Query: 354 KCEVVGQSFMLHQIR 398
           KCEV+GQSFMLHQIR
Sbjct: 280 KCEVIGQSFMLHQIR 294


>ref|XP_015074162.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Solanum
           pennellii]
          Length = 605

 Score =  157 bits (398), Expect(2) = 2e-76
 Identities = 71/90 (78%), Positives = 80/90 (88%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TAF + VNINVPMAPEVGLYLDECFF+SYNSKWKDTHEE+S+K Y EEAE+FK KYIYSH
Sbjct: 381 TAFRRDVNINVPMAPEVGLYLDECFFTSYNSKWKDTHEEVSLKAYLEEAEEFKVKYIYSH 440

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFAD 721
           IAS E K+G +A+WLHSLN+RNYPDLR  D
Sbjct: 441 IASTEQKEGTMAVWLHSLNHRNYPDLRAVD 470



 Score =  157 bits (397), Expect(2) = 2e-76
 Identities = 81/133 (60%), Positives = 102/133 (76%), Gaps = 1/133 (0%)
 Frame = +3

Query: 3   KAVSVENNIVVNSLDKGID-NTNNDNASPEPGKLSENGAENRLECENANDDTKLEKKSEF 179
           ++V + +  VVN+ D   D N   +N +    K+ E   E     ENA  + ++E+ S F
Sbjct: 229 QSVIIVDAPVVNANDPTTDTNMIIENEASLSEKVEERIDEVERSDENAKKEEQVEE-SVF 287

Query: 180 CYGEEEKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVKC 359
           CYGE+EKERFNRILKY+EGTHNFHNFTTRTKA+DPAAKR+I+SFNANTV+++DGIDFVKC
Sbjct: 288 CYGEKEKERFNRILKYFEGTHNFHNFTTRTKADDPAAKRFIISFNANTVVNVDGIDFVKC 347

Query: 360 EVVGQSFMLHQIR 398
           EV+GQSFMLHQIR
Sbjct: 348 EVIGQSFMLHQIR 360


>ref|XP_004238400.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Solanum
           lycopersicum]
          Length = 598

 Score =  157 bits (398), Expect(2) = 3e-75
 Identities = 71/90 (78%), Positives = 80/90 (88%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TAF + VNINVPMAPEVGLYLDECFF+SYNSKWKDTHEE+S+K Y EEAE+FK KYIYSH
Sbjct: 374 TAFRRDVNINVPMAPEVGLYLDECFFTSYNSKWKDTHEEVSLKAYLEEAEEFKVKYIYSH 433

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFAD 721
           IAS E K+G +A+WLHSLN+RNYPDLR  D
Sbjct: 434 IASTEQKEGTMAVWLHSLNHRNYPDLRAVD 463



 Score =  153 bits (387), Expect(2) = 3e-75
 Identities = 77/118 (65%), Positives = 93/118 (78%), Gaps = 4/118 (3%)
 Frame = +3

Query: 57  DNTNNDNASPE-PGKLSENGAENRLECENANDDTKLEKKSE---FCYGEEEKERFNRILK 224
           D T + N   E    LSE   E     E ++++ K E++ E   FCYGE+EKERFNRILK
Sbjct: 236 DPTTDTNMIIENEASLSEKVEERIDVVERSDENAKKEEQVEESVFCYGEKEKERFNRILK 295

Query: 225 YYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIR 398
           Y+EGTHNFHNFTTRTKA+DPAAKR+I+SFNANTV+++DGIDFVKCEV+GQSFMLHQIR
Sbjct: 296 YFEGTHNFHNFTTRTKADDPAAKRFIISFNANTVVNVDGIDFVKCEVIGQSFMLHQIR 353


>ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Populus trichocarpa]
           gi|550344062|gb|EEE79946.2| hypothetical protein
           POPTR_0002s01580g [Populus trichocarpa]
          Length = 516

 Score =  167 bits (423), Expect(2) = 1e-74
 Identities = 79/117 (67%), Positives = 92/117 (78%), Gaps = 1/117 (0%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TA ++ VNINVP APEVGLYLDECFF+SYN KWKD+HEE+SMKDY EEAEDFK K+IYSH
Sbjct: 399 TALQKDVNINVPTAPEVGLYLDECFFTSYNQKWKDSHEEISMKDYEEEAEDFKMKHIYSH 458

