BLASTX nr result

ID: Rehmannia27_contig00030968 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00030968
         (932 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011098709.1| PREDICTED: pentatricopeptide repeat-containi...   195   3e-54
ref|XP_012851374.1| PREDICTED: pentatricopeptide repeat-containi...    96   2e-18

>ref|XP_011098709.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290
           [Sesamum indicum]
          Length = 611

 Score =  195 bits (496), Expect = 3e-54
 Identities = 96/170 (56%), Positives = 116/170 (68%), Gaps = 13/170 (7%)
 Frame = -1

Query: 518 MIMADILNSLPACSISMYRNSRKTHMYCCSRRHDFRIHFQCISCSAYFNWGLKRKMGCAK 339
           M+M ++LN+ PACSISMYRNS +TH +CCSRRHD R H +CI CSAY +W L  KM CAK
Sbjct: 1   MVMVEMLNNPPACSISMYRNSHQTHWFCCSRRHDLRTHLKCIGCSAYLSWRLNIKMNCAK 60

Query: 338 NHGFGVVDLAERCSTWLGTGKWTIPKTRSLCNSIEIKSPCVM-------------EEEKI 198
           NH FGVV LAE  STWLGT K   P+    C SI IK+PC+M             +E + 
Sbjct: 61  NHVFGVVALAEGSSTWLGTPKQITPENFLSCKSIGIKTPCIMPNKVARLEFESDCDEGRT 120

Query: 197 PIFEGMEVFSENCPQQILPPWGNLSDQDLEEDENHLDNRSEISVKPIHET 48
           P+FEG E FSENCPQ ILPPWG+LSD++LE  +N+LD+    S K I ET
Sbjct: 121 PLFEGKEGFSENCPQHILPPWGDLSDEELEY-QNNLDDSLRRSTKTIDET 169


>ref|XP_012851374.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290
           [Erythranthe guttata]
          Length = 572

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 62/129 (48%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
 Frame = -1

Query: 446 HMY-CCSRRHDFRIHFQCISCSAYFNWGLKRKMGCAKNHGFGVVDLAERCSTWLGTGKWT 270
           +MY CCS RH+ R  FQ I+ SAYFNWGL+ KM CAKN    +    E+        K +
Sbjct: 9   NMYDCCSTRHNLRGDFQFIT-SAYFNWGLRTKMNCAKNQTSLLCKSVEQ-------RKDS 60

Query: 269 IPKTRSLCNSIEIKSPCVMEEEKIPIFEGMEVFSENCPQQILPPWGNLSDQDLEEDENHL 90
             K  S+  S+E  S C   EE  P FE  E FSEN  QQI PPWGNLS+QD  ED NH 
Sbjct: 61  SVKLSSVA-SLEFDSAC---EEGTPFFEENEAFSENHTQQISPPWGNLSNQD-SEDRNHF 115

Query: 89  DNRSEISVK 63
            +R ++S K
Sbjct: 116 ISRPKVSSK 124


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