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFADN-DNAPSSDNAPSSDGRGNEVVDDCPS 799
           IA+ EHK+G+VALWLHSLN+RNYPDLR ++  DN  S DN    +  G E    C S
Sbjct: 459 IATTEHKEGSVALWLHSLNHRNYPDLRVSNTVDNNNSEDNKNGKESTGFENTAPCTS 515



 Score =  142 bits (357), Expect(2) = 1e-74
 Identities = 69/124 (55%), Positives = 94/124 (75%), Gaps = 5/124 (4%)
 Frame = +3

Query: 42  LDKGIDNTNNDNASPEPGKLSENGAENRLECENANDDT-----KLEKKSEFCYGEEEKER 206
           + + + ++N+++A+  P    E+  E  +  EN +D+      ++ K S FCYGE+EKER
Sbjct: 259 MPESVISSNSEDANVNP----ESKDEIIVSVENGDDEKTKSKEEMVKGSSFCYGEKEKER 314

Query: 207 FNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVKCEVVGQSFML 386
           FNRIL YY G+HNFHNFTTRTKAEDP+A+RYI+SF A T ++++GI+FVKCEVVGQSFML
Sbjct: 315 FNRILGYYVGSHNFHNFTTRTKAEDPSARRYIVSFEAKTTVNVEGIEFVKCEVVGQSFML 374

Query: 387 HQIR 398
           HQIR
Sbjct: 375 HQIR 378


>ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
           gi|550339814|gb|EEE94755.2| hypothetical protein
           POPTR_0005s26830g [Populus trichocarpa]
          Length = 497

 Score =  167 bits (424), Expect(2) = 1e-74
 Identities = 80/114 (70%), Positives = 95/114 (83%), Gaps = 1/114 (0%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TA ++ VNINVP APEVGLYLDECFF+SYN KWKD+HEELSMKDY EEAE+FK K+IYSH
Sbjct: 386 TALQKNVNINVPTAPEVGLYLDECFFTSYNQKWKDSHEELSMKDYEEEAEEFKMKHIYSH 445

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFADN-DNAPSSDNAPSSDGRGNEVVDD 790
           IA+ EHK+G+VALWLHSLN+RNYPDLR  DN DN  S DN    +GR + +V++
Sbjct: 446 IATTEHKEGSVALWLHSLNHRNYPDLRACDNGDNITSEDN----NGRESTMVEN 495



 Score =  141 bits (356), Expect(2) = 1e-74
 Identities = 69/113 (61%), Positives = 87/113 (76%)
 Frame = +3

Query: 60  NTNNDNASPEPGKLSENGAENRLECENANDDTKLEKKSEFCYGEEEKERFNRILKYYEGT 239
           N+ + NA+PE         EN  + +N   + +  K S FCYGE+EKERFNRIL YY G+
Sbjct: 254 NSEDANANPEIKDEIMVSIENG-DDKNTKSEEEAIKGSGFCYGEKEKERFNRILNYYLGS 312

Query: 240 HNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIR 398
           HNFHNFTTRTKAEDP+A+RYI+SF+A T ++++GI+FVKCEVVGQSFMLHQIR
Sbjct: 313 HNFHNFTTRTKAEDPSAQRYIISFDAKTTVAVEGIEFVKCEVVGQSFMLHQIR 365


>ref|XP_011003107.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
           mitochondrial [Populus euphratica]
          Length = 538

 Score =  162 bits (410), Expect(2) = 1e-73
 Identities = 76/109 (69%), Positives = 86/109 (78%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TA ++ VNINVP APEVGLYLDECFF+SYN KWKD+HEELSMKDY EEAE+FK ++IYSH
Sbjct: 423 TALQKNVNINVPTAPEVGLYLDECFFTSYNQKWKDSHEELSMKDYEEEAEEFKMQHIYSH 482

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFADNDNAPSSDNAPSSDGRGNE 778
           IA+ EHK+G+VALWLHSLNY NYPDLR  DN      DN    D  G E
Sbjct: 483 IATTEHKEGSVALWLHSLNYXNYPDLRVCDN-----GDNITIEDKNGRE 526



 Score =  143 bits (360), Expect(2) = 1e-73
 Identities = 71/119 (59%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
 Frame = +3

Query: 45  DKGIDNTNND-NASPEPGKLSENGAENRLECENANDDTKLEKKSEFCYGEEEKERFNRIL 221
           + GI + + D NA+PE         EN  + +N   + +  K S FCYGE+EKERFNRIL
Sbjct: 285 ESGISSNSEDANANPEIKDEMMVSIENG-DDKNTKSEEEAIKGSGFCYGEKEKERFNRIL 343

Query: 222 KYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIR 398
            YY G+HNFHNFTTRTKAEDP+A+RYI+SF+A T ++++GI+FVKCEVVGQSFMLHQIR
Sbjct: 344 NYYVGSHNFHNFTTRTKAEDPSAQRYIISFDAKTTVTVEGIEFVKCEVVGQSFMLHQIR 402


>ref|XP_010101290.1| tRNA pseudouridine synthase A [Morus notabilis]
           gi|587899845|gb|EXB88225.1| tRNA pseudouridine synthase
           A [Morus notabilis]
          Length = 621

 Score =  152 bits (385), Expect(2) = 4e-73
 Identities = 77/127 (60%), Positives = 93/127 (73%), Gaps = 9/127 (7%)
 Frame = +3

Query: 45  DKGIDNTNNDN-ASPEPGKLSENGAENRL--------ECENANDDTKLEKKSEFCYGEEE 197
           + G+ + N D     E G    N  E R         E  N N + K EK+S+F YGE+E
Sbjct: 368 ENGVASVNGDGEVKVENGDSETNQVEGRTLDNEVSTGEEGNVNGEQKPEKRSDFSYGEKE 427

Query: 198 KERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVKCEVVGQS 377
           +ERFNRILK+YEGTHNFHNFTTRTKAEDPAA+R+I+SFNANTVI ++G++FVKCEVVGQS
Sbjct: 428 RERFNRILKHYEGTHNFHNFTTRTKAEDPAAQRFIISFNANTVIPVEGMEFVKCEVVGQS 487

Query: 378 FMLHQIR 398
           FMLHQIR
Sbjct: 488 FMLHQIR 494



 Score =  151 bits (381), Expect(2) = 4e-73
 Identities = 67/98 (68%), Positives = 80/98 (81%)
 Frame = +2

Query: 455 AFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHI 634
           A ++ VNIN+P APEVGLYLDEC FSSYN KWKD+HEE+SMK YAEEAE+FK K+IYSHI
Sbjct: 516 ALQKDVNINIPTAPEVGLYLDECLFSSYNKKWKDSHEEMSMKAYAEEAEEFKMKHIYSHI 575

Query: 635 ASAEHKDGAVALWLHSLNYRNYPDLRFADNDNAPSSDN 748
              E K+G VALWLHSLNYRNYPD +  DN N  ++++
Sbjct: 576 GLTEQKEGVVALWLHSLNYRNYPDFQAVDNKNTTNNNS 613


>gb|KYP72544.1| tRNA pseudouridine synthase 1 [Cajanus cajan]
          Length = 584

 Score =  163 bits (412), Expect(2) = 4e-73
 Identities = 77/121 (63%), Positives = 91/121 (75%)
 Frame = +2

Query: 455 AFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHI 634
           AF+Q VNINVP APEVGLYLDECFFSSYN KWKD+HEELSMKDY +EAE+FK KYIYSHI
Sbjct: 398 AFQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKDYEKEAEEFKMKYIYSHI 457

Query: 635 ASAEHKDGAVALWLHSLNYRNYPDLRFADNDNAPSSDNAPSSDGRGNEVVDDCPSSDVKQ 814
           +S E K+G VALWLHSLN+RNYPDLR  + +  P ++ A        E + D   +D+  
Sbjct: 458 SSTEQKEGTVALWLHSLNHRNYPDLRIVNEEAIPDNNRADI-----EEAIPDNKRADIVN 512

Query: 815 D 817
           D
Sbjct: 513 D 513



 Score =  140 bits (354), Expect(2) = 4e-73
 Identities = 64/91 (70%), Positives = 77/91 (84%)
 Frame = +3

Query: 126 LECENANDDTKLEKKSEFCYGEEEKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYIL 305
           LE E  N + +    S FCYGE+E+ERFN+ILKY+ GTHNFHNFTTRTKAEDPAA+RYI+
Sbjct: 286 LEEEKVNGEDESTNGSGFCYGEKERERFNKILKYFVGTHNFHNFTTRTKAEDPAARRYII 345

Query: 306 SFNANTVISIDGIDFVKCEVVGQSFMLHQIR 398
           SFNAN  + ++G++FVKCEVVGQSFMLHQIR
Sbjct: 346 SFNANITLVVEGMEFVKCEVVGQSFMLHQIR 376


>ref|XP_010539823.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Tarenaya
           hassleriana]
          Length = 570

 Score =  164 bits (416), Expect(2) = 5e-73
 Identities = 78/103 (75%), Positives = 91/103 (88%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TAF + VNINVPMAPEVGLYLDECFF+SY++KWKD+HEE+SMK YAEEAE+FK KYIY+H
Sbjct: 455 TAFRKDVNINVPMAPEVGLYLDECFFTSYSNKWKDSHEEVSMKAYAEEAEEFKMKYIYTH 514

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFADNDNAPSSDNAPSS 760
           IASAE KDGAVALWLHSLNYRNYPDLR ++  +A  + NA +S
Sbjct: 515 IASAERKDGAVALWLHSLNYRNYPDLR-SEQASASKNGNAETS 556



 Score =  139 bits (349), Expect(2) = 5e-73
 Identities = 68/105 (64%), Positives = 83/105 (79%), Gaps = 1/105 (0%)
 Frame = +3

Query: 87  EPGKLSENGAENRLECENANDDTKLEK-KSEFCYGEEEKERFNRILKYYEGTHNFHNFTT 263
           + G L E+G         + D+ K+    ++F YGE+EKERFNRIL YY G+HNFHNFTT
Sbjct: 338 DEGSLKESGT--------SVDEEKIGMLNNKFSYGEKEKERFNRILNYYIGSHNFHNFTT 389

Query: 264 RTKAEDPAAKRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIR 398
           RTKAEDPAA R+I+SFNANT++++DGIDFVKCEVVGQSFMLHQIR
Sbjct: 390 RTKAEDPAAHRFIVSFNANTIVNVDGIDFVKCEVVGQSFMLHQIR 434


>ref|XP_010671485.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Beta
           vulgaris subsp. vulgaris]
          Length = 654

 Score =  154 bits (390), Expect(2) = 9e-73
 Identities = 73/109 (66%), Positives = 85/109 (77%)
 Frame = +2

Query: 455 AFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHI 634
           AF+Q   INVP APEVGLYLDECFF+SYN+KWK+THEELSMKDYAEEAE+FK KYIYSH+
Sbjct: 430 AFDQDFKINVPTAPEVGLYLDECFFTSYNNKWKNTHEELSMKDYAEEAEEFKMKYIYSHV 489

Query: 635 ASAEHKDGAVALWLHSLNYRNYPDLRFADNDNAPSSDNAPSSDGRGNEV 781
              E K+G+VA+WLHSLN+RNYPDLR+  ND      N       G+EV
Sbjct: 490 GKTEDKEGSVAVWLHSLNHRNYPDLRY-PNDEVEKLANDEVEKLAGDEV 537



 Score =  148 bits (373), Expect(2) = 9e-73
 Identities = 76/114 (66%), Positives = 90/114 (78%), Gaps = 6/114 (5%)
 Frame = +3

Query: 75  NASPEPGKL------SENGAENRLECENANDDTKLEKKSEFCYGEEEKERFNRILKYYEG 236
           N+  EP K+      SEN A+N +  E A+     E KS+F YGEEEK+RFNRILK+YEG
Sbjct: 299 NSVEEPLKVDVSMVDSENFADNNVVSEEASK----EIKSDFKYGEEEKKRFNRILKHYEG 354

Query: 237 THNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIR 398
           THNFHNFTTRTKAEDP+AKRYI+SF ANT  +I+GI+FVKCEV+GQSFMLHQIR
Sbjct: 355 THNFHNFTTRTKAEDPSAKRYIVSFEANTTFTIEGIEFVKCEVIGQSFMLHQIR 408


>gb|KMT20568.1| hypothetical protein BVRB_1g005500 [Beta vulgaris subsp. vulgaris]
          Length = 635

 Score =  154 bits (390), Expect(2) = 9e-73
 Identities = 73/109 (66%), Positives = 85/109 (77%)
 Frame = +2

Query: 455 AFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHI 634
           AF+Q   INVP APEVGLYLDECFF+SYN+KWK+THEELSMKDYAEEAE+FK KYIYSH+
Sbjct: 411 AFDQDFKINVPTAPEVGLYLDECFFTSYNNKWKNTHEELSMKDYAEEAEEFKMKYIYSHV 470

Query: 635 ASAEHKDGAVALWLHSLNYRNYPDLRFADNDNAPSSDNAPSSDGRGNEV 781
              E K+G+VA+WLHSLN+RNYPDLR+  ND      N       G+EV
Sbjct: 471 GKTEDKEGSVAVWLHSLNHRNYPDLRY-PNDEVEKLANDEVEKLAGDEV 518



 Score =  148 bits (373), Expect(2) = 9e-73
 Identities = 76/114 (66%), Positives = 90/114 (78%), Gaps = 6/114 (5%)
 Frame = +3

Query: 75  NASPEPGKL------SENGAENRLECENANDDTKLEKKSEFCYGEEEKERFNRILKYYEG 236
           N+  EP K+      SEN A+N +  E A+     E KS+F YGEEEK+RFNRILK+YEG
Sbjct: 280 NSVEEPLKVDVSMVDSENFADNNVVSEEASK----EIKSDFKYGEEEKKRFNRILKHYEG 335

Query: 237 THNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIR 398
           THNFHNFTTRTKAEDP+AKRYI+SF ANT  +I+GI+FVKCEV+GQSFMLHQIR
Sbjct: 336 THNFHNFTTRTKAEDPSAKRYIVSFEANTTFTIEGIEFVKCEVIGQSFMLHQIR 389


>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
           gi|557537401|gb|ESR48519.1| hypothetical protein
           CICLE_v10000838mg [Citrus clementina]
          Length = 526

 Score =  154 bits (388), Expect(2) = 1e-72
 Identities = 70/94 (74%), Positives = 79/94 (84%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TA ++ VNINVP APEVGLYLDEC F+SYN KWKD+HEELSMK Y EEAE+FK K+I+SH
Sbjct: 430 TALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEEAENFKMKHIFSH 489

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFADNDNA 733
           IA  E K+G VALWLHSLNYRNYPDLRF  ND +
Sbjct: 490 IARTEQKEGVVALWLHSLNYRNYPDLRFLGNDES 523



 Score =  148 bits (374), Expect(2) = 1e-72
 Identities = 73/129 (56%), Positives = 95/129 (73%)
 Frame = +3

Query: 12  SVENNIVVNSLDKGIDNTNNDNASPEPGKLSENGAENRLECENANDDTKLEKKSEFCYGE 191
           SV   +V +   + + N N D +     K   N ++   E  + N + KL K S FCYGE
Sbjct: 284 SVNETLVESRTSETVQNENTDLSLDLDSK---NDSKVMAEERSVNGEEKLLKGSGFCYGE 340

Query: 192 EEKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVKCEVVG 371
           EEK+RFNRILK+Y G+HNFHNFTTRTKAEDP+A+RYI+SF A++V++++GIDF+KCEVVG
Sbjct: 341 EEKKRFNRILKHYVGSHNFHNFTTRTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVG 400

Query: 372 QSFMLHQIR 398
           QSFMLHQIR
Sbjct: 401 QSFMLHQIR 409


>ref|XP_002510619.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Ricinus
           communis] gi|223551320|gb|EEF52806.1| pseudouridylate
           synthase, putative [Ricinus communis]
          Length = 584

 Score =  156 bits (395), Expect(2) = 2e-72
 Identities = 80/133 (60%), Positives = 92/133 (69%), Gaps = 6/133 (4%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TA ++ V INVP APEVGLYLDECFF+SYN KWKD HEEL MKDY E AEDFK KYIYSH
Sbjct: 442 TALQKDVKINVPTAPEVGLYLDECFFTSYNQKWKD-HEELCMKDYEEVAEDFKMKYIYSH 500

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFA---DNDNAPSSDNAPSSDGRGNEVVDDCPSS 802
           IAS E K+G V LWLHSLNYRNYPDLRF    D +N  S++   + D    E   +  S 
Sbjct: 501 IASTEQKEGVVGLWLHSLNYRNYPDLRFCYTLDANNEKSTEVVNNGDANSEESAQEKNSE 560

Query: 803 DV---KQDEIKNM 832
           D    K  +++NM
Sbjct: 561 DADVEKNGKVENM 573



 Score =  145 bits (366), Expect(2) = 2e-72
 Identities = 71/132 (53%), Positives = 95/132 (71%)
 Frame = +3

Query: 3   KAVSVENNIVVNSLDKGIDNTNNDNASPEPGKLSENGAENRLECENANDDTKLEKKSEFC 182
           K+ S +  ++V+  +   D  N ++ + E    +  G E        N +  + K SEFC
Sbjct: 298 KSDSKQEEVMVS--EDAADGGNKESETMEKDSKASVGEER------VNGEEHVMKGSEFC 349

Query: 183 YGEEEKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVKCE 362
           YGEEEKE+FNRILKYY G+HNFHNFTTRTKAEDP+A+RYI+SF+A T ++++GI+FVKCE
Sbjct: 350 YGEEEKEKFNRILKYYVGSHNFHNFTTRTKAEDPSAQRYIISFDARTTVTVEGIEFVKCE 409

Query: 363 VVGQSFMLHQIR 398
           V+GQSFMLHQIR
Sbjct: 410 VIGQSFMLHQIR 421


>ref|XP_011034929.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Populus
           euphratica]
          Length = 534

 Score =  157 bits (398), Expect(2) = 3e-72
 Identities = 75/117 (64%), Positives = 89/117 (76%), Gaps = 1/117 (0%)
 Frame = +2

Query: 452 TAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSH 631
           TA ++ VNINVP APEVGLYLDEC F+SYN KWKD+HEE+SMKDY EEAEDFK K+IYSH
Sbjct: 417 TALQKDVNINVPTAPEVGLYLDECLFTSYNKKWKDSHEEISMKDYEEEAEDFKMKHIYSH 476

Query: 632 IASAEHKDGAVALWLHSLNYRNYPDLRFADN-DNAPSSDNAPSSDGRGNEVVDDCPS 799
           IA+ EHK+G+V+LWLHSLN RNYPDLR ++  D+  S DN    +    E    C S
Sbjct: 477 IATTEHKEGSVSLWLHSLNQRNYPDLRVSNTVDDNTSEDNNNGKESTKFENAAPCTS 533



 Score =  143 bits (361), Expect(2) = 3e-72
 Identities = 73/132 (55%), Positives = 91/132 (68%)
 Frame = +3

Query: 3   KAVSVENNIVVNSLDKGIDNTNNDNASPEPGKLSENGAENRLECENANDDTKLEKKSEFC 182
           K+V  E  I  NS D  ++  N D          ENG +     E      ++ K+S FC
Sbjct: 274 KSVMPEPVIPSNSEDANVNTENKDEIIVSV----ENGDD-----EKTKSKEEMVKRSRFC 324

Query: 183 YGEEEKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGIDFVKCE 362
           YGE+EKERFNRIL YY G+HNFHNFTTRTKAEDP+A+RY++SF A T ++++GI+FVKCE
Sbjct: 325 YGEKEKERFNRILGYYVGSHNFHNFTTRTKAEDPSARRYMVSFEAKTTVNVEGIEFVKCE 384

Query: 363 VVGQSFMLHQIR 398
           VVGQSFMLHQIR
Sbjct: 385 VVGQSFMLHQIR 396